gnu: Add samtools-1.9.
* gnu/packages/bioinformatics.scm (samtools-1.9): New variable.master
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da4a38edad
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@ -5699,6 +5699,31 @@ variant calling (in conjunction with bcftools), and a simple alignment
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viewer.")
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viewer.")
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(license license:expat)))
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(license license:expat)))
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(define-public samtools-1.9
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(package (inherit samtools)
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(name "samtools")
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(version "1.9")
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(source
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(origin
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(method url-fetch)
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(uri
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(string-append "mirror://sourceforge/samtools/samtools/"
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version "/samtools-" version ".tar.bz2"))
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(sha256
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(base32
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"10ilqbmm7ri8z431sn90lvbjwizd0hhkf9rcqw8j823hf26nhgq8"))
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(modules '((guix build utils)))
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(snippet '(begin
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;; Delete bundled htslib.
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(delete-file-recursively "htslib-1.9")
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#t))))
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(inputs
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`(("htslib" ,htslib-1.9)
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("ncurses" ,ncurses)
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("perl" ,perl)
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("python" ,python)
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("zlib" ,zlib)))))
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(define-public samtools-0.1
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(define-public samtools-0.1
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;; This is the most recent version of the 0.1 line of samtools. The input
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;; This is the most recent version of the 0.1 line of samtools. The input
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;; and output formats differ greatly from that used and produced by samtools
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;; and output formats differ greatly from that used and produced by samtools
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