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3
.guix-authorizations
View file

@ -90,6 +90,9 @@
(;; primary: "B68B DF22 73F9 DA0E 63C1 8A32 515B F416 9242 D600"
"C699 ED09 E51B CE89 FD1D A078 AAC7 E891 896B 568A"
(name "pgarlick"))
(;; primary: "7E9F 5BF6 1680 4367 127B 7A87 F9E6 9FB8 5A75 54F1"
"A420 7B56 C255 109F 2CB3 157E 4990 97AE 5EA8 15D9"
(name "podiki"))
("CD2D 5EAA A98C CB37 DA91 D6B0 5F58 1664 7F8B E551"
(name "raghavgururajan"))
("BCA6 89B6 3655 3801 C3C6 2150 197A 5888 235F ACAC"

32
NEWS
View file

@ -80,9 +80,28 @@ Please send Guix bug reports to bug-guix@gnu.org.
*** The init RAM disk honors more arguments—e.g. ‘root’ and ‘rootflags’
*** ‘guix system image’ can now generate WSL images
*** The mcron task scheduler logs now contain the jobs exit statuses
*** Chromium extensions are now built in a deterministic fashion
*** The ‘rsync’ service lets you specify individual “modules”
*** New services
anonip, bitmask, fail2ban, gitile, greetd, jami, lightdm, log-cleanup,
nar-herder, opendht, rasdaemon, samba, seatd, strongswan, wsdd
*** 5311 new packages
*** 6573 package updates
Noteworthy updates:
bash 5.1.8, binutils 2.37, clojure 1.11.1, cups 2.3.3op2, emacs 28.2,
enlightenment 0.25.4, gcc-toolchain 12.2.0, gdb 12.1, ghc 8.10.7,
gimp 2.10.32, glibc 2.33, gnome 42.4, gnupg 2.2.32, go 1.19.1, guile 3.0.8,
icecat 102.5.0-guix0-preview1, icedtea 3.19.0, inkscape 1.2.1, julia 1.6.7,
libreoffice 7.4.3.2, linux-libre 6.0.10, ocaml 4.14.0, octave 7.2.0,
openjdk 18, perl 5.34.0, python2 2.7.18, python 3.9.9, racket 8.7,
rust 1.60.0, r 4.2.2, sbcl 2.2.10, shepherd 0.9.3, xorg-server 21.1.4
** Programming interfaces
*** Package input fields can now plain package lists
*** Package input fields can now be plain package lists
*** G-expressions can now be used in build phases
*** New ‘modify-inputs’ macro to ease customizing a list of package inputs
*** New ‘this-package-input’ and ‘this-package-native-input’ macros
@ -92,7 +111,7 @@ Please send Guix bug reports to bug-guix@gnu.org.
*** ‘texlive-union’ is now deprecated in favor of ‘texlive-updmap.cfg’
*** New (guix cpu) module
*** New (guix least-authority) module
*** New (guix plaform) module
*** New (guix platform) module
*** New (guix read-print) module
It provides a comment-preserving reader and a comment-preserving
@ -103,11 +122,14 @@ pretty-printer smarter than (ice-9 pretty-print).
This build system lets you build Guix instances from channel specifications,
similar to how 'guix time-machine' would do it, as regular packages.
*** New ‘pyproject-build-system’
This is an extension of ‘python-build-system’ with support for PEP-517 and
‘pyproject.toml’ files. It may eventually get merged back into
‘python-build-system’.
*** New ‘elm-build-system’
*** New ‘rebar-build-system’
*** New services
anonip, bitmask, fail2ban, gitile, greetd, jami, lightdm, log-cleanup,
nar-herder, opendht, rasdaemon, samba, seatd, strongswan, wsdd
** Noteworthy bug fixes
*** Fall back to Software Heritage when cloning a channel

2
doc/contributing.texi
View file

@ -1514,7 +1514,7 @@ that we can send the rest of the patches to.
@example
$ git send-email outgoing/0000-cover-letter.patch -a \
--to=guix-patches@@debbugs.gnu.org \
--to=guix-patches@@gnu.org \
$(etc/teams.scm cc-members ...)
$ rm outgoing/0000-cover-letter.patch # we don't want to resend it!
@end example

263
doc/guix.texi
View file

@ -10,8 +10,8 @@
@include version.texi
@c Identifier of the OpenPGP key used to sign tarballs and such.
@set OPENPGP-SIGNING-KEY-ID 27D586A4F8900854329FF09F1260E46482E63562
@set OPENPGP-SIGNING-KEY-URL https://sv.gnu.org/people/viewgpg.php?user_id=127547
@set OPENPGP-SIGNING-KEY-ID 3CE464558A84FDC69DB40CFB090B11993D9AEBB5
@set OPENPGP-SIGNING-KEY-URL https://sv.gnu.org/people/viewgpg.php?user_id=15145
@c Base URL for downloads.
@set BASE-URL https://ftp.gnu.org/gnu/guix
@ -1522,8 +1522,10 @@ To install the policy run this command as root:
semodule -i etc/guix-daemon.cil
@end example
Then relabel the file system with @code{restorecon} or by a different
mechanism provided by your system.
Then relabel the file system with @code{restorecon -vR /} or by a
different mechanism provided by your system. You may need to remount
@file{/gnu/store} to make it writable first, e.g. with @code{mount -o
remount,rw /gnu/store}.
Once the policy is installed, the file system has been relabeled, and
the daemon has been restarted, it should be running in the
@ -1556,7 +1558,7 @@ but it would be preferable to define socket rules for only this label.
@code{guix gc} cannot access arbitrary links to profiles. By design,
the file label of the destination of a symlink is independent of the
file label of the link itself. Although all profiles under
$localstatedir are labelled, the links to these profiles inherit the
@file{$localstatedir} are labelled, the links to these profiles inherit the
label of the directory they are in. For links in the user’s home
directory this will be @code{user_home_t}. But for links from the root
user’s home directory, or @file{/tmp}, or the HTTP server’s working
@ -11706,8 +11708,7 @@ This is the declarative counterpart of @code{text-file}.
@end deffn
@deffn {Scheme Procedure} computed-file @var{name} @var{gexp} @
[#:local-build? #t]
[#:options '()]
[#:local-build? #t] [#:options '()]
Return an object representing the store item @var{name}, a file or
directory computed by @var{gexp}. When @var{local-build?} is true (the
default), the derivation is built locally. @var{options} is a list of
@ -13933,6 +13934,25 @@ gnu/packages/multiprecision.scm:40:12: 6.1.2 is already the latest version of gm
@end table
If for some reason you don't want to update to the latest version, you
can update to a specific version by appending an equal sign and the
desired version number to the package specification. Note that not all
updaters support this; an error is reported when an updater cannot
refresh to the specified version.
@example
$ guix refresh trytond-party
gnu/packages/guile.scm:392:2: guile would be upgraded from 3.0.3 to 3.0.5
$ guix refresh -u guile=3.0.4
@dots{}
gnu/packages/guile.scm:392:2: guile: updating from version 3.0.3 to version 3.0.4...
@dots{}
$ guix refresh -u guile@@2.0=2.0.12
@dots{}
gnu/packages/guile.scm:147:2: guile: updating from version 2.0.10 to version 2.0.12...
@dots{}
@end example
Sometimes the upstream name differs from the package name used in Guix,
and @command{guix refresh} needs a little help. Most updaters honor the
@code{upstream-name} property in package definitions, which can be used
@ -17060,7 +17080,7 @@ I/O faster, and thus paging out unused portions of program memory will
expand the RAM available for such caching.
For a more detailed description of how memory is managed from the
viewpoint of a monolithic kernel, @xref{Memory
viewpoint of a monolithic kernel, @pxref{Memory
Concepts,,, libc, The GNU C Library Reference Manual}.
The Linux kernel has support for swap partitions and swap files: the
@ -23237,8 +23257,6 @@ manages all the Bluetooth devices and provides a number of D-Bus
interfaces. When AUTO-ENABLE? is true, the bluetooth controller is
powered automatically at boot, which can be useful when using a
bluetooth keyboard or mouse.
Users need to be in the @code{lp} group to access the D-Bus service.
@end deffn
@deffn {Scheme Variable} bluetooth-service-type
@ -25730,6 +25748,11 @@ Data type representing the configuration of opensmtpd.
@item @code{package} (default: @var{opensmtpd})
Package object of the OpenSMTPD SMTP server.
@item @code{shepherd-requirement} (default: @code{'()})
This option can be used to provide a list of symbols naming Shepherd services
that this service will depend on, such as @code{'networking}
if you want to configure OpenSMTPD to listen on non-loopback interfaces.
@item @code{config-file} (default: @code{%default-opensmtpd-config-file})
File-like object of the OpenSMTPD configuration file to use. By default
it listens on the loopback network interface, and allows for mail from
@ -28453,6 +28476,8 @@ Local accounts with lower values will silently fail to authenticate.
@node LDAP Services
@subsection LDAP Services
@cindex LDAP
@subsubheading Authentication against LDAP with nslcd
@cindex nslcd, LDAP service
The @code{(gnu services authentication)} module provides the
@ -28929,6 +28954,189 @@ Defaults to @samp{()}.
@c %end of generated documentation for nslcd-configuration
@subsubheading LDAP Directory Server
@cindex LDAP, server
The @code{(gnu services ldap)} module provides the
@code{directory-server-service-type}, which can be used to create and
launch an LDAP server instance.
Here is an example configuration of the
@code{directory-server-service-type}:
@lisp
(use-service-modules ldap)
...
(operating-system
...
(services
(cons
(service directory-server-service-type
(directory-server-instance-configuration
(slapd
(slapd-configuration
(root-password "@{PBKDF2_SHA256@}AAAgAG@dots{}ABSOLUTELYSECRET")))))
%base-services)))
@end lisp
The root password should be generated with the @command{pwdhash} utility
that is provided by the @code{389-ds-base} package.
Note that changes to the directory server configuration will not be
applied to existing instances. You will need to back up and restore
server data manually. Only new directory server instances will be
created upon system reconfiguration.
@c %start of generated documentation for directory-server-instance-configuration
@deftp {Data Type} directory-server-instance-configuration
Available @code{directory-server-instance-configuration} fields are:
@table @asis
@item @code{package} (default: @code{389-ds-base}) (type: file-like)
The @code{389-ds-base} package.
@item @code{config-version} (default: @code{2}) (type: number)
Sets the format version of the configuration file. To use the INF file
with @command{dscreate}, this parameter must be 2.
@item @code{full-machine-name} (default: @code{"localhost"}) (type: string)
Sets the fully qualified hostname (FQDN) of this system.
@item @code{selinux} (default: @code{#false}) (type: boolean)
Enables SELinux detection and integration during the installation of
this instance. If set to @code{#true}, @command{dscreate} auto-detects
whether SELinux is enabled.
@item @code{strict-host-checking} (default: @code{#true}) (type: boolean)
Sets whether the server verifies the forward and reverse record set in
the @code{full-machine-name} parameter. When installing this instance with
GSSAPI authentication behind a load balancer, set this parameter to
@code{#false}.
@item @code{systemd} (default: @code{#false}) (type: boolean)
Enables systemd platform features. If set to @code{#true},
@command{dscreate} auto-detects whether systemd is installed.
@item @code{slapd} (type: slapd-configuration)
Configuration of slapd.
@deftp {Data Type} slapd-configuration
Available @code{slapd-configuration} fields are:
@table @asis
@item @code{instance-name} (default: @code{"localhost"}) (type: string)
Sets the name of the instance. You can refer to this value in other
parameters of this INF file using the @code{@{instance_name@}} variable.
Note that this name cannot be changed after the installation!
@item @code{user} (default: @code{"dirsrv"}) (type: string)
Sets the user name the ns-slapd process will use after the service
started.
@item @code{group} (default: @code{"dirsrv"}) (type: string)
Sets the group name the ns-slapd process will use after the service
started.
@item @code{port} (default: @code{389}) (type: number)
Sets the TCP port the instance uses for LDAP connections.
@item @code{secure-port} (default: @code{636}) (type: number)
Sets the TCP port the instance uses for TLS-secured LDAP connections
(LDAPS).
@item @code{root-dn} (default: @code{"cn=Directory Manager"}) (type: string)
Sets the @dfn{Distinquished Name} (DN) of the administrator account for this
instance.
@item @code{root-password} (default: @code{"@{invalid@}YOU-SHOULD-CHANGE-THIS"}) (type: string)
Sets the password of the account specified in the @code{root-dn}
parameter. You can either set this parameter to a plain text password
@command{dscreate} hashes during the installation or to a
"@{algorithm@}hash" string generated by the @command{pwdhash} utility.
Note that setting a plain text password can be a security risk if
unprivileged users can read this INF file!
@item @code{self-sign-cert} (default: @code{#true}) (type: boolean)
Sets whether the setup creates a self-signed certificate and enables TLS
encryption during the installation. This is not suitable for
production, but it enables administrators to use TLS right after the
installation. You can replace the self-signed certificate with a
certificate issued by a certificate authority.
@item @code{self-sign-cert-valid-months} (default: @code{24}) (type: number)
Set the number of months the issued self-signed certificate will be
valid.
@item @code{backup-dir} (default: @code{"/var/lib/dirsrv/slapd-@{instance_name@}/bak"}) (type: string)
Set the backup directory of the instance.
@item @code{cert-dir} (default: @code{"/etc/dirsrv/slapd-@{instance_name@}"}) (type: string)
Sets the directory of the instance's Network Security Services (NSS)
database.
@item @code{config-dir} (default: @code{"/etc/dirsrv/slapd-@{instance_name@}"}) (type: string)
Sets the configuration directory of the instance.
@item @code{db-dir} (default: @code{"/var/lib/dirsrv/slapd-@{instance_name@}/db"}) (type: string)
Sets the database directory of the instance.
@item @code{initconfig-dir} (default: @code{"/etc/dirsrv/registry"}) (type: string)
Sets the directory of the operating system's rc configuration directory.
@item @code{ldif-dir} (default: @code{"/var/lib/dirsrv/slapd-@{instance_name@}/ldif"}) (type: string)
Sets the LDIF export and import directory of the instance.
@item @code{lock-dir} (default: @code{"/var/lock/dirsrv/slapd-@{instance_name@}"}) (type: string)
Sets the lock directory of the instance.
@item @code{log-dir} (default: @code{"/var/log/dirsrv/slapd-@{instance_name@}"}) (type: string)
Sets the log directory of the instance.
@item @code{run-dir} (default: @code{"/run/dirsrv"}) (type: string)
Sets PID directory of the instance.
@item @code{schema-dir} (default: @code{"/etc/dirsrv/slapd-@{instance_name@}/schema"}) (type: string)
Sets schema directory of the instance.
@item @code{tmp-dir} (default: @code{"/tmp"}) (type: string)
Sets the temporary directory of the instance.
@end table
@end deftp
@item @code{backend-userroot} (type: backend-userroot-configuration)
Configuration of the userroot backend.
@deftp {Data Type} backend-userroot-configuration
Available @code{backend-userroot-configuration} fields are:
@table @asis
@item @code{create-suffix-entry?} (default: @code{#false}) (type: boolean)
Set this parameter to @code{#true} to create a generic root node entry
for the suffix in the database.
@item @code{require-index?} (default: @code{#false}) (type: boolean)
Set this parameter to @code{#true} to refuse unindexed searches in this
database.
@item @code{sample-entries} (default: @code{"no"}) (type: string)
Set this parameter to @code{"yes"} to add latest version of sample
entries to this database. Or, use @code{"001003006"} to use the 1.3.6
version sample entries. Use this option, for example, to create a
database for testing purposes.
@item @code{suffix} (type: maybe-string)
Sets the root suffix stored in this database. If you do not set the
suffix attribute the install process will not create the backend/suffix.
You can also create multiple backends/suffixes by duplicating this
section.
@end table
@end deftp
@end table
@end deftp
@c end of generated documentation for directory-server
@node Web Services
@subsection Web Services
@ -30820,7 +31028,7 @@ cache.size = 100 * MB
"))))
@end lisp
For more information, refer its @url{https://knot-resolver.readthedocs.org/en/stable/daemon.html#configuration, manual}.
For more information, refer its @url{https://knot-resolver.readthedocs.io/en/stable/config-overview.html, manual}.
@end deffn
@deftp {Data Type} knot-resolver-configuration
@ -31579,6 +31787,10 @@ The optional endpoint for the peer, such as
@item @code{public-key}
The peer public-key represented as a base64 string.
@item @code{preshared-key} (default: @code{#f})
An optional pre-shared key file for this peer. The given file will not
be autogenerated.
@item @code{allowed-ips}
A list of IP addresses from which incoming traffic for this peer is
allowed and to which incoming traffic for this peer is directed.
@ -34065,6 +34277,10 @@ To override a setting, you must use the configuration type for that service:
@item @code{file-storage-paths} (default: @code{'()})
List of allowed directories for file storage backend.
@item @code{hooks} (default: @code{#f})
When set, this should be a file-like object containing a directory with
@url{https://docs.ganeti.org/docs/ganeti/3.0/html/hooks.html,cluster execution hooks}.
@item @code{os} (default: @code{%default-ganeti-os})
List of @code{<ganeti-os>} records.
@end table
@ -37209,6 +37425,15 @@ The Nix package to use.
@item @code{sandbox} (default: @code{#t})
Specifies whether builds are sandboxed by default.
@item @code{build-directory} (default: @code{"/tmp"})
The directory where build directory are stored during builds.
This is useful to change if, for example, the default location does not
have enough space to hold build trees for big packages.
This is similar to setting the @env{TMPDIR} environment variable for
@command{guix-daemon}. @ref{Build Environment Setup, @env{TMPDIR}},
for more info.
@item @code{build-sandbox-items} (default: @code{'()})
This is a list of strings or objects appended to the
@code{build-sandbox-items} field of the configuration file.
@ -39255,7 +39480,7 @@ $ qemu-system-x86_64 \
-nic user,model=virtio-net-pci \
-enable-kvm -m 2048 \
-device virtio-blk,drive=myhd \
-drive if=none,file=/tmp/qemu-image,id=myhd
-drive if=none,file=guix-system-vm-image-@value{VERSION}.x86_64-linux.qcow2,id=myhd
@end example
Here is what each of these options means:
@ -39291,8 +39516,9 @@ better performance than if it were emulating a complete disk drive. See the
QEMU and KVM documentation for more info.
@item -drive if=none,file=/tmp/qemu-image,id=myhd
Use our QCOW image, the @file{/tmp/qemu-image} file, as the backing
store of the ``myhd'' drive.
Use our QCOW image, the
@file{guix-system-vm-image-@value{VERSION}.x86_64-linux.qcow2} file, as
the backing store of the ``myhd'' drive.
@end table
The default @command{run-vm.sh} script that is returned by an invocation of
@ -39521,11 +39747,10 @@ The service type for an @emph{extensible} service looks like this:
(compose concatenate) ;concatenate the list of rules
(extend (lambda (config rules)
(match config
(($ <udev-configuration> udev initial-rules)
(udev-configuration
(udev udev) ;the udev package to use
(rules (append initial-rules rules)))))))))
(udev-configuration
(inherit config)
(rules (append (udev-configuration-rules config)
rules)))))))
@end lisp
This is the service type for the

12
doc/htmlxref.cnf
View file

@ -1,7 +1,7 @@
# htmlxref.cnf - reference file for free Texinfo manuals on the web.
# Modified by Ludovic Courtès <ludo@gnu.org> for the GNU Guix manual.
htmlxrefversion=2022-08-04.13; # UTC
htmlxrefversion=2022-12-18.15; # UTC
# Copyright 2010-2020, 2022 Free Software Foundation, Inc.
#
@ -409,6 +409,8 @@ GUILE_GNOME = ${GS}/guile-gnome/docs
guile-gtk node ${GS}/guile-gtk/docs/guile-gtk/
guile-netlink mono https://git.lepiller.eu/guile-netlink/manual/manual.html
guile-rpc mono ${GS}/guile-rpc/manual/guile-rpc.html
guile-rpc node ${GS}/guile-rpc/manual/html_node/
@ -420,6 +422,8 @@ GUIX = ${GUIX_ROOT}/manual
guix.es node ${GUIX}/es/html_node/
guix.fr mono ${GUIX}/fr/guix.fr.html
guix.fr node ${GUIX}/fr/html_node/
guix.pt_BR mono ${GUIX}/pt-br/guix.pt_BR.html
guix.pt_BR node ${GUIX}/pt-br/html_node/
guix.ru mono ${GUIX}/ru/guix.ru.html
guix.ru node ${GUIX}/ru/html_node/
guix.zh_CN mono ${GUIX}/zh-cn/guix.zh_CN.html
@ -428,10 +432,12 @@ GUIX = ${GUIX_ROOT}/manual
guix node ${GUIX}/en/html_node/
GUIX_COOKBOOK = ${GUIX_ROOT}/cookbook
guix-cookbook.de mono ${GUIX_COOKBOOK}/de/guix-cookbook.html
guix-cookbook.de mono ${GUIX_COOKBOOK}/de/guix-cookbook.de.html
guix-cookbook.de node ${GUIX_COOKBOOK}/de/html_node/
guix-cookbook.fr mono ${GUIX_COOKBOOK}/fr/guix-cookbook.html
guix-cookbook.fr mono ${GUIX_COOKBOOK}/fr/guix-cookbook.fr.html
guix-cookbook.fr node ${GUIX_COOKBOOK}/fr/html_node/
guix-cookbook.sk mono ${GUIX_COOKBOOK}/sk/guix-cookbook.sk.html
guix-cookbook.sk node ${GUIX_COOKBOOK}/sk/html_node/
guix-cookbook mono ${GUIX_COOKBOOK}/en/guix-cookbook.html
guix-cookbook node ${GUIX_COOKBOOK}/en/html_node/

25
etc/guix-daemon.cil.in
View file

@ -1,6 +1,6 @@
; -*- lisp -*-
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2018 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2018, 2022 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2020 Daniel Brooks <db48x@db48x.net>
;;; Copyright © 2020 Marius Bakke <marius@gnu.org>
;;;
@ -37,11 +37,13 @@
(block guix_daemon
;; Require existing types
(typeattributeset cil_gen_require init_t)
(typeattributeset cil_gen_require tmp_t)
(typeattributeset cil_gen_require nscd_var_run_t)
(typeattributeset cil_gen_require var_log_t)
(typeattributeset cil_gen_require domain)
(typeattributeset cil_gen_require init_t)
(typeattributeset cil_gen_require init_var_run_t)
(typeattributeset cil_gen_require nscd_var_run_t)
(typeattributeset cil_gen_require system_dbusd_var_run_t)
(typeattributeset cil_gen_require tmp_t)
(typeattributeset cil_gen_require var_log_t)
;; Declare own types
(type guix_daemon_t)
@ -92,6 +94,9 @@
(allow init_t
guix_store_content_t
(file (open read execute)))
(allow init_t
guix_profiles_t
(dir (setattr)))
;; guix-daemon needs to know the names of users
(allow guix_daemon_t
@ -284,6 +289,14 @@
guix_store_content_t
(sock_file (create getattr setattr unlink write)))
;; Access to run state directories
(allow guix_daemon_t
system_dbusd_var_run_t
(dir (search)))
(allow guix_daemon_t
init_var_run_t
(dir (search)))
;; Access to configuration files and directories
(allow guix_daemon_t
guix_daemon_conf_t
@ -447,6 +460,8 @@
any (unconfined_u object_r guix_store_content_t (low low)))
(filecon "@prefix@/bin/guix-daemon"
file (system_u object_r guix_daemon_exec_t (low low)))
(filecon "@guix_localstatedir@/guix/profiles/per-user/[^/]+/current-guix/bin/guix-daemon"
file (system_u object_r guix_daemon_exec_t (low low)))
(filecon "@storedir@/.+-(guix-.+|profile)/bin/guix-daemon"
file (system_u object_r guix_daemon_exec_t (low low)))
(filecon "@storedir@/[a-z0-9]+-guix-daemon"

12
etc/guix-install.sh
View file

@ -53,6 +53,7 @@ REQUIRE=(
"chmod"
"uname"
"groupadd"
"useradd"
"tail"
"tr"
"xz"
@ -120,10 +121,8 @@ chk_require()
command -v "$c" &>/dev/null || warn+=("$c")
done
[ "${#warn}" -ne 0 ] &&
{ _err "${ERR}Missing commands: ${warn[*]}.";
return 1; }
[ "${#warn}" -ne 0 ] && die "Missing commands: ${warn[*]}."
_msg "${PAS}verification of required commands completed"
}
@ -615,7 +614,10 @@ https://www.gnu.org/software/guix/
EOF
# Don't use ‘read -p’ here! It won't display when run non-interactively.
echo -n "Press return to continue..."$'\r'
read -r char
if ! read -r char; then
echo
die "Can't read standard input. Hint: don't pipe scripts into a shell."
fi
if [ "$char" ]; then
echo
echo "...that ($char) was not a return!"

2
etc/snippets/tempel/text-mode
View file

@ -1,6 +1,6 @@
-*- mode: lisp-data -*-
text-mode :when (and (fboundp 'git-commit-mode) (git-commit-mode))
text-mode :when (and (fboundp 'git-commit-mode) git-commit-mode)
(add\ "gnu: Add "
(p (with-temp-buffer

19
etc/teams.scm.in
View file

@ -360,6 +360,17 @@ asdf-build-system."
"gnu/packages/motti.scm"
"guix/build/minetest-build-system.scm")))
(define-team localization
(team 'localization
#:name "Localization (l10n) team"
#:description
"Localization of your system to specific languages."
#:scope (list "gnu/packages/anthy.scm"
"gnu/packages/fcitx5.scm"
"gnu/packages/fcitx.scm"
"gnu/packages/fonts.scm"
"gnu/packages/ibus.scm")))
(define-team translations
(team 'translations
#:name "Translations"
@ -428,6 +439,10 @@ importer."
"andreas@enge.fr")
science)
(define-member (person "Tobias Geerinckx-Rice"
"me@tobias.gr")
core kernel mentors)
(define-member (person "Björn Höfling"
"bjoern.hoefling@bjoernhoefling.de")
java)
@ -500,6 +515,10 @@ importer."
"rg@raghavgururajan.name")
mentors)
(define-member (person "宋文武"
"iyzsong@envs.net")
games localization)
(define (find-team name)
(or (hash-ref %teams (string->symbol name))

2
gnu/bootloader/u-boot.scm
View file

@ -144,7 +144,7 @@
(define u-boot-beaglebone-black-bootloader
(bootloader
(inherit u-boot-bootloader)
(package u-boot-am335x-boneblack)
(package u-boot-am335x-evm-boneblack)
(disk-image-installer install-beaglebone-black-u-boot)))
(define u-boot-allwinner-bootloader

11
gnu/build/activation.scm
View file

@ -363,9 +363,14 @@ second element is the name it should appear at, such as:
"Tell the kernel to look for device firmware under DIRECTORY. This
mechanism bypasses udev: it allows Linux to handle firmware loading directly
by itself, without having to resort to a \"user helper\"."
(call-with-output-file "/sys/module/firmware_class/parameters/path"
(lambda (port)
(display directory port))))
;; If the kernel was built without firmware loading support, this file
;; does not exist. Do nothing in that case.
(let ((firmware-path "/sys/module/firmware_class/parameters/path"))
(when (file-exists? firmware-path)
(call-with-output-file firmware-path
(lambda (port)
(display directory port))))))
(define (activate-ptrace-attach)
"Allow users to PTRACE_ATTACH their own processes.

2
gnu/build/hurd-boot.scm
View file

@ -194,7 +194,7 @@ set."
("proc" ("/hurd/procfs" "--stat-mode=444"))))
(define devices
'(("dev/full" ("/hurd/null" "--full") #o666)
`(("dev/full" ("/hurd/null" "--full") #o666)
("dev/null" ("/hurd/null") #o666)
("dev/random" ("/hurd/random" "--seed-file" "/var/lib/random-seed")
#o644)

23
gnu/build/install.scm
View file

@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2013-2020, 2022 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2016 Chris Marusich <cmmarusich@gmail.com>
;;; Copyright © 2022 Maxim Cournoyer <maxim.cournoyer@gmail.com>
;;;
@ -282,12 +282,31 @@ disk."
(mount "/.rw-store" (%store-directory) "" MS_MOVE)
(rmdir "/.rw-store")))
(define (umount* directory)
"Unmount DIRECTORY, but retry a few times upon EBUSY."
(let loop ((attempts 5))
(catch 'system-error
(lambda ()
(umount directory))
(lambda args
(if (and (= EBUSY (system-error-errno args))
(> attempts 0))
(begin
(sleep 1)
(loop (- attempts 1)))
(apply throw args))))))
(define (unmount-cow-store target backing-directory)
"Unmount copy-on-write store."
(let ((tmp-dir "/remove"))
(mkdir-p tmp-dir)
(mount (%store-directory) tmp-dir "" MS_MOVE)
(umount tmp-dir)
;; We might get EBUSY at this point, possibly because of lingering
;; processes with open file descriptors. Use 'umount*' to retry upon
;; EBUSY, leaving a bit of time. See <https://issues.guix.gnu.org/59884>.
(umount* tmp-dir)
(rmdir tmp-dir)
(delete-file-recursively
(string-append target backing-directory))))

37
gnu/home/services/xdg.scm
View file

@ -120,22 +120,25 @@ services more consistent."))
home-xdg-base-directories-configuration-fields))
(define (ensure-xdg-base-dirs-on-activation config)
#~(map (lambda (xdg-base-dir-variable)
((@ (guix build utils) mkdir-p)
(getenv
xdg-base-dir-variable)))
'#$(filter-map
(lambda (field)
(let ((variable
(string-append
"XDG_"
(object->snake-case-string
(configuration-field-name field) 'upper))))
;; XDG_RUNTIME_DIR shouldn't be created during activation
;; and will be provided by elogind or other service.
(and (not (string=? "XDG_RUNTIME_DIR" variable))
variable)))
home-xdg-base-directories-configuration-fields)))
(with-imported-modules '((guix build utils))
#~(begin
(use-modules (guix build utils))
(map (lambda (xdg-base-dir-variable)
(mkdir-p
(getenv
xdg-base-dir-variable)))
'#$(filter-map
(lambda (field)
(let ((variable
(string-append
"XDG_"
(object->snake-case-string
(configuration-field-name field) 'upper))))
;; XDG_RUNTIME_DIR shouldn't be created during activation
;; and will be provided by elogind or other service.
(and (not (string=? "XDG_RUNTIME_DIR" variable))
variable)))
home-xdg-base-directories-configuration-fields)))))
(define (last-extension-or-cfg config extensions)
"Picks configuration value from last provided extension. If there
@ -245,6 +248,8 @@ pre-populated content.")
home-activation-service-type
home-xdg-user-directories-activation-service)))
(default-value (home-xdg-user-directories-configuration))
(compose identity)
(extend last-extension-or-cfg)
(description "Configure XDG user directories. To
disable a directory, point it to the $HOME.")))

30
gnu/installer/final.scm
View file

@ -1,6 +1,6 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2018, 2020 Mathieu Othacehe <m.othacehe@gmail.com>
;;; Copyright © 2019, 2020 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2019, 2020, 2022 Ludovic Courtès <ludo@gnu.org>
;;;
;;; This file is part of GNU Guix.
;;;
@ -114,6 +114,8 @@ it can interact with the rest of the system."
;; Catch SIGINT and kill the container process.
(sigaction SIGINT
(lambda (signum)
;: FIXME: Use of SIGKILL prevents the dynamic-wind exit handler of
;; THUNK to run.
(false-if-exception
(kill pid SIGKILL))))
@ -196,14 +198,16 @@ or #f. Return #t on success and #f on failure."
;; the loaded cow-store locale files will prevent umounting.
(install-locale locale)
;; Save the database, so that it can be restored once the
;; cow-store is umounted.
;; Stop the daemon and save the database, so that it can be
;; restored once the cow-store is umounted.
(stop-service 'guix-daemon)
(copy-file database-file saved-database)
(installer-log-line "mounting copy-on-write store")
(mount-cow-store (%installer-target-dir) backing-directory))
(lambda ()
;; We need to drag the guix-daemon to the container MNT
;; namespace, so that it can operate on the cow-store.
(stop-service 'guix-daemon)
(start-service 'guix-daemon (list (number->string (getpid))))
(setvbuf (current-output-port) 'none)
@ -213,11 +217,25 @@ or #f. Return #t on success and #f on failure."
(set! ret (run-command install-command #:tty? #t)))
(lambda ()
;; Restart guix-daemon so that it does no keep the MNT namespace
;; Stop guix-daemon so that it does no keep the MNT namespace
;; alive.
(restart-service 'guix-daemon)
(stop-service 'guix-daemon)
;; Restore the database and restart it. As part of restoring the
;; database, remove the WAL and shm files in case they were left
;; behind after guix-daemon was stopped. Failing to do so,
;; sqlite might behave as if transactions that appear in the WAL
;; file were committed. (See <https://www.sqlite.org/wal.html>.)
(installer-log-line "restoring store database from '~a'"
saved-database)
(copy-file saved-database database-file)
(for-each (lambda (suffix)
(false-if-exception
(delete-file (string-append database-file suffix))))
'("-wal" "-shm"))
(start-service 'guix-daemon)
;; Finally umount the cow-store and exit the container.
(installer-log-line "unmounting copy-on-write store")
(unmount-cow-store (%installer-target-dir) backing-directory)
(assert-exit ret))))))))

2
gnu/installer/newt.scm
View file

@ -116,7 +116,7 @@ report it by email to ~a.") uploaded-name %guix-bug-report-address)
(define command-output "")
(define (line-accumulator line)
(set! command-output
(string-append/shared command-output line "\n")))
(string-append/shared command-output line)))
(define result (run-external-command-with-line-hooks (list line-accumulator)
args))
(define exit-val (status:exit-val result))

26
gnu/installer/utils.scm
View file

@ -1,6 +1,6 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2018, 2020 Mathieu Othacehe <m.othacehe@gmail.com>
;;; Copyright © 2019, 2020 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2019, 2020, 2022 Ludovic Courtès <ludo@gnu.org>
;;;
;;; This file is part of GNU Guix.
;;;
@ -159,7 +159,9 @@ COMMAND will be run in a pseudoterminal. Returns the integer status value of
the child process as returned by waitpid."
(define (handler input)
(and
(and=> (get-line input)
;; Lines for progress bars etc. end in \r; treat is as a line ending so
;; those lines are printed right away.
(and=> (read-delimited "\r\n" input 'concat)
(lambda (line)
(if (eof-object? line)
#f
@ -186,7 +188,7 @@ in a pseudoterminal."
(installer-log-line "running command ~s" command)
(define result (run-external-command-with-line-hooks
(list %display-line-hook) command
(list display) command
#:tty? tty?))
(define exit-val (status:exit-val result))
(define term-sig (status:term-sig result))
@ -264,7 +266,10 @@ values."
(or port (%make-void-port "w")))))
(define (%syslog-line-hook line)
(format (syslog-port) "installer[~d]: ~a~%" (getpid) line))
(let ((line (if (string-suffix? "\r" line)
(string-append (string-drop-right line 1) "\n")
line)))
(format (syslog-port) "installer[~d]: ~a" (getpid) line)))
(define-syntax syslog
(lambda (s)
@ -293,11 +298,7 @@ values."
port)))
(define (%installer-log-line-hook line)
(format (installer-log-port) "~a~%" line))
(define (%display-line-hook line)
(display line)
(newline))
(display line (installer-log-port)))
(define %default-installer-line-hooks
(list %syslog-line-hook
@ -309,9 +310,10 @@ values."
(syntax-case s ()
((_ fmt args ...)
(string? (syntax->datum #'fmt))
#'(let ((formatted (format #f fmt args ...)))
(for-each (lambda (f) (f formatted))
%default-installer-line-hooks))))))
(with-syntax ((fmt (string-append (syntax->datum #'fmt) "\n")))
#'(let ((formatted (format #f fmt args ...)))
(for-each (lambda (f) (f formatted))
%default-installer-line-hooks)))))))
;;;

17
gnu/local.mk
View file

@ -671,6 +671,7 @@ GNU_SYSTEM_MODULES = \
%D%/services/guix.scm \
%D%/services/hurd.scm \
%D%/services/kerberos.scm \
%D%/services/ldap.scm \
%D%/services/lightdm.scm \
%D%/services/linux.scm \
%D%/services/lirc.scm \
@ -962,8 +963,6 @@ dist_patch_DATA = \
%D%/packages/patches/cdrkit-libre-cross-compile.patch \
%D%/packages/patches/cdrtools-3.01-mkisofs-isoinfo.patch \
%D%/packages/patches/ceph-disable-cpu-optimizations.patch \
%D%/packages/patches/ceph-boost-compat.patch \
%D%/packages/patches/ceph-rocksdb-compat.patch \
%D%/packages/patches/chmlib-inttypes.patch \
%D%/packages/patches/cl-asdf-config-directories.patch \
%D%/packages/patches/clamav-config-llvm-libs.patch \
@ -1111,6 +1110,7 @@ dist_patch_DATA = \
%D%/packages/patches/firebird-riscv64-support-pt1.patch \
%D%/packages/patches/firebird-riscv64-support-pt2.patch \
%D%/packages/patches/flann-cmake-3.11.patch \
%D%/packages/patches/flashrom-fix-building-on-aarch64.patch \
%D%/packages/patches/flatpak-fix-path.patch \
%D%/packages/patches/flatpak-unset-gdk-pixbuf-for-sandbox.patch \
%D%/packages/patches/fontconfig-cache-ignore-mtime.patch \
@ -1344,14 +1344,7 @@ dist_patch_DATA = \
%D%/packages/patches/isl-0.11.1-aarch64-support.patch \
%D%/packages/patches/itk-snap-alt-glibc-compat.patch \
%D%/packages/patches/jami-disable-integration-tests.patch \
%D%/packages/patches/jami-fix-qml-imports.patch \
%D%/packages/patches/jami-fix-unit-tests-build.patch \
%D%/packages/patches/jami-libjami-headers-search.patch \
%D%/packages/patches/jami-no-webengine.patch \
%D%/packages/patches/jami-sipaccount-segfault.patch \
%D%/packages/patches/jami-sip-contacts.patch \
%D%/packages/patches/jami-sip-unregister.patch \
%D%/packages/patches/jami-xcb-link.patch \
%D%/packages/patches/jamvm-1.5.1-aarch64-support.patch \
%D%/packages/patches/jamvm-1.5.1-armv7-support.patch \
%D%/packages/patches/jamvm-2.0.0-aarch64-support.patch \
@ -1377,9 +1370,9 @@ dist_patch_DATA = \
%D%/packages/patches/json-c-0.12-CVE-2020-12762.patch \
%D%/packages/patches/jsoncpp-pkg-config-version.patch \
%D%/packages/patches/julia-SOURCE_DATE_EPOCH-mtime.patch \
%D%/packages/patches/julia-tracker-16-compat.patch \
%D%/packages/patches/libffi-3.3-powerpc-fixes.patch \
%D%/packages/patches/libffi-float128-powerpc64le.patch \
%D%/packages/patches/libgeotiff-fix-tests-with-proj-9.1.1.patch \
%D%/packages/patches/libobjc2-unbundle-robin-map.patch \
%D%/packages/patches/librime-fix-build-with-gcc10.patch \
%D%/packages/patches/libvirt-add-install-prefix.patch \
@ -1606,6 +1599,7 @@ dist_patch_DATA = \
%D%/packages/patches/onnx-use-system-googletest.patch \
%D%/packages/patches/onnx-shared-libraries.patch \
%D%/packages/patches/onnx-skip-model-downloads.patch \
%D%/packages/patches/openbios-gcc-warnings.patch \
%D%/packages/patches/openboardview-use-system-imgui.patch \
%D%/packages/patches/openbox-python3.patch \
%D%/packages/patches/opencascade-oce-glibc-2.26.patch \
@ -1642,6 +1636,7 @@ dist_patch_DATA = \
%D%/packages/patches/python-louvain-fix-test.patch \
%D%/packages/patches/python-random2-getrandbits-test.patch \
%D%/packages/patches/python-poppler-qt5-fix-build.patch \
%D%/packages/patches/python-telingo-fix-comparison.patch \
%D%/packages/patches/python-w3lib-fix-test-failure.patch \
%D%/packages/patches/sdcc-disable-non-free-code.patch \
%D%/packages/patches/sdl-pango-api_additions.patch \
@ -1719,7 +1714,6 @@ dist_patch_DATA = \
%D%/packages/patches/python-3-fix-tests.patch \
%D%/packages/patches/python-3-hurd-configure.patch \
%D%/packages/patches/python-3-no-static-lib.patch \
%D%/packages/patches/python-apsw-3.39.2.1-test-fix.patch \
%D%/packages/patches/python-aionotify-0.2.0-py3.8.patch \
%D%/packages/patches/python-argcomplete-1.11.1-fish31.patch \
%D%/packages/patches/python-cross-compile.patch \
@ -1729,7 +1723,6 @@ dist_patch_DATA = \
%D%/packages/patches/python-docopt-pytest6-compat.patch \
%D%/packages/patches/python-execnet-read-only-fix.patch \
%D%/packages/patches/python-fixtures-remove-monkeypatch-test.patch \
%D%/packages/patches/python-flask-restful-werkzeug-compat.patch \
%D%/packages/patches/python-ipython-documentation-chars.patch \
%D%/packages/patches/python-ipython-documentation-repro.patch \
%D%/packages/patches/python-keras-integration-test.patch \

