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gnu: r-mast: Update to 1.24.1.

* gnu/packages/bioconductor.scm (r-mast): Update to 1.24.1.
[source]: Delete minified JavaScript.
[arguments]: Add build phase 'process-javascript.
[native-inputs]: Add esbuild and js-jquery-sticky-kit.
master
Ricardo Wurmus 2023-03-15 14:26:27 +01:00
parent cacd7b6768
commit db17611dc9
No known key found for this signature in database
GPG Key ID: 197A5888235FACAC
1 changed files with 24 additions and 3 deletions

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@ -10848,16 +10848,28 @@ the numbers of cells across batches.")
(define-public r-mast
(package
(name "r-mast")
(version "1.24.0")
(version "1.24.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "MAST" version))
(sha256
(base32
"133ijkw5sd0gl38dfr7qfqvvp2df7lg6j8vkvy54zlpamkg6l2x1"))))
"1c0lc4abnb859x481ky6d3kc9zzxwvf4kqgwxyqapc4g72b4vh65"))
(snippet
'(delete-file "docs/jquery.sticky-kit.min.js"))))
(properties `((upstream-name . "MAST")))
(build-system r-build-system)
(arguments
(list
#:phases
'(modify-phases %standard-phases
(add-after 'unpack 'process-javascript
(lambda* (#:key inputs #:allow-other-keys)
(invoke "esbuild"
(assoc-ref inputs "js-jquery-sticky-kit")
"--minify"
"--outfile=docs/jquery.sticky-kit.min.js"))))))
(propagated-inputs
(list r-abind
r-biobase
@ -10872,7 +10884,16 @@ the numbers of cells across batches.")
r-stringr
r-summarizedexperiment))
(native-inputs
(list r-knitr))
`(("esbuild" ,esbuild)
("js-jquery-sticky-kit"
,(origin
(method url-fetch)
(uri
"https://cdn.jsdelivr.net/gh/leafo/sticky-kit@v1.1.2/jquery.sticky-kit.js")
(sha256
(base32
"17c3a1hqc3ybwj7hpw8prazajp2x98aq7nyfn71h6lzjvblq297g"))))
("r-knitr" ,r-knitr)))
(home-page "https://github.com/RGLab/MAST/")
(synopsis "Model-based analysis of single cell transcriptomics")
(description