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@ -8821,3 +8821,34 @@ package for using sparse matrices. Some of the functions are very general,
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while other are highly specific for the special data format used for
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while other are highly specific for the special data format used for
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@dfn{quantitative language comparison} (QLC).")
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@dfn{quantitative language comparison} (QLC).")
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(license license:gpl3)))
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(license license:gpl3)))
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(define-public r-ddrtree
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(package
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(name "r-ddrtree")
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(version "0.1.5")
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(source
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(origin
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(method url-fetch)
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(uri (cran-uri "DDRTree" version))
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(sha256
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(base32
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"16s5fjw7kwlxhrkzdny62sx32fvmg3rxjc3wrh6krd31jh1fqlfk"))))
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(properties `((upstream-name . "DDRTree")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-bh" ,r-bh)
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("r-irlba" ,r-irlba)
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("r-rcpp" ,r-rcpp)
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("r-rcppeigen" ,r-rcppeigen)))
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(home-page "https://cran.r-project.org/web/packages/DDRTree")
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(synopsis "Learning principal graphs with DDRTree")
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(description
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"This package provides an implementation of the framework of
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@dfn{reversed graph embedding} (RGE) which projects data into a reduced
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dimensional space while constructs a principal tree which passes through the
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middle of the data simultaneously. DDRTree shows superiority to
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alternatives (Wishbone, DPT) for inferring the ordering as well as the
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intrinsic structure of single cell genomics data. In general, it could be
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used to reconstruct the temporal progression as well as the bifurcation
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structure of any data type.")
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(license license:asl2.0)))
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