50
gnu/packages/admin.scm
View file

@ -1409,14 +1409,14 @@ connection alive.")
bind-release-version)))
(package
(name "isc-dhcp")
(version "4.4.3")
(version "4.4.3-P1")
(source (origin
(method url-fetch)
(uri (string-append "https://ftp.isc.org/isc/dhcp/"
version "/dhcp-" version ".tar.gz"))
(sha256
(base32
"062q2g8cj2zv0zv22x6pg21m21bdlscxkg3li0ac0pm0qasccghf"))))
"1ivkvhhvqxap6c51cli7pa6xn76ngxri1zbl45ishz4ranxidi0a"))))
(build-system gnu-build-system)
(arguments
`(#:parallel-build? #f
@ -1559,7 +1559,10 @@ connection alive.")
(description
"ISC's Dynamic Host Configuration Protocol (DHCP) distribution provides a
reference implementation of all aspects of DHCP, through a suite of DHCP
tools: server, client, and relay agent.")
tools: server, client, and relay agent.
This software is @emph{end-of-life}! ISC does not intend to issue any further
maintenance releases.")
(license license:mpl2.0)
(properties '((cpe-name . "dhcp"))))))
@ -1802,7 +1805,7 @@ over ssh connections.")
(define-public realmd
(package
(name "realmd")
(version "0.17.0")
(version "0.17.1")
(source
(origin
(method git-fetch)
@ -1811,8 +1814,7 @@ over ssh connections.")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"1c6q2a86kk2f1akzc36nh52hfwsmmc0mbp6ayyjxj4zsyk9zx5bf"))))
(base32 "063cf4jkpfj548a7dxmffrpbh3j413nq3zy1zzj20lcfffnnaqwn"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags '("--with-systemd-unit-dir=no"
@ -3919,13 +3921,13 @@ you are running, what theme or icon set you are using, etc.")
(define-public hyfetch
(package
(name "hyfetch")
(version "1.4.1")
(version "1.4.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "HyFetch" version))
(sha256
(base32 "18s8r63aqyah34vbahccgkiqw4008i2w5kvhqd9s8bdd4yvsrn4n"))))
(base32 "1k3pcl16y2czkk7wd79yk0w1kqpi4fp8h8szhjs5ywwy20nqmms8"))))
(build-system python-build-system)
(inputs (list python-hypy-utils python-typing-extensions))
(arguments `(#:phases (modify-phases %standard-phases
@ -4085,14 +4087,14 @@ information tool.")
(define-public nnn
(package
(name "nnn")
(version "4.6")
(version "4.7")
(source
(origin
(method url-fetch)
(uri (string-append "https://github.com/jarun/nnn/releases/download/v"
version "/nnn-v" version ".tar.gz"))
(sha256
(base32 "0gvyvynw957yirvc1aj65flzni7niaj5bvyk82ka5dfgi2dazb0m"))))
(base32 "0dbm54m3iv8hzar38dsfxh77z4mlpjj649ga82s0wwms4vlrm5pg"))))
(build-system gnu-build-system)
(inputs
(list ncurses readline))
@ -4309,7 +4311,7 @@ Python loading in HPC environments.")
(let ((real-name "inxi"))
(package
(name "inxi-minimal")
(version "3.3.23-1")
(version "3.3.24-1")
(source
(origin
(method git-fetch)
@ -4318,12 +4320,12 @@ Python loading in HPC environments.")
(commit version)))
(file-name (git-file-name real-name version))
(sha256
(base32 "0bpaffv4zqinfk46sbx82gic7572xsqiwb1lf894l1s6a6xi7zrd"))))
(base32 "1nai43251r791qvc1c4hhvcaa6hq7zcjlww7k3ip7br6zgxqjaxm"))))
(build-system trivial-build-system)
(inputs
`(("bash" ,bash-minimal)
("perl" ,perl)
("procps" ,procps)))
(list bash-minimal
perl
procps))
(native-inputs
(list gzip))
(arguments
@ -4333,10 +4335,14 @@ Python loading in HPC environments.")
(use-modules (guix build utils)
(ice-9 match)
(srfi srfi-26))
(setenv "PATH" (string-append
(assoc-ref %build-inputs "bash") "/bin" ":"
(assoc-ref %build-inputs "gzip") "/bin" ":"
(assoc-ref %build-inputs "perl") "/bin" ":"))
(setenv "PATH" (string-join
(map (lambda (file)
(dirname (search-input-file %build-inputs
file)))
(list "bin/bash"
"bin/gzip"
"bin/perl"))
":"))
(copy-recursively (assoc-ref %build-inputs "source")
,(string-append real-name "-" version))
(with-directory-excursion ,(string-append real-name "-" version)
@ -4853,7 +4859,7 @@ entries, providing commands to add, remove, comment, and search.")
(define-public nmrpflash
(package
(name "nmrpflash")
(version "0.9.16")
(version "0.9.19")
(source
(origin
(method git-fetch)
@ -4862,7 +4868,7 @@ entries, providing commands to add, remove, comment, and search.")
(url "https://github.com/jclehner/nmrpflash")
(commit (string-append "v" version))))
(sha256
(base32 "0gp66l3a2wznjnlc2ljs8g38mfrf1b9a0qcfxqg2bczmfxnrsynj"))
(base32 "02r2z3mnbj8dfka7adw1l76zq1jh1l13mmkns93c54ychs44jz3d"))
(file-name (git-file-name name version))))
(build-system gnu-build-system)
(native-inputs
@ -4881,7 +4887,7 @@ entries, providing commands to add, remove, comment, and search.")
(lambda* (#:key outputs #:allow-other-keys)
(mkdir-p (string-append (assoc-ref outputs "out") "/bin")))))))
(home-page "https://github.com/jclehner/nmrpflash")
(synopsis "Netgear unbrick utility")
(synopsis "Reflash (``unbrick'') Netgear devices with corrupted firmware")
(description "This package provides a utility to flash a new firmware
image to a Netgear device. It has been tested on Netgear EX2700, EX6120,
EX6150v2, DNG3700v2, R6100, R6220, R7000, D7000, WNR3500, R6400, R6800,

4
gnu/packages/algebra.scm
View file

@ -327,7 +327,7 @@ precision.")
(define-public giac
(package
(name "giac")
(version "1.9.0-29")
(version "1.9.0-33")
(source
(origin
(method url-fetch)
@ -339,7 +339,7 @@ precision.")
"~parisse/debian/dists/stable/main/source/"
"giac_" version ".tar.gz"))
(sha256
(base32 "03hbg5b0xmdfp919mxn5lsard1mwg1kcm9xrm8gk7wnmr9r1adgn"))))
(base32 "00hdfakys4xpvmf2v851dr4hf3j6483pwwkfy5i63s5hs10mjsq5"))))
(build-system gnu-build-system)
(arguments
(list

2
gnu/packages/arcan.scm
View file

@ -123,7 +123,7 @@
(files '("share/arcan/scripts")))))
(inputs
`(("apr" ,apr)
("ffmpeg" ,ffmpeg)
("ffmpeg" ,ffmpeg-4)
("freetype" ,freetype)
("glib" ,glib)
("glu" ,glu)

8
gnu/packages/aspell.scm
View file

@ -320,6 +320,14 @@ dictionaries, including personal ones.")
(base32
"0w2k5l5rbqpliripgqwiqixz5ghnjf7i9ggbrc4ly4vy1ia10rmc")))
(define-public aspell-dict-nb
(aspell-dictionary "nb" "Norwegian Bokmål"
#:version "0.50.1-2"
#:prefix "aspell-"
#:sha256
(base32
"1xvns7dwx2sc0msldj7r2hv0426913rg3dpnkxlrvnsyrxzjpbpc")))
(define-public aspell-dict-pl
(aspell-dictionary "pl" "Polish"
#:version "0.51-0"

8
gnu/packages/astronomy.scm
View file

@ -813,7 +813,7 @@ astronomical fields. SkyMaker is part of the EFIGI
(native-inputs
(list pkg-config))
(inputs
(list gtkmm-3 libskry ffmpeg))
(list gtkmm-3 libskry ffmpeg-4))
(home-page "https://github.com/GreatAttractor/stackistry")
(synopsis "Astronomical lucky imaging/image stacking tool")
(description
@ -1714,7 +1714,7 @@ arrays with NumPy as its only dependency.")
(copy-recursively "include" include))
#t)))))
(inputs
(list ffmpeg))
(list ffmpeg-4))
(home-page "https://github.com/GreatAttractor/libskry")
(synopsis "Astronimical lucky imaging library")
(description
@ -2505,13 +2505,13 @@ install an implementation package such as asdf-astropy.")
(define-public python-asdf-astropy
(package
(name "python-asdf-astropy")
(version "0.2.2")
(version "0.3.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "asdf_astropy" version))
(sha256
(base32 "1b0v4cl7xvly3x1k5k2rvc2l32jqgqp0iyf1j20fkvj450sx74f2"))))
(base32 "1gp5iav0a9g9q0zb22vhzi3v9vwk5wn2nxvr3mvi3bsdcdj3h23v"))))
(build-system pyproject-build-system)
(native-inputs
(list python-coverage

33
gnu/packages/audio.scm
View file

@ -603,7 +603,11 @@ Filter) modules follow the convention of 1V / Octave.")
"--enable-samplerate"
"--enable-avcodec")))
(inputs
(list jack-1 libsndfile libsamplerate fftwf ffmpeg)) ; for libavcodec
(list jack-1
libsndfile
libsamplerate
ffmpeg-4 ;for libavcodec
fftwf))
(native-inputs
(list pkg-config))
(home-page "https://aubio.org/")
@ -849,26 +853,16 @@ engineers, musicians, soundtrack editors and composers.")
(define-public audacity
(package
(name "audacity")
(version "3.2.1")
(version "3.2.2")
(source
(origin
;; If built from the release tag, Audacity will describe itself
;; as an "Alpha test version" and suggest to users that they use
;; the "latest stable released version".
;; XXX: For 3.2.1 we rebelliously use a git tag anyway because the only
;; "processed" download is a .zip containing a .tar.gz which does not
;; fare well with the patch and snippet machinery:
;; https://github.com/audacity/audacity/issues/3811
;; TODO: Find a way to control the "alpha" status even when using git
;; so we're not reliant on preprocessed source code.
(method git-fetch)
(uri (git-reference
(url "https://github.com/audacity/audacity")
(commit (string-append "Audacity-" version))))
(file-name (git-file-name name version))
(sha256
(base32
"00mal30jxbcacs1ka4yb5s8xq81zm7mv3y8l5hvg77abkyvfvdzf"))
(base32 "1akp9marc4y2g9mwwgfnl43q0gbb2dv7vhsnybh8wdn8ql30hfdw"))
(patches (search-patches "audacity-ffmpeg-fallback.patch"))
(modules '((guix build utils)))
(snippet
@ -936,7 +930,11 @@ engineers, musicians, soundtrack editors and composers.")
;; TODO: enable this flag once we've packaged all dependencies
;; "-Daudacity_obey_system_dependencies=on"
;; disable crash reports, updates, ..., anything that phones home
"-Daudacity_has_networking=off")
"-Daudacity_has_networking=off"
;; When building from Git — even from a release tag — this is undefined,
;; and Audacity assumes that is is an ‘alpha’ version and includes debug
;; symbols and extra code. Force level 2, ‘release’.
"-DAUDACITY_BUILD_LEVEL=2")
#:imported-modules ((guix build glib-or-gtk-build-system)
,@%cmake-build-system-modules)
#:modules
@ -4442,7 +4440,7 @@ simplified, although really accurate, measuring tools.")
,home-page))
#t))))
(build-system gnu-build-system)
(inputs (list ffmpeg sox))
(inputs (list ffmpeg-4 sox))
(synopsis "Tool to adjust loudness of media files")
(description
"BS1770GAIN is a loudness scanner compliant with ITU-R BS.1770 and its
@ -5061,7 +5059,7 @@ stream to one or more IceCast and/or ShoutCast servers.")
(define-public libltc
(package
(name "libltc")
(version "1.3.1")
(version "1.3.2")
(source
(origin
(method url-fetch)
@ -5069,8 +5067,7 @@ stream to one or more IceCast and/or ShoutCast servers.")
(string-append "https://github.com/x42/libltc/releases/download/v"
version "/libltc-" version ".tar.gz"))
(sha256
(base32
"173h9dgmain3nyrwk6q2d7yl4fnh4vacag4s2p01n5b7nyrkxrjh"))))
(base32 "0j8j7cnw02arh8122d13bwkps1c0mi2xqq55gyi2bs91dk6l4v8a"))))
(build-system gnu-build-system)
(arguments
`(#:parallel-tests? #f)) ;tests fail otherwise

4
gnu/packages/backup.scm
View file

@ -633,13 +633,13 @@ detection, and lossless compression.")
(define-public borg
(package
(name "borg")
(version "1.2.2")
(version "1.2.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "borgbackup" version))
(sha256
(base32 "0q3jwmwwa3jlb02cbkcgh5a9cvwg64vawaypn41bdgpi8ds6hc6p"))
(base32 "11b7jqv9sw22a9512b270d12k3mrcgmmcaimh6bgm5iwcgw1h973"))
(modules '((guix build utils)))
(snippet
#~(begin

4
gnu/packages/benchmark.scm
View file

@ -72,14 +72,14 @@
(define-public fio
(package
(name "fio")
(version "3.32")
(version "3.33")
(source (origin
(method url-fetch)
(uri (string-append "https://brick.kernel.dk/snaps/"
"fio-" version ".tar.bz2"))
(sha256
(base32
"0wlfzx6zwkp81fwqw0pqm9i7v0b89rpfbliwxdd8q4kp4mf3q2dv"))))
"083c1w8jqkvyw7wcy69142inlikzmk1k78mk973rnqdp3a7798qb"))))
(build-system gnu-build-system)
(arguments
(list #:modules

465
gnu/packages/bioconductor.scm
View file

@ -2202,6 +2202,53 @@ conditions or various species. @code{AMOUNTAIN} aims to search active modules
in multi-layer WGCN using a continuous optimization approach.")
(license license:gpl2+)))
(define-public r-amplican
(package
(name "r-amplican")
(version "1.20.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "amplican" version))
(sha256
(base32
"1c990i6gxbarcpbdpkz017x94spwzap95l95synlizbkyif4z8ij"))))
(properties `((upstream-name . "amplican")))
(build-system r-build-system)
(propagated-inputs
(list r-biocgenerics
r-biocparallel
r-biostrings
r-clustercrit
r-data-table
r-dplyr
r-genomeinfodb
r-genomicranges
r-ggplot2
r-ggthemes
r-gridextra
r-gtable
r-iranges
r-knitr
r-matrix
r-matrixstats
r-rcpp
r-rmarkdown
r-s4vectors
r-shortread
r-stringr
r-waffle))
(native-inputs (list r-knitr))
(home-page "https://github.com/valenlab/amplican")
(synopsis "Automated analysis of CRISPR experiments")
(description
"The package performs alignment of the amplicon reads, normalizes
gathered data, calculates multiple statistics (e.g. cut rates, frameshifts)
and presents the results in the form of aggregated reports. Data and
statistics can be broken down by experiments, barcodes, user defined groups,
guides and amplicons allowing for quick identification of potential
problems.")
(license license:gpl3)))
(define-public r-amaretto
(package
(name "r-amaretto")
@ -2287,13 +2334,13 @@ analysis, modelling, and visualization of spike-in controls.")
(define-public r-ancombc
(package
(name "r-ancombc")
(version "2.0.1")
(version "2.0.2")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "ANCOMBC" version))
(sha256
(base32
"1bwzvi6j3s66dcll1lb4xy25j4nfn1ln6mc3flh0wgy13l26x8m6"))))
"0dlinv4vhxgni8ygzvfw8pbc6d1v9x5chhrpxblhs2c65bkgyxz5"))))
(properties `((upstream-name . "ANCOMBC")))
(build-system r-build-system)
(propagated-inputs
@ -2337,6 +2384,65 @@ Methodologies included in the @code{ANCOMBC} package were designed to correct
these biases and construct statistically consistent estimators.")
(license license:artistic2.0)))
(define-public r-animalcules
(package
(name "r-animalcules")
(version "1.14.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "animalcules" version))
(sha256
(base32
"1alpsamrglgvzhcibkaf7m3gyiv61wbj1gvsq4lw6vjka100j9qr"))))
(properties `((upstream-name . "animalcules")))
(build-system r-build-system)
(propagated-inputs
(list r-ape
r-assertthat
r-biomformat
r-caret
r-covr
r-deseq2
r-dplyr
r-dt
r-forcats
r-ggplot2
r-glmnet
r-gunifrac
r-lattice
r-limma
r-magrittr
r-matrix
r-multiassayexperiment
r-plotly
r-plotroc
r-rentrez
r-reshape2
r-s4vectors
r-scales
r-shiny
r-shinyjs
r-summarizedexperiment
r-tibble
r-tsne
r-umap
r-vegan
r-xml))
(native-inputs (list r-knitr))
(home-page "https://github.com/compbiomed/animalcules")
(synopsis "Interactive microbiome analysis toolkit")
(description
"Animalcules is an R package for utilizing up-to-date data analytics,
visualization methods, and machine learning models to provide users an
easy-to-use interactive microbiome analysis framework. It can be used as a
standalone software package or users can explore their data with the
accompanying interactive R Shiny application. Traditional microbiome analysis
such as alpha/beta diversity and differential abundance analysis are enhanced,
while new methods like biomarker identification are introduced by animalcules.
Powerful interactive and dynamic figures generated by animalcules enable users
to understand their data better and discover new insights.")
(license license:artistic2.0)))
(define-public r-aldex2
(package
(name "r-aldex2")
@ -2492,6 +2598,37 @@ mapped reads). It is currently designed for un-stranded paired-end RNA-seq
data.")
(license license:gpl2+)))
(define-public r-altcdfenvs
(package
(name "r-altcdfenvs")
(version "2.60.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "altcdfenvs" version))
(sha256
(base32
"0fm4l93j6nm1w1w57zzryc1hkzapp8l16pkwjzdzllvwvsnsg8r0"))))
(properties `((upstream-name . "altcdfenvs")))
(build-system r-build-system)
(propagated-inputs
(list r-affy
r-biobase
r-biocgenerics
r-biostrings
r-hypergraph
r-makecdfenv
r-s4vectors))
(home-page "https://bioconductor.org/packages/altcdfenvs")
(synopsis
"Convenience data structures and functions to handle CDF environments")
(description
"The package is usable with Affymetrix GeneChip short oligonucleotide
arrays, and it can be adapted or extended to other platforms. It is able to
modify or replace the grouping of probes in the probe sets. Also, the package
contains simple functions to read R connections in the FASTA format and it can
create an alternative mapping from sequences.")
(license license:gpl2+)))
(define-public r-aneufinder
(package
(name "r-aneufinder")
@ -2720,6 +2857,40 @@ biological knowledge. Genes, and clinical pathways are incorporated in the
model as latent variables.")
(license license:gpl3)))
(define-public r-asics
(package
(name "r-asics")
(version "2.14.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "ASICS" version))
(sha256
(base32
"0c2b3gdza58vqhharhw8967p2w2knnrm5s2svvnnjbf67qbg45b7"))))
(properties `((upstream-name . "ASICS")))
(build-system r-build-system)
(propagated-inputs
(list r-biocparallel
r-ggplot2
r-glmnet
r-gridextra
r-matrix
r-mvtnorm
r-pepsnmr
r-plyr
r-quadprog
r-ropls
r-summarizedexperiment
r-zoo))
(native-inputs (list r-knitr))
(home-page "https://bioconductor.org/packages/ASICS")
(synopsis "Automatic statistical identification in complex spectra")
(description
"ASICS quantifies concentration of metabolites in a complex spectrum.
The identification of metabolites is performed by fitting a mixture model to
the spectra of the library with a sparse penalty.")
(license license:gpl2+)))
(define-public r-aspli
(package
(name "r-aspli")
@ -3121,13 +3292,13 @@ Various visual and textual types of output are available.")
(define-public r-bambu
(package
(name "r-bambu")
(version "3.0.2")
(version "3.0.5")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "bambu" version))
(sha256
(base32
"0246cn5l1kxysjrzy4prfdxn71vc47a8kciqw384nm2mi3vsy4vx"))))
"12rcbspy4ly714cyxbgd5v2m92vasksxm19m6hd4avasrhcr4d6l"))))
(properties `((upstream-name . "bambu")))
(build-system r-build-system)
(propagated-inputs
@ -3164,13 +3335,13 @@ usage.")
(define-public r-bandits
(package
(name "r-bandits")
(version "1.14.0")
(version "1.14.1")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "BANDITS" version))
(sha256
(base32
"18xq8gg1j07gbbxy7r0cc34zwn40mh4fr39zzi8l3z0cymw73qs8"))))
"0dbiz7zgdl3bqrwf4ffb73sc2dd8ygh76fakx5887a14azj8pk8x"))))
(properties `((upstream-name . "BANDITS")))
(build-system r-build-system)
(propagated-inputs
@ -3309,6 +3480,44 @@ of Bioconductor.")
packages.")
(license license:artistic2.0)))
(define-public r-cardelino
(package
(name "r-cardelino")
(version "1.0.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "cardelino" version))
(sha256
(base32
"1ma4clkrkrjvy12ln2d2smyzzsz9y9554f5wgwmh9kv6s4xc66qs"))))
(properties `((upstream-name . "cardelino")))
(build-system r-build-system)
(propagated-inputs (list r-combinat
r-genomeinfodb
r-genomicranges
r-ggplot2
r-ggtree
r-matrix
r-matrixstats
r-pheatmap
r-s4vectors
r-snpstats
r-variantannotation
r-vcfr))
(native-inputs (list r-knitr))
(home-page "https://github.com/single-cell-genetics/cardelino")
(synopsis "Clone identification from single cell data")
(description
"This package provides methods to infer clonal tree configuration for a
population of cells using single-cell RNA-seq data (scRNA-seq), and possibly
other data modalities. Methods are also provided to assign cells to inferred
clones and explore differences in gene expression between clones. These
methods can flexibly integrate information from imperfect clonal trees
inferred based on bulk exome-seq data, and sparse variant alleles expressed in
scRNA-seq data. A flexible beta-binomial error model that accounts for
stochastic dropout events as well as systematic allelic imbalance is used.")
(license license:gpl3)))
(define-public r-coverageview
(package
(name "r-coverageview")
@ -3391,13 +3600,13 @@ factorial microarray data.")
(define-public r-damefinder
(package
(name "r-damefinder")
(version "1.10.0")
(version "1.10.1")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "DAMEfinder" version))
(sha256
(base32
"0ygsgg51473sycsh367rf8plca6zb1jg2l39zcprwvgpiln8mjdg"))))
"1cgykb70mxnhilwwp1jr4dr523zvjxpix173s4ldfh49064gzwc1"))))
(properties `((upstream-name . "DAMEfinder")))
(build-system r-build-system)
(propagated-inputs
@ -3705,13 +3914,13 @@ negative control samples.")
(define-public r-deconvr
(package
(name "r-deconvr")
(version "1.4.2")
(version "1.4.3")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "deconvR" version))
(sha256
(base32
"1wa8l9zxdwx32122slnzqyk32klyznxnbziwn98jbp5fxmjka92l"))))
"1jz7q4rv3m85bcvarjhqsyc2330fynb0wr5ajd2qffznczk846xb"))))
(properties `((upstream-name . "deconvR")))
(build-system r-build-system)
(propagated-inputs
@ -3727,6 +3936,7 @@ negative control samples.")
r-mass
r-matrixstats
r-methylkit
r-minfi
r-nnls
r-quadprog
r-rsq
@ -4787,13 +4997,13 @@ only one command.")
(define-public r-biocparallel
(package
(name "r-biocparallel")
(version "1.32.3")
(version "1.32.4")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "BiocParallel" version))
(sha256
(base32
"0z2g3p6ip4g865na9bmqaa7w2s52769pmjr3hpiv6x8bhifh3nm5"))))
"1m4i27zx3ajwygwp38lrxf36rs575dkaxxc6jawpj1kzn7whi5ym"))))
(properties
`((upstream-name . "BiocParallel")))
(build-system r-build-system)
@ -5154,26 +5364,26 @@ distribution.")
(define-public r-deseq2
(package
(name "r-deseq2")
(version "1.38.1")
(version "1.38.2")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "DESeq2" version))
(sha256
(base32
"0xp3rfhwn8k1bqzqnjzjqlaq8lqyad7kqjhb29vkbxgzjvafvxmk"))))
"1m81yvcl63h5m7kbbxpjk7hzygxmn4l9mlgqrdmnnls56183h3b4"))))
(properties `((upstream-name . "DESeq2")))
(build-system r-build-system)
(propagated-inputs
(list r-biobase
r-biocgenerics
r-biocparallel
r-genefilter
r-geneplotter
r-genomicranges
r-ggplot2
r-iranges
r-locfit
r-matrixstats
r-rcpp
r-rcpparmadillo
r-s4vectors
@ -5386,13 +5596,13 @@ global-scaling and full-quantile normalization.")
(define-public r-edger
(package
(name "r-edger")
(version "3.40.0")
(version "3.40.1")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "edgeR" version))
(sha256
(base32
"18vap3qp9blncr4sdl9q1szb4qhm46gldhxy3k3abw9fckcvggwg"))))
"1a0rmczlqmqmip2ix28m4iwcpfj04p6nrcl562bjgaifvgyjqhzg"))))
(properties `((upstream-name . "edgeR")))
(build-system r-build-system)
(propagated-inputs
@ -5511,14 +5721,14 @@ analysis using other methods.")
(define-public r-genefilter
(package
(name "r-genefilter")
(version "1.80.0")
(version "1.80.2")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "genefilter" version))
(sha256
(base32
"0swdqdyz956gx44crbx3qai0qx7n7yazg3yw7i93djcgahyz3kk7"))))
"0f25z0hqmrkimv14j03pgjsxpq5rz9ymk151rlg4j4vpc06n73cq"))))
(build-system r-build-system)
(native-inputs
(list gfortran r-knitr))
@ -5601,13 +5811,13 @@ genomic intervals. In addition, it can use BAM or BigWig files as input.")
(define-public r-genomeinfodb
(package
(name "r-genomeinfodb")
(version "1.34.3")
(version "1.34.4")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "GenomeInfoDb" version))
(sha256
(base32
"1pw8ml6b33z7zh7h592xl23l8dy32nqq4lzq20p57n9f0krqj1iv"))))
"1nskqmlar85zg96c1fbacl7dqg6r0gl814rc7yh482y4wgmwyg0r"))))
(properties
`((upstream-name . "GenomeInfoDb")))
(build-system r-build-system)
@ -5661,13 +5871,13 @@ alignments.")
(define-public r-genomicfeatures
(package
(name "r-genomicfeatures")
(version "1.50.2")
(version "1.50.3")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "GenomicFeatures" version))
(sha256
(base32
"10w15j107hy9qb0lh6jmyw7rinfvy3ca34xsskxw3wf25mh6vhzz"))))
"14pn7lngayascj5k84g2g748assbivpiakss247cdj9ngzx5sfwz"))))
(properties
`((upstream-name . "GenomicFeatures")))
(build-system r-build-system)
@ -5739,13 +5949,13 @@ provide added flexibility for data combination and manipulation.")
(define-public r-genomicranges
(package
(name "r-genomicranges")
(version "1.50.1")
(version "1.50.2")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "GenomicRanges" version))
(sha256
(base32
"14m4pvvd9m8kpc7k905km9vib7giq0i9g11bxc1ygw30ifi96966"))))
"13b6bm6nrxx1vgzrzpf59c2lq5w8kjq9hsch5h037f0p9w3w5z9p"))))
(properties
`((upstream-name . "GenomicRanges")))
(build-system r-build-system)
@ -5823,6 +6033,33 @@ testing and other simple calculations.")
Enrichment Analysis} (GSEA).")
(license license:artistic2.0)))
(define-public r-harshlight
(package
(name "r-harshlight")
(version "1.70.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "Harshlight" version))
(sha256
(base32
"0asjgcnwawg8x7ql0srhb2011rvb4kr2cpsa1cy28nfmjfvdf0qm"))))
(properties `((upstream-name . "Harshlight")))
(build-system r-build-system)
(propagated-inputs
(list r-affy
r-altcdfenvs
r-biobase))
(home-page "http://asterion.rockefeller.edu/Harshlight/")
(synopsis "Corrective make-up program for microarray chips")
(description
"The package detects extended diffuse and compact blemishes on microarray
chips. Harshlight marks the areas in a collection of chips (affybatch
objects). A corrected @code{AffyBatch} object will result. The package
replaces the defected areas with @code{N/A}s or the median of the values of
the same probe. The new version handles the substitute value as a whole
matrix to solve the memory problem.")
(license license:gpl2+)))
(define-public r-hpar
(package
(name "r-hpar")
@ -5875,13 +6112,13 @@ of other R packages who wish to make use of HTSlib.")
(define-public r-impute
(package
(name "r-impute")
(version "1.72.1")
(version "1.72.2")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "impute" version))
(sha256
(base32
"0862mpbmznizcq5bgnp85dl9q0bip76jkga45gssdrv90wsi2192"))))
"1k697pqlkrwmfszipl9irbzmwhk1vz97j3rh0k5nj2mrj3dr71mv"))))
(native-inputs
(list gfortran))
(build-system r-build-system)
@ -5944,13 +6181,13 @@ Shiny-based display methods for Bioconductor objects.")
(define-public r-lfa
(package
(name "r-lfa")
(version "1.28.0")
(version "1.28.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "lfa" version))
(sha256
(base32 "1l3ip0bsvbz9nagzv47qjh5hf7qf8ffk4hlnkwagngiwyq84vyp1"))))
(base32 "0047wspvarbnbawrwvfjfz5y6i36l2r2k2501zjya09rjpiq101m"))))
(properties `((upstream-name . "lfa")))
(build-system r-build-system)
(propagated-inputs (list r-corpcor))
@ -6010,6 +6247,33 @@ reduction (between group analysis) and joint dimension reduction of two
datasets (coinertia analysis).")
(license license:artistic2.0)))
(define-public r-makecdfenv
(package
(name "r-makecdfenv")
(version "1.74.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "makecdfenv" version))
(sha256
(base32
"0bvj5dg6yfjnhga1z8788zmb98d8shyz8pzz0ggnml87c1p2gy25"))))
(properties `((upstream-name . "makecdfenv")))
(build-system r-build-system)
(inputs (list zlib))
(propagated-inputs
(list r-affy
r-affyio
r-biobase
r-zlibbioc))
(home-page "https://bioconductor.org/packages/makecdfenv")
(synopsis "Chip description file environment maker")
(description
"This package implements two functions. One of them reads an Affymetrix
@acronym{CDF, chip description file} and creates a hash table environment
containing the location/probe set membership mapping. The other one creates a
package that automatically loads that environment.")
(license license:gpl2+)))
(define-public r-metaneighbor
(package
(name "r-metaneighbor")
@ -7050,13 +7314,13 @@ comprehensive scDblFinder method.")
(define-public r-scmap
(package
(name "r-scmap")
(version "1.20.0")
(version "1.20.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "scmap" version))
(sha256
(base32 "14vyjvfs2n4h0xsy25xg4zdmc8dqbg5vyl3qns6f0rh4bsshqdlm"))))
(base32 "0rq185ynk874vgw4a5s2n92381dj6kxxnx2fcx2v7b2ahr3ybys7"))))
(properties `((upstream-name . "scmap")))
(build-system r-build-system)
(propagated-inputs
@ -7597,13 +7861,13 @@ dependencies between GO terms can be implemented and applied.")
(define-public r-tximport
(package
(name "r-tximport")
(version "1.26.0")
(version "1.26.1")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "tximport" version))
(sha256
(base32
"1w1m6r85a5nvcfxbkq5dmczaar8vf3vbrgrmxqkjqhlpcq58z5ng"))))
"1r67q4nb2bx9nqycyr2gnfmh4gizl0c7l510vmlcdvplv3yi73yn"))))
(build-system r-build-system)
(native-inputs
(list r-knitr))
@ -7970,14 +8234,14 @@ packages.")
(define-public r-oligo
(package
(name "r-oligo")
(version "1.62.0")
(version "1.62.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "oligo" version))
(sha256
(base32
"0l6yb58frh4c080k6h8wyipc5kiz4qi7jimnr62jg8d737rrvnk2"))))
"1rhzav57d092ip9qjsmskj3l8h4xyq8cpa2a2jl8g32fwh0dyvsz"))))
(properties `((upstream-name . "oligo")))
(build-system r-build-system)
(inputs (list zlib))
@ -8115,14 +8379,14 @@ signal in the input, that lead to spurious peaks during peak calling.")
(define-public r-diffbind
(package
(name "r-diffbind")
(version "3.8.1")
(version "3.8.3")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "DiffBind" version))
(sha256
(base32
"1wgnrd1xpl49pdxxjzzl0v9535naapwp3ayqzvrx3z4m6iai2awj"))))
"039gy9ll6ingh3y5h2hp3rhbh2imaryjxzgf8ysk87irlbpnx1qs"))))
(properties `((upstream-name . "DiffBind")))
(build-system r-build-system)
(propagated-inputs
@ -8323,6 +8587,35 @@ classification and ranking tasks. @dfn{Area under curve} (AUC), precision at
a given recall, F-score for single and multiple classes are available.")
(license license:gpl2+)))
(define-public r-pepsnmr
(package
(name "r-pepsnmr")
(version "1.16.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "PepsNMR" version))
(sha256
(base32
"02i29jinawssqlb33wvj0h9w6cfcvamlyfxdynd38jmwx23l15l5"))))
(properties `((upstream-name . "PepsNMR")))
(build-system r-build-system)
(propagated-inputs
(list r-ggplot2
r-gridextra
r-matrix
r-matrixstats
r-ptw
r-reshape2))
(native-inputs (list r-knitr))
(home-page "https://github.com/ManonMartin/PepsNMR")
(synopsis "Pre-process 1H-NMR FID signals")
(description
"This package provides R functions for common pre-processing steps that
are applied on @acronym{1H-NMR, proton nuclear magnetic resonance} data. It
also provides a function to read the @acronym{FID, free induction decay}
signals directly in the Bruker format.")
(license license:gpl2)))
;; This is a CRAN package, but it depends on a Bioconductor package.
(define-public r-codedepends
(package
@ -8804,13 +9097,13 @@ information.")
(define-public r-glmgampoi
(package
(name "r-glmgampoi")
(version "1.10.0")
(version "1.10.1")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "glmGamPoi" version))
(sha256
(base32
"12jbqigg4k2ngrk2anbrrxrwkp57bbzdz492lg8lc6w1gygp5yip"))))
"1qxzbh5i208cpghmysailachj8xpx4g4iqk8552xjpjkn54pkpbd"))))
(properties `((upstream-name . "glmGamPoi")))
(build-system r-build-system)
(propagated-inputs
@ -9331,14 +9624,14 @@ penalized least squares regression method.")
(define-public r-dnacopy
(package
(name "r-dnacopy")
(version "1.72.0")
(version "1.72.2")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "DNAcopy" version))
(sha256
(base32
"0z2hl68f5f6d2w6gbhax4531g3zbgiihj99h32sa44hp29al38ld"))))
"1f6ilfwhli7bdnr48y2ijdydvw7kjbyz701kgbsw3w7inr6x6ayr"))))
(properties `((upstream-name . "DNAcopy")))
(build-system r-build-system)
(native-inputs (list gfortran))
@ -9489,14 +9782,14 @@ coordinates.")
(define-public r-lpsymphony
(package
(name "r-lpsymphony")
(version "1.26.0")
(version "1.26.2")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "lpsymphony" version))
(sha256
(base32
"0ryl48zxscb35s1gizyspxg48dlqg1j51h9iw2flq16y7y63ppzi"))))
"167zpf7k7gn7gw2cxkqx89y322qinyzjr1naracp5axj4q2qagm3"))))
(build-system r-build-system)
(arguments
(list
@ -10378,14 +10671,14 @@ especially Illumina Infinium methylation microarrays.")
(define-public r-linnorm
(package
(name "r-linnorm")
(version "2.22.0")
(version "2.22.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "Linnorm" version))
(sha256
(base32
"0ndhvdd9gkqyayxqgj5320sgj15di7ji945lpdi3rj5lwldh7na0"))))
"16d7viyidqbsy3mbr2cpq9p291yf362a4blhvs05qxcwm3fjllij"))))
(properties `((upstream-name . "Linnorm")))
(build-system r-build-system)
(propagated-inputs
@ -10726,14 +11019,14 @@ the data set is suitable for such analysis.")
(define-public r-sigpathway
(package
(name "r-sigpathway")
(version "1.66.0")
(version "1.66.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "sigPathway" version))
(sha256
(base32
"0vb6v61ak8z3hx7d65lr1hrxk89n36j0zi3x0pp828khdyh3zvag"))))
"1ln1n4zwmjw1ils45vix93q3h19xlg4q894yhhxkphgyj0qcy00b"))))
(properties `((upstream-name . "sigPathway")))
(build-system r-build-system)
(home-page "https://www.pnas.org/cgi/doi/10.1073/pnas.0506577102")
@ -10848,14 +11141,14 @@ data.")
(define-public r-enrichplot
(package
(name "r-enrichplot")
(version "1.18.1")
(version "1.18.3")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "enrichplot" version))
(sha256
(base32
"1x84wlkqisq1x2zniy4mp02zlsp4v85kxbflalmq0pixlkagq0vr"))))
"0nzcr23m58z3h0n0frxf26z14j7ilcl4fjy7rqm7f2i1wyld70zl"))))
(build-system r-build-system)
(propagated-inputs
(list r-aplot
@ -10926,13 +11219,13 @@ profiles (GO and KEGG) of gene and gene clusters.")
(define-public r-clusterexperiment
(package
(name "r-clusterexperiment")
(version "2.18.0")
(version "2.18.1")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "clusterExperiment" version))
(sha256
(base32
"04kdiwz8qzr7cr1an1c7a684wqv9pkca0iaym5f069pdjhqvvq0a"))))
"1f3f56d88yiqyj45rhcwqb04wbxr9m4fxhbbckw1j7nykm8100ps"))))
(build-system r-build-system)
(native-inputs
(list r-knitr))
@ -11695,14 +11988,14 @@ investigation using RNA-seq data.")
(define-public r-aucell
(package
(name "r-aucell")
(version "1.20.1")
(version "1.20.2")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "AUCell" version))
(sha256
(base32
"0bq729kavqkam2s4dmfzixgznsys61j0lvj5pk3b70gxv44gmpsh"))))
"1qb13qd5xzgrpx6jlg3ll0ff5spz3y06ji31vvqzm759almg2w3s"))))
(properties `((upstream-name . "AUCell")))
(build-system r-build-system)
(propagated-inputs
@ -11711,6 +12004,7 @@ investigation using RNA-seq data.")
r-delayedarray
r-delayedmatrixstats
r-gseabase
r-matrix
r-mixtools
r-r-utils
r-shiny
@ -12531,14 +12825,14 @@ and data files used across sessions.")
(define-public r-iclusterplus
(package
(name "r-iclusterplus")
(version "1.34.0")
(version "1.34.2")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "iClusterPlus" version))
(sha256
(base32
"01bl1gmc1v1b4lh88sdazjvm8pl7383dgzxnhmzpxwz7lkcxi1h2"))))
"05y4jmbf8sxl32f3g5lw9ycxky0rw69gax3n2z0kif7xcb5qf3qv"))))
(properties `((upstream-name . "iClusterPlus")))
(build-system r-build-system)
(native-inputs (list gfortran))
@ -12971,14 +13265,14 @@ annotations.")
(define-public r-rsubread
(package
(name "r-rsubread")
(version "2.12.0")
(version "2.12.2")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "Rsubread" version))
(sha256
(base32
"0iha7xln7l3mrmka8rcmmlp74f5km9rc88k9nv6bxw0krr03089n"))))
"1gvd8vmglvzc3bixqxrm4k7yikl2as5l4x6bvvvnwsgx2i7vz7dm"))))
(properties `((upstream-name . "Rsubread")))
(build-system r-build-system)
(inputs (list zlib))
@ -13204,14 +13498,14 @@ manipulation of flow cytometry data.")
(define-public r-ggcyto
(package
(name "r-ggcyto")
(version "1.26.0")
(version "1.26.4")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "ggcyto" version))
(sha256
(base32
"0phhm54wcqihj62a0jk46whmf6wwg7wj3306wvnszy7yik4z857w"))))
"1pj1v0bhvckvwn1p826phskqz9lv71c1913cz5w0fd87dzdbpzpj"))))
(properties `((upstream-name . "ggcyto")))
(build-system r-build-system)
(propagated-inputs
@ -13427,38 +13721,30 @@ package.")
(define-public r-opencyto
(package
(name "r-opencyto")
(version "2.10.0")
(version "2.10.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "openCyto" version))
(sha256
(base32
"1pkpm98fs17zqdvyymd58sl4cib7gdi7drvdkagilrafjcrpq31m"))))
"16wsa9dhnz8gz1siyhfxvnbfg142g7fmhxiqxr7n69qpq9w8yhr0"))))
(properties `((upstream-name . "openCyto")))
(build-system r-build-system)
(propagated-inputs
(list r-biobase
(list r-bh
r-biobase
r-biocgenerics
r-clue
r-cpp11
r-data-table
r-flowclust
r-flowcore
r-flowstats
r-flowviz
r-flowworkspace
r-graph
r-gtools
r-ks
r-lattice
r-mass
r-ncdfflow
r-plyr
r-r-utils
r-rbgl
r-rcolorbrewer
r-rcpp
r-rrcov))
r-rcolorbrewer))
(native-inputs
(list r-knitr))
(home-page "https://bioconductor.org/packages/openCyto")
@ -13658,14 +13944,14 @@ data, to only emphasize the data that actually matters.")
(define-public r-rcistarget
(package
(name "r-rcistarget")
(version "1.17.0")
(version "1.18.2")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "RcisTarget" version))
(sha256
(base32
"1anwin5476q2n0zgywrmp3nj6sgy07i6pw1lczydvn4h1a8n1rvk"))))
"02lz2m2zhwy1dvmjvlss6qg0dh574qhnvn7al3wx7ck1hkz0dgi2"))))
(properties `((upstream-name . "RcisTarget")))
(build-system r-build-system)
(propagated-inputs
@ -15328,13 +15614,13 @@ functionality.")
(define-public r-biocviews
(package
(name "r-biocviews")
(version "1.66.0")
(version "1.66.1")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "biocViews" version))
(sha256
(base32
"1rgn0agw5m4y8838lxzq1r658h1pblaidmm444yfimjffa8znj23"))))
"1xplkzm29v6aysfhb6kf2nnmvc37jmcvv6vsgbx8z8qccn96jk02"))))
(properties
`((upstream-name . "biocViews")))
(build-system r-build-system)
@ -15346,6 +15632,7 @@ functionality.")
r-rcurl
r-xml
r-runit))
(native-inputs (list r-knitr))
(home-page "https://bioconductor.org/packages/biocViews")
(synopsis "Bioconductor package categorization helper")
(description "The purpose of biocViews is to create HTML pages that
@ -15914,14 +16201,14 @@ generated.")
(define-public r-preprocesscore
(package
(name "r-preprocesscore")
(version "1.60.0")
(version "1.60.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "preprocessCore" version))
(sha256
(base32
"1l0m591scln024jdpib47fndhx2wfp9jgkj3mdmwd9nkc5y0qjda"))))
"1rwr31jp4dh3xcfx1kx8rz5xvyx1mrwy85hqrjrfr4m6h0qv28k1"))))
(properties
`((upstream-name . "preprocessCore")))
(build-system r-build-system)
@ -15935,13 +16222,13 @@ routines.")
(define-public r-s4vectors
(package
(name "r-s4vectors")
(version "0.36.0")
(version "0.36.1")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "S4Vectors" version))
(sha256
(base32
"05al4diwdbsa9b37i8msxnp79fxk7k24dk2vhh131s3snb89jvfs"))))
"16lssnmhy3klqp4sw1328f38cixkjh9317gdyikcrmsbcwg2ak6v"))))
(properties
`((upstream-name . "S4Vectors")))
(build-system r-build-system)
@ -16425,13 +16712,13 @@ This package wraps C++ code from the MOODS motif calling library.")
(define-public r-chromvar
(package
(name "r-chromvar")
(version "1.20.0")
(version "1.20.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "chromVAR" version))
(sha256
(base32 "1rwgbicbmszdkr05ksxfsisyhk0a4pvc3jrxbzjyc13jj5h6m5kp"))))
(base32 "1nhhpqhpvmw6b0nwxdwsjnakmfpxzpii8fmabwwg9bk8ni3zj5dq"))))
(properties `((upstream-name . "chromVAR")))
(build-system r-build-system)
(propagated-inputs
@ -16532,14 +16819,14 @@ cell types to infer the cell of origin of each single cell independently.")
(define-public r-scuttle
(package
(name "r-scuttle")
(version "1.8.1")
(version "1.8.3")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "scuttle" version))
(sha256
(base32
"10wk46zgi57m9q9ab6wlmljcss3fph2r9yp1bp01s9yv7sd749b2"))))
"1wgh28rj8m5dz89s9y4rzfy68d8ign6pcnnwj9g7h4sc3jfsg56i"))))
(properties `((upstream-name . "scuttle")))
(build-system r-build-system)
(propagated-inputs
@ -16612,14 +16899,14 @@ quality control.")
(define-public r-scran
(package
(name "r-scran")
(version "1.26.0")
(version "1.26.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "scran" version))
(sha256
(base32
"11iwpw44600pfx01vqil97k728m1wf4dljr27k2ak4s7z75kxfih"))))
"1sqc8pf1qzm24kf1l45da12wbzv0nxsy6l3v9fc8srmnvk37p04p"))))
(build-system r-build-system)
(propagated-inputs
(list r-beachmat
@ -17214,13 +17501,13 @@ EMBL-EBI GWAS catalog.")
(define-public r-kegggraph
(package
(name "r-kegggraph")
(version "1.58.0")
(version "1.58.3")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "KEGGgraph" version))
(sha256
(base32 "0hpsb009qmhy9p67d5wd0cl60smhgjlhxsz5f52i1c6qy4jk1niq"))))
(base32 "1s5j7zdp8ck4vhca81i4b6qclhwi56gmz8brawrxj3szvwmxf3y6"))))
(properties `((upstream-name . "KEGGgraph")))
(build-system r-build-system)
(propagated-inputs

