gnu: r-harmony: Update to 1.2.0.
* gnu/packages/cran.scm (r-harmony): Update to 1.2.0. [source]: Remove snippet. [home-page]: Update to canonical CRAN URL. [propagated-inputs]: Remove r-irlba and r-tidyr; add r-rhpcblasctl. [native-inputs]: Remove autoconf; add r-knitr. Change-Id: I3c554bbb29ccc2b8a24d2d46e362b7d7cae56c1c Signed-off-by: Ricardo Wurmus <rekado@elephly.net>master
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@ -26954,44 +26954,32 @@ dataset-specific factors.")
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(define-public r-harmony
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(package
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(name "r-harmony")
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(version "0.1")
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(version "1.2.0")
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(source
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(origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/immunogenomics/harmony")
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(commit version)))
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(file-name (git-file-name name version))
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(method url-fetch)
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(uri (cran-uri "harmony" version))
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(sha256
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(base32
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"05r401q09rbr6fqhb9mbd95082cjdi3nag1cv6zn96xkr0f6imq9"))
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(modules '((guix build utils)))
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(snippet
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'(begin
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(for-each delete-file '("config.status" "configure"))
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#t))))
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(base32 "1df7bb9ba3m0c44fhmh8cs4hlkh4fffjwm8rz7l87lf5pdy7sg56"))))
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(properties `((upstream-name . "harmony")))
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(build-system r-build-system)
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(propagated-inputs
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(list r-cowplot
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r-dplyr
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r-ggplot2
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r-irlba
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r-matrix
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r-rcpp
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r-rcpparmadillo
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r-rcppprogress
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r-rlang
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r-tibble
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r-tidyr))
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(native-inputs
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(list autoconf))
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(home-page "https://github.com/immunogenomics/harmony")
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(propagated-inputs (list r-cowplot
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r-dplyr
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r-ggplot2
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r-matrix
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r-rcpp
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r-rcpparmadillo
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r-rcppprogress
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r-rhpcblasctl
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r-rlang
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r-tibble))
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(native-inputs (list r-knitr))
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(home-page "https://cran.r-project.org/web/packages/harmony/index.html")
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(synopsis "Integration of single cell sequencing data")
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(description
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"This package provides an implementation of the Harmony algorithm for
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single cell integration, described in Korsunsky et al
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@url{doi.org/10.1101/461954}. The package includes a standalone Harmony
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function and interfaces to external frameworks.")
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single cell integration. This package includes a standalone Harmony function
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and interfaces to external frameworks.")
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(license license:gpl3)))
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(define-public r-covr
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