gnu: Add r-variancepartition.
* gnu/packages/bioconductor.scm (r-variancepartition): New variable.
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		|  | @ -6006,3 +6006,44 @@ same genome coordinate system.") | |||
|      "This package is designed to conduct transcriptome analysis for tiling | ||||
| arrays based on fast wavelet-based functional models.") | ||||
|     (license license:gpl2+))) | ||||
| 
 | ||||
| (define-public r-variancepartition | ||||
|   (package | ||||
|     (name "r-variancepartition") | ||||
|     (version "1.14.0") | ||||
|     (source | ||||
|      (origin | ||||
|        (method url-fetch) | ||||
|        (uri (bioconductor-uri "variancePartition" version)) | ||||
|        (sha256 | ||||
|         (base32 | ||||
|          "1ycapwb2mq57xibrzzjz9zwxqz4nwz9f3n5gskhlr5vcs7irkjd6")))) | ||||
|     (properties | ||||
|      `((upstream-name . "variancePartition"))) | ||||
|     (build-system r-build-system) | ||||
|     (propagated-inputs | ||||
|      `(("r-biobase" ,r-biobase) | ||||
|        ("r-colorramps" ,r-colorramps) | ||||
|        ("r-doparallel" ,r-doparallel) | ||||
|        ("r-foreach" ,r-foreach) | ||||
|        ("r-ggplot2" ,r-ggplot2) | ||||
|        ("r-gplots" ,r-gplots) | ||||
|        ("r-iterators" ,r-iterators) | ||||
|        ("r-limma" ,r-limma) | ||||
|        ("r-lme4" ,r-lme4) | ||||
|        ("r-lmertest" ,r-lmertest) | ||||
|        ("r-mass" ,r-mass) | ||||
|        ("r-pbkrtest" ,r-pbkrtest) | ||||
|        ("r-progress" ,r-progress) | ||||
|        ("r-reshape2" ,r-reshape2) | ||||
|        ("r-scales" ,r-scales))) | ||||
|     (home-page "https://bioconductor.org/packages/variancePartition/") | ||||
|     (synopsis "Analyze variation in gene expression experiments") | ||||
|     (description | ||||
|      "This is a package providing tools to quantify and interpret multiple | ||||
| sources of biological and technical variation in gene expression experiments. | ||||
| It uses a linear mixed model to quantify variation in gene expression | ||||
| attributable to individual, tissue, time point, or technical variables.  The | ||||
| package includes dream differential expression analysis for repeated | ||||
| measures.") | ||||
|     (license license:gpl2+))) | ||||
|  |  | |||
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