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@ -3,7 +3,7 @@
;;; Copyright © 2015, 2018 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2015 Leo Famulari <leo@famulari.name>
;;; Copyright © 2016, 2020 Jan (janneke) Nieuwenhuizen <janneke@gnu.org>
;;; Copyright © 2016, 2017, 2018, 2021 Marius Bakke <marius@gnu.org>
;;; Copyright © 2016-2018, 2021-2022 Marius Bakke <marius@gnu.org>
;;; Copyright © 2016, 2017 Danny Milosavljevic <dannym@scratchpost.org>
;;; Copyright © 2016, 2017 David Craven <david@craven.ch>
;;; Copyright © 2017, 2018, 2020, 2021, 2022 Efraim Flashner <efraim@flashner.co.il>
@ -537,12 +537,13 @@ The SUBDIR argument defaults to \"efi/Guix\", as it is also the case for
(lambda _
(invoke "chmod" "a+w" "utils/isohybrid.in")))
(replace 'check
(lambda _
(setenv "CC" "gcc")
(substitute* "tests/unittest/include/unittest/unittest.h"
;; Don't look up headers under /usr.
(("/usr/include/") ""))
(invoke "make" "unittest"))))))
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(setenv "CC" "gcc")
(substitute* "tests/unittest/include/unittest/unittest.h"
;; Don't look up headers under /usr.
(("/usr/include/") ""))
(invoke "make" "unittest")))))))
(home-page "https://www.syslinux.org")
(synopsis "Lightweight Linux bootloader")
(description "Syslinux is a lightweight Linux bootloader.")
@ -655,6 +656,7 @@ tree binary files. These are board description files used by Linux and BSD.")
lz4
ncurses/tinfo
perl
pkg-config ;for 'make menuconfig'
python
python-coverage
python-pycryptodomex
@ -728,8 +730,7 @@ def test_ctrl_c"))
;; This test requires a sound system, which is un-used
;; in u-boot-tools.
(("CONFIG_SOUND=y") "CONFIG_SOUND=n")))
(find-files "configs" "sandbox_.*defconfig$|tools-only_defconfig"))
#t))
(find-files "configs" "sandbox_.*defconfig$|tools-only_defconfig"))))
(replace 'configure
(lambda* (#:key make-flags #:allow-other-keys)
(apply invoke "make" "tools-only_defconfig" make-flags)))
@ -754,8 +755,7 @@ def test_ctrl_c"))
"tools/proftool"
"tools/fdtgrep"
"tools/env/fw_printenv"
"tools/sunxi-spl-image-builder"))
#t)))
"tools/sunxi-spl-image-builder")))))
(delete 'check)
(add-after 'install 'check
(lambda* (#:key make-flags test-target #:allow-other-keys)
@ -817,6 +817,7 @@ appended to the package description."
#:test-target "test"
#:make-flags
(list "HOSTCC=gcc"
"KBUILD_VERBOSE=1"
,@(if (not (same-arch?))
`((string-append "CROSS_COMPILE=" ,triplet "-"))
'()))
@ -889,7 +890,7 @@ appended to the package description."
(define-public u-boot-malta
(make-u-boot-package "malta" "mips64el-linux-gnuabi64"))
(define-public u-boot-am335x-boneblack
(define-public u-boot-am335x-evm-boneblack
(make-u-boot-package
"am335x_evm" "arm-linux-gnueabihf"
;; Patch out other device trees to build an image small enough to fit
@ -1419,7 +1420,7 @@ order to add a suitable bootloader menu entry.")
;;
;; TODO: Bump this timestamp at each modifications of the package (not only
;; for updates) by running: date +%s.
(let ((timestamp "1591706427"))
(let ((timestamp "1671715380"))
(package
(name "ipxe")
(version "1.21.1")
@ -1481,6 +1482,14 @@ order to add a suitable bootloader menu entry.")
(modify-phases %standard-phases
(add-after 'unpack 'enter-source-directory
(lambda _ (chdir "src") #t))
(add-after 'enter-source-directory 'set-version
(lambda _
;; When not building from a git checkout, iPXE encodes the
;; version as "1.0.0+". Use the package version instead.
(substitute* "Makefile"
(("^VERSION[[:blank:]]+=.*")
(string-append "VERSION = " ,(package-version this-package)
"-guix\n")))))
(add-after 'enter-source-directory 'set-options
(lambda _
(substitute* "config/general.h"
@ -1531,3 +1540,85 @@ existing PXE ROM on your network card, or you can chainload into iPXE to obtain
the features of iPXE without the hassle of reflashing.")
(license license:gpl2+))))
(define-public ipxe-qemu
(package/inherit ipxe
(name "ipxe-qemu")
(native-inputs
;; QEMU uses a 64-bit UEFI firmware.
(if (target-x86-64?)
(modify-inputs (package-native-inputs ipxe)
(prepend edk2-tools))
(if (target-64bit?)
(modify-inputs (package-native-inputs ipxe)
(prepend edk2-tools
(cross-gcc "x86_64-linux-gnu")
(cross-binutils "x86_64-linux-gnu")))
;; Our default 32-bit binutils is not 64-bit capable.
(let ((binutils-64-bit-bfd
(package/inherit
binutils
(name "binutils-64-bit-bfd")
(arguments
(substitute-keyword-arguments (package-arguments binutils)
((#:configure-flags flags ''())
`(cons "--enable-64-bit-bfd" ,flags)))))))
(modify-inputs (package-native-inputs ipxe)
(prepend edk2-tools
(make-ld-wrapper "ld-wrapper-64-bit-bfd"
#:binutils binutils)
binutils-64-bit-bfd
(cross-gcc "x86_64-linux-gnu")
(cross-binutils "x86_64-linux-gnu")))))))
(arguments
(let ((roms
;; Alist of ROM -> (VID . DID) entries. This list and below
;; build steps are taken from QEMUs roms/Makefile.
'(("e1000" . ("8086" . "100e"))
("e1000e" . ("8086" . "10d3"))
("eepro100" . ("8086" . "1209"))
("ne2k_pci" . ("1050" . "0940"))
("pcnet" . ("1022" . "2000"))
("rtl8139" . ("10ec" . "8139"))
("virtio" . ("1af4" . "1000"))
("vmxnet3" . ("15ad" . "07b0")))))
(substitute-keyword-arguments (package-arguments ipxe)
((#:modules modules)
`((ice-9 match) ,@modules))
((#:make-flags flags)
#~(append (delete "everything" #$flags)
'("CONFIG=qemu"
#$@(if (target-x86-64?)
'()
'("CROSS_COMPILE=x86_64-linux-gnu-")))
(map (match-lambda
((_ . (vid . did))
(string-append "bin/" vid did ".rom")))
'#$roms)
(map (match-lambda
((_ . (vid . did))
(string-append "bin-x86_64-efi/"
vid did ".efidrv")))
'#$roms)))
((#:phases phases)
#~(modify-phases #$phases
(replace 'install
(lambda _
(let ((firmware (string-append #$output "/share/qemu")))
(mkdir-p firmware)
(for-each
(match-lambda
((name . (vid . did))
(let ((rom (string-append "bin/" vid did ".rom")))
(copy-file rom
(string-append firmware
"/pxe-" name ".rom"))
(invoke "EfiRom"
"-b" rom
"-l" "0x02"
"-f" (string-append "0x" vid)
"-i" (string-append "0x" did)
"-ec" (string-append "bin-x86_64-efi/"
vid did ".efidrv")
"-o" (string-append firmware
"/efi-" name ".rom")))))
'#$roms)))))))))))

8
gnu/packages/c.scm
View file

@ -425,14 +425,14 @@ whose behaviour is inconsistent across *NIX flavours.")
(define-public libhx
(package
(name "libhx")
(version "4.3")
(version "4.8")
(source
(origin
(method url-fetch)
(uri (string-append "https://inai.de/files/libhx/"
"libHX-" version ".tar.xz"))
(sha256
(base32 "06zkzaya6j3vaafz80qcgn5qcri047003bhmjisv5sbikcw97jqy"))))
(base32 "1mj6n4p0fs1jzj1dvk2xkyiyc1s7s5fxv27iciwn0xkwhasjmhxa"))))
(build-system gnu-build-system)
(home-page "https://inai.de/projects/libhx/")
(synopsis "C library with common data structures and functions")
@ -760,7 +760,7 @@ portability.")
(define-public byacc
(package
(name "byacc")
(version "20220128")
(version "20221106")
(source (origin
(method url-fetch)
(uri (string-append
@ -768,7 +768,7 @@ portability.")
version ".tgz"))
(sha256
(base32
"173l5pdzgqk2ld6lf0ablii0iiw07sry2vrjfrm4wc99qmf81ha2"))))
"04lxggjarbidfq8ba5q6kwgqys4lhidbnz8gf3vrrb5wgcibx6d8"))))
(build-system gnu-build-system)
(home-page "https://invisible-island.net/byacc/byacc.html")
(synopsis "Berkeley Yacc LALR parser generator")

4
gnu/packages/ccache.scm
View file

@ -35,14 +35,14 @@
(define-public ccache
(package
(name "ccache")
(version "4.7.2")
(version "4.7.4")
(source
(origin
(method url-fetch)
(uri (string-append "https://github.com/ccache/ccache/releases/download/v"
version "/ccache-" version ".tar.xz"))
(sha256
(base32 "1bsf27dii1bm6bamvs6gi6vm5pjrd0956vf8597ix76lfyjpbjhp"))))
(base32 "0djfm138m863g772bnq7m2mfwh3y8sqxczc3yssg1yiybp8n836z"))))
(build-system cmake-build-system)
(arguments
(list #:configure-flags

87
gnu/packages/check.scm
View file

@ -580,6 +580,85 @@ It allows the specification of behaviour scenarios using a given-when-then
pattern.")
(license license:apsl2))))
(define-public catch2-3.1
(package
(name "catch2")
(version "3.1.1")
(home-page "https://github.com/catchorg/Catch2")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/catchorg/Catch2")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1qnr5b3zq8brh43f924rgnw5gmmjf9ax7kbq2crz1mlwgmdymxlp"))))
(outputs (list "out" "static"))
(build-system meson-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'patch-meson
(lambda _
(substitute* "src/catch2/meson.build"
(("static_library") "both_libraries"))))
(add-after 'install 'install-cmake-config
(lambda* (#:key outputs #:allow-other-keys)
(define prefix (string-append (assoc-ref outputs "out")
"/lib/cmake/Catch2/"))
(mkdir-p prefix)
(call-with-output-file (string-append
prefix
"catch2-config-version.cmake")
(lambda (port)
(format
port
"set(PACKAGE_VERSION ~s)~@
if(PACKAGE_FIND_VERSION STREQUAL PACKAGE_VERSION)~@
set(PACKAGE_VERSION_EXACT TRUE)~@
set(PACKAGE_VERSION_COMPATIBLE TRUE)~@
elseif(PACKAGE_FIND_VERSION VERSION_LESS_EQUAL ~
PACKAGE_VERSION)~@
set(PACKAGE_VERSION_COMPATIBLE TRUE)~@
else()~@
set(PACKAGE_VERSION_COMPATIBLE FALSE)~@
endif()"
#$version)))
(call-with-output-file (string-append prefix
"catch2-config.cmake")
(lambda (port)
(format
port
"include(FindPkgConfig)~@
pkg_check_modules(CATCH2 IMPORTED_TARGET GLOBAL catch2)~@
pkg_check_modules(CATCH2MAIN ~
IMPORTED_TARGET GLOBAL ~
catch2 catch2-with-main)~@
if(CATCH2_FOUND)~@
add_library(Catch2::Catch2 ALIAS PkgConfig::CATCH2)~@
endif()~@
if(CATCH2MAIN_FOUND)~@
add_library(Catch2::Catch2WithMain ~
ALIAS PkgConfig::CATCH2MAIN)~@
endif()")))))
(add-after 'install 'move-static-libraries
(lambda* (#:key outputs #:allow-other-keys)
(let ((out (assoc-ref outputs "out"))
(static (assoc-ref outputs "static")))
(for-each
(lambda (file)
(install-file file (string-append static "/lib"))
(delete-file file))
(find-files (string-append out "/lib")
"\\.a$"))))))))
(inputs (list python-wrapper))
(synopsis "Automated test framework for C++ and Objective-C")
(description "Catch2 stands for C++ Automated Test Cases in Headers and is
a multi-paradigm automated test framework for C++ and Objective-C.")
(license license:boost1.0)))
(define-public cmdtest
(package
(name "cmdtest")
@ -750,7 +829,7 @@ and it supports a very flexible form of test discovery.")
(define-public doctest
(package
(name "doctest")
(version "2.4.8")
(version "2.4.9")
(home-page "https://github.com/onqtam/doctest")
(source (origin
(method git-fetch)
@ -759,7 +838,7 @@ and it supports a very flexible form of test discovery.")
(file-name (git-file-name name version))
(sha256
(base32
"057wdkv3gcz42mh1j284sgvm16i5fk1f9b1plgvavca70q4p52gz"))))
"1pkpwwvskcr21p00zrbnxpddv34p605mls86qirqqdwggmws82ds"))))
(build-system cmake-build-system)
(synopsis "C++ test framework")
(description
@ -3235,7 +3314,7 @@ system. The code under test requires no modification to work with pyfakefs.")
(define-public python-aiounittest
(package
(name "python-aiounittest")
(version "1.4.1")
(version "1.4.2")
;; Pypi package lacks tests.
(source
(origin (method git-fetch)
@ -3245,7 +3324,7 @@ system. The code under test requires no modification to work with pyfakefs.")
(file-name (git-file-name name version))
(sha256
(base32
"10x7ds09b9415r92f7g9714gxixvvq3bm5mnh29ml9aba8blcb0n"))))
"0srahyzrk5awfh4rmppvqkblfmiavdklxl9i5mcr8gl7ahiwwl7f"))))
(build-system python-build-system)
(arguments
'(#:phases (modify-phases %standard-phases

8
gnu/packages/chromium.scm
View file

@ -317,7 +317,7 @@
;; run the Blink performance tests, just remove everything to save ~70MiB.
'("third_party/blink/perf_tests"))
(define %chromium-version "108.0.5359.98")
(define %chromium-version "108.0.5359.124")
(define %ungoogled-revision (string-append %chromium-version "-1"))
(define %debian-revision "debian/102.0.5005.61-1")
(define %arch-revision "4de5019014aeb77187a517c5ca6db8723d622a40")
@ -330,7 +330,7 @@
(file-name (git-file-name "ungoogled-chromium" %ungoogled-revision))
(sha256
(base32
"16rc15qsndrsj52p56ma3hg94jslkfy2f91ryr3qss73r2rkjf8j"))))
"18sz2ksawyb08h4kbxzkf1zhxs832z8mwvndm43nykz01wxk20bp"))))
(define %debian-origin
(origin
@ -491,7 +491,7 @@
%chromium-version ".tar.xz"))
(sha256
(base32
"07jnhd5y7k4zp2ipz052isw7llagxn8l8rbz8x3jkjz3f5wi7dk0"))
"0x9ac6m4xdccjdrk2bmq4y7bhfpgf2dv0q7lsbbsa50vlv1gm3fl"))
(modules '((guix build utils)))
(snippet (force ungoogled-chromium-snippet))))
(build-system gnu-build-system)
@ -899,7 +899,7 @@
dbus
expat
flac
ffmpeg
ffmpeg-4
fontconfig
fp16
freetype

4
gnu/packages/code.scm
View file

@ -143,14 +143,14 @@ highlighting your own code that seemed comprehensible when you wrote it.")
(define-public global ; a global variable
(package
(name "global")
(version "6.6.8")
(version "6.6.9")
(source (origin
(method url-fetch)
(uri (string-append "mirror://gnu/global/global-"
version ".tar.gz"))
(sha256
(base32
"1kaphc3gml89p8dpdgh2is8hj46wj05689kxj0bmh5q759rxk4vg"))))
"1mgss7ch4izz7ibb23xah6h4iva77g9dq4pkc9g69jk0ipxa1jxa"))))
(build-system gnu-build-system)
(arguments
(list #:configure-flags

17
gnu/packages/compression.scm
View file

@ -2695,7 +2695,7 @@ to their original, binary CD format.")
(define-public libdeflate
(package
(name "libdeflate")
(version "1.14")
(version "1.15")
(source (origin
(method git-fetch)
(uri (git-reference
@ -2704,19 +2704,16 @@ to their original, binary CD format.")
(file-name (git-file-name name version))
(sha256
(base32
"09y69mnbv3mprgjp53zvin5zqznqajginrk5b25xmi9y0b83bns8"))))
(build-system gnu-build-system)
"001l1xdc3k1dfjvl3ng480ydz0rnyvlhv54l5mshg2p9v4iz3v09"))))
(build-system cmake-build-system)
(arguments
(list #:make-flags
#~(list (string-append "CC=" #$(cc-for-target))
(string-append "PREFIX=" #$output))
(list #:configure-flags
#~(list "-DLIBDEFLATE_BUILD_STATIC_LIB=NO")
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'skip-static-library-installation
(replace 'check
(lambda _
(substitute* "Makefile"
(("install .*\\$\\(STATIC_LIB\\).*") ""))))
(delete 'configure)))) ; no configure script
(invoke "../source/scripts/run_tests.sh"))))))
(inputs
(list zlib))
(home-page "https://github.com/ebiggers/libdeflate")

2
gnu/packages/containers.scm
View file

@ -91,7 +91,7 @@
(inputs
(list libcap
libseccomp
libyajl))
yajl))
(native-inputs
(list automake
autoconf

4
gnu/packages/cpp.scm
View file

@ -1901,7 +1901,7 @@ multi-threaded applications and network applications.")
(define-public gulrak-filesystem
(package
(name "gulrak-filesystem")
(version "1.5.10")
(version "1.5.12")
(source (origin
(method git-fetch)
(uri (git-reference
@ -1910,7 +1910,7 @@ multi-threaded applications and network applications.")
(file-name (git-file-name name version))
(sha256
(base32
"0dx1yvbz5rnisymkqap7z0b06ag9fcs6q6l82vgi8caylhkwsqs7"))))
"1qg10akvhp801xirkj4mqcpvcxj90z81ygpyg752xv110zj4914g"))))
(build-system cmake-build-system)
(synopsis "Header only C++ std::filesystem compatible library")
(description "This package provides a header-only single-file

833
gnu/packages/cran.scm
View file

File diff suppressed because it is too large Load diff

24
gnu/packages/crates-io.scm
View file

@ -30,6 +30,7 @@
;;; Copyright © 2022 Gabriel Arazas <foo.dogsquared@gmail.com>
;;; Copyright © 2022 ( <paren@disroot.org>
;;; Copyright © 2022 Greg Hogan <code@greghogan.com>
;;; Copyright © 2022 Paul A. Patience <paul@apatience.com>
;;;
;;; This file is part of GNU Guix.
;;;
@ -14746,6 +14747,29 @@ processors.")
"Bare bones CSV parsing with no_std support.")
(license (list license:unlicense license:expat))))
(define-public rust-csv-index-0.1
(package
(name "rust-csv-index")
(version "0.1.6")
(source
(origin
(method url-fetch)
(uri (crate-uri "csv-index" version))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32 "01048y84y0bakqm0x4y1svjv6lzc753b9q598xp7xgcqrdgi6x7j"))))
(build-system cargo-build-system)
(arguments
`(#:cargo-inputs
(("rust-byteorder" ,rust-byteorder-1)
("rust-csv" ,rust-csv-1))))
(home-page "https://github.com/BurntSushi/rust-csv")
(synopsis "On-disk CSV indexing data structures")
(description
"A collection of data structures for indexing CSV data, with a focus on
data structures that can be easily serialized to and deserialized from disk.")
(license (list license:unlicense license:expat))))
(define-public rust-cstr-core-0.2
(package
(name "rust-cstr-core")

26
gnu/packages/crypto.scm
View file

@ -953,14 +953,14 @@ SHA256, SHA512, SHA3, AICH, ED2K, Tiger, DC++ TTH, BitTorrent BTIH, GOST R
(define-public botan
(package
(name "botan")
(version "2.19.2")
(version "2.19.3")
(source (origin
(method url-fetch)
(uri (string-append "https://botan.randombit.net/releases/"
"Botan-" version ".tar.xz"))
(sha256
(base32
"0xad3fa96l6x3azxs2gbz5jfqm2drfv9y9idhf5wvdf62mvg3x9s"))))
"0m9dh00zibx13pbjij8lbncf86pix3cxklxmgl47z965k7rlgq6s"))))
(build-system gnu-build-system)
(arguments
(list
@ -1293,10 +1293,10 @@ signatures include trusted comments in addition to untrusted comments.
Trusted comments are signed, thus verified, before being displayed.")
(license license:isc)))
(define-public libolm
(define-public olm
(package
(name "libolm")
(version "3.2.12")
(name "olm")
(version "3.2.14")
(source (origin
(method git-fetch)
(uri (git-reference
@ -1304,7 +1304,7 @@ Trusted comments are signed, thus verified, before being displayed.")
(commit version)))
(sha256
(base32
"1k8v9ig32vmjm58rbris621d7mvp4q91qa5p79vc51p41sz91yhj"))
"0pj7gs32ixhlls792wah7xf49j5pra0avp7dpvy9cndkdkg6biq5"))
(file-name (git-file-name name version))
;; Delete the bundled blob. It's free, but unauditable,
;; and apparently only required for android.
@ -1319,13 +1319,16 @@ Trusted comments are signed, thus verified, before being displayed.")
(when tests?
(with-directory-excursion "tests"
(invoke "ctest" "."))))))))
(synopsis "Implementation of the olm and megolm cryptographic ratchets")
(description "The libolm library implements the Double Ratchet
(synopsis "Implementation of the Olm and Megolm cryptographic ratchets")
(description "The Olm library implements the Double Ratchet
cryptographic ratchet. It is written in C and C++11, and exposed as a C
API.")
(home-page "https://matrix.org/docs/projects/other/olm/")
(license license:asl2.0)))
(define-public libolm
(deprecated-package "libolm" olm))
(define-public python-olm
(package
;; python-olm is part of libolm and must be updated at the same time.
@ -1351,10 +1354,9 @@ API.")
(list python-cffi python-future))
(native-inputs
(list python-pytest python-pytest-benchmark python-aspectlib))
(synopsis "Python bindings for libolm")
(description "The libolm library implements the Double Ratchet
cryptographic ratchet. It is written in C and C++11, and exposed as a C
API. This package contains its Python bindings.")))
(synopsis "Python bindings for Olm")
(description "The Olm library implements the Double Ratchet
cryptographic ratchet. This package contains its Python bindings.")))
(define-public hash-extender
(let ((commit "cb8aaee49f93e9c0d2f03eb3cafb429c9eed723d")

211
gnu/packages/databases.scm
View file

@ -174,6 +174,7 @@
#:use-module (guix build-system go)
#:use-module (guix build-system meson)
#:use-module (guix build-system perl)
#:use-module (guix build-system pyproject)
#:use-module (guix build-system python)
#:use-module (guix build-system qt)
#:use-module (guix build-system ruby)
@ -487,14 +488,14 @@ mapping from string keys to string values.")
(define-public memcached
(package
(name "memcached")
(version "1.6.16")
(version "1.6.17")
(source
(origin
(method url-fetch)
(uri (string-append
"https://memcached.org/files/memcached-" version ".tar.gz"))
(sha256
(base32 "1nilmfhy8hc7zzlihnx3hmiqf7siyrpgz2g5s3r3l36xy4xsjl9h"))))
(base32 "090jpprdjhbr1v9ph15s077bj8ryrsnz1ydg54aw53rxc5ry6m90"))))
(build-system gnu-build-system)
(inputs
(list libevent cyrus-sasl))
@ -577,13 +578,13 @@ the API, and provides features such as:
(define-public python-pylibmc
(package
(name "python-pylibmc")
(version "1.6.1")
(version "1.6.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pylibmc" version))
(sha256
(base32 "1sg7d9j0v6g3xg3finf4l1hb72c13vcyyi6rqrc9shbx903d93ca"))))
(base32 "1q06696lxpqn155sydg3z6dksimks6n35q72zdjsvarpal8ldypf"))))
(build-system python-build-system)
(arguments
'(#:phases
@ -593,7 +594,7 @@ the API, and provides features such as:
(lambda _
(invoke "memcached" "-d"))))))
(native-inputs
(list memcached python-nose))
(list memcached python-pytest))
(inputs
(list libmemcached zlib cyrus-sasl))
(home-page "http://sendapatch.se/projects/pylibmc/")
@ -1572,14 +1573,14 @@ types are supported, as is encryption.")
(define-public emacs-rec-mode
(package
(name "emacs-rec-mode")
(version "1.9.0")
(version "1.9.1")
(source (origin
(method url-fetch)
(uri (string-append "https://elpa.gnu.org/packages/"
"rec-mode-" version ".tar"))
(sha256
(base32
"1w1q6kh567fd8xismq9i6wr1y893lypd30l452yvydi1qjiq1n6x"))
"0f60bw07l6kk1kkjjxsk30p6rxj9mpngaxqy8piyabnijfgjzd3s"))
(snippet #~(begin (delete-file "rec-mode.info")))))
(build-system emacs-build-system)
(arguments
@ -2795,7 +2796,7 @@ semantics.")
(define-public libpqxx
(package
(name "libpqxx")
(version "7.7.3")
(version "7.7.4")
(source (origin
(method git-fetch)
(uri (git-reference
@ -2804,7 +2805,7 @@ semantics.")
(file-name (git-file-name name version))
(sha256
(base32
"1mrhsih5bhiin0l3c4vp22l9p7c5035m0vvqpx18c0407fkzc7hp"))))
"1qwpfba8g55jjv0xnsk4hhf2cmhk7mdirxx115cvnjjw97ppy0z0"))))
(build-system gnu-build-system)
(native-inputs (list gcc-11 python-wrapper))
(inputs (list postgresql))
@ -2937,13 +2938,13 @@ with Python's asyncio framework.")
(define-public python-asyncmy
(package
(name "python-asyncmy")
(version "0.2.3")
(version "0.2.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "asyncmy" version))
(sha256
(base32 "19p81jd4w7m7v2x1jdrwibp67wzqx1a7rdw5n4qqmch3iffp97vn"))))
(base32 "0i18zxy6xvzv6dk791xifn2sw2q4zvqwpzrzy8qx51d3mp8z6gng"))))
(build-system python-build-system)
(native-inputs (list python-cython))
(home-page "https://github.com/long2ice/asyncmy")
@ -3089,13 +3090,13 @@ or languages. It uses only Python's built-in data types.")
(define-public python-pyodbc
(package
(name "python-pyodbc")
(version "4.0.32")
(version "4.0.35")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pyodbc" version))
(sha256
(base32 "0sqs0x2l5mk3yv0wwz3ya8yh5f4babihyhc8hjbf2m86b71z1rcv"))
(base32 "1j7577acd2f16zifw49ajg0aw7vm0pdg6jxrr1dlaa5rx14azfcj"))
(modules '((guix build utils)))
(snippet
;; Delete precompiled binaries. The corresponding source is included.
@ -3403,14 +3404,13 @@ framework.")
(define-public python-sqlalchemy-utils
(package
(name "python-sqlalchemy-utils")
(version "0.38.2")
(version "0.38.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "SQLAlchemy-Utils" version))
(sha256
(base32
"1d6fq81489kqzxmk3l6f39sinw206lzs392frmpr5lsjzg9xc0cy"))))
(base32 "0k8z0mjhvdv302kn0nhci8b2dgw4cn2akprsf37ma1540ykgp6lz"))))
(build-system python-build-system)
(arguments
'(#:tests? #f)) ; FIXME: Many tests require a running database server.
@ -3542,7 +3542,7 @@ PickleShare.")
(define-public python-apsw
(package
(name "python-apsw")
(version "3.39.2.1")
(version "3.40.0.0")
;; The compressed release has fetching functionality disabled.
(source
(origin
@ -3552,24 +3552,23 @@ PickleShare.")
version "/apsw-" version ".zip"))
(sha256
(base32
"06x3qgg71xz8l3kz8gz04wkfp5f6zfrg476a4mm1c5hikqyw6ykj"))
;; Cherry-picked from upstream, remove when bumping to 3.39.3.
(patches
(search-patches "python-apsw-3.39.2.1-test-fix.patch"))))
(build-system python-build-system)
(native-inputs (list unzip))
(inputs (list sqlite-next)) ;SQLite 3.39 required.
"02sgja00azvd08wi2wm105apmhp2644s7aw9b1zdg3dkcwjnsiad"))))
(build-system pyproject-build-system)
(native-inputs
(list python-cython unzip))
(inputs (list sqlite-next)) ;SQLite 3.40 required.
(arguments
(list #:phases
#~(modify-phases %standard-phases
(replace 'build
(lambda _
(invoke "python" "setup.py" "build" "--enable-all-extensions"
"--enable=load_extension")))
(add-after 'build 'build-test-helper
(lambda _
(invoke "gcc" "-fPIC" "-shared" "-o" "./testextension.sqlext"
"-I." "-Isqlite3" "src/testextension.c"))))))
(list
#:phases
#~(modify-phases %standard-phases
(add-before 'build 'build-extensions
(lambda _
(invoke "python" "setup.py" "build" "--enable-all-extensions"
"--enable=load_extension")))
(add-after 'build 'build-test-helper
(lambda _
(invoke "gcc" "-fPIC" "-shared" "-o" "./testextension.sqlext"
"-I." "-Isqlite3" "src/testextension.c"))))))
(home-page "https://github.com/rogerbinns/apsw/")
(synopsis "Another Python SQLite Wrapper")
(description
@ -3638,13 +3637,13 @@ managers for automatically closing connections.")
(define-public python-psycopg2
(package
(name "python-psycopg2")
(version "2.9.3")
(version "2.9.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "psycopg2" version))
(sha256
(base32 "1099as8ind9kpz30rmqzc3nir668fmpkxwayrj2sjka3ycdiv14f"))))
(base32 "0ni4kq6p7hbkm2qsky998q36q5gq5if4nwd8hwhjx5rsd0p6s955"))))
(build-system python-build-system)
(arguments
;; Tests would require a postgresql database "psycopg2_test"
@ -3960,7 +3959,7 @@ reasonable substitute.")
(define-public python-rq
(package
(name "python-rq")
(version "1.11")
(version "1.11.1")
(source
(origin
(method git-fetch)
@ -3969,7 +3968,7 @@ reasonable substitute.")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1dj3m8dh9vf1qiq1drjhfw5xbr975v1kpzn4fwja83cfd7jrpzvy"))))
(base32 "0dnjm2s036l4j4ypq0h903vh132dp2wiwjrn8jicz1nw829dqpzf"))))
(build-system python-build-system)
(arguments
'(#:phases (modify-phases %standard-phases
@ -4057,13 +4056,13 @@ is designed to have a low barrier to entry.")
(define-public python-sqlparse
(package
(name "python-sqlparse")
(version "0.4.2")
(version "0.4.3")
(source (origin
(method url-fetch)
(uri (pypi-uri "sqlparse" version))
(sha256
(base32
"1bkx52c2jh28c528b69qfk2ijfzw1laxx6lim7jr8fi6fh67600c"))))
"0s3jyllg0ka0n7pgqfng1hzvh39li853dr40qcp4s4dv8r481jk9"))))
(build-system python-build-system)
(arguments
`(#:phases
@ -4263,6 +4262,138 @@ language-bindings for structure manipulation. It also provides IPC and common
algorithm implementations.")
(license license:asl2.0)))
(define-public apache-arrow-for-ceph
(package
(name "apache-arrow")
(version "6.0.1")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/apache/arrow")
(commit (string-append "apache-arrow-" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0mcw361akqw4sxnnpnr9c9v1zk4hphk6gcq763pcb19yzljh88ig"))))
(build-system cmake-build-system)
(arguments
`(#:tests? #f
#:phases
(modify-phases %standard-phases
(add-before 'configure 'enter-source-directory
(lambda _ (chdir "cpp")))
(add-after 'unpack 'set-env
(lambda* (#:key inputs #:allow-other-keys)
(substitute* "cpp/src/parquet/parquet.pc.in"
(("includedir=\\$\\{prefix\\}/")
"includedir="))
(substitute* "cpp/cmake_modules/ThirdpartyToolchain.cmake"
(("set\\(xsimd_SOURCE.*") ""))
(setenv "BOOST_ROOT" (assoc-ref inputs "boost"))
(setenv "BROTLI_HOME" (assoc-ref inputs "brotli"))
(setenv "FLATBUFFERS_HOME" (assoc-ref inputs "flatbuffers"))
(setenv "RAPIDJSON_HOME" (assoc-ref inputs "rapidjson")))))
#:build-type "Release"
#:configure-flags
(list "-DARROW_PYTHON=ON"
"-DARROW_GLOG=ON"
;; Parquet options
"-DARROW_PARQUET=ON"
"-DPARQUET_BUILD_EXECUTABLES=ON"
;; The maintainers disallow using system versions of
;; jemalloc:
;; https://issues.apache.org/jira/browse/ARROW-3507. This
;; is unfortunate because jemalloc increases performance:
;; https://arrow.apache.org/blog/2018/07/20/jemalloc/.
"-DARROW_JEMALLOC=OFF"
;; The CMake option ARROW_DEPENDENCY_SOURCE is a global
;; option that instructs the build system how to resolve
;; each dependency. SYSTEM = Finding the dependency in
;; system paths using CMake's built-in find_package
;; function, or using pkg-config for packages that do not
;; have this feature
"-DARROW_DEPENDENCY_SOURCE=SYSTEM"
"-Dxsimd_SOURCE=SYSTEM"
"-DARROW_RUNTIME_SIMD_LEVEL=NONE"
"-DARROW_SIMD_LEVEL=NONE"
"-DARROW_PACKAGE_KIND=Guix"
;; Split output into its component packages.
(string-append "-DCMAKE_INSTALL_PREFIX="
(assoc-ref %outputs "lib"))
(string-append "-DCMAKE_INSTALL_RPATH="
(assoc-ref %outputs "lib")
"/lib")
(string-append "-DCMAKE_INSTALL_BINDIR="
(assoc-ref %outputs "out")
"/bin")
(string-append "-DCMAKE_INSTALL_INCLUDEDIR="
(assoc-ref %outputs "include")
"/share/include")
"-DARROW_WITH_SNAPPY=ON"
"-DARROW_WITH_ZLIB=ON"
"-DARROW_WITH_ZSTD=ON"
"-DARROW_WITH_LZ4=ON"
"-DARROW_COMPUTE=ON"
"-DARROW_CSV=ON"
"-DARROW_DATASET=ON"
"-DARROW_FILESYSTEM=ON"
"-DARROW_HDFS=ON"
"-DARROW_JSON=ON"
;; Arrow Python C++ integration library (required for
;; building pyarrow). This library must be built against
;; the same Python version for which you are building
;; pyarrow. NumPy must also be installed. Enabling this
;; option also enables ARROW_COMPUTE, ARROW_CSV,
;; ARROW_DATASET, ARROW_FILESYSTEM, ARROW_HDFS, and
;; ARROW_JSON.
"-DARROW_PYTHON=ON"
;; Building the tests forces on all the
;; optional features and the use of static
;; libraries.
"-DARROW_BUILD_TESTS=OFF"
"-DBENCHMARK_ENABLE_GTEST_TESTS=OFF"
;;"-DBENCHMARK_ENABLE_TESTING=OFF"
"-DARROW_BUILD_STATIC=OFF")))
(inputs
(list boost
brotli
bzip2
double-conversion
gflags
glog
grpc
protobuf
python
python-numpy
rapidjson
re2
snappy
xsimd))
;; These are all listed under Requires.private in arrow.pc
(propagated-inputs
(list (list apache-thrift "lib")
lz4
utf8proc
zlib
(list zstd "lib")))
(native-inputs
(list pkg-config))
(outputs '("out" "lib" "include"))
(home-page "https://arrow.apache.org/")
(synopsis "Columnar in-memory analytics")
(description "Apache Arrow is a columnar in-memory analytics layer
designed to accelerate big data. It houses a set of canonical in-memory
representations of flat and hierarchical data along with multiple
language-bindings for structure manipulation. It also provides IPC and common
algorithm implementations.")
(license license:asl2.0)))
(define-public apache-arrow-0.16
(package
(name "apache-arrow")

4
gnu/packages/debian.scm
View file

@ -339,7 +339,7 @@ distributions such as Debian and Trisquel.")
(define-public dpkg
(package
(name "dpkg")
(version "1.21.8")
(version "1.21.12")
(source
(origin
(method git-fetch)
@ -348,7 +348,7 @@ distributions such as Debian and Trisquel.")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "1whb78pywdlm4v1ablgvvplqjn15b6qrwqkj0pihw5j77aakyz2s"))))
(base32 "08a72lhkgz4iiimdkqlmf58m31zrwqcs0741nbxxq1x3s9phc25m"))))
(build-system gnu-build-system)
(arguments
`(#:phases

8
gnu/packages/diffoscope.scm
View file

@ -245,7 +245,7 @@ install.")
(define-public reprotest
(package
(name "reprotest")
(version "0.7.21")
(version "0.7.22")
(source
(origin
(method git-fetch)
@ -254,8 +254,7 @@ install.")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"1jmnp6dwd91w00vfvph89cvgxwk0nvij8his9az5b72265jf9bxz"))))
(base32 "0qpjg37x2ha7lb113fb5cic5if3zv30zqijsmkq91ld909x30ggd"))))
(inputs
(list python-debian python-distro python-libarchive-c python-rstr))
(native-inputs
@ -296,8 +295,7 @@ install.")
(install-file "doc/reprotest.1" mandir1)
(mkdir-p docdir)
(install-file "./README.rst" docdir)
(install-file "./README-dev.rst" docdir))
#t)))))
(install-file "./README-dev.rst" docdir)))))))
(home-page "https://salsa.debian.org/reproducible-builds/reprotest")
(synopsis "Build software and check it for reproducibility")
(description "Reprotest builds the same source code twice in different

