From eb1d80ac77edc65d5feca4eedfda9a54d8e1e922 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Fri, 19 Jan 2024 23:48:00 +0100 Subject: [PATCH] gnu: Add r-trnadbimport. * gnu/packages/bioconductor.scm (r-trnadbimport): New variable. Change-Id: I5a232b50c08ef999f691566ccf5c0fbaf0eb21ea --- gnu/packages/bioconductor.scm | 30 ++++++++++++++++++++++++++++++ 1 file changed, 30 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 80b31e5f17..1bca54f387 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -11286,6 +11286,36 @@ data. The tRNA package uses GRanges objects as inputs requiring only few additional column data sets.") (license license:gpl3))) +(define-public r-trnadbimport + (package + (name "r-trnadbimport") + (version "1.20.1") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "tRNAdbImport" version)) + (sha256 + (base32 "1i2mismx914ijys13wwz50gkk682rklp36aci270nc7vx78hynni")))) + (properties `((upstream-name . "tRNAdbImport"))) + (build-system r-build-system) + (propagated-inputs (list r-biostrings + r-genomicranges + r-httr2 + r-iranges + r-modstrings + r-s4vectors + r-stringr + r-structstrings + r-trna + r-xml2)) + (native-inputs (list r-knitr)) + (home-page "https://bioconductor.org/packages/tRNAdbImport") + (synopsis "Importing from tRNAdb and mitotRNAdb as GRanges objects") + (description + "@code{tRNAdbImport} imports the entries of the @code{tRNAdb} and +@code{mtRNAdb} as GRanges object.") + (license license:gpl3))) + (define-public r-scds (package (name "r-scds")