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gnu: java-picard-2.10.3: Delete failing build phase. 

* gnu/packages/bioinformatics.scm (java-picard-2.10.3)[arguments]: Delete
generate-jar-indices phase.
master
Ricardo Wurmus 2018-06-05 11:14:38 +02:00
parent d7e6fb6d7e
commit e847f402c1
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@ -3211,6 +3211,8 @@ VCF.")
(sxml xpath)) (sxml xpath))
#:phases #:phases
(modify-phases %standard-phases (modify-phases %standard-phases
;; FIXME: this phase fails with "duplicate entry: htsjdk/samtools/AbstractBAMFileIndex$1.class"
(delete 'generate-jar-indices)
(add-after 'unpack 'remove-useless-build.xml (add-after 'unpack 'remove-useless-build.xml
(lambda _ (delete-file "build.xml") #t)) (lambda _ (delete-file "build.xml") #t))
;; This is necessary to ensure that htsjdk is found when using ;; This is necessary to ensure that htsjdk is found when using