12
gnu/packages/dns.scm
View file

@ -290,7 +290,7 @@ prompt the user with the option to go with insecure DNS only.")
(define-public dnsmasq
(package
(name "dnsmasq")
(version "2.87")
(version "2.88")
(source (origin
(method url-fetch)
(uri (string-append
@ -298,7 +298,7 @@ prompt the user with the option to go with insecure DNS only.")
version ".tar.xz"))
(sha256
(base32
"0ynyi4mixhxhbfxb2bivinkrjc5zgj9lj5bzgvymc8vz98vc0a02"))))
"1cy1zci6vyhzczy6ncc5m9d7zsnnzs9mmwd6pr9w0h03l7nlsm13"))))
(build-system gnu-build-system)
(native-inputs
(list pkg-config))
@ -544,14 +544,14 @@ asynchronous fashion.")
(define-public nsd
(package
(name "nsd")
(version "4.4.0")
(version "4.6.1")
(source
(origin
(method url-fetch)
(uri (string-append "https://www.nlnetlabs.nl/downloads/nsd/nsd-"
version ".tar.gz"))
(sha256
(base32 "0dl8iriy0mscppfa6ar5qcglgvxw87140abwxyksak1lk7fnzkfg"))))
(base32 "0ym2fgkjar94y99lyvp93p7jpj33ysprvqd7py28xxn37shs6q1z"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags
@ -871,7 +871,7 @@ Extensions} (DNSSEC).")
(define-public knot
(package
(name "knot")
(version "3.2.3")
(version "3.2.4")
(source
(origin
(method git-fetch)
@ -880,7 +880,7 @@ Extensions} (DNSSEC).")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "117q8jllaakd6gv0mfkq45sigy5c8j8jbyxiwna3wan0mjx81fhv"))
(base32 "0b6fnrdy5zqn3mnn5cl92j0m7k9l6hh4gnr92qpirqf54bl2lfm2"))
(modules '((guix build utils)))
(snippet
'(begin

6
gnu/packages/education.scm
View file

@ -547,7 +547,7 @@ specialized device.")
(inputs
(list alsa-lib
coreutils-minimal ;for patched 'env' shebang
ffmpeg
ffmpeg-4
freetype
lame
libass
@ -582,7 +582,7 @@ a pen-tablet display and a beamer.")
(define-public fet
(package
(name "fet")
(version "6.7.1")
(version "6.7.7")
(source
(origin
(method url-fetch)
@ -591,7 +591,7 @@ a pen-tablet display and a beamer.")
(list (string-append directory base)
(string-append directory "old/" base))))
(sha256
(base32 "0vwddhmr9n21q4yhkcz6iakkff91hvjcfzhg84zvf1ap30xx09hk"))))
(base32 "08rm3yka3swr6wf3lcmzh2jlq5ajxi8c6nd2likqzvbg6plrjx6b"))))
(build-system gnu-build-system)
(arguments
(list

582
gnu/packages/emacs-xyz.scm
View file

File diff suppressed because it is too large Load diff

8
gnu/packages/emulators.scm
View file

@ -323,7 +323,7 @@ console.")
bluez
curl
eudev
ffmpeg
ffmpeg-4
font-wqy-microhei
freetype
glew
@ -1471,7 +1471,7 @@ as RetroArch.")
"--disable-builtinminiupnpc")))))))
(inputs
`(("alsa-lib" ,alsa-lib)
("ffmpeg" ,ffmpeg)
("ffmpeg" ,ffmpeg-4)
("freetype" ,freetype)
("libxinerama" ,libxinerama)
("libxkbcommon" ,libxkbcommon)
@ -2035,7 +2035,7 @@ assembler, and debugger for the Intel 8085 microprocessor.
(list libcdio
sdl2
gtk+
ffmpeg
ffmpeg-4
libxv
libarchive
pulseaudio))
@ -2322,7 +2322,7 @@ elseif(FALSE)"))
(native-inputs (list pkg-config python))
(inputs (list bash
cityhash
ffmpeg
ffmpeg-4
glew
glslang
libpng

6
gnu/packages/engineering.scm
View file

@ -2437,7 +2437,7 @@ comments.")))
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "02976k91ypv41rqdl27jbmyhnhgx7k5bj520lcqs8qzgcdsynd03"))))
(base32 "0wsfz2jqfhmqshyr1n4qxcc3c6a96gyll4h34vn2zzvvcnncn9rb"))))
(build-system qt-build-system)
(native-inputs
(list doxygen
@ -3886,7 +3886,7 @@ form, numpad.
(define-public rizin
(package
(name "rizin")
(version "0.4.0")
(version "0.4.1")
(source (origin
(method url-fetch)
(uri (string-append
@ -3894,7 +3894,7 @@ form, numpad.
version "/rizin-src-v" version ".tar.xz"))
(sha256
(base32
"0nkb6v9lks25w5sv5s6p2ghgqnnnsf39md8nlx1cy4z89xlaisq9"))))
"1f5zzlnr2na4hkvcwn4n9cjlk6595945vwrw89pa683qk5mrb7b6"))))
(build-system meson-build-system)
(arguments
(list

40
gnu/packages/erlang.scm
View file

@ -7,6 +7,7 @@
;;; Copyright © 2020-2022 Hartmut Goebel <h.goebel@crazy-compilers.com>
;;; Copyright © 2021 Oskar Köök <oskar@maatriks.ee>
;;; Copyright © 2021 Cees de Groot <cg@evrl.com>
;;; Copyright © 2022 jgart <jgart@dismail.de>
;;;
;;; This file is part of GNU Guix.
;;;
@ -280,6 +281,28 @@ Mozilla's canonical set.")
printing extending the io:format syntax to add colours.")
(license license:expat)))
(define-public erlang-yamerl
(package
(name "erlang-yamerl")
(version "0.10.0")
(source
(origin
(method git-fetch)
(uri (git-reference
;; There are no tests included on Hex.
(url "https://github.com/yakaz/yamerl")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0if8abgmispcfk7zhd0a5dndzwzbsmqrbyrm5shk375r2dbbwak6"))))
(build-system rebar-build-system)
(synopsis "YAML and JSON parser in pure Erlang")
(description
"Erlang application to parse YAML 1.1 and YAML 1.2 documents, as well as
JSON documents.")
(home-page "https://hexdocs.pm/yamerl/")
(license license:bsd-2)))
(define-public erlang-covertool
(package
(name "erlang-covertool")
@ -499,6 +522,23 @@ Erlang's type language, and can also be used for the model-based random
testing of stateful systems.")
(license license:gpl3+)))
(define-public erlang-jsx
(package
(name "erlang-jsx")
(version "3.1.0")
(source (origin
(method url-fetch)
(uri (hexpm-uri "jsx" version))
(sha256
(base32
"1wr7jkxm6nlgvd52xhniav64xr9rml2ngb35rwjwqlqvq7ywhp0c"))))
(build-system rebar-build-system)
(synopsis "Streaming, evented JSON parsing toolkit")
(description
"An Erlang application for consuming, producing and manipulating json.")
(home-page "https://github.com/talentdeficit/jsx")
(license license:expat)))
(define-public erlang-providers
(package
(name "erlang-providers")

39
gnu/packages/file-systems.scm
View file

@ -599,7 +599,7 @@ from the bcachefs-tools package. It is meant to be used in initrds.")
(define-public exfatprogs
(package
(name "exfatprogs")
(version "1.1.3")
(version "1.2.0")
(source
(origin
(method git-fetch)
@ -608,7 +608,7 @@ from the bcachefs-tools package. It is meant to be used in initrds.")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "14lgwvbg6jibsdpzpcj484p9q4ixawyjxi9hw23w89c6870gglw9"))))
(base32 "02a6178brikg12wl80h9qgxyhpm6mly0jnml0rs9phb7lkbv9kzh"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags
@ -752,6 +752,41 @@ transaction log.
from the jfsutils package. It is meant to be used in initrds.")
(license (package-license jfsutils))))
(define-public nilfs-utils
(package
(name "nilfs-utils")
(version "2.2.9")
(source
(origin
(method url-fetch)
(uri (string-append "https://nilfs.sourceforge.io/download"
"/nilfs-utils-" version ".tar.bz2"))
(sha256
(base32 "15vsayvzr8nc29n939sz9ddq46vpn53rp8h8qv484h88qac3kxjx"))))
(build-system gnu-build-system)
(arguments
(list
#:configure-flags
#~(list "--enable-static=no")
#:phases
#~(modify-phases %standard-phases
(add-before 'bootstrap 'force-bootstrap
(lambda _
(delete-file "configure")
(substitute* "configure.ac"
(("\\[/etc\\]") "[${prefix}/etc]")
(("\\[/sbin\\]") "[${prefix}/sbin]")))))))
(inputs
(list (list util-linux "lib")))
(native-inputs (list autoconf automake libtool))
(home-page "https://nilfs.sourceforge.io/")
(synopsis "Continuous Snapshotting Filesystem")
(description
"NILFS is a log-structured file system supporting versioning of the entire
file system and continuous snapshotting, which allows users to even restore
files mistakenly overwritten or destroyed just a few seconds ago.")
(license license:gpl3+)))
(define-public disorderfs
(package
(name "disorderfs")

17
gnu/packages/finance.scm
View file

@ -271,14 +271,14 @@ Accounting.")
(define-public homebank
(package
(name "homebank")
(version "5.5.8")
(version "5.6")
(source (origin
(method url-fetch)
(uri (string-append "http://homebank.free.fr/public/homebank-"
version ".tar.gz"))
(sha256
(base32
"11fgmdqsnxdqma1ffljbcl7w1ahx0s5p41hjy600f8zarsrmnyjh"))))
"1ig00d3wby6lisz3vbyb5qm7h4a6npfwqyphdl8fjgibzpapq5a1"))))
(build-system glib-or-gtk-build-system)
(native-inputs
(list pkg-config intltool))
@ -1645,7 +1645,7 @@ a client based on Qt. This is a fork of Bitcoin Core.")
(define-public libofx
(package
(name "libofx")
(version "0.10.7")
(version "0.10.9")
(source (origin
(method git-fetch)
(uri (git-reference
@ -1654,13 +1654,14 @@ a client based on Qt. This is a fork of Bitcoin Core.")
(file-name (git-file-name name version))
(sha256
(base32
"1k3ygavyb9b3f1ra62dsa46iiia0a1588yn3zy7bh7w4vfcrbd6d"))))
"120hyhs4fkxrgpvd2p0hpf5v8dq0jjql2fzllk77m33m1c82pr18"))))
(build-system gnu-build-system)
(arguments
(list
#:parallel-build? #f ;fails with -j64
#:configure-flags
#~(list (string-append "--with-opensp-includes="
#~(list "--disable-static"
(string-append "--with-opensp-includes="
(search-input-directory %build-inputs
"include/OpenSP")))))
(native-inputs
@ -1905,8 +1906,8 @@ generate a variety of reports from them, and provides a web interface.")
(define-public emacs-beancount
;; Note that upstream has not made any release since this project moved
;; into its own repository (it was originally part of beancount itself)
(let ((commit "dbafe6a73d90c1f64d457b356b9dbb43499f70d5")
(revision "0"))
(let ((commit "687775da63784d153a3c1cfee9801090c6b51842")
(revision "1"))
(package
(name "emacs-beancount")
(version (git-version "0.0.0" revision commit))
@ -1918,7 +1919,7 @@ generate a variety of reports from them, and provides a web interface.")
(commit commit)))
(sha256
(base32
"0v9bws2gv5b00x829p7hrcxqgdp7iwxvv1vhfjka81qrw6w1fvjw"))
"08383yqqanx29al1hg1r6ndx3gwjg6fj7kl340f1zz9m9cfiyvg3"))
(file-name (git-file-name name version))))
(build-system emacs-build-system)
(home-page "https://github.com/beancount/beancount-mode")

431
gnu/packages/firmware.scm
View file

@ -34,6 +34,7 @@
#:use-module (guix git-download)
#:use-module (guix build-system gnu)
#:use-module (guix build-system meson)
#:use-module (guix build-system trivial)
#:use-module (gnu packages)
#:use-module (gnu packages admin)
#:use-module (gnu packages autotools)
@ -72,7 +73,8 @@
#:use-module (gnu packages tls)
#:use-module (gnu packages version-control)
#:use-module (gnu packages web)
#:use-module (gnu packages xml))
#:use-module (gnu packages xml)
#:use-module (ice-9 match))
(define-public ath9k-htc-firmware
(package
@ -342,6 +344,82 @@ broadband modem as found, for example, on PinePhone.")
(home-page "https://gitlab.com/mobian1/devices/eg25-manager")
(license license:gpl3+)))
(define* (make-openbios-package name arch)
(let ((target (cond
((string-suffix? "ppc" arch)
"powerpc-linux-gnu")
((string-suffix? "amd64" arch)
"x86_64-linux-gnu")
((string-suffix? "x86" arch)
"i686-linux-gnu")
(else (string-append arch "-linux-gnu")))))
(package
(name name)
(version "1.1")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/openbios/openbios")
(commit (string-append "v" version))))
(file-name (git-file-name "openbios" version))
(patches (search-patches "openbios-gcc-warnings.patch"))
(sha256
(base32
"11cr0097aiw4hc07v5hfl95753ikyra5ig4nv899ci7l42ilrrbr"))))
(build-system gnu-build-system)
(arguments
(list #:tests? #f ;no tests
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'build-reproducibly
(lambda _
(substitute* "Makefile.target"
(("TZ=UTC date \\+")
"TZ=UTC date --date=@1 +"))))
(replace 'configure
(lambda _
(invoke "./config/scripts/switch-arch" #$arch)))
(replace 'install
(lambda _
(let ((build-target
(if (string-contains #$arch "-")
(car (reverse (string-split #$arch #\-)))
#$arch)))
(for-each (lambda (elf)
(install-file elf
(string-append #$output
"/share/firmware")))
(find-files (string-append "obj-" build-target)
"\\.elf$"))))))))
(native-inputs
(append (if (string-prefix? (%current-system) target)
'()
(list (cross-gcc target) (cross-binutils target)))
(list libxslt which)))
(home-page "https://openfirmware.info/Welcome_to_OpenBIOS")
(synopsis "Open Firmware implementation")
(description
"OpenBIOS is an implementation of the IEEE 1275-1994 \"Open Firmware\"
specification. It can be used as a system firmware, as a boot loader, or
provide OpenFirmware functionality on top of an already running system.")
;; Some files are GPLv2 only.
(license license:gpl2))))
(define-public openbios-qemu-ppc
(let ((base (make-openbios-package "openbios-qemu-ppc" "qemu-ppc")))
(package
(inherit base)
(arguments
(substitute-keyword-arguments (package-arguments base)
((#:phases phases)
#~(modify-phases #$phases
(add-after 'install 'rename-executable
(lambda _
(with-directory-excursion #$output
(rename-file "share/firmware" "share/qemu")
(rename-file "share/qemu/openbios-qemu.elf"
"share/qemu/openbios-ppc")))))))))))
(define* (make-opensbi-package platform name #:optional (arch "riscv64"))
(package
(name name)
@ -352,7 +430,7 @@ broadband modem as found, for example, on PinePhone.")
(uri (git-reference
(url "https://github.com/riscv-software-src/opensbi")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(file-name (git-file-name "opensbi" version))
(sha256
(base32 "0xlnhl965286kvizyjm571qbhj3l5n71a02dmbmgxzcqapzgi9wk"))))
(build-system gnu-build-system)
@ -399,10 +477,33 @@ executing in M-mode.")
(define-public opensbi-generic
(make-opensbi-package "generic" "opensbi-generic"))
(define-public opensbi-qemu
(package
(inherit opensbi-generic)
(name "opensbi-qemu")
(native-inputs '())
(inputs (list opensbi-generic))
(build-system trivial-build-system)
(arguments
(list #:modules '((guix build utils))
#:builder
#~(begin
(use-modules ((guix build utils)))
(let ((opensbi-riscv64 (search-input-file %build-inputs
"fw_dynamic.bin"))
(out (string-append #$output "/share/qemu")))
(mkdir-p out)
(symlink opensbi-riscv64
(string-append
out "/opensbi-riscv64-generic-fw_dynamic.bin"))))))
(synopsis "OpenSBI firmware files for QEMU")
(description
"This package contains OpenSBI firmware files for use with QEMU.")))
(define-public seabios
(package
(name "seabios")
(version "1.15.0")
(version "1.16.1")
(source
(origin
(method git-fetch)
@ -411,76 +512,52 @@ executing in M-mode.")
(commit (string-append "rel-" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0gnsfmbgcvihsap8sz8c2n3qs439q44i3pwrms2nv3xcnf1sclj9"))))
(base32 "0gph1hf70jjpx55qc0lzx2yghkipg9dnsin07i4jajk0p1jpd2d0"))
(modules '((guix build utils)))
(snippet
#~(begin
;; Delete IASL-generated files.
(for-each delete-file (find-files "." "\\.hex$"))))))
(build-system gnu-build-system)
(native-inputs (list python-wrapper))
(native-inputs
(list acpica python-wrapper))
(arguments
`(#:tests? #f ; no check target
#:make-flags '("EXTRAVERSION=-guix") ;upstream wants distros to set this
#:modules (,@%gnu-build-system-modules
(ice-9 match))
#:phases
(modify-phases %standard-phases
(replace 'configure
(lambda _
;; Create the ".version" file that is present in release tarballs.
;; Otherwise this will be regarded as an "unclean" build, and the
;; build system ends up encoding the build date in the binaries.
(call-with-output-file ".version"
(lambda (port)
(format port ,(package-version this-package))))
(setenv "CC" "gcc")))
(add-after 'build 'build-vgabios
(lambda* (#:key (make-flags ''()) #:allow-other-keys)
(for-each
(match-lambda
((target . config)
(let* ((dot-config (string-append (getcwd) "/" target "/.config"))
(flags (append make-flags
(list (string-append "KCONFIG_CONFIG="
dot-config)
(string-append "OUT=" target "/")))))
(mkdir target)
(call-with-output-file dot-config
(lambda (port)
(for-each (lambda (entry)
(if (string-suffix? "=n" entry)
(format port "# CONFIG_~a is not set~%"
(string-drop-right entry 2))
(format port "CONFIG_~a~%" entry)))
(cons "BUILD_VGABIOS=y" config))))
(apply invoke "make" (append flags '("oldnoconfig")))
(apply invoke "make" flags)
(link (string-append target "/bios.bin")
(string-append "out/" target ".bin")))))
;; These tuples are modelled after Debians packaging:
;; https://salsa.debian.org/qemu-team/seabios/-/blob/master/debian/rules
'(("ati" . ("VGA_ATI=y" "VGA_PCI=y"))
("bochs-display" . ("DISPLAY_BOCHS=y" "VGA_PCI=y"))
("cirrus" . ("VGA_CIRRUS=y" "VGA_PCI=y"))
("stdvga" . ("VGA_BOCHS=y" "VGA_PCI=y"))
("virtio" . ("VGA_BOCHS_VIRTIO=y" "VGA_PCI=y"))
("vmware" . ("VGA_BOCHS_VMWARE=y" "VGA_PCI=y"))
("qxl" . ("VGA_BOCHS_QXL=y" "VGA_PCI=y"))
("isavga" . ("VGA_BOCHS=y" "VGA_PCI=n"))
("ramfb" . ("VGA_RAMFB=y" "VGA_PCI=n"))))))
(replace 'install
(lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(fmw (string-append out "/share/firmware")))
(mkdir-p fmw)
(copy-file "out/bios.bin" (string-append fmw "/bios.bin"))
(for-each (lambda (bios)
(install-file bios fmw))
(find-files "out" "\\.bin$"))
(with-directory-excursion fmw
;; QEMU 1.7 and later looks only for the latter.
(symlink "bios.bin" "bios-256k.bin"))))))))
(list
#:tests? #f ;no tests
#:make-flags
;; If EXTRAVERSION is not set the build system will embed the current
;; date in binaries. Use this opportunity to personalize as recommended
;; by Build_overview.md.
#~'("EXTRAVERSION=/GNU Guix"
"V=1") ;build verbosely
#:phases
#~(modify-phases %standard-phases
(replace 'configure
(lambda _
;; Ensure this file is present in case we're building from a git
;; checkout instead of release tarball.
(call-with-output-file ".version"
(lambda (port)
(format port #$(package-version this-package))))
;; If we use (cc-for-target) then we have the system prefix
;; twice or we might have the wrong prefix.
(setenv "CC" "gcc")))
(add-before 'build 'build-description-tables
(lambda _
;; Regenerate the ACPI description tables.
(invoke "make" "iasl")
;; Clear temporary files added by the iasl target.
(invoke "make" "clean")))
(replace 'install
(lambda _
(install-file "out/bios.bin"
(string-append #$output "/share/firmware")))))))
(home-page "https://www.seabios.org/SeaBIOS")
(synopsis "x86 BIOS implementation")
(description "SeaBIOS is an implementation of a 16bit x86 BIOS. SeaBIOS
can run in an emulator or it can run natively on X86 hardware with the use of
coreboot.")
(supported-systems '("i686-linux" "x86_64-linux"))
;; Dual licensed.
(license (list license:gpl3+ license:lgpl3+
;; src/fw/acpi-dsdt.dsl is lgpl2
@ -489,6 +566,228 @@ coreboot.")
;; cpl with a linking exception.
license:cpl1.0))))
(define-public seabios-qemu
(package/inherit seabios
(name "seabios-qemu")
(native-inputs
(if (member (%current-system) '("i686-linux" "x86_64-linux"))
(package-native-inputs seabios)
(modify-inputs (package-native-inputs seabios)
(prepend (cross-gcc "i686-linux-gnu")
(cross-binutils "i686-linux-gnu")))))
(supported-systems %supported-systems)
(arguments
(substitute-keyword-arguments (package-arguments seabios)
((#:modules modules %gnu-build-system-modules)
`((ice-9 match)
(ice-9 threads)
,@modules))
((#:phases phases)
#~(modify-phases #$phases
#$@(match (%current-system)
((or "i686-linux" "x86_64-linux")
#~())
(_
#~((add-after 'configure 'configure-cross
(lambda _
(substitute* "Makefile"
(("CROSS_PREFIX=")
"CROSS_PREFIX=i686-linux-gnu-")))))))
(replace 'build
(lambda* (#:key (make-flags #~'()) #:allow-other-keys)
;; Note: These BIOS configurations are taken from QEMUs roms/
;; directory.
(let ((biosen
'( ;; The standard BIOS using default options.
("bios-256k" . ("QEMU=y" "ROM_SIZE=256" "ATA_DMA=n"))
;; A minimal BIOS for old QEMU machine types.
("bios-128k"
. ("QEMU=y" "ROM_SIZE=128" "ATA_DMA=n" "BOOTSPLASH=n"
"XEN=n" "USB_OHCI=n" "USB_XHCI=n" "USB_UAS=n"
"SDCARD=n" "TCGBIOS=n" "MPT_SCSI=n" "ESP_SCSI=n"
"MEGASAS=n" "PVSCSI=n" "NVME=n" "USE_SMM=n"
"VGAHOOKS=n" "HOST_BIOS_GEOMETRY=n" "ACPI_PARSE=n"))
;; Minimal BIOS for the "microvm" machine type.
("bios-microvm"
. ("QEMU=y" "ROM_SIZE=128" "XEN=n" "BOOTSPLASH=n"
"ATA=n" "AHCI=n" "SDCARD=n" "PVSCSI=n" "ESP_SCSI=n"
"LSI_SCSI=n" "MEGASAS=n" "MPT_SCSI=n" "FLOPPY=n"
"FLASH_FLOPPY=n" "NVME=n" "PS2PORT=n" "USB=n"
"LPT=n" "RTC_TIMER=n" "USE_SMM=n" "PMTIMER=n"
"TCGBIOS=n" "HARDWARE_IRQ=n" "ACPI_PARSE=y"))))
(vgabiosen
'(("ati" . ("VGA_ATI=y" "VGA_PCI=y"))
("bochs-display" . ("DISPLAY_BOCHS=y" "VGA_PCI=y"))
("cirrus" . ("VGA_CIRRUS=y" "VGA_PCI=y"))
("stdvga" . ("VGA_BOCHS=y" "VGA_PCI=y"))
("virtio" . ("VGA_BOCHS=y" "VGA_BOCHS_VIRTIO=y"
"VGA_PCI=y"))
("vmware" . ("VGA_BOCHS=y" "VGA_BOCHS_VMWARE=y"
"VGA_PCI=y"))
("qxl" . ("VGA_BOCHS=y" "VGA_BOCHS_QXL=y"
"VGA_PCI=y"))
("isavga" . ("VGA_BOCHS=y" "VGA_PCI=n"))
("ramfb" . ("VGA_RAMFB=y" "VGA_PCI=n")))))
(mkdir "out")
(n-par-for-each
(parallel-job-count)
(match-lambda
((target . config)
(let* ((dot-config (string-append (getcwd) "/" target
"/.config"))
(flags (append
make-flags
(list (string-append "KCONFIG_CONFIG="
dot-config)
(string-append "OUT=" target "/")))))
(mkdir target)
(call-with-output-file dot-config
(lambda (port)
(for-each (lambda (entry)
(format port "CONFIG_~a~%" entry))
config)))
(apply invoke "make" "oldnoconfig" flags)
(apply invoke "make" flags)
(link (string-append target "/"
(if (string-prefix? "vgabios" target)
"vgabios.bin" "bios.bin"))
(string-append "out/" target ".bin")))))
(append biosen
(map (lambda (pair)
`(,(string-append "vgabios-" (car pair))
.
,(cons "BUILD_VGABIOS=y" (cdr pair))))
vgabiosen))))))
(replace 'install
(lambda _
(let ((firmware (string-append #$output "/share/qemu")))
(for-each (lambda (bios)
(install-file bios firmware))
(find-files "out" "\\.bin$"))
(with-directory-excursion firmware
;; Compatibility symlinks for QEMU.
(symlink "bios-128k.bin" "bios.bin")
(symlink "vgabios-isavga.bin" "vgabios.bin")))))))))))
(define-public sgabios
;; There are no tags in the repository.
(let ((commit "72f39d48bedf044e202fd51fecf3e2218fc2ae66")
(revision "0"))
(package
(name "sgabios")
(version (git-version "0.0" revision commit))
(home-page "https://gitlab.com/qemu-project/sgabios")
(source (origin
(method git-fetch)
(uri (git-reference (url home-page) (commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"0ybl021i0xaz18wzq4q13ifypy5b3dj8m11c8m0qdiq00g06vm0i"))))
(build-system gnu-build-system)
(arguments
(list #:make-flags
#~'(#$@(if (member (%current-system) '("i686-linux" "x86_64-linux"))
#~("CC=gcc")
#~("CC=i686-linux-gnu-gcc"
"LD=i686-linux-gnu-ld"
"OBJCOPY=i686-linux-gnu-objcopy"))
"HOSTCC=gcc")
#:parallel-build? #f
#:tests? #f ;no tests
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'build-reproducibly
(lambda _
(substitute* "Makefile"
(("BUILD_DATE = .*")
"BUILD_DATE = \\\"Jan 1 1970\\\"\n")
(("BUILD_SHORT_DATE = .*")
"BUILD_SHORT_DATE = \\\"1/1/70\\\"\n"))))
(delete 'configure)
(replace 'install
(lambda _
(install-file "sgabios.bin"
(string-append #$output "/share/qemu")))))))
(native-inputs
(if (member (%current-system) '("i686-linux" "x86_64-linux"))
'()
(list (cross-gcc "i686-linux-gnu")
(cross-binutils "i686-linux-gnu"))))
(synopsis "Serial graphics adapter BIOS")
(description
"SGABIOS provides a means for legacy PC software to communicate with an
attached serial console as if a VGA card is attached. It is designed to be
inserted into a BIOS as an option ROM to provide over a serial port the display
and input capabilites normally handled by a VGA adapter and a keyboard, and
additionally provide hooks for logging displayed characters for later collection
after an operating system boots.")
(license license:asl2.0))))
(define-public edk2-tools
(package
(name "edk2-tools")
(version "202211")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/tianocore/edk2")
(commit (string-append "edk2-stable" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1264542mm0mffjcmw5sw34h94n405swz5z56rw1ragp3j62144iy"))))
(build-system gnu-build-system)
(arguments
(list #:make-flags
#~(list (string-append "BUILD_CC=" #$(cc-for-target)))
#:test-target "Tests"
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'change-directory
(lambda _
(chdir "BaseTools")))
(add-after 'change-directory 'disable-some-tools
(lambda _
;; Disable building brotli and xz, since we package them
;; separately, and it would require fetching submodules.
(substitute* "Source/C/GNUmakefile"
(("^[[:blank:]]+BrotliCompress[[:blank:]]+\\\\")
"\\")
(("^[[:blank:]]+LzmaCompress[[:blank:]]+\\\\")
"\\"))))
(replace 'build
(lambda* (#:key (make-flags #~'()) #:allow-other-keys)
;; The default build target also runs tests.
(apply invoke "make" "-C" "Source/C" make-flags)))
(delete 'configure)
(replace 'install
(lambda _
(mkdir #$output)
(copy-recursively "Source/C/bin"
(string-append #$output "/bin")))))))
(native-inputs
(list python-wrapper))
(inputs
(list `(,util-linux "lib"))) ;for libuuid
(home-page
"https://github.com/tianocore/tianocore.github.io/wiki/EDK-II-Tools-List")
(synopsis "EFI development tools")
(description
"This package contains tools for processing UEFI firmware content.
Executables included are:
@itemize
@item @code{EfiRom}: Build Option ROM images.
@item @code{GenFfs}: Generate FFS files.
@item @code{GenFv}: Generate a PI firmware volume image.
@item @code{GenFw}: Get image data from PE32 files.
@item @code{GenSec}: Generate EFI_SECTION type files.
@item @code{VfrCompile}: Parse preprocessed UEFI and Framework VFR files.
@item @code{VolInfo}: Display the contents of a firmware volume.
@end itemize")
(license license:bsd-2)))
(define-public ovmf
(let ((commit "13a50a6fe1dcfa6600c38456ee24e0f9ecf51b5f")
(revision "1"))

4
gnu/packages/flashing-tools.scm
View file

@ -66,7 +66,9 @@
version ".tar.bz2"))
(sha256
(base32
"0ax4kqnh7kd3z120ypgp73qy1knz47l6qxsqzrfkd97mh5cdky71"))))
"0ax4kqnh7kd3z120ypgp73qy1knz47l6qxsqzrfkd97mh5cdky71"))
(patches
(search-patches "flashrom-fix-building-on-aarch64.patch"))))
(build-system gnu-build-system)
(inputs (list dmidecode pciutils libusb libftdi))
(native-inputs (list pkg-config))

37
gnu/packages/fpga.scm
View file

@ -65,40 +65,39 @@
#:use-module (gnu packages libusb))
(define-public abc
(let ((commit "5ae4b975c49c")
(revision "1"))
(let ((commit "70cb339f869e")
(revision "2"))
(package
(name "abc")
(version (git-version "0.0" revision commit))
(source (origin
(method url-fetch)
(uri
(string-append "https://bitbucket.org/alanmi/abc/get/" commit ".zip"))
(file-name (string-append name "-" version "-checkout.zip"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/berkeley-abc/abc")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1syygi1x40rdryih3galr4q8yg1w5bvdzl75hd27v1xq0l5bz3d0"))))
"1ngxg4jvz8vwm74sbidysgz3v5lrzjcabkqj4nhcksi6hnhyc9m8"))))
(build-system gnu-build-system)
(native-inputs
(list unzip))
(inputs
(list readline))
(arguments
`(#:tests? #f ; no check target
#:phases
(modify-phases %standard-phases
(delete 'configure)
(replace 'install
(lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(out-bin (string-append out "/bin")))
(install-file "abc" out-bin)))))))
(list #:license-file-regexp "copyright.txt"
#:tests? #f ; no tests
#:phases
#~(modify-phases %standard-phases
(delete 'configure)
(replace 'install
(lambda _
(install-file "abc" (string-append #$output "/bin")))))))
(home-page "https://people.eecs.berkeley.edu/~alanmi/abc/")
(synopsis "Sequential logic synthesis and formal verification")
(description "ABC is a program for sequential logic synthesis and
formal verification.")
(license
(license:non-copyleft "https://fedoraproject.org/wiki/Licensing:MIT#Modern_Variants")))))
(license:non-copyleft
"https://people.eecs.berkeley.edu/~alanmi/abc/copyright.htm")))))
(define-public iverilog
(package

2
gnu/packages/game-development.scm
View file

@ -2665,7 +2665,7 @@ utilities frequently used in roguelikes.")
`(("alsa-lib" ,alsa-lib)
("curl" ,curl)
("freetype" ,freetype)
("ffmpeg" ,ffmpeg)
("ffmpeg" ,ffmpeg-4)
("libjpeg" ,libjpeg-turbo)
("libogg" ,libogg)
("libpng" ,libpng)

42
gnu/packages/games.scm
View file

@ -52,7 +52,7 @@
;;; Copyright © 2020 Vitaliy Shatrov <D0dyBo0D0dyBo0@protonmail.com>
;;; Copyright © 2020 Jack Hill <jackhill@jackhill.us>
;;; Copyright © 2020 Vincent Legoll <vincent.legoll@gmail.com>
;;; Copyright © 2020, 2021 Michael Rohleder <mike@rohleder.de>
;;; Copyright © 2020, 2021, 2022 Michael Rohleder <mike@rohleder.de>
;;; Copyright © 2020 Trevor Hass <thass@okstate.edu>
;;; Copyright © 2020, 2021 Liliana Marie Prikler <liliana.prikler@gmail.com>
;;; Copyright © 2020 Lu hux <luhux@outlook.com>
@ -7930,7 +7930,7 @@ ncurses for text display.")
(define-public naev
(package
(name "naev")
(version "0.9.4")
(version "0.10.0")
(source
(origin
(method git-fetch)
@ -7940,7 +7940,7 @@ ncurses for text display.")
(recursive? #t))) ; for game data
(file-name (git-file-name name version))
(sha256
(base32 "0isswidhxhs2q5c4cxryjr8y8ibfxckpfyccly3b4lg1nxvm5gjv"))))
(base32 "183dbi4a91xggxm1rmn7vr8rq519yz7b3zhrd03azsg6fxylv9wn"))))
(build-system meson-build-system)
(arguments
;; XXX: Do not add debugging symbols, which cause the build to fail.
@ -7949,7 +7949,8 @@ ncurses for text display.")
(native-inputs
(list gettext-minimal pkg-config))
(inputs
(list freetype
(list enet
freetype
glpk
libpng
libunibreak
@ -7959,6 +7960,7 @@ ncurses for text display.")
luajit
openal
openblas
pcre2
physfs
python
python-pyyaml
@ -8478,7 +8480,7 @@ to download and install them in @file{$HOME/.stepmania-X.Y/Songs} directory.")
(native-inputs
(list pkg-config))
(inputs
(list cairo ffmpeg pango sdl2 sdl2-image))
(list cairo ffmpeg-4 pango sdl2 sdl2-image))
(home-page "https://github.com/fmang/oshu/")
(synopsis "Rhythm game in which you click on circles")
(description "@i{oshu!} is a minimalist variant of the @i{osu!} rhythm game,
@ -8885,7 +8887,7 @@ fight each other on an arena-like map.")
(define-public flare-engine
(package
(name "flare-engine")
(version "1.13.04")
(version "1.14")
(source (origin
(method git-fetch)
(uri (git-reference
@ -8894,7 +8896,7 @@ fight each other on an arena-like map.")
(file-name (git-file-name name version))
(sha256
(base32
"042n2r9whnd3kncf3k89dcl1srn7p2jk6kdc0lb2hbwff55iylnw"))))
"1gyaxr6zykwg5kg9xc3vlb5a6fas4z3zbk53y0zlfl35n4vqlh84"))))
(build-system cmake-build-system)
(arguments
(list
@ -8914,7 +8916,7 @@ action RPGs.")
(define-public flare-game
(package
(name "flare-game")
(version "1.13.04")
(version "1.14")
(source (origin
(method git-fetch)
(uri (git-reference
@ -8923,7 +8925,7 @@ action RPGs.")
(file-name (git-file-name name version))
(sha256
(base32
"18rdrwv7p5rvmlah5pl9vbc09xlb8id75a7c73yn2sxkm6cf5c2l"))))
"1as9dsg0ddz14jjk4y5nj0ml20cwncrcnbdk10r1jaa2vss9bbn3"))))
(build-system cmake-build-system)
(arguments
(list
@ -9318,7 +9320,7 @@ play with up to four players simultaneously. It has network support.")
(string-append "../hedgewars-src-" #$version)
(install-file "misc/hedgewars.png" icons))))))))
(inputs
(list ffmpeg
(list ffmpeg-4
freeglut
ghc-entropy
ghc-hslogger
@ -10336,10 +10338,10 @@ etc. You can also play games on FICS or against an engine.")
(license license:gpl2+)))
(define-public stockfish
(let ((neural-network-revision "6877cd24400e")) ; also update hash below
(let ((neural-network-revision "ad9b42354671")) ; also update hash below
(package
(name "stockfish")
(version "15")
(version "15.1")
(source
(origin
(method git-fetch)
@ -10348,7 +10350,7 @@ etc. You can also play games on FICS or against an engine.")
(commit (string-append "sf_" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1v19v6qhwbf31wpc3qcih4dvqxwqkh0p426skgjin6ags31hkbmh"))))
(base32 "0zmnv8vbhhid73pjyxg56r4ckm887znv4d55br370plm3p5b56xa"))))
(build-system gnu-build-system)
(inputs
`(("neural-network"
@ -10358,7 +10360,7 @@ etc. You can also play games on FICS or against an engine.")
neural-network-revision ".nnue"))
(sha256
(base32
"1qyna598c0v7gdpycc6kpl12h5a2wa50dqray6gv208f80jcsxv8"))))))
"11mpdhnsfggldgvmzwmya64pp3fndyppi2fkdf8kfhbi8qsl56xd"))))))
(arguments
`(#:tests? #f
#:make-flags (list "-C" "src"
@ -10388,11 +10390,13 @@ etc. You can also play games on FICS or against an engine.")
(copy-file (assoc-ref inputs "neural-network")
(format #f "src/nn-~a.nnue"
,neural-network-revision))))
;; Guix doesn't use a multiarch gcc.
(add-after 'unpack 'remove-m-flag
(add-after 'unpack 'remove-m-flag-and-net-target
(lambda _
(substitute* "src/Makefile"
(("-m\\$\\(bits\\)") "")))))))
;; Guix doesn't use a multiarch gcc.
(("-m\\$\\(bits\\)") "")
;; Dont depend on net target.
((": net") ": ")))))))
(synopsis "Strong chess engine")
(description
"Stockfish is a very strong chess engine. It is much stronger than the
@ -11020,7 +11024,7 @@ disassembly of the DOS version, extended with new features.")
(define-public fheroes2
(package
(name "fheroes2")
(version "0.9.11")
(version "1.0.0")
(source
(origin
(method git-fetch)
@ -11029,7 +11033,7 @@ disassembly of the DOS version, extended with new features.")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "1m8649srzg3j2b1hs4x2y8fib6hn7v0afv4c7bjnfk4bhpi4cqd7"))))
(base32 "0bvp9xhzlh4d6q5jlvz4nciald75g9v0vahzax47q9xgajnbibzk"))))
(build-system cmake-build-system)
(arguments
`(#:tests? #f ; no tests

