gnu: Add r-piano.
* gnu/packages/bioconductor.scm (r-piano): New variable. Change-Id: I1bc2387563510c47614748423a3b510adc0486aa Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
parent
a8680f59e3
commit
e8cd556a7c
|
@ -9109,6 +9109,43 @@ isotypes. This R package enables the identification and classification of such
|
|||
domain isotypes from pfam data.")
|
||||
(license license:expat)))
|
||||
|
||||
(define-public r-piano
|
||||
(package
|
||||
(name "r-piano")
|
||||
(version "2.16.0")
|
||||
(source
|
||||
(origin
|
||||
(method url-fetch)
|
||||
(uri (bioconductor-uri "piano" version))
|
||||
(sha256
|
||||
(base32 "0rm9afgq4n7yinmx09b0xd17wgzhbswm80vcjmmwxr6fv1741xfy"))))
|
||||
(properties `((upstream-name . "piano")))
|
||||
(build-system r-build-system)
|
||||
(propagated-inputs
|
||||
(list r-biobase
|
||||
r-biocgenerics
|
||||
r-dt
|
||||
r-fgsea
|
||||
r-gplots
|
||||
r-htmlwidgets
|
||||
r-igraph
|
||||
r-marray
|
||||
r-relations
|
||||
r-scales
|
||||
r-shiny
|
||||
r-shinydashboard
|
||||
r-shinyjs
|
||||
r-visnetwork))
|
||||
(native-inputs (list r-knitr))
|
||||
(home-page "https://varemo.github.io/piano/")
|
||||
(synopsis "Platform for integrative analysis of omics data")
|
||||
(description
|
||||
"Piano performs gene set analysis using various statistical methods, from
|
||||
different gene level statistics and a wide range of gene-set collections. The
|
||||
package contains functions for combining the results of multiple runs of gene
|
||||
set analyses.")
|
||||
(license license:gpl2+)))
|
||||
|
||||
;; This is a CRAN package, but it depends on a Bioconductor package:
|
||||
;; r-aroma-light, r-dnacopy..
|
||||
(define-public r-pscbs
|
||||
|
|
Reference in New Issue