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gnu: hdf5: Add output for fortran interface.

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* gnu/packages/maths.scm (hdf5) [native-inputs]: Add gfortran.
  [outputs]: Add "fortran".
  [arguments]: Enable Fortran compilation; add "/lib" directory of the fortran
  output to the runpath of the Fortran libs; add a 'split phase to move
  all Fortran-related files to the the Fortran output store location.
This commit is contained in:
Thomas Danckaert 2017-08-24 11:00:59 +02:00 • committed by Thomas Danckaert
parent a0596a2f27
commit e3a1a1deda
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1 changed files with 50 additions and 3 deletions
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gnu/packages/maths.scm
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@ -648,16 +648,30 @@ incompatible with HDF5.")
(build-system gnu-build-system)
(inputs
`(("zlib" ,zlib)))
(native-inputs
`(("gfortran" ,gfortran)))
(outputs '("out" ; core library
"fortran")) ; fortran interface
(arguments
`(;; Some of the users, notably Flann, need the C++ interface.
#:configure-flags '("--enable-cxx")
#:configure-flags '("--enable-cxx"
"--enable-fortran"
"--enable-fortran2003")
#:phases
(modify-phases %standard-phases
(add-before 'configure 'patch-configure
(lambda _
(lambda* (#:key outputs #:allow-other-keys)
(substitute* "configure"
(("/bin/mv") "mv"))
(substitute* "fortran/src/Makefile.in"
(("libhdf5_fortran_la_LDFLAGS =")
(string-append "libhdf5_fortran_la_LDFLAGS = -Wl-rpath="
(assoc-ref outputs "fortran") "/lib")))
(substitute* "hl/fortran/src/Makefile.in"
(("libhdf5hl_fortran_la_LDFLAGS =")
(string-append "libhdf5hl_fortran_la_LDFLAGS = -Wl,-rpath="
(assoc-ref outputs "fortran") "/lib")))
#t))
(add-after 'install 'patch-references
(lambda* (#:key inputs outputs #:allow-other-keys)
@ -666,7 +680,40 @@ incompatible with HDF5.")
(substitute* (find-files bin "h5p?cc")
(("-lz" lib)
(string-append "-L" zlib "/lib " lib)))
#t))))))
#t)))
(add-after 'install 'split
(lambda* (#:key inputs outputs #:allow-other-keys)
;; Move all fortran-related files
(let* ((out (assoc-ref outputs "out"))
(bin (string-append out "/bin"))
(lib (string-append out "/lib"))
(inc (string-append out "/include"))
(ex (string-append out "/share/hdf5_examples/fortran"))
(fort (assoc-ref outputs "fortran"))
(fbin (string-append fort "/bin"))
(flib (string-append fort "/lib"))
(finc (string-append fort "/include"))
(fex (string-append fort "/share/hdf5_examples/fortran")))
(mkdir-p fbin)
(mkdir-p flib)
(mkdir-p finc)
(mkdir-p fex)
(rename-file (string-append bin "/h5fc")
(string-append fbin "/h5fc"))
(for-each (lambda (file)
(rename-file file
(string-append flib "/" (basename file))))
(find-files lib ".*fortran.*"))
(for-each (lambda (file)
(rename-file file
(string-append finc "/" (basename file))))
(find-files inc ".*mod"))
(for-each (lambda (file)
(rename-file file
(string-append fex "/" (basename file))))
(find-files ex ".*"))
(delete-file-recursively ex))
#t)))))
(home-page "http://www.hdfgroup.org")
(synopsis "Management suite for extremely large and complex data")
(description "HDF5 is a suite that makes possible the management of