160
gnu/packages/geo.scm
View file

@ -65,6 +65,7 @@
#:use-module (gnu packages bison)
#:use-module (gnu packages boost)
#:use-module (gnu packages build-tools)
#:use-module (gnu packages c)
#:use-module (gnu packages check)
#:use-module (gnu packages cmake)
#:use-module (gnu packages compression)
@ -79,6 +80,7 @@
#:use-module (gnu packages flex)
#:use-module (gnu packages fonts)
#:use-module (gnu packages fontutils)
#:use-module (gnu packages gcc)
#:use-module (gnu packages gettext)
#:use-module (gnu packages gl)
#:use-module (gnu packages glib)
@ -128,25 +130,94 @@
#:use-module (gnu packages xml)
#:use-module (gnu packages xorg))
(define-public libaec
(package
(name "libaec")
(version "1.0.6")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://gitlab.dkrz.de/k202009/libaec")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "14myrmmiz9z6wgxqywf3a63cq514vrzsd6z4zvpwigvawlk30iip"))))
(build-system cmake-build-system)
(home-page "https://gitlab.dkrz.de/k202009/libaec")
(synopsis "Adaptive Entropy Coding library")
(description "Libaec provides fast lossless compression of 1 up to 32 bit
wide signed or unsigned integers (samples). The library achieves best results
for low entropy data as often encountered in space imaging instrument data or
numerical model output from weather or climate simulations. While floating
point representations are not directly supported, they can also be efficiently
coded by grouping exponents and mantissa.")
(license license:bsd-2)))
(define-public eccodes
(package
(name "eccodes")
(version "2.27.0")
(source
(origin
(method url-fetch)
(uri (string-append
"https://confluence.ecmwf.int/download/attachments/45757960/"
"eccodes-" version "-Source.tar.gz"))
(sha256
(base32 "16cw4v2d0kjq6gq04paqny0sh5jymn70w449mig7m5h3spzv7rgd"))))
(build-system cmake-build-system)
(arguments
`(#:configure-flags '("-DENABLE_MEMFS=ON" "-DENABLE_PNG=ON")
#:validate-runpath? #f))
(inputs
(list jasper libaec libjpeg-turbo libpng netcdf openjpeg))
(native-inputs
(list gfortran perl pkg-config python))
(home-page "https://confluence.ecmwf.int/display/ECC")
(synopsis "Library for handling the GRIB, BUFR and GTS file formats")
(description "ecCodes is a package developed by @acronym{ECMWF, European
Centre for Medium-Range Weather Forecasts} which provides an application
programming interface and a set of tools for decoding and encoding messages in
the @acronym{WMO, World Meteorological Organization} FM-92 GRIB, WMO FM-94
BUFR and WMO GTS abbreviated header formats.")
(license license:asl2.0)))
(define-public cdo
(package
(name "cdo")
(version "2.0.5")
(source (origin
(method url-fetch)
(uri (string-append
"https://code.mpimet.mpg.de/attachments/download/26823/cdo-"
version ".tar.gz"))
(sha256
(base32
"1khdbd5cmnn7qm6hcqg4md5wbq14fs6brrns8b3g18diqgqvpvpd"))))
(version "2.1.0")
(source
(origin
(method url-fetch)
(uri (string-append
"https://code.mpimet.mpg.de/attachments/download/27481/cdo-"
version ".tar.gz"))
(sha256
(base32 "1k18llghpf3jnjn0xcnhmbg7arb1fiy854qqn9m5c1abjin38wdq"))))
(build-system gnu-build-system)
(arguments
(list #:configure-flags
#~(list (string-append "--with-netcdf="
#$(this-package-input "netcdf")))))
#~(list (string-append "--with-curl="
#$(this-package-input "curl"))
(string-append "--with-eccodes="
#$(this-package-input "eccodes"))
(string-append "--with-fftw3="
#$(this-package-input "fftw"))
(string-append "--with-hdf5="
#$(this-package-input "hdf5"))
(string-append "--with-netcdf="
#$(this-package-input "netcdf"))
(string-append "--with-proj="
#$(this-package-input "proj"))
(string-append "--with-udunits2="
#$(this-package-input "udunits"))
(string-append "--with-libxml2="
#$(this-package-input "libxml2")))
;; Some tests can fail on machines with many threads.
#:parallel-tests? #f))
(inputs
(list netcdf))
(list curl eccodes fftw hdf5 libxml2 netcdf proj udunits))
(native-inputs
(list pkg-config))
(home-page "https://code.mpimet.mpg.de/projects/cdo")
@ -222,7 +293,7 @@ OpenStreetMap written in C using eXpat, Cairo and GLib.")
(define-public geos
(package
(name "geos")
(version "3.11.0")
(version "3.11.1")
(source (origin
(method url-fetch)
(uri (string-append "http://download.osgeo.org/geos/geos-"
@ -230,7 +301,7 @@ OpenStreetMap written in C using eXpat, Cairo and GLib.")
".tar.bz2"))
(sha256
(base32
"12l59pxawyizmc4wn20dvjn7aifqwkim4ysmc78h91mayjmqravr"))))
"1qhbirv1rbznv99ha0pa0zybvcsn0dsz2xfc65vr8bgrm77v63kd"))))
(build-system cmake-build-system)
(arguments `(#:phases
(modify-phases %standard-phases
@ -338,6 +409,7 @@ and driving.")
(method url-fetch)
(uri (string-append "http://download.osgeo.org/geotiff/libgeotiff/libgeotiff-"
version ".tar.gz"))
(patches (search-patches "libgeotiff-fix-tests-with-proj-9.1.1.patch"))
(sha256
(base32 "1mjmgv48x51ppax5dnb6lq7z600czxll53bx6jbzqwd4m93i7aq5"))
(modules '((guix build utils)))
@ -528,7 +600,7 @@ fully fledged Spatial SQL capabilities.")
(define-public proj
(package
(name "proj")
(version "9.1.0")
(version "9.1.1")
(source
(origin
(method url-fetch)
@ -536,7 +608,7 @@ fully fledged Spatial SQL capabilities.")
version ".tar.gz"))
(sha256
(base32
"0593vd9sac0c98j1f4rammd90d4xnhygbr6d49i8il6ajjdj7cl1"))))
"0fbd1vj4cj19kwh03vdn0a4hr0xaacvi876yyyw5xfsj1q0x8g00"))))
(build-system cmake-build-system)
(native-inputs (list googletest pkg-config))
(propagated-inputs (list curl libtiff sqlite)) ;required by proj.pc
@ -630,14 +702,14 @@ projections.")
(define-public python-pyproj
(package
(name "python-pyproj")
(version "3.3.1")
(version "3.4.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pyproj" version))
(sha256
(base32
"1gjg63irs44djyqbp9gg7s02d0y5i9cd1a83phyzp5fcj56y3n5k"))))
"0czbfl5dd7jckbwvinfwiwdb99sxj796gfn3a9zqbsdc4xcl8257"))))
(build-system python-build-system)
(arguments
`(#:phases
@ -974,7 +1046,7 @@ development.")
(define-public gdal
(package
(name "gdal")
(version "3.5.1")
(version "3.6.1")
(source (origin
(method url-fetch)
(uri (string-append
@ -982,7 +1054,7 @@ development.")
version ".tar.gz"))
(sha256
(base32
"1l93q7xf6qx9ck5axfkf3ygmvclxkvrjd8x00ckn7j0d0750ci3w"))
"1qckwnygszxkkq40bf87s3m1sab6jj9jyakdvskh0qf7dq8zjarf"))
(modules '((guix build utils)))
(snippet
`(begin
@ -1012,19 +1084,27 @@ development.")
json-c
libgeotiff
libjpeg-turbo
libjxl
libpng
libtiff
libwebp
lz4
netcdf
openssl
openjpeg
pcre2
postgresql ; libpq
proj
qhull
sqlite
zlib))
swig
zlib
zstd))
(native-inputs
(list pkg-config))
(list pkg-config
python))
(propagated-inputs
(list python-numpy))
(home-page "https://gdal.org/")
(synopsis "Raster and vector geospatial data format library")
(description "GDAL is a translator library for raster and vector geospatial
@ -1053,25 +1133,6 @@ utilities for data translation and processing.")
;; frmts/mrf/libLERC
license:asl2.0))))
(define-public python-gdal
(package (inherit gdal)
(name "python-gdal")
(build-system python-build-system)
(arguments
'(#:tests? #f ; no tests
#:phases
(modify-phases %standard-phases
(add-before 'build 'chdir
(lambda _
(chdir "swig/python")
#t)))))
(native-inputs '())
(propagated-inputs
(list python-numpy))
(inputs
(list gdal))
(synopsis "GDAL (Geospatial Data Abstraction Library) python bindings")))
(define-public python-pyshp
(package
(name "python-pyshp")
@ -1106,13 +1167,13 @@ utilities for data translation and processing.")
(package
(name "python-cartopy")
;; This is a post-release fix that adds build_ext to setup.py.
(version "0.20.3")
(version "0.21.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Cartopy" version))
(sha256
(base32 "01lhnkhw22jp6hnrs5qvgkq4fqcni2sx7ydiyv8w8xxx5wpglq0d"))))
(base32 "0hnfs75dcnz12ximah5xn9566r8zz189lxikmj4lrs9jl4l3l7ff"))))
(build-system python-build-system)
(arguments
`(#:phases
@ -1135,13 +1196,12 @@ utilities for data translation and processing.")
python-scipy
python-shapely))
(inputs
(list geos
;; cartopy's setup.py looks for the proj executable.
;; Not sure if it actually makes use of it since it
;; probably uses proj only through pyproj.
proj))
(list geos))
(native-inputs
(list python-cython python-flufl-lock python-pytest))
(list python-cython
python-flufl-lock
python-pytest
python-pytest-mpl))
(home-page "https://scitools.org.uk/cartopy/docs/latest/")
(synopsis "Cartographic library for visualisation")
(description
@ -2480,6 +2540,7 @@ growing set of geoscientific methods.")
"ProcessingQgisAlgorithmsTestPt2"
"ProcessingQgisAlgorithmsTestPt3"
"ProcessingQgisAlgorithmsTestPt4"
"ProcessingGdalAlgorithmsRasterTest"
"ProcessingGdalAlgorithmsVectorTest"
"ProcessingGrass7AlgorithmsImageryTest"
"ProcessingGrass7AlgorithmsRasterTestPt1"
@ -2597,7 +2658,6 @@ growing set of geoscientific methods.")
python-chardet
python-dateutil
python-future
python-gdal
python-jinja2
python-numpy
python-owslib

14
gnu/packages/gnome-xyz.scm
View file

@ -361,16 +361,16 @@ copy, move, delete, or edit your files.")
(define-public gnome-shell-extension-unite-shell
(package
(name "gnome-shell-extension-unite-shell")
(version "65")
(version "69")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/hardpixel/unite-shell")
(commit "127edac6396b89cdedec003bdff38820e6a0f91f")))
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1lzhf7hlvzg62nxjfpv265315qibcjz5dv08dzpfckf2dx68nab4"))))
"10yh6ylyp43ykcza180iak08wfypay3raqf3p0vrj9ngm98qzq70"))))
(build-system copy-build-system)
(native-inputs (list `(,glib "bin") gettext-minimal))
(inputs (list xprop))
@ -934,7 +934,7 @@ copies you now want to paste.")
(define-public gnome-shell-extension-vertical-overview
(package
(name "gnome-shell-extension-vertical-overview")
(version "9")
(version "10")
(source
(origin
(method git-fetch)
@ -943,7 +943,7 @@ copies you now want to paste.")
(commit (string-append "v" version))))
(sha256
(base32
"0pkby00rjipj04z68d6i3rr7mzm01dckf2vl3iz6yvbl39602icl"))
"1sqkbg93qqrq47wyfnh2flg7dpsmv5c2pmkx8kgqhnbl7j2kgi0l"))
(file-name (git-file-name name version))
(snippet
'(begin (delete-file "schemas/gschemas.compiled")))))
@ -1015,7 +1015,7 @@ position when the mouse is moved rapidly.")
(define-public gnome-shell-extension-burn-my-windows
(package
(name "gnome-shell-extension-burn-my-windows")
(version "21")
(version "22")
(source
(origin
(method git-fetch)
@ -1024,7 +1024,7 @@ position when the mouse is moved rapidly.")
(commit (string-append "v" version))))
(sha256
(base32
"07ckfl47pq83nhb77v230zfxlz3imga3s8nn3sr9cq4zxvbkj2r4"))
"185xrf330d9bflmk0l61cnzlylnppb2v4yz6v6ygkk4zpwyil8np"))
(file-name (git-file-name name version))))
(build-system copy-build-system)
(arguments

44
gnu/packages/gnome.scm
View file

@ -766,8 +766,7 @@ of known objects without needing a central registrar.")
(with-directory-excursion "doc/libzeitgeist"
(substitute* "zeitgeist-gtkdoc-index.sgml"
(("http://www.oasis-open.org/docbook/xml/4.3/")
(string-append (assoc-ref inputs "docbook-xml")
"/xml/dtd/docbook/"))))))
(search-input-directory inputs "/xml/dtd/docbook/"))))))
(add-after 'patch-docbook-xml 'disable-failing-tests
(lambda _
(substitute* "test/direct/Makefile.am"
@ -781,25 +780,25 @@ of known objects without needing a central registrar.")
;; To honor `autoreconf -vif` by build-system.
(delete-file "autogen.sh"))))))
(native-inputs
`(("autoconf" ,autoconf)
("automake" ,automake)
("docbook-xml" ,docbook-xml-4.3)
("gettext" ,gettext-minimal)
("gobject-introspection" ,gobject-introspection)
("gtk-doc" ,gtk-doc/stable)
("libtool" ,libtool)
("pkg-config" ,pkg-config)
("vala" ,vala)
("xorg-server-for-tests" ,xorg-server-for-tests)))
(list autoconf
automake
docbook-xml-4.3
gettext-minimal
gobject-introspection
gtk-doc/stable
libtool
pkg-config
vala
xorg-server-for-tests))
(inputs
`(("dee-icu" ,dee)
("gtk+" ,gtk+)
("json-glib" ,json-glib)
("sqlite" ,sqlite)
("telepathy-glib" ,telepathy-glib)
("python" ,python-wrapper)
("python-rdflib" ,python-rdflib)
("xapian-config" ,xapian)))
(list dee
gtk+
json-glib
sqlite
telepathy-glib
python-wrapper
python-rdflib
xapian))
(propagated-inputs
(list glib))
(synopsis "Desktop Activity Logging")
@ -889,6 +888,7 @@ tomorrow, the rest of the week and for special occasions.")
(build-system meson-build-system)
(arguments
(list
#:disallowed-references (list (this-package-native-input "git-minimal"))
#:glib-or-gtk? #t
#:configure-flags
#~(list "-Ddogtail=false" ; Not available
@ -909,7 +909,7 @@ tomorrow, the rest of the week and for special occasions.")
(list dbus
desktop-file-utils
gettext-minimal
git-minimal
git-minimal/fixed
`(,glib "bin")
gobject-introspection
gsettings-desktop-schemas
@ -9724,7 +9724,7 @@ endpoint and it understands SPARQL.")
"--no-suite" "slow")))))))
(native-inputs
(list dbus
intltool
gettext-minimal
`(,glib "bin")
docbook-xsl
docbook-xml

2
gnu/packages/gnunet.scm
View file

@ -100,7 +100,7 @@
`(("exiv2" ,exiv2)
("bzip2" ,bzip2)
("flac" ,flac)
("ffmpeg" ,ffmpeg)
("ffmpeg" ,ffmpeg-4)
("file" ,file) ;libmagic, for the MIME plug-in
("glib" ,glib)
("giflib" ,giflib)

4
gnu/packages/gnupg.scm
View file

@ -257,14 +257,14 @@ specifications are building blocks of S/MIME and TLS.")
(define libksba/fixed
(package
(inherit libksba)
(version "1.6.2")
(version "1.6.3")
(source
(origin
(method url-fetch)
(uri (string-append
"mirror://gnupg/libksba/libksba-" version ".tar.bz2"))
(sha256
(base32 "0wf9j9hlzvgn0vz6zg3fvcmpdr62v8bz1kzsvzdbs4lqqp51rq7w"))))))
(base32 "0p6y82j9y6n0l7scjgqhz3as9w13jiqjfx9n2jzynw89nf6wcwiz"))))))
(define-public npth
(package

20
gnu/packages/gnuzilla.scm
View file

@ -477,8 +477,8 @@ in C/C++.")
;; XXXX: Workaround 'snippet' limitations.
(define computed-origin-method (@@ (guix packages) computed-origin-method))
(define %icecat-version "102.5.0-guix0-preview1")
(define %icecat-build-id "20221115000000") ;must be of the form YYYYMMDDhhmmss
(define %icecat-version "102.6.0-guix0-preview1")
(define %icecat-build-id "20221213000000") ;must be of the form YYYYMMDDhhmmss
;; 'icecat-source' is a "computed" origin that generates an IceCat tarball
;; from the corresponding upstream Firefox ESR tarball, using the 'makeicecat'
@ -500,11 +500,11 @@ in C/C++.")
"firefox-" upstream-firefox-version ".source.tar.xz"))
(sha256
(base32
"1n2pq165fxmvgcr5mv3hhaid2vn7lh3jg03lf13kz4c5295x8z81"))))
"1zhggzrk7lgip8jm37idh22qks76kmjy4yqy2qi63mvnv2j58cfj"))))
(upstream-icecat-base-version "102.5.0") ; maybe older than base-version
(upstream-icecat-base-version "102.6.0") ; maybe older than base-version
;;(gnuzilla-commit (string-append "v" upstream-icecat-base-version))
(gnuzilla-commit "a8848cb35e4e47a344d40596f72d82d57bf5a6f1")
(gnuzilla-commit "b6260130b9808f550bdb35061af2d7962109a181")
(gnuzilla-source
(origin
(method git-fetch)
@ -516,7 +516,7 @@ in C/C++.")
(string-take gnuzilla-commit 8)))
(sha256
(base32
"0d0brzi7wmg70kvi9p3g24cyya17bvg2djgjn64g14hpnalg8icw"))))
"19v443w43jbcl9m5kl52nfai7hs4j07nf2ad9ggca7b2b0cz89b4"))))
;; 'search-patch' returns either a valid file name or #f, so wrap it
;; in 'assume-valid-file-name' to avoid 'local-file' warnings.
@ -1097,8 +1097,8 @@ standards of the IceCat project.")
(cpe-name . "firefox_esr")
(cpe-version . ,(first (string-split version #\-)))))))
(define %icedove-build-id "20221201000000") ;must be of the form YYYYMMDDhhmmss
(define %icedove-version "102.5.1")
(define %icedove-build-id "20221213000000") ;must be of the form YYYYMMDDhhmmss
(define %icedove-version "102.6.0")
;; Provides the "comm" folder which is inserted into the icecat source.
;; Avoids the duplication of Icecat's source tarball.
@ -1107,11 +1107,11 @@ standards of the IceCat project.")
(method hg-fetch)
(uri (hg-reference
(url "https://hg.mozilla.org/releases/comm-esr102")
(changeset "bbf216e50e6a8cb4362b2b77feeb8ca4a1d78914")))
(changeset "d46a947ae837300f19cc45c75d473c7b1cf4ebb3")))
(file-name (string-append "thunderbird-" %icedove-version "-checkout"))
(sha256
(base32
"06fhdzpl72mihm97g2i76knbny1jj261isl2jy8085wdmriv2f8z"))))
"0klr6i2sbaiv2gc8q1cxrz87zd5cskdwa9qacp3dhfb8x17qwb41"))))
(define-public icedove
(package

4
gnu/packages/graph.scm
View file

@ -67,7 +67,7 @@
(define-public plfit
(package
(name "plfit")
(version "0.9.3")
(version "0.9.4")
(source (origin
(method git-fetch)
(uri (git-reference
@ -76,7 +76,7 @@
(file-name (git-file-name name version))
(sha256
(base32
"03x5jbvg8vwr92682swy58ljxrhqwmga1xzd0cpfbfmda41gm2fb"))))
"042b60cnsz5wy27sz026xs0mnn9p58j46crgs78skncgkvzqyyc6"))))
(build-system cmake-build-system)
(arguments
'(#:configure-flags (list "-DBUILD_SHARED_LIBS=ON")))

10
gnu/packages/graphics.scm
View file

@ -570,7 +570,7 @@ and export to various formats including the format used by Magicavoxel.")
(define-public assimp
(package
(name "assimp")
(version "5.2.2")
(version "5.2.5")
(source (origin
(method git-fetch)
(uri (git-reference
@ -579,7 +579,7 @@ and export to various formats including the format used by Magicavoxel.")
(file-name (git-file-name name version))
(sha256
(base32
"1kjifakjnpm89410pw27wq21fn975gfq46kn9zs3h8bryldvvlgk"))))
"0j0pd279n6xyy95x782ha8j75kbx0ck7vs5wv3krhbyfim9bw64l"))))
(build-system cmake-build-system)
(inputs
(list zlib))
@ -957,7 +957,7 @@ other vector formats such as:
(define-public alembic
(package
(name "alembic")
(version "1.8.3")
(version "1.8.4")
(source
(origin
(method git-fetch)
@ -966,7 +966,7 @@ other vector formats such as:
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "0glfx3cm7r8zn3cn7j4x4ch1ab6igfis0i2lcy23jc56q87r8yj2"))))
(base32 "04cvzr87zqx55si4j3dqiidbmfx92ja3mc1dj0v6ddvl0cwj3m7i"))))
(build-system cmake-build-system)
(arguments
`(#:configure-flags (list "-DUSE_HDF5=ON")))
@ -1308,7 +1308,7 @@ visual effects work for film.")
("jasper" ,jasper)
("librsvg" ,librsvg)
("libxrandr" ,libxrandr)
("ffmpeg" ,ffmpeg)
("ffmpeg" ,ffmpeg-4)
("mesa" ,mesa)))
(synopsis "High-performance real-time graphics toolkit")
(description

23
gnu/packages/graphviz.scm
View file

@ -2,7 +2,7 @@
;;; Copyright © 2013, 2015, 2021 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2015, 2020 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016 Theodoros Foradis <theodoros@foradis.org>
;;; Copyright © 2017, 2018, 2019 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2017, 2018, 2019, 2022 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2017 Gábor Boskovits <boskovits@gmail.com>
;;; Copyright © 2018 Mathieu Lirzin <mthl@gnu.org>
@ -32,6 +32,7 @@
(define-module (gnu packages graphviz)
#:use-module (guix packages)
#:use-module (guix build-system gnu)
#:use-module (guix build-system pyproject)
#:use-module (guix build-system python)
#:use-module (guix download)
#:use-module (guix git-download)
@ -180,27 +181,25 @@ interfaces for other technical domains.")
(define-public python-graphviz
(package
(name "python-graphviz")
(version "0.13.2")
(version "0.20.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "graphviz" version ".zip"))
(sha256
(base32
"009alrilzx0v7kl41khbq7k6k8b8pxyvbsi1b1ai933f6kpbxb30"))))
(build-system python-build-system)
"1y1b956r01kg7qarkkrivhn71q64k0gbq6bcybd4gfd3v95g2n4c"))))
(build-system pyproject-build-system)
(arguments
'(#:phases (modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests #:allow-other-keys)
(if tests
(invoke "pytest" "-vv")
(format #t "test suite not run~%"))
#t)))))
(list
#:phases
'(modify-phases %standard-phases
(add-before 'check 'prepare-chec
;; Needed for fontconfig cache directories
(lambda _ (setenv "HOME" (getcwd)))))))
(native-inputs
(list unzip
;; For tests.
graphviz
python-mock
python-pytest
python-pytest-cov
python-pytest-mock))

11
gnu/packages/gstreamer.scm
View file

@ -734,6 +734,17 @@ model to base your own plug-in on, here it is.")
(home-page "https://gstreamer.freedesktop.org/")
(license license:lgpl2.0+)))
(define-public gst-plugins-good-qt
(package
(inherit gst-plugins-good)
(name "gst-plugins-good-qt")
(inputs
(modify-inputs (package-inputs gst-plugins-good)
(prepend qtbase-5
qtdeclarative-5
qtwayland-5
qtx11extras)))))
(define-public gst-plugins-bad
(package
(name "gst-plugins-bad")

165
gnu/packages/guile-xyz.scm
View file

@ -337,6 +337,72 @@ to UNIX pipes (@code{|}), Clojure's threading macros (@code{->} and
@code{->>}).")
(license license:gpl3+))))
(define-public guile-pubstrate
(let ((commit "b11b7df5e7ffefa45c5859b868d8125c4d939418")
(revision "1"))
(package
(name "guile-pubstrate")
(version (git-version "0.1.dev" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://gitlab.com/dustyweb/pubstrate")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1qk45b3hjhzzq3dim699jrbmlc7ryr4s1fiz99ljz16rag2rr5p4"))))
(build-system gnu-build-system)
(arguments
(list
#:make-flags
'(list "GUILE_AUTO_COMPILE=0")
#:phases
'(modify-phases %standard-phases
(add-after 'unpack 'fix-build-system
(lambda _
(substitute* "configure.ac"
(("GUILE_PROGS" m)
(string-append m "
guilemoduledir=\"${datarootdir}/guile/site/${GUILE_EFFECTIVE_VERSION}\"
AC_SUBST([guilemoduledir])
AC_SUBST([GUILE_EFFECTIVE_VERSION])
")))
;; The user.scm line is doubled
(substitute* "Makefile.am"
((".*pubstrate/webapp/user.scm.*") "")
((".*pubstrate/webapp/app.scm.*" m)
(string-append m "pubstrate/webapp/user.scm \\\n"))
(("/ccache") "/site-ccache"))))
(add-after 'unpack 'fix-srfi64-tests
(lambda _
(substitute* (find-files "tests/" "test-.*\\.scm$")
(("\\(test-exit\\)") "")
(("\\(test-end.*" m)
(string-append "(test-exit)" m))))))))
(native-inputs
(list autoconf
automake
pkg-config
texinfo))
(inputs
(list guile-3.0
libgcrypt))
(propagated-inputs
(list gnutls
guile-8sync-for-pubstrate
guile-gcrypt
guile-gdbm-ffi
guile-irregex
guile-lib
guile-sjson
guile-webutils))
(home-page "https://gitlab.com/dustyweb/pubstrate/")
(synopsis "ActivityStreams and ActivityPub implementation in Guile")
(description "This package provides an implementation of ActivityStreams
and ActivityPub in Guile. It includes a full (currently demo) web server.")
(license license:gpl3+))))
(define-public guile-f-scm
(package
(name "guile-f-scm")
@ -564,6 +630,44 @@ library for GNU Guile based on the actor model.")
(properties '((upstream-name . "8sync")))
(license license:lgpl3+))))
(define guile-8sync-for-pubstrate
(let ((commit "7972787723d08a491379b63e6e5dc1cc6a3fac87")
(revision "0"))
(package
(inherit guile-8sync)
(name "guile-8sync-for-pubstrate")
(version (git-version "0.4.2" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(commit commit)
(url "https://git.savannah.gnu.org/git/8sync.git")))
(sha256
(base32
"0m3k3cizi89frnw58dws3g4jcssck6jf1ahpadxxg3ncclqzad8r"))
(file-name (git-file-name name version))
(modules '((guix build utils)))
(snippet
'(substitute* "Makefile.am"
(("2.2") "3.0")))))
(build-system gnu-build-system)
(arguments
(list
#:make-flags
'(list "GUILE_AUTO_COMPILE=0")
#:phases
'(modify-phases %standard-phases
;; See commit ee371103855e5bfe8aae3debe442a24c6353e172
(add-after 'unpack 'fix-srfi64-tests
(lambda _
(substitute* '("tests/test-actors.scm"
"tests/test-rmeta-slot.scm")
(("\\(test-exit\\)") "")
(("\\(test-end.*" m)
(string-append "(test-exit)" m))))))))
(native-inputs (list autoconf automake guile-3.0 pkg-config texinfo))
(propagated-inputs (list guile-fibers)))))
(define-public guile-daemon
(package
(name "guile-daemon")
@ -1177,6 +1281,36 @@ non-mutating insert, delete, and search operations, with support for
convenient nested tree operations.")
(license license:gpl3+)))
(define-public guile-aws
(let ((commit "f32bea12333e1054b97ab50e58a72636edabb5b7")
(revision "1"))
(package
(name "guile-aws")
(version (git-version "0.1.0" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://git.elephly.net/software/guile-aws.git")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"0z2mrjw1dry14vjqsh9xi199bavlmy6cajshnv015n7p5my0cx9z"))))
(build-system gnu-build-system)
(native-inputs
(list autoconf automake pkg-config))
(inputs
(list guile-3.0))
(propagated-inputs
(list guile-json-4 guile-gcrypt))
(home-page "https://git.elephly.net/software/guile-aws.git")
(synopsis "Scheme DSL for the AWS APIs")
(description
"This package provides a DSL for a number of @dfn{Amazon Web
Services} (AWS) APIs, including EFS, EC2, Route53, and more. Guile AWS uses
the Guile compiler tower to generate the DSL from AWS JSON specifications.")
(license license:gpl3+))))
(define-public guile-simple-zmq
(let ((commit "ff0b39aec9312517fb48681564e261bd000aaf63")
(revision "10"))
@ -3592,7 +3726,7 @@ debugging code.")
(define-public guile-png
(package
(name "guile-png")
(version "0.2.0")
(version "0.3.0")
(source (origin
(method git-fetch)
(uri (git-reference
@ -3601,10 +3735,21 @@ debugging code.")
(file-name (string-append name "-" version "-checkout"))
(sha256
(base32
"1nk81z2cf9fsyppq5ly0yjw7yvdk5qraf71in7ayzdkngphhfgfx"))))
"1lv2cjzgrr0yshqng96l6bnn8pjmljv8qcn4w3wldh97ns7qigds"))))
(build-system gnu-build-system)
(arguments
`(#:make-flags '("GUILE_AUTO_COMPILE=0"))) ;to prevent guild warnings
`(#:make-flags '("GUILE_AUTO_COMPILE=0") ;to prevent guild warnings
#:phases
(modify-phases %standard-phases
;; Guile-PNG tries to log parser messages to the syslog which is not
;; available during the build.
(add-after 'unpack 'fix-tests
(lambda* (#:key inputs outputs #:allow-other-keys)
(substitute* "tests/graphics.scm"
((" \\(png graphics\\)\\)")
(string-append " (png graphics)\n"
" (png fsm context))\n"
"(log-clear-handlers!)"))))))))
(native-inputs (list autoconf automake pkg-config texinfo))
(inputs (list bash-minimal guile-3.0 guile-lib guile-zlib))
(propagated-inputs (list guile-smc))
@ -4076,8 +4221,8 @@ gnome-keyring, and many more.")
(license license:expat)))
(define-public guile-webutils
(let ((commit "8541904f761066dc9c27b1153e9a838be9a55299")
(revision "0"))
(let ((commit "d309d65a85247e4f3cea63a17defd1e6d35d821f")
(revision "1"))
(package
(name "guile-webutils")
(version (git-version "0.1" revision commit))
@ -4089,15 +4234,7 @@ gnome-keyring, and many more.")
(file-name (git-file-name name version))
(sha256
(base32
"1s9n3hbxd7lfpdi0x8wr0cfvlsf6g62ird9gbspxdrp5p05rbi64"))
(modules '((guix build utils)))
(snippet
'(begin
;; Allow builds with Guile 3.0.
(substitute* "configure.ac"
(("2\\.2 2\\.0")
"3.0 2.2 2.0"))
#t))))
"1a3bblk5zaldkkxn0a94s544drqm0w2i5fsjpghagd64m149blf0"))))
(build-system gnu-build-system)
(native-inputs
(list autoconf automake pkg-config texinfo))

15
gnu/packages/hardware.scm
View file

@ -14,6 +14,7 @@
;;; Copyright © 2022 Marius Bakke <marius@gnu.org>
;;; Copyright © 2022 Marcel Kupiec <formbi@protonmail.com>
;;; Copyright © 2022 Maxim Cournoyer <maxim.cournoyer@gmail.com>
;;; Copyright © 2022 Efraim Flashner <efraim@flashner.co.il>
;;;
;;; This file is part of GNU Guix.
;;;
@ -134,7 +135,7 @@ sets, and tools to deal with register databases.")
(define-public hw-probe
(package
(name "hw-probe")
(version "1.6.4")
(version "1.6.5")
(source
(origin
(method git-fetch)
@ -144,7 +145,7 @@ sets, and tools to deal with register databases.")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "028wnhrbn10lfxwmcpzdbz67ygldimv7z1k1bm64ggclykvg5aim"))))
(base32 "1sbp0scdi54zwgvb1s3ki3cw8xnxaxzm5cicq2nn3a2b6n1d4ljs"))))
(build-system perl-build-system)
(arguments
(list
@ -263,6 +264,7 @@ sets, and tools to deal with register databases.")
ddcutil
dmidecode
dpkg
edac-utils
edid-decode
efibootmgr
efivar
@ -1132,7 +1134,14 @@ supported by the Linux kernel.")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32 "0zwrkqfxd671iy69v3q0844gfdpm1yk51i9qh2rqc969bd8glxga"))))
(base32 "0zwrkqfxd671iy69v3q0844gfdpm1yk51i9qh2rqc969bd8glxga"))
(snippet
#~(begin
;; https://github.com/rockchip-linux/rkdeveloptool/pull/57
(use-modules (guix build utils))
(substitute* "main.cpp"
(("snprintf\\(buffer, sizeof\\(buffer\\), \"\\%s\", chip)")
"memccpy(buffer, chip, '\\0', sizeof(buffer))"))))))
(build-system gnu-build-system)
(native-inputs
(list autoconf automake pkg-config))

4
gnu/packages/haskell-apps.scm
View file

@ -304,14 +304,14 @@ to @code{cabal repl}).")
(define-public git-annex
(package
(name "git-annex")
(version "10.20221103")
(version "10.20221212")
(source
(origin
(method url-fetch)
(uri (string-append "https://hackage.haskell.org/package/"
"git-annex/git-annex-" version ".tar.gz"))
(sha256
(base32 "0fwg74ldw2paq9dr052hqjz2x219zkkramvm8jskpnnnch9c6jgm"))))
(base32 "0afnl2w29w4j0229rsla93dzkmhcjlp8dv76sr861n186ywv8rzg"))))
(build-system haskell-build-system)
(arguments
`(#:configure-flags

76
gnu/packages/ibus.scm
View file

@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2015, 2016, 2017, 2018, 2019, 2020, 2021 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2015 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2016 Chris Marusich <cmmarusich@gmail.com>
;;; Copyright © 2017, 2018 Efraim Flashner <efraim@flashner.co.il>
@ -36,6 +36,7 @@
#:use-module (guix build-system cmake)
#:use-module (guix build-system gnu)
#:use-module (guix build-system glib-or-gtk)
#:use-module (guix build-system meson)
#:use-module (guix build-system python)
#:use-module (guix utils)
#:use-module (gnu packages)
@ -54,6 +55,7 @@
#:use-module (gnu packages gettext)
#:use-module (gnu packages glib)
#:use-module (gnu packages gnome)
#:use-module (gnu packages gstreamer)
#:use-module (gnu packages gtk)
#:use-module (gnu packages iso-codes)
#:use-module (gnu packages logging)
@ -63,11 +65,13 @@
#:use-module (gnu packages python-xyz)
#:use-module (gnu packages python-web)
#:use-module (gnu packages serialization)
#:use-module (gnu packages speech)
#:use-module (gnu packages sqlite)
#:use-module (gnu packages textutils)
#:use-module (gnu packages unicode)
#:use-module (gnu packages xorg)
#:use-module (gnu packages xdisorg)
#:use-module (gnu packages xml)
#:use-module (srfi srfi-1))
(define-public ibus-minimal
@ -847,6 +851,76 @@ hanja dictionary and small hangul character classification.")
"ibus-hangul is a Korean input method engine for IBus.")
(license gpl2+)))
(define-public ibus-speech-to-text
(package
(name "ibus-speech-to-text")
(version "0.4.0")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/PhilippeRo/IBus-Speech-To-Text")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"00p7jfv815dblg20hahch6151rdbxhkdhfj51i0yvvmg3irvf7nm"))))
(build-system meson-build-system)
(arguments
(list
#:glib-or-gtk? #true
#:phases
'(modify-phases %standard-phases
(add-after 'unpack 'skip-update-desktop-database
(lambda* (#:key inputs #:allow-other-keys)
(substitute* "meson.build"
(("update_desktop_database: true")
"update_desktop_database: false"))))
(add-after 'install 'wrap-with-additional-paths
(lambda* (#:key inputs outputs #:allow-other-keys)
;; Make sure 'ibus-{setup,engine}-stt' find the gst-vosk plugin
;; and run with the correct GUIX_PYTHONPATH and GI_TYPELIB_PATH.
(let ((out (assoc-ref outputs "out")))
(for-each (lambda (prog)
(wrap-program prog
`("GST_PLUGIN_PATH" ":" prefix
(,(string-append (assoc-ref inputs "gst-vosk")
"/lib/gstreamer-1.0")
,(getenv "GST_PLUGIN_SYSTEM_PATH")))
`("GUIX_PYTHONPATH" ":" prefix
(,(getenv "GUIX_PYTHONPATH")
,(string-append (assoc-ref inputs "ibus")
"/lib/girepository-1.0")
,(string-append (assoc-ref outputs "out")
"/share/ibus-stt")))
`("GI_TYPELIB_PATH" ":" prefix
(,(string-append (assoc-ref inputs "ibus")
"/lib/girepository-1.0")
,(string-append (assoc-ref outputs "out")
"/share/ibus-stt")))))
(list (string-append out "/libexec/ibus-engine-stt")
(string-append out "/libexec/ibus-setup-stt")))))))))
(inputs
(list desktop-file-utils
(list glib "bin")
gobject-introspection
gst-vosk
gstreamer
gtk
ibus
libadwaita
python
python-babel
python-pygobject))
(native-inputs
(list gettext-minimal libxml2 pkg-config))
(home-page "https://github.com/PhilippeRo/IBus-Speech-To-Text")
(synopsis "Speech to text IBus engine using VOSK")
(description "This Input Method uses VOSK for voice recognition and allows
to dictate text in several languages in any application that supports IBus.
One of the main adavantages is that VOSK performs voice recognition locally
and does not rely on an online service.")
(license gpl3+)))
(define-public ibus-theme-tools
(package
(name "ibus-theme-tools")

4
gnu/packages/image-processing.scm
View file

@ -620,7 +620,7 @@ integrates with various databases on GUI toolkits such as Qt and Tk.")
(sha256
(base32 "0ga0l4ranp1834gxgp487ll1amvmssa02l2nk5ja5w0rx4d8hh26"))))))
(inputs
(list ffmpeg
(list ffmpeg-4
gtk+
gtkglext
hdf5
@ -925,7 +925,7 @@ recalculates.")
double-conversion
eigen
expat
ffmpeg
ffmpeg-4
freetype
gdal
gl2ps

17
gnu/packages/irc.scm
View file

@ -387,22 +387,23 @@ highlighted.
(define-public ii
(package
(name "ii")
(version "1.9")
(version "2.0")
(source (origin
(method url-fetch)
(uri (string-append "http://dl.suckless.org/tools/"
name "-" version ".tar.gz"))
(sha256
(base32
"05wcaszm9hap5gqf58bciqm3ad1kfgp976fs3fsn3ll3nliv6345"))))
"0ns2wpzkk7qzhv7addgr0w5as0m7jwag5nxai2dr61wc436syrsg"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; no tests
#:make-flags (list (string-append "PREFIX=" %output)
,(string-append "CC=" (cc-for-target)))
#:phases
(modify-phases %standard-phases
(delete 'configure)))) ; no configure
(list #:tests? #f ; no tests
#:make-flags
#~(list (string-append "PREFIX=" #$output)
(string-append "CC=" #$(cc-for-target)))
#:phases
#~(modify-phases %standard-phases
(delete 'configure)))) ; no configure script
(home-page "https://tools.suckless.org/ii/")
(synopsis "FIFO and file system based IRC client")
(description

13
gnu/packages/jami.scm
View file

@ -69,7 +69,7 @@
#:use-module (guix packages)
#:use-module (guix utils))
(define %jami-version "20221031.1308.130cc26")
(define %jami-version "20221220.0956.79e1207")
(define %jami-sources
;; Return an origin object of the tarball release sources archive of the
@ -93,16 +93,9 @@
"plugins"))))
(sha256
(base32
"0hbsjjs61n7268lyjnjb9lzfpkkd65fmz76l1bg4awlz1f3cyywm"))
"0g5709rmb9944s0ij9g4pm1b871f5z0s5nawvm10z14wx3y1np8m"))
(patches (search-patches "jami-disable-integration-tests.patch"
"jami-libjami-headers-search.patch"
"jami-fix-unit-tests-build.patch"
"jami-fix-qml-imports.patch"
"jami-no-webengine.patch"
"jami-sipaccount-segfault.patch"
"jami-sip-contacts.patch"
"jami-sip-unregister.patch"
"jami-xcb-link.patch"))))
"jami-libjami-headers-search.patch"))))
;; Jami maintains a set of patches for some key dependencies (currently
;; pjproject and ffmpeg) of Jami that haven't yet been integrated upstream.

42
gnu/packages/java.scm
View file

@ -1761,18 +1761,18 @@ new Date();"))
(define-public openjdk11
(package
(name "openjdk")
(version "11.0.15")
(version "11.0.17")
(source (origin
(method url-fetch)
(uri (string-append "https://openjdk-sources.osci.io/openjdk11/openjdk-"
version "-ga.tar.xz"))
(file-name (string-append name "-" version ".tar.bz2"))
(file-name (string-append name "-" version ".tar.xz"))
(sha256
(base32
"0di91nnms2iq1svgq72r5y17am17r4vh2lq43k0bkcwpc84d6nd8"))
"1prvqy0ysz0999wrhsrbz6vrknpqfihl9l74l16ph93g89dqi5ia"))
(modules '((guix build utils)))
(snippet
'(for-each delete-file (find-files "." ".*.(bin|exe|jar)$")))))
'(for-each delete-file (find-files "." "\\.(bin|exe|jar)$")))))
(build-system gnu-build-system)
(outputs '("out" "jdk" "doc"))
(arguments
@ -1851,8 +1851,7 @@ new Date();"))
(format (current-error-port)
"warning: failed to substitute: ~a~%"
file))))
(find-files "."
"\\.c$|\\.h$")))))
(find-files "." "\\.c$|\\.h$")))))
(add-before 'build 'write-source-revision-file
(lambda _
(with-output-to-file ".src-rev"
@ -1879,7 +1878,7 @@ new Date();"))
,@make-flags))))
(replace 'install
(lambda _
(let ((images (car (find-files "build" ".*-server-release"
(let ((images (car (find-files "build" "-server-release"
#:directories? #t))))
(copy-recursively (string-append images "/images/jdk")
#$output:jdk)
@ -1913,7 +1912,7 @@ new Date();"))
(invoke "unzip" archive))
(delete-file archive)
(with-directory-excursion dir
(let ((char-data-files (find-files "." "CharacterData.*")))
(let ((char-data-files (find-files "." "CharacterData")))
(for-each (lambda (file)
(substitute* file
(((string-append "This file was generated "
@ -1924,7 +1923,7 @@ new Date();"))
"file"))))
char-data-files)))
(with-directory-excursion dir
(let ((files (find-files "." ".*" #:directories? #t)))
(let ((files (find-files "." #:directories? #t)))
(apply invoke "zip" "-0" "-X" archive files))))))
(add-after 'strip-character-data-timestamps 'remove-extraneous-files
(lambda* (#:key outputs #:allow-other-keys)
@ -1949,7 +1948,7 @@ new Date();"))
(invoke "unzip" archive))
(delete-file archive)
(for-each (compose repack-archive canonicalize-path)
(find-files dir "(ct.sym|\\.jar)$"))
(find-files dir "(ct\\.sym|\\.jar)$"))
(let ((reset-file-timestamp
(lambda (file)
(let ((s (lstat file)))
@ -1959,7 +1958,7 @@ new Date();"))
(for-each reset-file-timestamp
(find-files dir #:directories? #t)))
(with-directory-excursion dir
(let ((files (find-files "." ".*" #:directories? #t)))
(let ((files (find-files "." #:directories? #t)))
(apply invoke "zip" "-0" "-X" archive files)))))))
(for-each repack-archive
(find-files #$output:doc "\\.zip$"))
@ -2019,6 +2018,7 @@ new Date();"))
libxtst))
(native-inputs
(list autoconf
bash ; not bash-minimal, needs ulimit
openjdk10
`(,openjdk10 "jdk")
gnu-make-4.2
@ -2100,8 +2100,8 @@ blacklisted.certs.pem"
"#! java BlacklistedCertsConverter SHA-256\n"))))))))))
(define-public openjdk13
(make-openjdk openjdk12 "13.0.7"
"0wrrr0d7lz1v8qqm752mn4gz5l2vpl2kmx4ac3ysvk4mljc924hp"))
(make-openjdk openjdk12 "13.0.13"
"0pxf4dlig61k0pg7amg4mi919hzam7nzwckry01avgq1wj8ambji"))
(define-public openjdk14
(make-openjdk
@ -2119,8 +2119,8 @@ blacklisted.certs.pem"
(define-public openjdk15
(make-openjdk
openjdk14 "15.0.3"
"168cr08nywp0q3vyj8njkhsmmnyd8rz9r58hk4xhzdzc6bdfkl1i"
openjdk14 "15.0.9"
"1k3x06fv89l84ysjsyw8s89q8blghq85m6xjzv373x6297ln8n7a"
(source (origin
(inherit (package-source base))
(modules '())
@ -2137,13 +2137,13 @@ blacklisted.certs.pem"
(append `(,openjdk14 "jdk"))))))
(define-public openjdk16
(make-openjdk openjdk15 "16.0.1"
"1ggddsbsar4dj2fycfqqqagqil7prhb30afvq6933rz7pa9apm2f"))
(make-openjdk openjdk15 "16.0.2"
"0587px2qbz07g3xi4a3ya6m630p72dvkxcn0bj1813pxnwvcgigz"))
(define-public openjdk17
(make-openjdk
openjdk16 "17.0.3"
"0slmd6ww947gxpp4yr2wmr5z975bg86qh7zqfp2radf2q77ql65b"
openjdk16 "17.0.5"
"1asnysg6kxdkrmb88y6qihdr12ljsyxv0mg6hlcs7cwxgsdlqkfs"
(arguments
(substitute-keyword-arguments (package-arguments openjdk16)
((#:phases phases)
@ -2155,8 +2155,8 @@ blacklisted.certs.pem"
(("^#!.*") "#! java BlockedCertsConverter SHA-256\n"))))))))))
(define-public openjdk18
(make-openjdk openjdk17 "18"
"1bv6bdhkmwvn10l0xy8yi9xibds640hs5zsvx0jp7wrxa3qw4qy8"))
(make-openjdk openjdk17 "18.0.2"
"1yimfdkwpinhg5cf1mcrzk9xvjwnray3cx762kypb9jcwbranjwx"))
;;; Convenience alias to point to the latest version of OpenJDK.
(define-public openjdk openjdk18)

2
gnu/packages/julia-jll.scm
View file

@ -254,7 +254,7 @@ build tree Yggdrasil.")
;; There's a Julia file for each platform, override them all
(find-files "src/wrappers/" "\\.jl$")))))))
(inputs
(list ffmpeg))
(list ffmpeg-4))
(propagated-inputs
(list julia-jllwrappers
julia-bzip2-jll

717
gnu/packages/julia-xyz.scm
View file

File diff suppressed because it is too large Load diff

2
gnu/packages/kde-multimedia.scm
View file

@ -334,7 +334,7 @@ This package is part of the KDE multimedia module.")
(native-inputs
(list docbook-xsl
extra-cmake-modules
ffmpeg
ffmpeg-4
kdoctools
libxslt
python-wrapper

2
gnu/packages/kde-utils.scm
View file

@ -423,7 +423,7 @@ Kate's features include:
(home-page "https://invent.kde.org/utilities/kdebugsettings")
(synopsis "Choose which QLoggingCategory are displayed")
(description
"This package allows to select which QLoggingCategory are displayed.")
"This package selects which QLoggingCategory are displayed.")
(license license:lgpl2.0+)))
(define-public kbackup

2
gnu/packages/kodi.scm
View file

@ -399,7 +399,7 @@ alternatives. In compilers, this can reduce the cascade of secondary errors.")
("dcadec" ,dcadec)
("dbus" ,dbus)
("eudev" ,eudev)
("ffmpeg" ,ffmpeg)
("ffmpeg" ,ffmpeg-4)
("flac" ,flac)
("flatbuffers" ,flatbuffers)
("fmt" ,fmt-7)

84
gnu/packages/lighting.scm
View file

@ -19,6 +19,7 @@
(define-module (gnu packages lighting)
#:use-module (guix build-system gnu)
#:use-module (guix gexp)
#:use-module (guix git-download)
#:use-module ((guix licenses) #:prefix license:)
#:use-module (guix packages)
@ -36,52 +37,49 @@
#:use-module (gnu packages protobuf))
(define-public ola
;; Use a commit that allows building with libmicrohttpd 0.9.71.
;; https://github.com/OpenLightingProject/ola/pull/1651
(let ((commit "5d882936436240b312b3836afd199587beaca840")
(revision "0"))
(package
(name "ola")
(version (git-version "0.10.7" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/OpenLightingProject/ola")
(commit commit)))
(sha256
(base32 "1bhl3gvmvmnyrygfj13cibf2xirm285m8abjkaxq22hrqbsvab2m"))
(file-name (git-file-name name version))))
(build-system gnu-build-system)
(native-inputs
(list bison
cppunit
flex
pkg-config
;; For git repository bootstrapping.
autoconf
automake
libtool))
(inputs
`(("libftdi" ,libftdi)
("libmicrohttpd" ,libmicrohttpd)
("libusb" ,libusb)
("libuuid" ,util-linux "lib")
("zlib" ,zlib)))
(propagated-inputs
(list protobuf)) ; for pkg-config --libs libola
(arguments
`( ;; G++ >= 4.8 macro expansion tracking requires lots of memory, causing
;; build to fail on low memory systems. We disable that with the
;; following configure flags.
#:configure-flags (list "CXXFLAGS=-ftrack-macro-expansion=0")))
(synopsis "Framework for controlling entertainment lighting equipment")
(description "The Open Lighting Architecture is a framework for lighting
(package
(name "ola")
(version "0.10.8")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/OpenLightingProject/ola")
(commit version)))
(sha256
(base32 "17dwmjdw87hv314gv5b1rmh5jglz8a0rzw7wj26xn74xw2jvxa6l"))
(file-name (git-file-name name version))))
(build-system gnu-build-system)
(native-inputs
(list bison
cppunit
flex
pkg-config
;; For git repository bootstrapping.
autoconf
automake
libtool))
(inputs
(list libftdi
libmicrohttpd
libusb
`(,util-linux "lib")
zlib))
(propagated-inputs
(list protobuf)) ; for pkg-config --libs libola
(arguments
(list
;; G++ >= 4.8 macro expansion tracking requires lots of memory, causing
;; build to fail on low memory systems. We disable that with the
;; following configure flags.
#:configure-flags #~(list "CXXFLAGS=-ftrack-macro-expansion=0")))
(synopsis "Framework for controlling entertainment lighting equipment")
(description "The Open Lighting Architecture is a framework for lighting
control information. It supports a range of protocols and over a dozen USB
devices. It can run as a standalone service, which is useful for converting
signals between protocols, or alternatively using the OLA API, it can be used
as the backend for lighting control software. OLA runs on many different
platforms including ARM, which makes it a perfect fit for low cost Ethernet to
DMX gateways.")
(home-page "https://www.openlighting.org/ola")
(license license:lgpl2.1+))))
(home-page "https://www.openlighting.org/ola")
(license license:lgpl2.1+)))

2
gnu/packages/linphone.scm
View file

@ -645,7 +645,7 @@ API. It also comprises a simple HTTP/HTTPS client implementation.")
("bcg729" ,bcg729)
("bcmatroska2" ,bcmatroska2)
("bctoolbox" ,bctoolbox)
("ffmpeg" ,ffmpeg)
("ffmpeg" ,ffmpeg-4)
("glew" ,glew)
("glu" ,glu)
("glx" ,mesa-utils)

418
gnu/packages/linux.scm
View file

@ -130,6 +130,7 @@
#:use-module (gnu packages libunwind)
#:use-module (gnu packages libusb)
#:use-module (gnu packages llvm)
#:use-module (gnu packages lsof)
#:use-module (gnu packages lua)
#:use-module (gnu packages man)
#:use-module (gnu packages maths)
@ -143,12 +144,14 @@
#:use-module (gnu packages perl)
#:use-module (gnu packages pciutils)
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages polkit)
#:use-module (gnu packages popt)
#:use-module (gnu packages pulseaudio)
#:use-module (gnu packages python)
#:use-module (gnu packages python-xyz)
#:use-module (gnu packages readline)
#:use-module (gnu packages rrdtool)
#:use-module (gnu packages rsync)
#:use-module (gnu packages samba)
#:use-module (gnu packages sdl)
#:use-module (gnu packages serialization)
@ -477,7 +480,7 @@ corresponding UPSTREAM-SOURCE (an origin), using the given DEBLOB-SCRIPTS."
;; The current "stable" kernels. That is, the most recently released major
;; versions that are still supported upstream.
(define-public linux-libre-6.0-version "6.0.12")
(define-public linux-libre-6.0-version "6.0.15")
(define-public linux-libre-6.0-gnu-revision "gnu")
(define deblob-scripts-6.0
(linux-libre-deblob-scripts
@ -487,7 +490,7 @@ corresponding UPSTREAM-SOURCE (an origin), using the given DEBLOB-SCRIPTS."
(base32 "16g2bin3xay30zfss1vlb7pwcss5giaxaksp4v1gk05wn51wjrqr")))
(define-public linux-libre-6.0-pristine-source
(let ((version linux-libre-6.0-version)
(hash (base32 "00ag63lnxw2gijw3b6v29lhrlv480m12954q5zh4jawlz3nk1dw9")))
(hash (base32 "08389890gq4b9vkvrb22lzkr4blkn3a5ma074ns19gl89wyyp16l")))
(make-linux-libre-source version
(%upstream-linux-source version hash)
deblob-scripts-6.0)))
@ -495,7 +498,7 @@ corresponding UPSTREAM-SOURCE (an origin), using the given DEBLOB-SCRIPTS."
;; The "longterm" kernels — the older releases with long-term upstream support.
;; Here are the support timelines:
;; <https://www.kernel.org/category/releases.html>
(define-public linux-libre-5.15-version "5.15.82")
(define-public linux-libre-5.15-version "5.15.85")
(define-public linux-libre-5.15-gnu-revision "gnu")
(define deblob-scripts-5.15
(linux-libre-deblob-scripts
@ -505,12 +508,12 @@ corresponding UPSTREAM-SOURCE (an origin), using the given DEBLOB-SCRIPTS."
(base32 "1m73pgx8v047xb2gck2g7j7khniis8c9akn9vhzgsdfglrf8p6fj")))
(define-public linux-libre-5.15-pristine-source
(let ((version linux-libre-5.15-version)
(hash (base32 "0r8v7113favmch2x6br7jk6idihza99l9qyd7ik99i5sg6xzdvpw")))
(hash (base32 "024qhjh9mgfnanr1qd8002n6a4wpn98lajli12a0m3n9z8lsw2rc")))
(make-linux-libre-source version
(%upstream-linux-source version hash)
deblob-scripts-5.15)))
(define-public linux-libre-5.10-version "5.10.158")
(define-public linux-libre-5.10-version "5.10.161")
(define-public linux-libre-5.10-gnu-revision "gnu1")
(define deblob-scripts-5.10
(linux-libre-deblob-scripts
@ -520,12 +523,12 @@ corresponding UPSTREAM-SOURCE (an origin), using the given DEBLOB-SCRIPTS."
(base32 "0a96g4pjdgwvxn2wpz6rfc8nwdlkw138r9pp66kvfrrn08i313ii")))
(define-public linux-libre-5.10-pristine-source
(let ((version linux-libre-5.10-version)
(hash (base32 "1rq7lyp41fydybs53rcdjhiy271arh95xch16s5s3jhhanxj82hy")))
(hash (base32 "0ya04njrxr4d37zkxvivmn5f0bdvcb504pyp9ahwz8nqpk8gdaks")))
(make-linux-libre-source version
(%upstream-linux-source version hash)
deblob-scripts-5.10)))
(define-public linux-libre-5.4-version "5.4.226")
(define-public linux-libre-5.4-version "5.4.228")
(define-public linux-libre-5.4-gnu-revision "gnu1")
(define deblob-scripts-5.4
(linux-libre-deblob-scripts
@ -535,12 +538,12 @@ corresponding UPSTREAM-SOURCE (an origin), using the given DEBLOB-SCRIPTS."
(base32 "1bgblfkcnrabnr9hpdl07qgps57h6bq4v5pjrxs798vq43db66va")))
(define-public linux-libre-5.4-pristine-source
(let ((version linux-libre-5.4-version)
(hash (base32 "0i4s1hl5q0ax55z7m5krzyw1zj9v03q8jcfksknb6qrg3lm5a7qc")))
(hash (base32 "0935dq7zbpf0fkppl3q96a2gh1zrmq01h1nivzgmdhjlmhn3n9c0")))
(make-linux-libre-source version
(%upstream-linux-source version hash)
deblob-scripts-5.4)))
(define-public linux-libre-4.19-version "4.19.268")
(define-public linux-libre-4.19-version "4.19.269")
(define-public linux-libre-4.19-gnu-revision "gnu1")
(define deblob-scripts-4.19
(linux-libre-deblob-scripts
@ -550,12 +553,12 @@ corresponding UPSTREAM-SOURCE (an origin), using the given DEBLOB-SCRIPTS."
(base32 "0g1yhzxm3ixfll6n630v7lddcyvf888sg114nimh0lkvzd180s99")))
(define-public linux-libre-4.19-pristine-source
(let ((version linux-libre-4.19-version)
(hash (base32 "0kr0di4gr6p57c8h6ybcli01kazq235npbh6qrpx0hpmqcdcx6r1")))
(hash (base32 "02mjb16xxfj984vibpxvhjl84y5yg0jgzjccjdxnn8db4k9aa2vf")))
(make-linux-libre-source version
(%upstream-linux-source version hash)
deblob-scripts-4.19)))
(define-public linux-libre-4.14-version "4.14.301")
(define-public linux-libre-4.14-version "4.14.302")
(define-public linux-libre-4.14-gnu-revision "gnu1")
(define deblob-scripts-4.14
(linux-libre-deblob-scripts
@ -565,12 +568,12 @@ corresponding UPSTREAM-SOURCE (an origin), using the given DEBLOB-SCRIPTS."
(base32 "00i91lx938nqlgy63hiricqd0fnbbf26vgya9c5lb7m1f4x324im")))
(define-public linux-libre-4.14-pristine-source
(let ((version linux-libre-4.14-version)
(hash (base32 "16zrpfadsnznpl37crbq5g1hz1ch0zfp2a75yzlqy2fs0f7fxlmc")))
(hash (base32 "102c9h0byr9v4bxzkdh7mnw1grm47ji6lf6l1gjlwah7f46j6ap3")))
(make-linux-libre-source version
(%upstream-linux-source version hash)
deblob-scripts-4.14)))
(define-public linux-libre-4.9-version "4.9.335")
(define-public linux-libre-4.9-version "4.9.336")
(define-public linux-libre-4.9-gnu-revision "gnu1")
(define deblob-scripts-4.9
(linux-libre-deblob-scripts
@ -580,7 +583,7 @@ corresponding UPSTREAM-SOURCE (an origin), using the given DEBLOB-SCRIPTS."
(base32 "0bib3641dbcqdkx3anna3caxnsg3nw9cnmhcklq0s93g3m57041h")))
(define-public linux-libre-4.9-pristine-source
(let ((version linux-libre-4.9-version)
(hash (base32 "0agb1avdqxbmb0z751f5c4d6s7k9zb6dq04z82gx0v4zzrhxhkzd")))
(hash (base32 "032hgfvn7za2v49jjc3pdzx0cfglrmjkbl2d3pz857yc0q9y2v8z")))
(make-linux-libre-source version
(%upstream-linux-source version hash)
deblob-scripts-4.9)))
@ -1082,43 +1085,6 @@ Linux kernel. It has been modified to remove all non-free binary blobs.")
(define-public linux-libre-source linux-libre-6.0-source)
(define-public linux-libre linux-libre-6.0)
(define-public linux-libre-documentation
(package
(inherit linux-libre)
(name "linux-libre-documentation")
(arguments
(list
#:tests? #f
#:phases #~(modify-phases %standard-phases
(delete 'configure)
(replace 'build
(lambda _
(substitute* "Documentation/Makefile"
;; Remove problematic environment check script.
((".*scripts/sphinx-pre-install.*") ""))
(invoke "make" "infodocs")))
(replace 'install
(lambda _
(let* ((info-dir (string-append #$output "/share/info"))
(info (string-append info-dir
"/TheLinuxKernel.info.gz")))
(with-directory-excursion "Documentation/output"
(invoke "make" "-C" "texinfo" "install-info"
(string-append "infodir=" info-dir)))
;; Create a symlink, for convenience.
(symlink info (string-append info-dir
"/linux.info.gz"))))))))
(native-inputs
(list graphviz
perl
python
python-sphinx
texinfo
which))
(synopsis "Documentation for the kernel Linux-Libre")
(description "This package provides the documentation for the kernel
Linux-Libre, as an Info manual. To consult it, run @samp{info linux}.")))
(define-public linux-libre-5.15
(make-linux-libre* linux-libre-5.15-version
linux-libre-5.15-gnu-revision
@ -1900,6 +1866,47 @@ login password to @code{gpg-agent}. This can be useful if you are using a
GnuPG-based password manager like @code{pass}.")
(license license:gpl3+)))
;;;
;;; Kernel documentation
;;;
(define-public linux-libre-documentation
(package
(inherit linux-libre)
(name "linux-libre-documentation")
(arguments
(list
#:tests? #f
#:phases #~(modify-phases %standard-phases
(delete 'configure)
(replace 'build
(lambda _
(substitute* "Documentation/Makefile"
;; Remove problematic environment check script.
((".*scripts/sphinx-pre-install.*") ""))
(invoke "make" "infodocs")))
(replace 'install
(lambda _
(let* ((info-dir (string-append #$output "/share/info"))
(info (string-append info-dir
"/TheLinuxKernel.info.gz")))
(with-directory-excursion "Documentation/output"
(invoke "make" "-C" "texinfo" "install-info"
(string-append "infodir=" info-dir)))
;; Create a symlink, for convenience.
(symlink info (string-append info-dir
"/linux.info.gz"))))))))
(native-inputs
(list graphviz
perl
python
python-sphinx
texinfo
which))
(synopsis "Documentation for the kernel Linux-Libre")
(description "This package provides the documentation for the kernel
Linux-Libre, as an Info manual. To consult it, run @samp{info linux}.")))
;;;
;;; Miscellaneous.
@ -1933,7 +1940,7 @@ It provides the commands @code{powercap-info} and @code{powercap-set}.")
(define-public powerstat
(package
(name "powerstat")
(version "0.02.27")
(version "0.02.28")
(source
(origin
(method git-fetch)
@ -1942,7 +1949,7 @@ It provides the commands @code{powercap-info} and @code{powercap-set}.")
(commit (string-append "V" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1ik5yv2bhz2hvyga4h1m28rf0xpi20zpqm4swhvskyf1g6qf381z"))))
(base32 "1wydjxmb6qf7rqarpl8rblg4biq3r2kfcx7p3pzvsr0w1xwdiisd"))))
(build-system gnu-build-system)
(arguments
`(#:make-flags
@ -2868,6 +2875,56 @@ IPv6 packet filter.
Both commands are targeted at system administrators.")
(license license:gpl2+)))
(define-public bolt
(package
(name "bolt")
(version "0.9.4")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://gitlab.freedesktop.org/bolt/bolt")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"0w66shv7ra8yrhr0byifahbq25wi8qfsm3rifz0j31l7cmnys3js"))))
(build-system meson-build-system)
(arguments
(list #:configure-flags '(list "--localstatedir=/var")
#:glib-or-gtk? #t ;To wrap binaries and/or compile schemas
#:phases #~(modify-phases %standard-phases
(add-after 'unpack 'replace-directories
(lambda* (#:key outputs #:allow-other-keys)
(substitute* "meson.build"
(("udev.get_pkgconfig_variable..udevdir..")
(string-append "'"
#$output "/lib/udev'")))
(substitute* "scripts/meson-install.sh"
(("mkdir.*")
""))))
(add-before 'install 'no-polkit-magic
(lambda* (#:key outputs #:allow-other-keys)
(setenv "PKEXEC_UID" "something"))))))
(native-inputs (list pkg-config
`(,glib "bin") python asciidoc umockdev))
(inputs (list eudev dbus polkit))
(synopsis "Thunderbolt 3 device manager")
(description
"This package provides @command{boltd}, a userspace daemon
for Thunderbolt devices, and @command{boltctl}, a command-line utility for
managing those devices.
The daemon @command{boltd} exposes devices via D-Bus to clients. It also
stores a database of previously authorized devices and will, depending on the
policy set for the individual devices, automatically authorize newly connected
devices without user interaction.
The command-line utility @command{boltctl} manages Thunderbolt devices via
@command{boltd}. It can list devices, monitor changes, and initiate
authorization of devices.")
(home-page "https://gitlab.freedesktop.org/bolt/bolt")
(license license:gpl2+)))
(define-public jitterentropy-rngd
(package
(name "jitterentropy-rngd")
@ -3973,7 +4030,7 @@ from the module-init-tools project.")
(define-public earlyoom
(package
(name "earlyoom")
(version "1.6.2")
(version "1.7")
(source (origin
(method git-fetch)
(uri (git-reference
@ -3982,7 +4039,7 @@ from the module-init-tools project.")
(file-name (git-file-name name version))
(sha256
(base32
"16iyn51xlrsbshc7p5xl2338yyfzknaqc538sa7mamgccqwgyvvq"))))
"1xqrs6wz59ks76hdgfd4vaj010kbvllilgam2xxyn0g56kai71zi"))))
(build-system gnu-build-system)
(arguments
(list
@ -5932,36 +5989,25 @@ uncompressed size will not match the number given by @command{tar} or
obviously it can be shared with files outside our set).")
(license license:gpl2+)))
(define-public f2fs-tools-1.7
(define-public f2fs-tools
(package
(name "f2fs-tools")
(version "1.7.0")
(version "1.15.0")
(source (origin
(method url-fetch)
(uri (string-append
"https://git.kernel.org/cgit/linux/kernel/git/jaegeuk"
"/f2fs-tools.git/snapshot/f2fs-tools-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://git.kernel.org/pub/scm/linux/kernel\
/git/jaegeuk/f2fs-tools.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1m6bn1ibq0p53m0n97il91xqgjgn2pzlz74lb5bfzassx7159m1k"))))
"1ffws8pbpzp9730v0wy5xjas698lnbd2p7wpr2gl4mx45rsay9a5"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags '("CFLAGS=-fcommon")
#:phases
(modify-phases %standard-phases
(add-after 'install 'install-headers
(lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(out-include (string-append out "/include")))
(install-file "include/f2fs_fs.h" out-include)
(install-file "mkfs/f2fs_format_utils.h" out-include)
#t))))))
(native-inputs
(list autoconf automake libtool pkg-config))
(inputs
`(("libuuid" ,util-linux "lib")
("libselinux" ,libselinux)))
(list `(,util-linux "lib"))) ;for libuuid
(home-page "https://f2fs.wiki.kernel.org/")
(synopsis "Userland tools for f2fs")
(description
@ -5972,21 +6018,33 @@ disks and SD cards. This package provides the userland utilities.")
;; GPL2/LGPL2.1, everything else is GPL2 only. See 'COPYING'.
(license (list license:gpl2 license:lgpl2.1))))
(define-public f2fs-tools
(define-public f2fs-tools-1.7
(package
(inherit f2fs-tools-1.7)
(inherit f2fs-tools)
(name "f2fs-tools")
(version "1.14.0")
(version "1.7.0")
(source (origin
(method url-fetch)
(uri (string-append
"https://git.kernel.org/cgit/linux/kernel/git/jaegeuk"
"/f2fs-tools.git/snapshot/f2fs-tools-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url (git-reference-url
(origin-uri (package-source f2fs-tools))))
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1lab1446c78xsjwhpki7s85z4171m8p9279c8yhm4882wba674k1"))))
"0wpzklw8smnngng0dm25jdmi7v5zfhpz02dksyxpz0a7kzzvnqqm"))))
(inputs
`(("libuuid" ,util-linux "lib")))))
(list `(,util-linux "lib") libselinux))
(arguments
'(#:configure-flags '("CFLAGS=-fcommon")
#:phases
(modify-phases %standard-phases
(add-after 'install 'install-headers
(lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(out-include (string-append out "/include")))
(install-file "include/f2fs_fs.h" out-include)
(install-file "mkfs/f2fs_format_utils.h" out-include)))))))))
(define-public f2fs-tools/static
(static-package
@ -6004,18 +6062,9 @@ disks and SD cards. This package provides the userland utilities.")
"-I" libuuid "/include/blkid")
(string-append "libblkid_LIBS=-L" libuuid-static "/lib -lblkid")))
#:disallowed-references (,util-linux)
#:make-flags '("LDFLAGS=-all-static")
#:phases
(modify-phases %standard-phases ; TODO: f2fs phases.
(add-after 'unpack 'make-static
(lambda _
(define (append-to-file name body)
(let ((file (open-file name "a")))
(display body file)
(close-port file)))
(append-to-file "mkfs/Makefile.am" "\nmkfs_f2fs_LDFLAGS = -all-static\n")
(append-to-file "fsck/Makefile.am" "\nfsck_f2fs_LDFLAGS = -all-static\n")
(append-to-file "tools/Makefile.am" "\nf2fscrypt_LDFLAGS = -all-static -luuid\n")
#t))
(add-after 'install 'remove-store-references
(lambda* (#:key outputs #:allow-other-keys)
;; Work around bug in our util-linux.
@ -6719,12 +6768,16 @@ not as a replacement for it.")
(build-system gnu-build-system)
(arguments
`(#:configure-flags (list "--disable-pywrap")
#:modules (,@%gnu-build-system-modules
(ice-9 binary-ports)
(rnrs bytevectors)
(srfi srfi-26))
#:phases
(modify-phases %standard-phases
(add-after 'patch-source-shebangs 'patch-hardcoded-paths
(lambda* (#:key inputs outputs #:allow-other-keys)
(let ((out (assoc-ref outputs "out"))
(utils-linux (assoc-ref inputs "utils-linux"))
(util-linux (assoc-ref inputs "util-linux"))
(cryptsetup (assoc-ref inputs "cryptsetup"))
(linux-pam (assoc-ref inputs "linux-pam"))
(lvm2 (assoc-ref inputs "lvm2")))
@ -6738,9 +6791,9 @@ not as a replacement for it.")
"src/desktop/ecryptfs-mount-private.desktop.in"
"src/desktop/ecryptfs-setup-private.desktop.in")
(("/bin/mount")
(string-append utils-linux "/bin/mount"))
(string-append util-linux "/bin/mount"))
(("/bin/umount")
(string-append utils-linux "/bin/umount"))
(string-append util-linux "/bin/umount"))
(("/sbin/mount.ecryptfs_private")
(string-append out "/sbin/mount.ecryptfs_private"))
(("/sbin/umount.ecryptfs_private")
@ -6756,17 +6809,48 @@ not as a replacement for it.")
(("/sbin/unix_chkpwd")
(string-append linux-pam "/sbin/unix_chkpwd"))
(("/sbin/dmsetup")
(string-append lvm2 "/sbin/dmsetup")))))))))
(string-append lvm2 "/sbin/dmsetup"))))))
(add-after 'install 'wrap-scripts
(lambda* (#:key inputs outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(bin (string-append out "/bin"))
(add (map (lambda (bin)
(dirname (search-input-file
inputs (string-append "bin/" bin))))
;; For simplicity, we wrap all scripts the same.
(list "awk" "find" "gettext" "grep" "keyctl" "ls"
"lsof" "mount" "rsync" "sed" "which")))
(script? (lambda (file)
(call-with-input-file file
(lambda (port)
(bytevector=? (string->utf8 "#!")
(get-bytevector-n port 2)))))))
(for-each (lambda (file)
(when (script? file)
(wrap-program file
;; '= would be better than 'suffix but break
;; setuid binaries.
`("PATH" ":" suffix (,@add
,(string-append bin))))))
(find-files bin "."))))))))
(native-inputs
(list intltool perl ; for pod2man
pkg-config))
(inputs
`(("keyutils" ,keyutils)
("linux-pam" ,linux-pam)
("utils-linux" ,util-linux)
("cryptsetup" ,cryptsetup)
("lvm2" ,lvm2)
("nss" ,nss)))
(list coreutils
cryptsetup
findutils
gawk
grep
keyutils
linux-pam
lsof
lvm2
nss
rsync
sed
util-linux
which))
(home-page "https://ecryptfs.org/")
(synopsis "eCryptfs cryptographic file system utilities")
(description
@ -6904,7 +6988,7 @@ the @code{mce-inject} module loaded if it exists.")
(define-public mcelog
(package
(name "mcelog")
(version "189")
(version "190")
(source
(origin
(method git-fetch)
@ -6913,7 +6997,7 @@ the @code{mce-inject} module loaded if it exists.")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0ml12xmmmljp22a89fw23c6gmba4dngavgnisv665w67kbnv5085"))
(base32 "1466zkbxgjg8ik0gd9vwsjiwg0yg7g8ra4bw3lg3ypla2kiydy4q"))
(modules '((guix build utils)))
(snippet
`(begin
@ -6949,7 +7033,7 @@ exceeded.")
(define-public mtd-utils
(package
(name "mtd-utils")
(version "2.1.4")
(version "2.1.5")
(source (origin
(method url-fetch)
(uri (string-append
@ -6957,7 +7041,7 @@ exceeded.")
"mtd-utils-" version ".tar.bz2"))
(sha256
(base32
"168vyzpfa0n66i8lcf626b9jczjr81rqbdk7735lfb18bp8i2rrc"))))
"0ilz8hkcyvfcnqpy25kbr8fb71x9vl28wbmw56vvd68n2byjfviq"))))
(arguments
(list #:configure-flags
(if (%current-target-system) ; When cross-compiling.
@ -6968,12 +7052,12 @@ exceeded.")
(native-inputs
(list cmocka pkg-config))
(inputs
`(("acl" ,acl) ; extended attributes (xattr)
("libuuid" ,util-linux "lib")
("lzo" ,lzo)
("openssl" ,openssl) ; optional crypto support
("zlib" ,zlib)
("zstd" ,zstd "lib")))
(list acl ; extended attributes (xattr)
lzo
openssl ; optional crypto support
`(,util-linux "lib")
zlib
`(,zstd "lib")))
(build-system gnu-build-system)
(synopsis "MTD Flash Storage Utilities")
(description "This package provides utilities for testing, partitioning, etc
@ -7568,14 +7652,14 @@ re-use code and to avoid re-inventing the wheel.")
(define-public libnftnl
(package
(name "libnftnl")
(version "1.2.3")
(version "1.2.4")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://netfilter.org/libnftnl/"
"libnftnl-" version ".tar.bz2"))
(sha256
(base32 "0m82bmh8i24hwxmz7rxwxjll4904ghd2b1x1p5h8algrg6dyl5p9"))))
(base32 "0zs7c8swlirxnbhl8q1b0p8g3jrzns7fyxsrglz71zfdwhxj7zn0"))))
(build-system gnu-build-system)
(native-inputs
(list pkg-config))
@ -7651,7 +7735,7 @@ userspace queueing component and the logging subsystem.")
(define-public libnetfilter-conntrack
(package
(name "libnetfilter-conntrack")
(version "1.0.8")
(version "1.0.9")
(source
(origin
(method url-fetch)
@ -7660,8 +7744,7 @@ userspace queueing component and the logging subsystem.")
"libnetfilter_conntrack-"
version ".tar.bz2"))
(sha256
(base32
"1ky1mqgnplw2h9jf0kn0a69d94jkydhbiipng9l2hdcj13h3pl8c"))))
(base32 "1a3rnpsba64dzy97wwjrxal89wr0nf9znvag2j18nkp3kzs9vgb7"))))
(build-system gnu-build-system)
(native-inputs (list pkg-config))
(inputs (list libnfnetlink libmnl))
@ -7679,7 +7762,7 @@ conntrack-tools among many other applications.")
(define-public libnetfilter-cttimeout
(package
(name "libnetfilter-cttimeout")
(version "1.0.0")
(version "1.0.1")
(source
(origin
(method url-fetch)
@ -7687,8 +7770,7 @@ conntrack-tools among many other applications.")
"libnetfilter_cttimeout/files/"
"libnetfilter_cttimeout-" version ".tar.bz2"))
(sha256
(base32
"1fpyz1zlvcq80244knvyvy87909xjqlj02lmw8yblz2m9xsi5axf"))))
(base32 "0983cpyvxyycbnzqlrzml80pph2z51r6s7sxp06ciq8468pxln8b"))))
(build-system gnu-build-system)
(native-inputs (list pkg-config))
(inputs (list libmnl))
@ -7706,7 +7788,7 @@ by conntrack-tools.")
(define-public libnetfilter-cthelper
(package
(name "libnetfilter-cthelper")
(version "1.0.0")
(version "1.0.1")
(source
(origin
(method url-fetch)
@ -7714,8 +7796,7 @@ by conntrack-tools.")
"libnetfilter_cthelper/files/"
"libnetfilter_cthelper-" version ".tar.bz2"))
(sha256
(base32
"0gfgzkc1fjniqwk4jxds72c0lcgfhq2591hrvjrvd9nrqiqqwq87"))))
(base32 "04n95ngil5l8m8v64dfjm1dwq0wd3kf4vw1zblsrff13hxa3s1ql"))))
(build-system gnu-build-system)
(native-inputs (list pkg-config))
(inputs (list libmnl))
@ -8122,14 +8203,14 @@ available in the kernel Linux.")
(define-public cpuid
(package
(name "cpuid")
(version "20221003")
(version "20221201")
(source (origin
(method url-fetch)
(uri (string-append "http://www.etallen.com/cpuid/cpuid-"
version ".src.tar.gz"))
(sha256
(base32
"01w318kxcksfbjwjnnc9ly12g0yp4vm6xjgfl8mmi0jndg0cbi33"))))
"0vlg5zc0dayyn9bzyb25fcaxid9svrsjjza11afplrhh50wdrzh8"))))
(build-system gnu-build-system)
(arguments
(list #:make-flags
@ -8793,7 +8874,7 @@ the superuser to make device nodes.")
(define-public fakeroot
(package
(name "fakeroot")
(version "1.28")
(version "1.30.1")
(source
(origin
;; There are no tags in the repository, so take this snapshot.
@ -8802,7 +8883,7 @@ the superuser to make device nodes.")
"fakeroot/fakeroot_" version ".orig.tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32 "1hlh77b6m2cfm42lcav372mbjni5akbgs25yg4wgi1gndzihbm2n"))
(base32 "0xba5gfh7ygv6na8n1ckqd2jnpdr9q88qan385qxp85c47sb3srj"))
(modules '((guix build utils)
(ice-9 ftw)))
(snippet
@ -8864,16 +8945,8 @@ the superuser to make device nodes.")
(substitute* "test/compare-tar"
(("tar -tvf") "tar --numeric-owner -tvf")))))))
(native-inputs
`(;; For bootstrapping the package.
("autoconf" ,autoconf-2.71)
("automake" ,automake)
("libtool" ,libtool)
("gettext" ,gettext-minimal)
("po4a" ,po4a)
;; For tests.
("sharutils" ,sharutils)
("xz" ,xz)))
(list autoconf-2.71 automake gettext-minimal libtool po4a
sharutils xz)) ; for tests
(inputs
(list acl libcap util-linux sed coreutils))
(synopsis "Run commands in an environment with fake root privileges")
@ -8991,7 +9064,7 @@ types and interfaces and translates so that the X server can use them.")
(list alsa-lib
dbus
eudev
ffmpeg
ffmpeg-4
gstreamer
gst-plugins-base
libva
@ -9035,6 +9108,7 @@ of Linux application development.")
(modify-inputs (package-native-inputs pipewire)
(prepend python-docutils)))
(inputs (modify-inputs (package-inputs pipewire)
(replace "ffmpeg" ffmpeg)
(prepend avahi
bluez
jack-2
@ -9290,7 +9364,7 @@ and above.")
(define-public bpftrace
(package
(name "bpftrace")
(version "0.15.0")
(version "0.16.0")
(source
(origin
(method git-fetch)
@ -9299,7 +9373,7 @@ and above.")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "022fg0kiz0liahj82wvlxmivkwyp86shs5fwr2v4blx7lh05k9zm"))
(base32 "0v1376wfk4gy5rrjdsck6r3347nb0bgbj70998z1bkx9z95wm3ab"))
(patches (search-patches "bpftrace-disable-bfd-disasm.patch"))))
(build-system cmake-build-system)
(native-inputs
@ -9356,14 +9430,14 @@ receiving. It is dedicated to the PL011 UART of the Raspberry Pi.")
(define-public ipset
(package
(name "ipset")
(version "7.15")
(version "7.16")
(source
(origin
(method url-fetch)
(uri (string-append "https://ipset.netfilter.org/"
"ipset-" version ".tar.bz2"))
(sha256
(base32 "0l8pcaym6057hq3a4zwnk53p5y6xg1m3d3c83wn18h5nmnm4am8a"))))
(base32 "1l4nybq17gr2ick7bbb5gq46bsqiw4rxmrvi0qfkvpm1yk6xkcc7"))))
(build-system gnu-build-system)
(inputs
(list libmnl))
@ -9395,7 +9469,7 @@ then IP sets may be the proper tool for you.")
(define-public liburing
(package
(name "liburing")
(version "2.2")
(version "2.3")
(source (origin
(method git-fetch)
(uri (git-reference
@ -9404,7 +9478,7 @@ then IP sets may be the proper tool for you.")
(file-name (git-file-name name version))
(sha256
(base32
"1677zqqbd9nw9hrdaxqbd1zwy54cxfsv2z0bjipn23mrkz2xzy1k"))))
"1ngg5640adlinkal8b28x5snrbab9yr8jw1w539h39k4pqnsbpmw"))))
(build-system gnu-build-system)
(arguments
`(;; Tests are dependent on kernel version and features
@ -9468,27 +9542,37 @@ provides user-space tools for creating EROFS file systems.")
(sha256
(base32 "0r0339mg4rc12p63iiq2kwdqn1zjakyiv014i2a2l9s8v5rjik41"))))
(native-inputs (list autoconf automake libtool))
(inputs (list perl sqlite))
(inputs (list perl perl-dbd-sqlite sqlite dmidecode kmod))
(arguments
`(#:configure-flags
(list "--enable-all"
;; Don't install unused /etc/sysconfig/rasdaemon environment file.
"--with-sysconfdefdir=."
"--localstatedir=/var")
#:phases
(modify-phases %standard-phases
(add-before 'configure 'munge-autotools
(lambda _
;; For some reason upstream forces sysconfdir=/etc. This results
;; in EPERM during the install phase. Removing the offending
;; line lets sysconfdir correctly pick up DESTDIR.
(substitute* "configure.ac"
(("^test .* sysconfdir=/etc\n$") ""))
;; Upstream tries to create /var/lib/rasdaemon at install time.
;; This results in EPERM on guix. Instead, the service should
;; create this at activation time.
(substitute* "Makefile.am"
(("^\\s*\\$\\(install_sh\\) -d .*@RASSTATEDIR@.*$") "")))))))
(list
#:configure-flags
#~(list "--enable-all"
;; Don't install unused /etc/sysconfig/rasdaemon environment file.
"--with-sysconfdefdir=."
"--localstatedir=/var")
#:phases
#~(modify-phases %standard-phases
(add-before 'configure 'munge-autotools
(lambda _
;; For some reason upstream forces sysconfdir=/etc. This results
;; in EPERM during the install phase. Removing the offending
;; line lets sysconfdir correctly pick up DESTDIR.
(substitute* "configure.ac"
(("^test .* sysconfdir=/etc\n$") ""))
;; Upstream tries to create /var/lib/rasdaemon at install time.
;; This results in EPERM on guix. Instead, the service should
;; create this at activation time.
(substitute* "Makefile.am"
(("^\\s*\\$\\(install_sh\\) -d .*@RASSTATEDIR@.*$") ""))))
(add-after 'install 'fix-dmidecode-and-modprobe
(lambda _
(substitute* (string-append #$output "/sbin/ras-mc-ctl")
(("find_prog \\(\"dmidecode\"\\).*$") (format #f "~s;~%" (string-append #$dmidecode "/sbin/dmidecode")))
(("find_prog \\(\"modprobe\"\\).*$") (format #f "~s;~%" (string-append #$kmod "/bin/modprobe"))))))
(add-after 'wrap 'wrap-rasdaemon
(lambda _
(wrap-program (string-append #$output "/sbin/ras-mc-ctl")
`("PERL5LIB" ":" prefix ,(string-split (getenv "PERL5LIB") #\:))))))))
(build-system gnu-build-system)
(home-page "https://github.com/mchehab/rasdaemon")
(synopsis "Platform Reliability, Availability, and Serviceability tools")

422
gnu/packages/lisp-xyz.scm
View file

@ -104,6 +104,7 @@
#:use-module (gnu packages python)
#:use-module (gnu packages python-xyz)
#:use-module (gnu packages readline)
#:use-module (gnu packages rsync)
#:use-module (gnu packages sdl)
#:use-module (gnu packages serialization)
#:use-module (gnu packages sqlite)
@ -894,9 +895,74 @@ Features:
(define-public ecl-cl-irc
(sbcl-package->ecl-package sbcl-cl-irc))
(define-public sbcl-tripod
(let ((commit "bcea16610b4961a927e417e4413fffe686d71c83")
(define-public sbcl-coleslaw
(let ((commit "e7e68ce6020d13b14bf212890a7d8973d7af3b40")
(revision "0"))
(package
(name "sbcl-coleslaw")
(version (git-version "0.9.7" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/coleslaw-org/coleslaw")
(commit commit)))
(file-name (git-file-name "cl-coleslaw" version))
(sha256
(base32 "1w21a272q4x7nlr4kbmwwvkjvb4hpnw869byvy47vv361y7pimws"))))
(build-system asdf-build-system/sbcl)
(outputs '("out" "bin"))
(arguments
'(#:asd-systems '("coleslaw" "coleslaw-cli")
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'fix-paths
(lambda _
(substitute* "plugins/publish-gh-pages.sh"
(("^rsync\\b") (which "rsync")))
(substitute* '("plugins/rsync.lisp"
"src/coleslaw.lisp")
(("\\brun-program \"rsync\\b")
(string-append "run-program \"" (which "rsync"))))))
(add-after 'create-asdf-configuration 'build-program
(lambda* (#:key outputs #:allow-other-keys)
(build-program
(string-append (assoc-ref outputs "bin") "/bin/coleslaw")
outputs
#:dependencies '("coleslaw-cli")
#:entry-program '((apply (function coleslaw-cli::main)
arguments))
#:compress? #t))))))
(native-inputs
(list sbcl-prove))
(inputs
(list rsync
sbcl-3bmd
sbcl-alexandria
sbcl-cl-fad
sbcl-cl-ppcre
sbcl-cl-unicode
sbcl-clack
sbcl-closer-mop
sbcl-closure-template
sbcl-inferior-shell
sbcl-local-time
sbcl-trivia))
(home-page "https://github.com/coleslaw-org/coleslaw")
(synopsis "Static site generator")
(description
"Coleslaw is a static site generator written in Common Lisp.")
(license license:bsd-2))))
(define-public cl-coleslaw
(sbcl-package->cl-source-package sbcl-coleslaw))
(define-public ecl-coleslaw
(sbcl-package->ecl-package sbcl-coleslaw))
(define-public sbcl-tripod
(let ((commit "b019a27cd7eb895870f84b0eb6c3edc5d7b05928")
(revision "1"))
(package
(name "sbcl-tripod")
(version (git-version "0.0.1" revision commit))
@ -908,17 +974,30 @@ Features:
(commit commit)))
(file-name (git-file-name "cl-tripod" version))
(sha256
(base32 "07czbwzfqg8n1q4dsfmrdp2zmp90xgsg8q26hkrniyvkylq4nn1z"))))
(base32 "0y8sns6njq9x7km58vpj7gx4cia9zkcpng3d38300xk0nnk2kz8w"))))
(build-system asdf-build-system/sbcl)
(outputs '("out" "bin"))
(arguments
(list #:phases
#~(modify-phases %standard-phases
(add-after 'create-asdf-configuration 'build-program
(lambda* (#:key outputs #:allow-other-keys)
(build-program (string-append #$output:bin "/bin/tripod")
outputs
#:entry-program '((tripod:entry-point))
#:compress? #t))))))
(inputs
(list sbcl-alexandria
sbcl-cl-gopher
sbcl-cl-markdown
sbcl-clss
sbcl-hunchentoot
sbcl-phos
sbcl-plump
sbcl-trivial-mimes))
(list sbcl-alexandria
sbcl-cl-gopher
sbcl-cl-markdown
sbcl-clss
sbcl-hunchentoot
sbcl-local-time
sbcl-nactivitypub
sbcl-njson
sbcl-phos
sbcl-plump
sbcl-trivial-mimes))
(home-page "https://aartaka.me/blog/tripod")
(synopsis "Common Lisp web server aiming to ease website hosting")
(description
@ -932,7 +1011,6 @@ and Gopher website hosting.")
(define-public ecl-tripod
(sbcl-package->ecl-package sbcl-tripod))
(define-public sbcl-trivial-timeout
(let ((commit "feb869357f40f5e109570fb40abad215fb370c6c")
(revision "1"))
@ -1425,6 +1503,53 @@ within.")
(define-public cl-ubiquitous
(sbcl-package->cl-source-package sbcl-ubiquitous))
(define-public sbcl-uax-14
(let ((commit "0432162525119c401d3d705bb9bcc9580a03914f")
(revision "1"))
(package
(name "sbcl-uax-14")
(version (git-version "1.0.0" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/Shinmera/uax-14")
(commit commit)))
(file-name (git-file-name "uax-14" version))
(sha256
(base32 "1sb2s58k01yjaggaq8i7kbyfsh6mzyqbiz1vm59smxn9qqwd8apm"))))
(build-system asdf-build-system/sbcl)
(native-inputs
(list sbcl-parachute sbcl-cl-ppcre))
(inputs
(list sbcl-documentation-utils))
(arguments
`(#:asd-systems '("uax-14")))
(home-page "https://shinmera.github.io/uax-14/")
(synopsis "Unicode Standard Annex #14 for standardised line breaking")
(description
"This is an implementation of the Unicode Standards Annex
#14 (@url{http://www.unicode.org/reports/tr14/}) line breaking algorithm. It
provides a fast and convenient way to determine line breaking opportunities in
text.
Note that this algorithm does not support break opportunities that require
morphological analysis. In order to handle such cases, please consult a system
that provides this kind of capability, such as a hyphenation algorithm.
Also note that this system is completely unaware of layouting decisions. Any
kind of layouting decisions, such as which breaks to pick, how to space
between words, how to handle bidirectionality, and what to do in emergency
situations when there are no breaks on an overfull line are left up to the
user.")
(license license:zlib))))
(define-public ecl-uax-14
(sbcl-package->ecl-package sbcl-uax-14))
(define-public cl-uax-14
(sbcl-package->cl-source-package sbcl-uax-14))
(define-public sbcl-uax-15
(package
(name "sbcl-uax-15")
@ -1592,7 +1717,10 @@ reading and writing.")
`(("zpb-ttf" ,sbcl-zpb-ttf)))
(arguments
'(#:asd-systems '("cl-vectors"
"cl-paths-ttf")))
"cl-paths"
"cl-paths-ttf"
"cl-aa"
"cl-aa-misc")))
(home-page "http://projects.tuxee.net/cl-vectors/")
(synopsis "Create, transform and render anti-aliased vectorial paths")
(description
@ -10428,6 +10556,39 @@ the library does not depend on X11).
(define-public ecl-cl-colors2
(sbcl-package->ecl-package sbcl-cl-colors2))
(define-public sbcl-colored
(let ((commit "bee87efb0b047da0f071f5cf1457997ab5f93feb")
(revision "1"))
(package
(name "sbcl-colored")
(version (git-version "1.0.0" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/Shinmera/colored/")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32 "0mpg91r6yfb9xqccd4r8z3hl2qzjhdj6daswb1cinrm8ffxrvy5k"))))
(build-system asdf-build-system/sbcl)
(native-inputs
(list sbcl-parachute))
(inputs
(list sbcl-documentation-utils))
(synopsis "Colour representation, conversion, and operation for Common Lisp")
(description
"This is a library for representing and mapping colours between their
various spaces.")
(home-page "https://shinmera.github.io/colored/")
(license license:zlib))))
(define-public cl-colored
(sbcl-package->cl-source-package sbcl-colored))
(define-public ecl-colored
(sbcl-package->ecl-package sbcl-colored))
(define-public sbcl-cl-jpeg
(let ((commit "ec557038128df6895fbfb743bfe8faf8ec2534af")
(revision "1"))
@ -10678,8 +10839,8 @@ performance and correctness.")
(sbcl-package->ecl-package sbcl-png-read))
(define-public sbcl-3b-bmfont
(let ((commit "d1b5bec0de580c2d08ec947a93c56b1400f2a37a")
(revision "1"))
(let ((commit "48a38f52d282064829851c484d9e7dee0ffe9e72")
(revision "2"))
(package
(name "sbcl-3b-bmfont")
(version (git-version "0.0.1" revision commit))
@ -10691,7 +10852,7 @@ performance and correctness.")
(commit commit)))
(file-name (git-file-name "3b-bmfont" version))
(sha256
(base32 "12sgf7m0h6fqzhvkas7vmci6mprj3j3fnz778jlbqbsydln6v2yc"))))
(base32 "0v4lcrlpx60ayg0g5b10q2hjh1iaanln4ck0hm1rvjxm39gl2d86"))))
(build-system asdf-build-system/sbcl)
(arguments
`(#:asd-systems
@ -10719,6 +10880,63 @@ read/write Bit Map Font (BMF) into text, JSON and XML.")
(define-public cl-3b-bmfont
(sbcl-package->cl-source-package sbcl-3b-bmfont))
(define sbcl-3b-bmfont/shinmera
(let ((commit "58e529d24b7799d56b4b3f9c8a953b585d42c7d2")
(revision "1"))
(package (inherit sbcl-3b-bmfont)
(version (git-version "0.0.1" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/Shinmera/3b-bmfont/")
(commit commit)))
(file-name (git-file-name "3b-bmfont2" version))
(sha256
(base32 "17zby669b64rhxhk2szamzdgvispimh6ici05xa6x2vz4rvk71jq")))))))
(define-public sbcl-sdf
;; Shinmera's fork required for Alloy.
(let ((commit "e1ab3ac4ea52c0e0119b832f428c71f580b4d83b")
(revision "1"))
(package
(name "sbcl-sdf")
(version (git-version "0.0.1" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/Shinmera/sdf")
(commit commit)))
(file-name (git-file-name "sdf" version))
(sha256
(base32 "1cyq4hkgiw9mnb87ah6xw19cybfs9hfbjvg1ch2mf4cr0ism0nvn"))))
(build-system asdf-build-system/sbcl)
(inputs
(list sbcl-zpb-ttf
sbcl-cl-vectors
sbcl-opticl
sbcl-binpack
sbcl-3b-bmfont/shinmera
sbcl-pathname-utils))
(arguments
`(#:asd-systems '("sdf" "sdf/bmfont")))
(home-page "https://github.com/Shinmera/sdf")
(synopsis "Signed distance font atlas generator")
(description
"This library generates
sdf (@url{https://steamcdn-a.akamaihd.net/apps/valve/2007/SIGGRAPH2007_AlphaTestedMagnification.pdf}),
psdf and
msdf (@url{https://github.com/Chlumsky/msdfgen/files/3050967/thesis.pdf})
atlases.")
(license license:expat))))
(define-public ecl-sdf
(sbcl-package->ecl-package sbcl-sdf))
(define-public cl-sdf
(sbcl-package->cl-source-package sbcl-sdf))
(define-public sbcl-zpng
(package
(name "sbcl-zpng")
@ -16732,8 +16950,8 @@ protocol for Mastodon.")
(sbcl-package->cl-source-package sbcl-tooter))
(define-public sbcl-croatoan
(let ((commit "5d0949d57a12e7fece8828e089daa339b260da96")
(revision "5"))
(let ((commit "35c92fcc6c4458339c7e27bdf16f7fa908d95eb8")
(revision "6"))
(package
(name "sbcl-croatoan")
(version (git-version "0.0.1" revision commit))
@ -16745,7 +16963,7 @@ protocol for Mastodon.")
(commit commit)))
(file-name (git-file-name "cl-croatoan" version))
(sha256
(base32 "0qsnz10hri95al73vhpqrs7mapz2px0dbwgfn52sbi93gwk5aki9"))))
(base32 "0v1lrdjd29krjb6pr0mql9hjj5c2lv760xwpr17dbsw263vx29xz"))))
(build-system asdf-build-system/sbcl)
(arguments
'(#:phases
@ -16871,11 +17089,11 @@ dynamically.")
(sbcl-package->cl-source-package sbcl-sxql-composer))
(define-public sbcl-cl-i18n
(let ((commit "5b569f3fe4c76d600fafecac507ac4f50e4cc1d1")
(revision "1"))
(let ((commit "66b02dc2cff3ab97f924329aaf965807fe18aa20")
(revision "2"))
(package
(name "sbcl-cl-i18n")
(version (git-version "0.5.2" revision commit))
(version (git-version "0.5.3" revision commit))
(source
(origin
(method git-fetch)
@ -16884,7 +17102,7 @@ dynamically.")
(commit commit)))
(file-name (git-file-name "cl-i18n" version))
(sha256
(base32 "0kj1wfvlbi7qwq61b0rcdxa0bmb4sfsnh1bj3n5jxp24sdib73w2"))))
(base32 "06ij1wxancsym87gg63nvjh7vfzjipi1f02h4fb2ypip60vw06lc"))))
(build-system asdf-build-system/sbcl)
(inputs
(list sbcl-alexandria sbcl-babel sbcl-cl-ppcre-unicode))
@ -17456,6 +17674,38 @@ compiled foreign library collection.")
(define-public cl-conspack
(sbcl-package->cl-source-package sbcl-cl-conspack))
(define-public sbcl-binpack
(let ((commit "e67f56bb697bdeac81e28e1cca4a5d117a9cf125")
(revision "1"))
(package
(name "sbcl-binpack")
(version (git-version "0.0.1" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/lispgames/binpack")
(commit commit)))
(file-name (git-file-name "binpack" version))
(sha256
(base32 "1pcnsg60pqywd3k72m5pwimq01sm3jyvc1c3rbkij740r7grdxi1"))))
(build-system asdf-build-system/sbcl)
(native-inputs
(list sbcl-parachute))
(inputs
(list sbcl-alexandria))
(home-page "https://github.com/lispgames/binpack")
(synopsis "Common Lisp rectangle packer for sprite/texture atlases")
(description
"This library features a rectangle packer for sprite and texture atlases.")
(license license:expat))))
(define-public ecl-binpack
(sbcl-package->ecl-package sbcl-binpack))
(define-public cl-binpack
(sbcl-package->cl-source-package sbcl-binpack))
(define-public sbcl-cl-opengl
(let ((commit "e2d83e0977b7e7ac3f3d348d8ccc7ccd04e74d59")
(revision "1"))
@ -19979,9 +20229,41 @@ developing library for Common Lisp.")
(define-public cl-liballegro
(sbcl-package->cl-source-package sbcl-cl-liballegro))
(define-public sbcl-alloy
(let ((commit "e86e22c2887836ec31cd97e039f0bca5248d8f1c")
(define-public sbcl-font-discovery
(let ((commit "5101ca79151055f3ec9839aae73b8af42b884528")
(revision "1"))
(package
(name "sbcl-font-discovery")
(version (git-version "1.0.0" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/Shinmera/font-discovery")
(commit commit)))
(file-name (git-file-name "font-discovery" version))
(sha256
(base32 "1p9wkwc23rnif8vcjaj5ih1fmr5g57sidqjlz08qw6k0z4f6bia1"))))
(build-system asdf-build-system/sbcl)
(inputs
(list sbcl-cffi sbcl-documentation-utils sbcl-trivial-indent))
(home-page "https://shinmera.github.io/font-discovery/")
(synopsis "Find system font files matching a font spec")
(description
"This is a library to find system font files. It works on systems with
FontConfig on Linux, BSD. It does not have any foreign dependencies that
aren't already directly available on the system.")
(license license:zlib))))
(define-public ecl-font-discovery
(sbcl-package->ecl-package sbcl-font-discovery))
(define-public cl-font-discovery
(sbcl-package->cl-source-package sbcl-font-discovery))
(define-public sbcl-alloy
(let ((commit "ea02e4576fd92917201b3c9b63dd3cdc72045dbf")
(revision "2"))
(package
(name "sbcl-alloy")
(version (git-version "0.0.0" revision commit))
@ -19993,12 +20275,25 @@ developing library for Common Lisp.")
(commit commit)))
(file-name (git-file-name "alloy" version))
(sha256
(base32 "1jsqjr6sf86hcdvnjp4gd10qv0r7kfkr9hmda85irb5lha4q9n7w"))))
(base32 "1g8ibvlajhlbdrmny7ck55ilv1shjdpj38q380wri4mavfymjw5f"))))
(build-system asdf-build-system/sbcl)
(native-inputs
(list sbcl-alexandria sbcl-parachute))
(inputs
(list sbcl-array-utils sbcl-closer-mop sbcl-documentation-utils))
(list sbcl-array-utils sbcl-closer-mop sbcl-documentation-utils
sbcl-float-features sbcl-colored sbcl-stealth-mixin
sbcl-cl-opengl sbcl-font-discovery sbcl-uax-14 sbcl-sdf))
(arguments
;; Dismiss alloy-svg, since it is not completed:
;; https://github.com/Shirakumo/alloy/issues/24
'(#:asd-systems '("alloy"
"alloy-windowing"
"alloy-animation"
"alloy-simple"
"alloy-simple-presentations"
"alloy-opengl"
"alloy-opengl-msdf"
"alloy-opengl-png")))
(home-page "https://shirakumo.github.io/alloy/")
(synopsis
"Common Lisp user interface protocol and toolkit implementation")
@ -23039,6 +23334,50 @@ Lisp. A subsystem offers an experimental GUI Gemini client.")
(define-public ecl-phos
(sbcl-package->ecl-package sbcl-phos))
(define-public sbcl-germinal
(let ((commit "5bfb371ea57dae8985c0e1c6f184f0338487d684")
(revision "0"))
(package
(name "sbcl-germinal")
(version (git-version "1.0.0" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://git.carcosa.net/jmcbray/germinal")
(commit commit)))
(file-name (git-file-name "cl-germinal" version))
(sha256
(base32 "12jypa8m10825lp5yxfcm1fyk3r4ziwcri7ndxa0m5dz0y7hggck"))))
(build-system asdf-build-system/sbcl)
(inputs
(list sbcl-alexandria
sbcl-babel
sbcl-bordeaux-threads
sbcl-cl+ssl
sbcl-cl-fad
sbcl-cl-interpol
sbcl-cl-ppcre
sbcl-cl-str
sbcl-local-time
sbcl-osicat
sbcl-ppath
sbcl-quri
sbcl-trivial-mimes
sbcl-uax-15
sbcl-usocket))
(home-page "https://git.carcosa.net/jmcbray/germinal")
(synopsis "Gemini protocol server")
(description "Germinal is a server for the Gemini protocol, written in
Common Lisp.")
(license license:agpl3))))
(define-public cl-germinal
(sbcl-package->cl-source-package sbcl-germinal))
(define-public ecl-germinal
(sbcl-package->ecl-package sbcl-germinal))
(define-public sbcl-css-lite
(let ((commit "6ee4e6212ed56943d665df163d2a834b122e6273")
(revision "0"))
@ -26047,8 +26386,25 @@ Zombie Raptor game engine project.")
(sha256
(base32 "146mwshynhdw82m2nxrcjvf1nk0z3fn6ywcd2vqxkly5qricc53w"))))
(build-system asdf-build-system/sbcl)
(outputs '("out" "bin"))
(arguments
'(#:asd-systems '("charje.triads")))
'(#:asd-systems '("charje.triads")
#:phases
(modify-phases %standard-phases
(add-after 'create-asdf-configuration 'build-binary
(lambda* (#:key outputs #:allow-other-keys)
(setenv "HOME" (getcwd))
(invoke
"sbcl" "--eval" "(require :asdf)" "--eval"
(format
#f "~S"
`(progn
(require "charje.triads"
,(string-append (getcwd) "/charje.triads.asd"))
(asdf:make "charje.triads"))))
(install-file
(string-append (getcwd) "/triads")
(string-append (assoc-ref outputs "bin") "/bin")))))))
(inputs
(list sbcl-cl-str
sbcl-serapeum
@ -26065,7 +26421,15 @@ roman numeral given in the key.")
(sbcl-package->cl-source-package sbcl-triads))
(define-public ecl-triads
(sbcl-package->ecl-package sbcl-triads))
(let ((ecl-package (sbcl-package->ecl-package sbcl-triads)))
(package
(inherit ecl-package)
(outputs '("out"))
(arguments
(substitute-keyword-arguments (package-arguments ecl-package)
((#:phases phases)
`(modify-phases ,phases
(delete 'build-binary))))))))
(define-public sbcl-closure-template
;; There are no releases since 2015.

136
gnu/packages/machine-learning.scm
View file

@ -1552,35 +1552,39 @@ interactive learning.")
(define-public python-hyperopt
(package
(name "python-hyperopt")
(version "0.2.5")
(version "0.2.7")
(source
(origin
(method url-fetch)
(uri (pypi-uri "hyperopt" version))
(sha256
(base32 "1k4ma8ci0bxghw7g4ms944zak1pi83yv2d6bxd7fcslm1zalfq5w"))))
(build-system python-build-system)
(base32 "0jd1ghmm423kbhjvd6pxq92y5vkz25390687fcnd7fshh3jrmy0v"))))
(build-system pyproject-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(list
#:phases
'(modify-phases %standard-phases
(replace 'check
(lambda* (#:key inputs outputs tests? #:allow-other-keys)
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(add-installed-pythonpath inputs outputs)
(invoke "python" "-m" "pytest" "--ignore"
(invoke "python" "-m" "pytest"
;; Needs python-pyspark.
"hyperopt/tests/test_spark.py"
"--ignore" "hyperopt/tests/integration/test_spark.py"
;; Needs both python-scikit-learn and python-lightgbm.
"--ignore" "hyperopt/tests/test_atpe_basic.py"
"--ignore" "hyperopt/tests/unit/test_atpe_basic.py"
;; The tests below need python-lightgbm.
"-k" (string-append "not test_branin"
" and not test_distractor"
" and not test_q1lognormal"
" and not test_quadratic1"
" and not test_twoarms"))))))))
"-k"
(string-append "not test_branin"
" and not test_distractor"
" and not test_q1lognormal"
" and not test_quadratic1"
" and not test_twoarms"
;; XXX Type error with this version of scipy
" and not test_distribution_rvs"))))))))
(propagated-inputs
(list python-cloudpickle
python-future
python-py4j
python-networkx
python-numpy
python-scipy
@ -1588,8 +1592,6 @@ interactive learning.")
python-tqdm))
(native-inputs
(list python-black
python-ipython
python-ipyparallel
python-nose
python-pymongo
python-pytest))
@ -1602,8 +1604,8 @@ discrete, and conditional dimensions.")
;; There have been no proper releases yet.
(define-public kaldi
(let ((commit "dd107fd594ac58af962031c1689abfdc10f84452")
(revision "0")
(let ((commit "be22248e3a166d9ec52c78dac945f471e7c3a8aa")
(revision "1")
(openfst openfst-1.7.3)) ;; Temporary bypass for upstream issues
(package
(name "kaldi")
@ -1616,14 +1618,14 @@ discrete, and conditional dimensions.")
(file-name (git-file-name name version))
(sha256
(base32
"0iqbzgn7gzmgwvjfzifpbwwidxx887qmlgmsjkg7b1yzyfv00l21"))))
"1wkxz3p0h68mxbg41i1wygir2r4rraxbb4672xkkvvs85r6c8r8i"))))
(build-system gnu-build-system)
(arguments
`(#:test-target "test"
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'chdir
(lambda _ (chdir "src") #t))
(lambda _ (chdir "src")))
(replace 'configure
(lambda* (#:key build system inputs outputs #:allow-other-keys)
(when (not (or (string-prefix? "x86_64" system)
@ -1669,8 +1671,7 @@ discrete, and conditional dimensions.")
(invoke "make" "-C" "onlinebin" "depend")
(invoke "make" "-C" "onlinebin")
(invoke "make" "-C" "gst-plugin" "depend")
(invoke "make" "-C" "gst-plugin")
#t))
(invoke "make" "-C" "gst-plugin")))
;; TODO: also install the executables.
(replace 'install
(lambda* (#:key outputs #:allow-other-keys)
@ -1691,8 +1692,7 @@ discrete, and conditional dimensions.")
(install-file file target-dir)))
(find-files "." "\\.h"))
(install-file "gst-plugin/libgstonlinegmmdecodefaster.so"
(string-append lib "/gstreamer-1.0"))
#t))))))
(string-append lib "/gstreamer-1.0"))))))))
(inputs
(list alsa-lib
`(,gfortran "lib")
@ -1814,8 +1814,8 @@ written in C++.")
(find-files "." "\\.h")))))))))))
(define-public gst-kaldi-nnet2-online
(let ((commit "cb227ef43b66a9835c14eb0ad39e08ee03c210ad")
(revision "2"))
(let ((commit "7888ae562a65bd7e406783ce2c33535bc66a30ef")
(revision "3"))
(package
(name "gst-kaldi-nnet2-online")
(version (git-version "0" revision commit))
@ -1827,12 +1827,13 @@ written in C++.")
(file-name (git-file-name name version))
(sha256
(base32
"1i6ffwiavxx07ri0lxix6s8q0r31x7i4xxvhys5jxkixf5q34w8g"))))
"0xp59a6lmx1y24i8bkmxcm27lhm5x5m6y41670yjzhamcbnx8jcr"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; there are none
#:make-flags
(list (string-append "SHELL="
(list
#:tests? #f ; there are none
#:make-flags
'(list (string-append "SHELL="
(assoc-ref %build-inputs "bash") "/bin/bash")
(string-append "KALDI_ROOT="
(assoc-ref %build-inputs "kaldi-src"))
@ -1840,33 +1841,32 @@ written in C++.")
(assoc-ref %build-inputs "kaldi") "/lib")
"KALDI_FLAVOR=dynamic")
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'chdir
(lambda _ (chdir "src") #t))
(replace 'configure
(lambda* (#:key inputs #:allow-other-keys)
(let ((glib (assoc-ref inputs "glib")))
(setenv "CXXFLAGS" "-fPIC")
(setenv "CPLUS_INCLUDE_PATH"
(string-append glib "/include/glib-2.0:"
glib "/lib/glib-2.0/include:"
(assoc-ref inputs "gstreamer")
"/include/gstreamer-1.0")))
(substitute* "Makefile"
(("include \\$\\(KALDI_ROOT\\)/src/kaldi.mk") "")
(("\\$\\(error Cannot find") "#"))
#t))
(add-before 'build 'build-depend
(lambda* (#:key make-flags #:allow-other-keys)
(apply invoke "make" "depend" make-flags)))
(replace 'install
(lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(lib (string-append out "/lib/gstreamer-1.0")))
(install-file "libgstkaldinnet2onlinedecoder.so" lib)
#t))))))
'(modify-phases %standard-phases
(add-after 'unpack 'chdir
(lambda _ (chdir "src")))
(replace 'configure
(lambda* (#:key inputs #:allow-other-keys)
(let ((glib (assoc-ref inputs "glib")))
(setenv "CXXFLAGS" "-fPIC")
(setenv "CPLUS_INCLUDE_PATH"
(string-append glib "/include/glib-2.0:"
glib "/lib/glib-2.0/include:"
(assoc-ref inputs "gstreamer")
"/include/gstreamer-1.0:"
(getenv "CPLUS_INCLUDE_PATH"))))
(substitute* "Makefile"
(("include \\$\\(KALDI_ROOT\\)/src/kaldi.mk") "")
(("\\$\\(error Cannot find") "#"))))
(add-before 'build 'build-depend
(lambda* (#:key make-flags #:allow-other-keys)
(apply invoke "make" "depend" make-flags)))
(replace 'install
(lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(lib (string-append out "/lib/gstreamer-1.0")))
(install-file "libgstkaldinnet2onlinedecoder.so" lib)))))))
(inputs
(list glib gstreamer jansson openfst kaldi))
(list glib gstreamer jansson openfst-1.7.3 kaldi))
(native-inputs
`(("bash" ,bash)
("glib:bin" ,glib "bin") ; glib-genmarshal
@ -1882,8 +1882,8 @@ automatically.")
(define-public kaldi-gstreamer-server
;; This is the tip of the py3 branch
(let ((commit "f68cab490be7eb0da2af1475fbc16655f50a60cb")
(revision "2"))
(let ((commit "f79e204d751a5964918001822e4520fa2acfd246")
(revision "3"))
(package
(name "kaldi-gstreamer-server")
(version (git-version "0" revision commit))
@ -1895,7 +1895,7 @@ automatically.")
(file-name (git-file-name name version))
(sha256
(base32
"17lh1368vkg8ngrcbn2phvigzlmalrqg6djx2gg61qq1a0nj87dm"))))
"1iijq8jmgdxr7961inal1ggs496ymxradm51m4sqx8vl983x14y8"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; there are no tests that can be run automatically
@ -1925,8 +1925,7 @@ automatically.")
"-m" "compileall"
"-f" ; force rebuild
,file)))
(find-files "." "\\.py$")))
#t))
(find-files "." "\\.py$")))))
(replace 'install
(lambda* (#:key inputs outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
@ -1965,14 +1964,13 @@ exec ~a ~a/~a \"$@\"~%"
(list server client worker)
(list "master_server.py"
"client.py"
"worker.py")))
#t))))))
"worker.py")))))))))
(inputs
`(("gst-kaldi-nnet2-online" ,gst-kaldi-nnet2-online)
("python" ,python-wrapper)
("python-pygobject" ,python-pygobject)
("python-pyyaml" ,python-pyyaml)
("python-tornado" ,python-tornado-6)))
(list gst-kaldi-nnet2-online
python-wrapper
python-pygobject
python-pyyaml
python-tornado-6))
(home-page "https://github.com/alumae/kaldi-gstreamer-server")
(synopsis "Real-time full-duplex speech recognition server")
(description "This is a real-time full-duplex speech recognition server,

81
gnu/packages/mail.scm
View file

@ -1164,7 +1164,7 @@ security functionality including PGP, S/MIME, SSH, and SSL.")
(define-public mu
(package
(name "mu")
(version "1.8.11")
(version "1.8.13")
(source (origin
(method git-fetch)
(uri (git-reference
@ -1173,7 +1173,7 @@ security functionality including PGP, S/MIME, SSH, and SSL.")
(file-name (git-file-name name version))
(sha256
(base32
"0b5h5kdalv62z31aqyipymiqhazfssbx4c7ww96nn41a0l0g0ir0"))))
"0y4f5p7pwmaj8733rjzg29038dw33057qlsbsq2wapvp24wcjymr"))))
(build-system meson-build-system)
(native-inputs
(list pkg-config
@ -2566,13 +2566,13 @@ maintained.")
(define-public khard
(package
(name "khard")
(version "0.17.0")
(version "0.18.0")
(source (origin
(method url-fetch)
(uri (pypi-uri name version))
(sha256
(base32
"062nv4xkfsjc11k9m52dh6xjn9z68a4a6x1s8z05wwv4jbp1lkhn"))))
"05860fdayqap128l7i6bcmi9kdyi2gx02g2pmh88d56xgysd927y"))))
(build-system python-build-system)
(arguments
`(#:phases
@ -2581,8 +2581,7 @@ maintained.")
(lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(zsh (string-append out "/share/zsh/site-functions")))
(copy-recursively "misc/zsh" zsh)
#t))))))
(copy-recursively "misc/zsh" zsh)))))))
(native-inputs
(list python-setuptools-scm))
(inputs
@ -3294,7 +3293,7 @@ writing OpenSMTPd filters.")
(define-public opensmtpd-filter-dkimsign
(package
(name "opensmtpd-filter-dkimsign")
(version "0.5")
(version "0.6")
(source
(origin
(method url-fetch)
@ -3303,7 +3302,7 @@ writing OpenSMTPd filters.")
(string-append "https://distfiles.sigtrap.nl/"
"filter-dkimsign-" version ".tar.gz")))
(sha256
(base32 "0jwp47ixibnz8rghn193bk2hxh1j1zfrnidml18j7d7cylxfrd55"))))
(base32 "1hrn31hayr0hb32km5c42hhbaxw7g3jcgm59p0v0ydlj1fs0sprv"))))
(build-system gnu-build-system)
(arguments
`(#:make-flags
@ -3324,8 +3323,8 @@ writing OpenSMTPd filters.")
(list mandoc)) ; silently installs empty man page without
(inputs
(list libevent libopensmtpd
;; XXX Our OpenSMTPd package uses libressl, but this package currently
;; supports HAVE_ED25519 only with openssl. Switch back when possible.
;; Our OpenSMTPd package uses libressl, but this package currently
;; supports HAVE_ED25519 only with openssl.
openssl))
(home-page "http://imperialat.at/dev/filter-dkimsign/")
(synopsis "OpenSMTPd filter for signing mail with DKIM")
@ -4027,11 +4026,11 @@ It is a replacement for the @command{urlview} program.")
(license license:gpl2+)))
(define-public mumi
(let ((commit "4590e4822dda792f59f69b764824aa148d92dad0")
(let ((commit "0a90eeda9b5e12a2f83e3917c46fa539f308d0c8")
(revision "2"))
(package
(name "mumi")
(version (git-version "0.0.2" revision commit))
(version (git-version "0.0.4" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
@ -4040,33 +4039,38 @@ It is a replacement for the @command{urlview} program.")
(file-name (git-file-name name version))
(sha256
(base32
"16brl1dk92kppzvxx8q5hcqiywg863s4sz5wb64hz8a37xa4hkyr"))))
"1yxi1vvygrk8qd0mqh65qh1g99r5d4rlymj8amcn80ggi3z32byk"))))
(build-system gnu-build-system)
(arguments
`(#:modules ((guix build gnu-build-system)
(list
#:modules '((guix build gnu-build-system)
((guix build guile-build-system)
#:select (target-guile-effective-version))
(guix build utils))
#:imported-modules ((guix build guile-build-system)
#:imported-modules `((guix build guile-build-system)
,@%gnu-build-system-modules)
#:configure-flags '("--localstatedir=/var")
#:configure-flags '(list "--localstatedir=/var")
#:phases
(modify-phases %standard-phases
(add-after 'install 'wrap-executable
(lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(bin (string-append out "/bin"))
(version (target-guile-effective-version))
(scm (string-append out "/share/guile/site/" version))
(go (string-append out "/lib/guile/" version
"/site-ccache")))
(wrap-program (string-append bin "/mumi")
`("GUILE_LOAD_PATH" ":" prefix
(,scm ,(getenv "GUILE_LOAD_PATH")))
`("GUILE_LOAD_COMPILED_PATH" ":" prefix
(,go ,(getenv "GUILE_LOAD_COMPILED_PATH"))))))))))
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'install-picocss
(lambda* (#:key inputs #:allow-other-keys)
(let ((pico (dirname (search-input-file inputs "/scss/pico.scss"))))
(mkdir-p "assets/pico/scss")
(copy-recursively pico "assets/pico/scss"))))
(add-after 'install 'wrap-executable
(lambda _
(let* ((bin (string-append #$output "/bin"))
(version (target-guile-effective-version))
(scm (string-append #$output "/share/guile/site/" version))
(go (string-append #$output "/lib/guile/" version
"/site-ccache")))
(wrap-program (string-append bin "/mumi")
`("GUILE_LOAD_PATH" ":" prefix
(,scm ,(getenv "GUILE_LOAD_PATH")))
`("GUILE_LOAD_COMPILED_PATH" ":" prefix
(,go ,(getenv "GUILE_LOAD_COMPILED_PATH"))))))))))
(inputs
(list guile-email-latest
guile-fibers
@ -4080,7 +4084,16 @@ It is a replacement for the @command{urlview} program.")
guile-3.0
mailutils))
(native-inputs
(list autoconf automake pkg-config))
(list autoconf automake pkg-config sassc
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/picocss/pico.git")
(commit "3052db4bd3439e236479dc0f98069f7d3b559486")))
(file-name (git-file-name "pico" "1.5.6"))
(sha256
(base32
"1gs1li48hqizx7lc4n2fdxn9i2v4vafkqpza7svvfpcamfz29jpi")))))
(home-page "https://git.elephly.net/software/mumi.git")
(synopsis "Debbugs web interface")
(description "Mumi is a Debbugs web interface.")
@ -4471,7 +4484,7 @@ on RFC 3501 and original @code{imaplib} module.")
(define-public rspamd
(package
(name "rspamd")
(version "3.2")
(version "3.4")
(source
(origin
(method git-fetch)
@ -4479,7 +4492,7 @@ on RFC 3501 and original @code{imaplib} module.")
(url "https://github.com/rspamd/rspamd")
(commit version)))
(sha256
(base32 "122d5m1nfxxz93bhsk8lm4dazvdknzphb0a1188m7bsa4iynbfv2"))
(base32 "0jgmi8wqzsnwvfj6w4njzhxhcawbafsdxjkx1ym8r2jx8k4hwhi8"))
(file-name (git-file-name name version))))
(build-system cmake-build-system)
(arguments

5
gnu/packages/man.scm
View file

@ -270,7 +270,7 @@ PostScript, and PDF. Additional tools include the @command{man} viewer, and
(define-public man-pages
(package
(name "man-pages")
(version "6.00")
(version "6.01")
(source
(origin
(method url-fetch)
@ -280,7 +280,7 @@ PostScript, and PDF. Additional tools include the @command{man} viewer, and
(string-append "mirror://kernel.org/linux/docs/man-pages/Archive/"
"man-pages-" version ".tar.xz")))
(sha256
(base32 "1252c1356z5spya3yl0lcmmymglx3bmfwmamiz1y5l13xqpwbnwy"))))
(base32 "02swrdim3wq4ppsfv0zdxbnn9apz0bb4fyaihjlq1i484xxigrcb"))))
(build-system gnu-build-system)
(arguments
(list
@ -316,6 +316,7 @@ Linux kernel and C library interfaces employed by user-space programs.")
(define-public man-pages-posix
(package
(name "man-pages-posix")
;; Make sure that updates are still legally distributable. 2017-a is not.
(version "2013-a")
(source
(origin

4
gnu/packages/mastodon.scm
View file

@ -42,13 +42,13 @@
(define-public toot
(package
(name "toot")
(version "0.30.1")
(version "0.32.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "toot" version))
(sha256
(base32 "0r9f2frlwfxkcv6c9lh36maph90v2yp6s7phynbrb3m7v35xzaxz"))))
(base32 "0diskgvqmnkjl4k6sdda8f1sfz0c4w0j8ppv1q7p84phh9vgml6g"))))
(build-system python-build-system)
(arguments
'(#:phases

180
gnu/packages/maths.scm
View file

@ -58,6 +58,7 @@
;;; Copyright © 2022 Liliana Marie Prikler <liliana.prikler@gmail.com>
;;; Copyright © 2022 Maximilian Heisinger <mail@maxheisinger.at>
;;; Copyright © 2022 Akira Kyle <akira@akirakyle.com>
;;; Copyright © 2022 Roman Scherer <roman.scherer@burningswell.com>
;;;
;;; This file is part of GNU Guix.
;;;
@ -93,6 +94,7 @@
#:use-module (guix build-system ocaml)
#:use-module (guix build-system perl)
#:use-module (guix build-system python)
#:use-module (guix build-system pyproject)
#:use-module (guix build-system ruby)
#:use-module (gnu packages algebra)
#:use-module (gnu packages audio)
@ -127,6 +129,7 @@
#:use-module (gnu packages image)
#:use-module (gnu packages java)
#:use-module (gnu packages less)
#:use-module (gnu packages libffi)
#:use-module (gnu packages lisp)
#:use-module (gnu packages linux)
#:use-module (gnu packages llvm)
@ -1850,16 +1853,16 @@ similar to MATLAB, GNU Octave or SciPy.")
(define-public netcdf
(package
(name "netcdf")
(version "4.7.4")
(version "4.9.0")
(source
(origin
(method url-fetch)
(uri (string-append
"https://www.unidata.ucar.edu/downloads/netcdf/ftp/"
"netcdf-c-" version ".tar.gz"))
"https://downloads.unidata.ucar.edu/netcdf-c/" version
"/netcdf-c-" version ".tar.gz"))
(sha256
(base32
"1a2fpp15a2rl1m50gcvvzd9y6bavl6vjf9zzf63sz5gdmq06yiqf"))
"0j8b814mjdqvqanzmrxpq8hn33n22cdzb3gf9vhya24wnwi615ac"))
(modules '((guix build utils)))
(snippet
;; Make sure this variable is defined only once. Failing to do so
@ -1872,13 +1875,18 @@ similar to MATLAB, GNU Octave or SciPy.")
(native-inputs
(list m4 doxygen graphviz))
(inputs
`(("hdf4" ,hdf4-alt)
`(("curl" ,curl)
("hdf4" ,hdf4-alt)
("hdf5" ,hdf5)
("curl" ,curl)
("zlib" ,zlib)
("libjpeg" ,libjpeg-turbo)))
("libjpeg" ,libjpeg-turbo)
("libxml2" ,libxml2)
("unzip" ,unzip)
("zlib" ,zlib)))
(arguments
`(#:configure-flags '("--enable-doxygen" "--enable-dot" "--enable-hdf4")
`(#:configure-flags '("--enable-doxygen"
"--enable-dot"
"--enable-hdf4"
"--disable-dap-remote-tests")
#:phases (modify-phases %standard-phases
(add-before 'configure 'fix-source-date
@ -1889,8 +1897,7 @@ similar to MATLAB, GNU Octave or SciPy.")
;; package not reproducible.
(substitute* "./configure"
(("date -u -d \"\\$\\{SOURCE_DATE_EPOCH\\}\"")
"date --date='@0'"))
#t))
"date --date='@0'"))))
(add-after 'configure 'patch-settings
(lambda _
;; libnetcdf.settings contains the full filename of the compilers
@ -1899,8 +1906,11 @@ similar to MATLAB, GNU Octave or SciPy.")
;; store items.
(substitute* "libnetcdf.settings"
(("(/gnu/store/)([0-9A-Za-z]*)" all prefix hash)
(string-append prefix (string-take hash 10) "...")))
#t)))
(string-append prefix (string-take hash 10) "...")))))
(add-before 'check 'fix-test-rcmerge
(lambda _
;; Set HOME, to fix the test-rcmerge test.
(setenv "HOME" "/tmp"))))
#:parallel-tests? #f)) ;various race conditions
(home-page "https://www.unidata.ucar.edu/software/netcdf/")
@ -2626,67 +2636,119 @@ satisfiability checking (SAT).")
(define-public clingo
(package
(name "clingo")
(version "5.5.0")
(version "5.6.2")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/potassco/clingo")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(modules '((guix build utils)))
(snippet
#~(begin
(delete-file-recursively "clasp")
;; TODO: Unvendor other third-party stuff
(delete-file-recursively "third_party/catch")))
(sha256
(base32
"0rfjwkcwm0mmf3r4i7asyjwb6cia4i7px7fn2kdbi9j85qvas4pb"))))
"19s59ndcm2yj0kxlikfxnx2bmp6b7n31wq1zvwc7hyk37rqarwys"))))
(build-system cmake-build-system)
(arguments
`(#:configure-flags `("-DCLINGO_BUILD_TESTS=on"
"-DCLINGO_INSTALL_LIB=on"
"-DCLINGO_BUILD_STATIC=off"
"-DCLINGO_BUILD_SHARED=on"
;; XXX: Clingo requries private headers and
;; sources from clasp
,(string-append
"-DCLASP_SOURCE_DIR="
(assoc-ref %build-inputs "clasp-src")))
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch-cmake
(lambda _
(substitute* "CMakeLists.txt"
(("add_subdirectory\\(clasp\\)")
"find_package(clasp REQUIRED)"))
(substitute* "libclingo/CMakeLists.txt"
(("\"cmake/Clingo\"") "\"cmake/clingo\"")
(("ClingoConfig\\.cmake") "clingo-config.cmake")
(("ClingoConfigVersion\\.cmake")
"clingo-config-version.cmake"))
(substitute* "cmake/ClingoConfig.cmake.in"
(("find_package\\(Clasp") "find_package(clasp"))
(rename-file "cmake/ClingoConfig.cmake.in"
"cmake/clingo-config.cmake.in")))
(add-after 'unpack 'skip-failing-tests
(lambda _
(with-directory-excursion "libclingo/tests"
(substitute* "CMakeLists.txt"
(("COMMAND test_clingo" all)
(string-append all
" -f "
"\"${CMAKE_CURRENT_SOURCE_DIR}/good.txt\"")))
(call-with-output-file "good.txt"
(lambda (port)
(for-each (lambda (test) (format port "~s~%" test))
'("parse-ast-v2" "add-ast-v2" "build-ast-v2"
"unpool-ast-v2" "parse_term"
"propagator" "propgator-sequence-mining"
"symbol" "visitor"))))))))))
(inputs
(list clasp libpotassco))
(native-inputs
`(("clasp-src" ,(package-source clasp))))
(list
#:configure-flags #~`("-DCLINGO_BUILD_TESTS=on"
"-DCLINGO_INSTALL_LIB=on"
"-DCLINGO_BUILD_STATIC=off"
"-DCLINGO_BUILD_SHARED=on"
"-DCLINGO_USE_LOCAL_CLASP=off"
"-DCLINGO_USE_LOCAL_CATCH=off")
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'patch-cmake
(lambda _
(substitute* "CMakeLists.txt"
(("add_subdirectory\\(clasp\\)")
"find_package(clasp REQUIRED)"))
(substitute* "libclingo/CMakeLists.txt"
(("\"cmake/Clingo\"") "\"cmake/clingo\"")
(("ClingoConfig\\.cmake") "clingo-config.cmake")
(("ClingoConfigVersion\\.cmake")
"clingo-config-version.cmake"))
(substitute* "cmake/ClingoConfig.cmake.in"
(("find_package\\(Clasp") "find_package(clasp"))
(rename-file "cmake/ClingoConfig.cmake.in"
"cmake/clingo-config.cmake.in")))
(add-after 'unpack 'skip-failing-tests
(lambda _
(with-directory-excursion "libclingo/tests"
(substitute* "CMakeLists.txt"
(("COMMAND test_clingo" all)
(string-append all
" -f "
"\"${CMAKE_CURRENT_SOURCE_DIR}/good.txt\"")))
(call-with-output-file "good.txt"
(lambda (port)
(for-each (lambda (test) (format port "~s~%" test))
'("parse-ast-v2" "add-ast-v2" "build-ast-v2"
"unpool-ast-v2" "parse_term"
"propagator" "propgator-sequence-mining"
"symbol" "visitor"))))))))))
(inputs (list catch2-3.1 clasp libpotassco))
(native-inputs (list pkg-config))
(home-page "https://potassco.org/")
(synopsis "Grounder and solver for logic programs")
(description "Clingo computes answer sets for a given logic program.")
(license license:expat)))
(define-public python-clingo
(package
(inherit clingo)
(name "python-clingo")
(arguments
(substitute-keyword-arguments (package-arguments clingo)
((#:configure-flags flags #~'())
#~(cons* "-DCLINGO_BUILD_WITH_PYTHON=pip"
"-DCLINGO_USE_LIB=yes"
#$flags))
((#:phases phases #~%standard-phases)
#~(modify-phases #$phases
(add-after 'unpack 'fix-failing-tests
(lambda _
(substitute* "libpyclingo/clingo/tests/test_conf.py"
(("ctl\\.solve\\(on_statistics=on_statistics\\)" all)
(string-append
all
"; self.skipTest(\"You shall not fail.\")")))))))))
(inputs (list clingo python-wrapper))
(propagated-inputs (list python-cffi))
(native-inputs (modify-inputs (package-native-inputs clingo)
(prepend python-scikit-build)))
(synopsis "Python bindings for clingo")
(description "This package provides Python bindings to the clingo package,
making it so that you can write @acronym{ASPs, Answer Set Programs} through
Python code.")))
(define-public python-telingo
(package
(name "python-telingo")
(version "2.1.1")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/potassco/telingo")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(patches (search-patches "python-telingo-fix-comparison.patch"))
(sha256
(base32
"0g3khxfdzc2hc7dkiyyqhb399h6h21m5wkp6wy8w71n0m32fiy53"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-clingo))
(home-page "https://potassco.org/")
(synopsis "Solve dynamic temporal logic programs")
(description "This package provides a system to solve dynamic temporal
logic programs based on clingo.")
(license license:expat)))
(define-public ceres
(package
(name "ceres-solver")

19
gnu/packages/mercury.scm
View file

@ -1,5 +1,6 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2020 Brett Gilio <brettg@gnu.org>
;;; Copyright © 2022 jgart <jgart@dismail.de>
;;;
;;; This file is part of GNU Guix.
;;;
@ -56,7 +57,7 @@
(define-public mercury-minimal
(package
(name "mercury-minimal")
(version "20.06.1")
(version "22.01.4")
(source (origin
(method url-fetch)
(uri (string-append
@ -64,7 +65,7 @@
version ".tar.gz"))
(sha256
(base32
"07qwkk871yxd4q1sw5xv26g8jrpvnpprmzvfd7zg7i142kl3l2gg"))))
"1vakjg4rqpplkxw7k91qv8jvlasrr6iwrzrylwqllbq088qs0mbp"))))
(build-system gnu-build-system)
(arguments
`(#:modules ((guix build gnu-build-system)
@ -112,7 +113,6 @@
"scripts/Mmake.vars.in"
"scripts/mdb.in"
"scripts/rs6000_hack"
"scripts/fullarch"
"scripts/mmc.in"
"scripts/canonical_grade"
"scripts/mprof.in"
@ -143,14 +143,14 @@
(gc-fork
libatomic-ops
"https://github.com/Mercury-Language/libatomic_ops.git"
"49b70d57f6922fd8be55a7dcb77955c8abfc9ae9"
"1flvwscsa6b2b8a38vhhcgl10bbkb5nnihw7s7iia60cinf7wcqm")))
"95809e50a5ff6e765f1af2f589796970a73e9c00"
"0a1y795bvzwzk1v8d9g6wvifj7hvhmxlir1g581bq2slj16h95iz")))
("libgc" ,(package-source
(gc-fork
libgc-7
"https://github.com/Mercury-Language/bdwgc.git"
"43ac2ea45261ba0a715534e9da41b2504904c46a"
"0bmzmbs7id0ndyhy9xli6fhfad1shrim6vmy2k8m1nqr5wb31q76")))
"def741752f55f9068d4f469a14c4b2c168829730"
"07d94j5l9w6l2kjmcwblgn5lf77aw3r0zjn22pq4hbhknky6ny43")))
("pkg-config" ,pkg-config)))
(synopsis "Pure logic programming language (used only for
bootstrapping dependent Mercury)")
@ -171,7 +171,7 @@ separate compilation, and numerous optimization/time trade-offs.")
(define-public mercury
(package (inherit mercury-minimal)
(name "mercury")
(version "20.06.1")
(version "22.01.4")
(source
(origin
(method git-fetch)
@ -183,7 +183,7 @@ separate compilation, and numerous optimization/time trade-offs.")
(file-name (git-file-name name version))
(sha256
(base32
"1b6rmdinw8mj6n9sc7c75kkf42gd2k254rf51x4snlrqckxj7aaz"))))
"0ycy1j9a4rdj6d37x02dj6kyr00mykvc5kykci11fim906d92gzh"))))
(arguments
(substitute-keyword-arguments
(package-arguments mercury-minimal)
@ -205,7 +205,6 @@ separate compilation, and numerous optimization/time trade-offs.")
"scripts/Mmake.vars.in"
"scripts/mdb.in"
"scripts/rs6000_hack"
"scripts/fullarch"
"scripts/mmc.in"
"scripts/mprof.in"
"scripts/gud.el"

8
gnu/packages/messaging.scm
View file

@ -2380,7 +2380,7 @@ QMatrixClient project.")
curl
json-modern-cxx
libevent
libolm
olm
libsodium
openssl
spdlog
@ -2459,11 +2459,11 @@ for the Matrix protocol. It is built on to of @code{Boost.Asio}.")
curl
gst-plugins-base
gst-plugins-bad ; sdp & webrtc for voip
gst-plugins-good ; rtpmanager for voip
gst-plugins-good-qt ; rtpmanager for voip
json-modern-cxx
libevent
libnice ; for voip
libolm
olm
lmdb
lmdbxx
mtxclient
@ -2884,7 +2884,7 @@ validating international phone numbers.")
libgcrypt
libgee
libhandy
libolm
olm
libphonenumber
modem-manager
pidgin

2
gnu/packages/monitoring.scm
View file

@ -636,7 +636,7 @@ devices.")
;; Required because of patched sources.
(invoke "autoreconf" "-vfi"))))))
(inputs
(list rrdtool curl libyajl))
(list rrdtool curl yajl))
(native-inputs
(list autoconf automake libtool pkg-config))
(home-page "https://collectd.org/")

2
gnu/packages/mp3.scm
View file

@ -643,7 +643,7 @@ command-line tool.")
(inputs
;; requires one of FFmpeg (prefered), FFTW3 or vDSP
;; use the same ffmpeg version as for acoustid-fingerprinter
(list ffmpeg boost))
(list ffmpeg-4 boost))
(home-page "https://acoustid.org/chromaprint")
(synopsis "Audio fingerprinting library")
(description "Chromaprint is a library for calculating audio

10
gnu/packages/mpd.scm
View file

@ -116,7 +116,7 @@ interfacing MPD in the C, C++ & Objective C languages.")
(define-public mpd
(package
(name "mpd")
(version "0.23.10")
(version "0.23.11")
(source (origin
(method url-fetch)
(uri
@ -125,7 +125,7 @@ interfacing MPD in the C, C++ & Objective C languages.")
"/mpd-" version ".tar.xz"))
(sha256
(base32
"1a764k504nh9vqmsd92qh8sg03fwns19d7mypm618j6c8bmqqp30"))))
"1afwvw2670yz3kxzlqjlg9r8ra8fjihj97hgc6skiwnzz6lfgd7d"))))
(build-system meson-build-system)
(arguments
(list
@ -170,7 +170,7 @@ interfacing MPD in the C, C++ & Objective C languages.")
zlib))
(native-inputs (list cmake pkg-config python-sphinx))
;; Missing optional inputs:
;; libyajl
;; yajl
;; libcdio_paranoia
;; libmms
;; libadplug
@ -581,7 +581,7 @@ mpdevil loads all tags and covers on demand.")
(define-public mympd
(package
(name "mympd")
(version "10.1.3")
(version "10.1.6")
(source (origin
(method git-fetch)
(uri (git-reference
@ -590,7 +590,7 @@ mpdevil loads all tags and covers on demand.")
(file-name (git-file-name name version))
(sha256
(base32
"16cvjwbyb1m88kmgylp95p82a4xdjikmrw9arl6kvmgcbyw317yp"))))
"06i8v8dh2x4lrph9lm56h5yy698y95ic5xrgmyisafvxd239sn0x"))))
(build-system cmake-build-system)
(arguments
(list #:tests? #f)) ; no test target

184
gnu/packages/music.scm
View file

@ -3554,7 +3554,7 @@ tune-in sender list from @url{http://opml.radiotime.com}.")
(define-public pianobar
(package
(name "pianobar")
(version "2020.11.28")
(version "2022.04.01")
(source (origin
(method git-fetch)
(uri (git-reference
@ -3563,7 +3563,7 @@ tune-in sender list from @url{http://opml.radiotime.com}.")
(file-name (git-file-name name version))
(sha256
(base32
"13qx52a1yj2wghf7yd9jf4ar92scbc8zgqdq0kkqf4p9isf1phf3"))))
"14s97fx83dg8szbib2y608hjzfdhz20hch2ify3gqhji58v69wil"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; no tests
@ -4730,7 +4730,7 @@ standalone JACK client and an LV2 plugin is also available.")
(define-public sfizz
(package
(name "sfizz")
(version "1.0.0")
(version "1.2.0")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/sfztools/sfizz"
@ -4738,34 +4738,38 @@ standalone JACK client and an LV2 plugin is also available.")
"/sfizz-" version ".tar.gz"))
(sha256
(base32
"1pk67xvyqkvhjz2q5hbj5v0mnfvdvvl8vl5bsh6ymwiq3glkd41l"))
"1wsr3dpn7a7whqn480m02kp6n4raamnfi3imhf2q8k58md1yn9jw"))
(modules '((guix build utils)))
(snippet
;; TODO: pugixml is bundled, but can only be removed in
;; versions after 1.0.0.
'(for-each delete-file-recursively
'("external/abseil-cpp"
"external/simde"
"plugins/editor/external/vstgui4"
"plugins/vst")))))
"plugins/vst"
"src/external/pugixml")))))
(build-system cmake-build-system)
(arguments
`(#:configure-flags
(list "-DSFIZZ_LV2_UI=OFF"
"-DSFIZZ_VST=OFF"
"-DSFIZZ_VST2=OFF"
"-DSFIZZ_TESTS=ON"
"-DSFIZZ_USE_SYSTEM_ABSEIL=ON")))
(list
#:configure-flags
#~(list "-DSFIZZ_LV2_UI=OFF"
"-DSFIZZ_VST=OFF"
"-DSFIZZ_VST2=OFF"
"-DSFIZZ_TESTS=ON"
"-DSFIZZ_USE_SYSTEM_ABSEIL=ON"
"-DSFIZZ_USE_SYSTEM_PUGIXML=ON"
;; XXX: Guix SIMDe version 0.7.2 is not enough.
;; "-DSFIZZ_USE_SYSTEM_SIMDE=ON"
)))
(native-inputs
(list pkg-config))
(inputs
`(("abseil-cpp" ,abseil-cpp)
("glib" ,glib)
("jack" ,jack-2)
("lv2" ,lv2)
("libsamplerate" ,libsamplerate)
("pugixml" ,pugixml)
("simde" ,simde)))
(list abseil-cpp
glib
jack-2
lv2
libsamplerate
pugixml
simde))
(home-page "https://sfz.tools/sfizz/")
(synopsis "SFZ parser and synth library")
(description "Sfizz provides an SFZ parser and synth C++ library. It
@ -4775,7 +4779,7 @@ includes LV2 plugins and a JACK standalone client.")
(define-public musescore
(package
(name "musescore")
(version "3.6.2")
(version "4.0")
(source
(origin
(method git-fetch)
@ -4784,22 +4788,22 @@ includes LV2 plugins and a JACK standalone client.")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0szvb6mlzy9df9lrq546rrpixa480knzij1wgh6ilflxz87q048q"))
(base32 "16rcwr6fzghv8100syzicabqg8jqvng3zzsi6h3ja4zkp9hcbkcr"))
(modules '((guix build utils)))
(snippet
;; Remove unused libraries.
'(begin
;; Remove unused libraries...
(for-each delete-file-recursively
'("thirdparty/freetype"
"thirdparty/openssl"
"thirdparty/portmidi"
"thirdparty/qt-google-analytics"))))))
'("thirdparty/freetype"))
;; ... and precompiled binaries.
(delete-file-recursively "src/diagnostics/crashpad_handler")
(substitute* "src/diagnostics/CMakeLists.txt"
(("install") "#install"))))))
(build-system qt-build-system)
(arguments
`(#:configure-flags
`("-DBUILD_TELEMETRY_MODULE=OFF" ;don't phone home
"-DBUILD_WEBENGINE=OFF"
"-DDOWNLOAD_SOUNDFONT=OFF"
`("-DDOWNLOAD_SOUNDFONT=OFF"
"-DBUILD_DIAGNOSTICS=OFF"
"-DMUSESCORE_BUILD_CONFIG=release"
"-DUSE_SYSTEM_FREETYPE=ON")
;; There are tests, but no simple target to run. The command used to
@ -4811,6 +4815,8 @@ includes LV2 plugins and a JACK standalone client.")
;; Basically, it requires to start a whole new build process.
;; So we simply skip them.
#:tests? #f))
(native-inputs
(list git-minimal pkg-config qttools-5))
(inputs
(list alsa-lib
freetype
@ -4823,15 +4829,17 @@ includes LV2 plugins and a JACK standalone client.")
portaudio
portmidi
pulseaudio
python
qtbase-5
qtdeclarative-5
qtgraphicaleffects
qtnetworkauth-5
qtquickcontrols-5
qtquickcontrols2-5
qtscript
qtsvg-5
qtx11extras
qtxmlpatterns))
(native-inputs
(list pkg-config qttools-5))
(synopsis "Music composition and notation software")
(description
"MuseScore is a music score typesetter. Its main purpose is the creation
@ -4846,7 +4854,7 @@ appearance and layout are provided.
MuseScore can also play back scores through the built-in sequencer and SoundFont
sample library.")
(home-page "https://musescore.org")
(license license:gpl2)))
(license license:gpl3)))
(define-public muse-sequencer
(package
@ -5010,7 +5018,7 @@ specification and header.")
(define-public rosegarden
(package
(name "rosegarden")
(version "22.06")
(version "22.12")
(source
(origin
(method url-fetch)
@ -5018,61 +5026,62 @@ specification and header.")
(version-major+minor version) "/"
"rosegarden-" version ".tar.bz2"))
(sha256
(base32 "1nzs6g8g36g37zi8dl7gznc77596418g6rzm9a5vxcgbam8q494h"))))
(base32 "061xy3flmj7bllibkp5wzdycvghfxvyzdr9g9yrr5q3m70a7wznz"))))
(build-system cmake-build-system)
(arguments
`(#:configure-flags '("-DCMAKE_BUILD_TYPE=Release")
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch-tests
(lambda _
(substitute* "CMakeLists.txt"
(("BUILD_TESTING OFF") "BUILD_TESTING ON")
;; Make tests work.
((" -fvisibility=hidden") ""))))
(add-after 'unpack 'fix-references
(lambda* (#:key inputs #:allow-other-keys)
(substitute* "src/gui/general/ProjectPackager.cpp"
(("\"flac\\>")
(string-append "\"" (assoc-ref inputs "flac") "/bin/flac"))
(("\"wavpack\\>")
(string-append "\"" (assoc-ref inputs "wavpack") "/bin/wavpack"))
(("\"wvunpack\\>")
(string-append "\"" (assoc-ref inputs "wavpack") "/bin/wvunpack"))
(("\"bash\\>")
(string-append "\"" (assoc-ref inputs "bash") "/bin/bash"))
(("\"tar\\>")
(string-append "\"" (assoc-ref inputs "tar") "/bin/tar")))
(substitute* "src/gui/general/LilyPondProcessor.cpp"
(("\"convert-ly\\>")
(string-append "\"" (assoc-ref inputs "lilypond") "/bin/convert-ly"))
(("\"lilypond\\>")
(string-append "\"" (assoc-ref inputs "lilypond") "/bin/lilypond")))))
(add-after 'unpack 'make-reproducible
(lambda _
;; Prevent Last-Modified from being written.
;; The "*.qm" files that are used in locale.qrc would have a new
;; mtime otherwise that is written into qrc_locale.cpp in the
;; end - except when we disable it.
(substitute* "src/CMakeLists.txt"
(("COMMAND [$][{]QT_RCC_EXECUTABLE[}]")
"COMMAND ${QT_RCC_EXECUTABLE} --format-version 1")
;; Extraneous.
;;(("qt5_add_resources[(]rg_SOURCES ../data/data.qrc[)]")
;; "qt5_add_resources(rg_SOURCES ../data/data.qrc OPTIONS --format-version 1)")
)
;; Make hashtable traversal order predicable.
(setenv "QT_RCC_TEST" "1"))) ; important
(add-before 'check 'prepare-check
(lambda _
(setenv "QT_QPA_PLATFORM" "offscreen")
;; Tests create files in $HOME/.local/share/rosegarden .
(mkdir-p "/tmp/foo")
(setenv "HOME" "/tmp/foo")
(setenv "XDG_RUNTIME_DIR" "/tmp/foo"))))))
(list
#:configure-flags #~(list "-DCMAKE_BUILD_TYPE=Release")
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'patch-tests
(lambda _
(substitute* "CMakeLists.txt"
(("BUILD_TESTING OFF") "BUILD_TESTING ON")
;; Make tests work.
((" -fvisibility=hidden") ""))))
(add-after 'unpack 'fix-references
(lambda* (#:key inputs #:allow-other-keys)
(substitute* "src/gui/general/ProjectPackager.cpp"
(("\"flac\\>")
(string-append "\"" (search-input-file inputs "/bin/flac")))
(("\"wavpack\\>")
(string-append "\"" (search-input-file inputs "/bin/wavpack")))
(("\"wvunpack\\>")
(string-append "\"" (search-input-file inputs "/bin/wvunpack")))
(("\"bash\\>")
(string-append "\"" (search-input-file inputs "/bin/bash")))
(("\"tar\\>")
(string-append "\"" (search-input-file inputs "/bin/tar"))))
(substitute* "src/gui/general/LilyPondProcessor.cpp"
(("\"convert-ly\\>")
(string-append "\"" (search-input-file inputs "/bin/convert-ly")))
(("\"lilypond\\>")
(string-append "\"" (search-input-file inputs "/bin/lilypond"))))))
(add-after 'unpack 'make-reproducible
(lambda _
;; Prevent Last-Modified from being written.
;; The "*.qm" files that are used in locale.qrc would have a new
;; mtime otherwise that is written into qrc_locale.cpp in the
;; end - except when we disable it.
(substitute* "src/CMakeLists.txt"
(("COMMAND [$][{]QT_RCC_EXECUTABLE[}]")
"COMMAND ${QT_RCC_EXECUTABLE} --format-version 1")
;; Extraneous.
;;(("qt5_add_resources[(]rg_SOURCES ../data/data.qrc[)]")
;; "qt5_add_resources(rg_SOURCES ../data/data.qrc OPTIONS --format-version 1)")
)
;; Make hashtable traversal order predicable.
(setenv "QT_RCC_TEST" "1"))) ; important
(add-before 'check 'prepare-check
(lambda _
(setenv "QT_QPA_PLATFORM" "offscreen")
;; Tests create files in $HOME/.local/share/rosegarden .
(mkdir-p "/tmp/foo")
(setenv "HOME" "/tmp/foo")
(setenv "XDG_RUNTIME_DIR" "/tmp/foo"))))))
(inputs
(list alsa-lib
bash
bash-minimal
dssi
flac
fftwf
@ -5083,12 +5092,13 @@ specification and header.")
lilypond
lrdf
qtbase-5
shared-mime-info
tar
lirc
wavpack
zlib))
(native-inputs
(list pkg-config qttools-5)) ;for qtlinguist
(list pkg-config qttools-5)) ;for qtlinguist
(synopsis "Music composition and editing environment based around a MIDI
sequencer")
(description "Rosegarden is a music composition and editing environment
@ -6806,7 +6816,7 @@ choice.")
(list alsa-lib
boost
curl
ffmpeg
ffmpeg-4
lame
libev
libmicrohttpd

4
gnu/packages/nano.scm
View file

@ -31,13 +31,13 @@
(define-public nano
(package
(name "nano")
(version "7.0")
(version "7.1")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://gnu/nano/nano-" version ".tar.xz"))
(sha256
(base32 "0j91am8y8dy48dj1nf8p1lhpassgv2py3w414vc8d1rbig1ymmld"))))
(base32 "0dk8820w631ip6hpl7qc8kg5viw7wc154l7fvpvg06bmkcg7bfjp"))))
(build-system gnu-build-system)
(inputs
(list gettext-minimal ncurses))

33
gnu/packages/ncdu.scm
View file

@ -30,17 +30,20 @@
#:use-module (gnu packages perl)
#:use-module (gnu packages zig))
(define-public ncdu
(define-public ncdu-1
;; This old version is ‘LTS’. Version 2 works fine and has more features,
;; but Zig is still a fast-moving target and doesn't support cross-compilation
;; yet, so we'll keep both for just a little longer.
(package
(name "ncdu")
(version "1.17")
(version "1.18")
(source (origin
(method url-fetch)
(uri (string-append "https://dev.yorhel.nl/download/ncdu-"
version ".tar.gz"))
(sha256
(base32
"1wfvdajln0iy7364nxkg4bpgdv8l3b6a9bnkhy67icqsxnl4a1w1"))))
"15czid6584j7vclwrw85ihahknghxv2w6b9mrk9cbjc0cnls2drw"))))
(build-system gnu-build-system)
(inputs (list ncurses))
(synopsis "Ncurses-based disk usage analyzer")
@ -55,10 +58,10 @@ ncurses installed.")
version)))
(home-page "https://dev.yorhel.nl/ncdu")))
(define-public ncdu-2
(define-public ncdu
(package
(inherit ncdu)
(name "ncdu2") ; To destinguish it from the C based version.
(inherit ncdu-1)
(name "ncdu")
(version "2.2.1")
(source (origin
(method url-fetch)
@ -66,12 +69,19 @@ ncurses installed.")
version ".tar.gz"))
(sha256
(base32
"0hfimrr7z9zrfkiyj09i8nh4a1rjn7d00y9xzpc7mkyqpkvghjjy"))))
"0hfimrr7z9zrfkiyj09i8nh4a1rjn7d00y9xzpc7mkyqpkvghjjy"))
(modules '((guix build utils)))
(snippet
#~(begin
;; Delete a pregenerated man page. We'll build it ourselves.
(delete-file "ncdu.1")))))
(arguments
(list
#:make-flags
#~(list (string-append "PREFIX=" #$output)
(string-append "CC=" #$(cc-for-target)))
(string-append "CC=" #$(cc-for-target))
;; XXX By default, zig builds with -march=native!
(string-append "ZIG_FLAGS=-Drelease-fast -Dcpu=baseline"))
#:phases
#~(modify-phases %standard-phases
(delete 'configure) ; No configure script.
@ -81,12 +91,13 @@ ncurses installed.")
(mkdtemp "/tmp/zig-cache-XXXXXX"))))
(add-after 'build 'build-manpage
(lambda _
(delete-file "ncdu.1")
(invoke "make" "doc")))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "zig" "test" "build.zig")))))))
(native-inputs
(list perl zig))
(properties `((upstream-name . "ncdu")))))
(list perl zig))))
(define-public ncdu-2
(deprecated-package "ncdu2" ncdu))

32
gnu/packages/networking.scm
View file

@ -196,7 +196,7 @@ runs on top of IP or UDP, and supports both v4 and v6 versions.")
(define-public arp-scan
(package
(name "arp-scan")
(version "1.9.7")
(version "1.9.8")
(source
(origin
(method git-fetch)
@ -206,7 +206,7 @@ runs on top of IP or UDP, and supports both v4 and v6 versions.")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "1mf7a4f9vzvnkiavc87aqyciswggsb4fpy7j05jxnvjyyxv3l7gp"))))
(base32 "18pck3hi7caykpkry5ri16w4w8m11g8gvh3qx5rhwsc6d9xa2a6d"))))
(build-system gnu-build-system)
(inputs
(list libpcap))
@ -1754,14 +1754,14 @@ of the same name.")
(define-public wireshark
(package
(name "wireshark")
(version "4.0.1")
(version "4.0.2")
(source
(origin
(method url-fetch)
(uri (string-append "https://www.wireshark.org/download/src/wireshark-"
version ".tar.xz"))
(sha256
(base32 "1hpxkw0ww6b8fnda5bhgpma2836bfarpxgnkkrzz9fqkkpwh5c5k"))))
(base32 "07a18jx88jaa2j1i949w9n1yb149xi02s80inbfji6rgkxliangk"))))
(build-system cmake-build-system)
(arguments
`(#:phases
@ -1966,15 +1966,15 @@ transmission protocol (SCTP) in a Go application.")
(base32
"1y7sbgkhgadmd93x1zafqc4yp26ssiv16ni5bbi9vmvvdl55m29y"))))
(build-system gnu-build-system)
(arguments
(list #:make-flags
#~(list (string-append "CC=" #$(cc-for-target))
(string-append "PREFIX=" #$output))
#:tests? #f)) ; no test suite
(native-inputs
`(("gettext" ,gettext-minimal)))
(list gettext-minimal))
(inputs
(list fftw ncurses openssl))
(arguments
`(#:make-flags (list ,(string-append "CC=" (cc-for-target))
(string-append "DESTDIR=" (assoc-ref %outputs "out"))
"PREFIX=")
#:tests? #f)) ; no tests
(home-page "https://www.vanheusden.com/httping/")
(synopsis "Web server latency and throughput monitor")
(description
@ -2760,7 +2760,7 @@ procedure calls (RPCs).")
(define-public openvswitch
(package
(name "openvswitch")
(version "3.0.1")
(version "3.0.3")
(source (origin
(method url-fetch)
(uri (string-append
@ -2768,7 +2768,7 @@ procedure calls (RPCs).")
version ".tar.gz"))
(sha256
(base32
"0s5xbcchnfqlgrabjs76bwd5d6qhvjx352r274r5p7wis0b1g8g4"))))
"0qwlpnwjcyb7fpw6yp65mdqg20i1851z70xmvzxwxwpifq56a1pm"))))
(build-system gnu-build-system)
(arguments
'(#:configure-flags
@ -3852,14 +3852,14 @@ protocol daemons for BGP, IS-IS, LDP, OSPF, PIM, and RIP.")
(define-public bird
(package
(name "bird")
(version "2.0.10")
(version "2.0.11")
(source (origin
(method url-fetch)
(uri (string-append "ftp://bird.network.cz/pub/bird/bird-"
version ".tar.gz"))
(sha256
(base32
"0npx3zgbjnhm4905zmj2qkz3d13s8hakassq6sbzm1ywv3fl3lvy"))))
"1mjm7w5zkbc5q2v4bdn7mcqzcq94s7fiz8a5lz98kl5rcwxvi9v0"))))
(inputs
(list libssh readline))
(native-inputs
@ -4257,14 +4257,14 @@ realistic with today's hardware.")
(define-public lldpd
(package
(name "lldpd")
(version "1.0.15")
(version "1.0.16")
(source
(origin
(method url-fetch)
(uri (string-append "https://media.luffy.cx/files/lldpd/lldpd-"
version ".tar.gz"))
(sha256
(base32 "09iidaan6gq384n7ykdwwsll3vmq6q7zd7j7j721k2p91c9kmzpp"))
(base32 "1ab5hkgi2iwqpfw6xy2wxjhqmz6pnkynfkg85zm7r9kv1ijr3cz3"))
(modules '((guix build utils)))
(snippet
'(begin

587
gnu/packages/ocaml.scm
View file

@ -185,6 +185,67 @@ OCaml and can effectively bootstrap OCaml 4.07.
This package produces a native @command{ocamlc} and a bytecode @command{ocamllex}.")
(license license:expat))))
(define-public ocaml-5.0
(package
(name "ocaml")
(version "5.0.0")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/ocaml/ocaml")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"1p0p8wldrnbr61wfy3x4122017g4k5gjvfwlg3mvlqn8r2fxn2m5"))))
(build-system gnu-build-system)
(native-search-paths
(list (search-path-specification
(variable "OCAMLPATH")
(files (list "lib/ocaml" "lib/ocaml/site-lib")))
(search-path-specification
(variable "CAML_LD_LIBRARY_PATH")
(files (list "lib/ocaml/site-lib/stubslibs"
"lib/ocaml/site-lib/stublibs")))))
(native-inputs
(list perl pkg-config))
(inputs
(list libx11 libiberty ;needed for objdump support
zlib)) ;also needed for objdump support
(arguments
`(#:configure-flags '("--enable-ocamltest")
#:test-target "tests"
#:make-flags '("world.opt")
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch-/bin/sh-references
(lambda* (#:key inputs #:allow-other-keys)
(let* ((sh (search-input-file inputs "/bin/sh"))
(quoted-sh (string-append "\"" sh "\"")))
(with-fluids ((%default-port-encoding #f))
(for-each
(lambda (file)
(substitute* file
(("\"/bin/sh\"")
(begin
(format (current-error-port) "\
patch-/bin/sh-references: ~a: changing `\"/bin/sh\"' to `~a'~%"
file quoted-sh)
quoted-sh))))
(find-files "." "\\.ml$")))))))))
(home-page "https://ocaml.org/")
(synopsis "The OCaml programming language")
(description
"OCaml is a general purpose industrial-strength programming language with
an emphasis on expressiveness and safety. Developed for more than 20 years at
Inria it benefits from one of the most advanced type systems and supports
functional, imperative and object-oriented styles of programming.")
;; The compiler is distributed under qpl1.0 with a change to choice of
;; law: the license is governed by the laws of France. The library is
;; distributed under lgpl2.0.
(license (list license:qpl license:lgpl2.0))))
(define-public ocaml-4.14
(package
(name "ocaml")
@ -880,7 +941,7 @@ name = Guix Builder")
("ocaml-cppo" ,ocaml-cppo)
;; For tests.
("git" ,git-minimal)
("git" ,git-minimal/fixed)
("openssl" ,openssl)
("python" ,python-wrapper)
("rsync" ,rsync)
@ -901,10 +962,12 @@ name = Guix Builder")
("opam-repo-f372039d" ,(opam-repo "f372039db86a970ef3e662adbfe0d4f5cd980701"
"0ld7fcry6ss6fmrpswvr6bikgx299w97h0gwrjjh7kd7rydsjdws")))))
(inputs
(list ocaml ncurses curl bubblewrap))
(propagated-inputs
(list ocaml-cmdliner ocaml-dose3 ocaml-mccs ocaml-opam-file-format
ocaml-re))
(list ocaml ncurses curl bubblewrap ocaml-cmdliner ocaml-dose3
ocaml-mccs ocaml-opam-file-format ocaml-re))
(properties
;; OPAM is used as a tool and not as a library, we can use the OCaml 4.14
;; compiled opam until opam is compatible with OCaml 5.0.
`((ocaml5.0-variant . ,(delay opam))))
(home-page "http://opam.ocamlpro.com/")
(synopsis "Package manager for OCaml")
(description
@ -1343,14 +1406,14 @@ to the other.")
(define-public ocaml-findlib
(package
(name "ocaml-findlib")
(version "1.9.3")
(version "1.9.5")
(source (origin
(method url-fetch)
(uri (string-append "http://download.camlcity.org/download/"
"findlib" "-" version ".tar.gz"))
(sha256
(base32
"0hfcwamcvinmww59b5i4yxbf0kxyzkp5qv3d1c7ybn9q52vgq463"))))
"0w9578j1561f5gi51sn2jgxm3kh3sn88cpannhdkqcdg1kk08iqd"))))
(build-system gnu-build-system)
(native-inputs
(list m4 ocaml))
@ -1405,6 +1468,13 @@ compilers that can directly deal with packages.")
(native-inputs
(list m4 ocaml-4.09))))
(define-public ocaml5.0-findlib
(package
(inherit ocaml-findlib)
(name "ocaml5.0-findlib")
(native-inputs
(list m4 ocaml-5.0))))
(define-public ocaml-ounit2
(package
(name "ocaml-ounit2")
@ -1618,7 +1688,7 @@ archive(native) = \"frontc.cmxa\""))))
(define-public ocaml-qcheck
(package
(name "ocaml-qcheck")
(version "0.18.1")
(version "0.20")
(source
(origin
(method git-fetch)
@ -1627,12 +1697,12 @@ archive(native) = \"frontc.cmxa\""))))
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0g3r8lrw6fsdphgpnp08saxyxk1vd3chpmb564ir2qnsp716vz6z"))))
(base32 "1r0m5p1dd06lbgfxqdpl1ya4vb8252z7hqkvdi9k444g4rx2ay3p"))))
(build-system dune-build-system)
(arguments
`(#:test-target "."))
(propagated-inputs
(list ocaml-alcotest ocaml-ounit))
(list ocaml-alcotest ocaml-ounit ocaml-ppxlib))
(native-inputs
(list ocamlbuild))
(properties `((ocaml4.07-variant . ,(delay ocaml4.07-qcheck))))
@ -1752,6 +1822,9 @@ following a very simple s-expression syntax.")
(define ocaml4.09-dune-bootstrap
(package-with-ocaml4.09 dune-bootstrap))
(define ocaml5.0-dune-bootstrap
(package-with-ocaml5.0 dune-bootstrap))
(define-public dune-configurator
(package
(inherit dune-bootstrap)
@ -1772,7 +1845,8 @@ following a very simple s-expression syntax.")
(delete-file-recursively "vendor/pp"))))))
(propagated-inputs
(list ocaml-csexp))
(properties `((ocaml4.09-variant . ,(delay ocaml4.09-dune-configurator))))
(properties `((ocaml4.09-variant . ,(delay ocaml4.09-dune-configurator))
(ocaml5.0-variant . ,(delay ocaml5.0-dune-configurator))))
(synopsis "Dune helper library for gathering system configuration")
(description "Dune-configurator is a small library that helps writing
OCaml scripts that test features available on the system, in order to generate
@ -1797,13 +1871,25 @@ config.h files for instance. Among other things, dune-configurator allows one t
(propagated-inputs
`(("ocaml-csexp" ,ocaml4.09-csexp)))))
(define-public ocaml5.0-dune-configurator
(package
(inherit dune-configurator)
(name "ocaml5.0-dune-configurator")
(arguments
`(,@(package-arguments dune-configurator)
#:dune ,ocaml5.0-dune-bootstrap
#:ocaml ,ocaml-5.0
#:findlib ,ocaml5.0-findlib))
(propagated-inputs (list ocaml5.0-csexp))))
(define-public dune
(package
(inherit dune-bootstrap)
(propagated-inputs
(list dune-configurator))
(properties `((ocaml4.07-variant . ,(delay ocaml4.07-dune))
(ocaml4.09-variant . ,(delay ocaml4.09-dune))))))
(ocaml4.09-variant . ,(delay ocaml4.09-dune))
(ocaml5.0-variant . ,(delay ocaml5.0-dune))))))
(define-public ocaml4.09-dune
(package
@ -1825,6 +1911,12 @@ config.h files for instance. Among other things, dune-configurator allows one t
(base32
"0l4x0x2fz135pljv88zj8y6w1ninsqw0gn1mdxzprd6wbxbyn8wr"))))))
(define-public ocaml5.0-dune
(package
(inherit ocaml5.0-dune-bootstrap)
(propagated-inputs
(list ocaml5.0-dune-configurator))))
(define-public ocaml-csexp
(package
(name "ocaml-csexp")
@ -1850,7 +1942,8 @@ config.h files for instance. Among other things, dune-configurator allows one t
#t)))))
(propagated-inputs
(list ocaml-result))
(properties `((ocaml4.09-variant . ,(delay ocaml4.09-csexp))))
(properties `((ocaml4.09-variant . ,(delay ocaml4.09-csexp))
(ocaml5.0-variant . ,(delay ocaml5.0-csexp))))
(home-page "https://github.com/ocaml-dune/csexp")
(synopsis "Parsing and printing of S-expressions in Canonical form")
(description "This library provides minimal support for Canonical
@ -1879,6 +1972,18 @@ module of this library is parameterised by the type of S-expressions.")
(propagated-inputs
`(("ocaml-result" ,ocaml4.09-result)))))
(define-public ocaml5.0-csexp
(package
(inherit ocaml-csexp)
(name "ocaml5.0-csexp")
(arguments
`(#:ocaml ,ocaml-5.0
#:findlib ,ocaml5.0-findlib
,@(substitute-keyword-arguments (package-arguments ocaml-csexp)
((#:dune _) ocaml5.0-dune-bootstrap))))
(propagated-inputs
`(("ocaml-result" ,ocaml5.0-result)))))
(define-public ocaml-migrate-parsetree
(package
(name "ocaml-migrate-parsetree")
@ -2064,7 +2169,8 @@ bitsrings in Erlang style as primitives to the language.")))
(arguments
`(#:test-target "."
#:dune ,dune-bootstrap))
(properties `((ocaml4.09-variant . ,(delay ocaml4.09-result))))
(properties `((ocaml4.09-variant . ,(delay ocaml4.09-result))
(ocaml5.0-variant . ,(delay ocaml5.0-result))))
(home-page "https://github.com/janestreet/result")
(synopsis "Compatibility Result module")
(description "Uses the new result type defined in OCaml >= 4.03 while
@ -2081,6 +2187,16 @@ defined in this library.")
#:dune ,ocaml4.09-dune-bootstrap
#:ocaml ,ocaml-4.09
#:findlib ,ocaml4.09-findlib))))
(define-public ocaml5.0-result
(package
(inherit ocaml-result)
(name "ocaml5.0-result")
(arguments
`(#:test-target "."
#:dune ,ocaml5.0-dune-bootstrap
#:ocaml ,ocaml-5.0
#:findlib ,ocaml5.0-findlib))))
(define-public ocaml-topkg
(package
@ -2607,6 +2723,207 @@ for mapping files in memory. This function is the same as the
@command{Unix.map_file} function added in OCaml >= 4.06.")
(license (list license:qpl license:lgpl2.0))))
(define-public ocaml-psq
(package
(name "ocaml-psq")
(version "0.2.1")
(home-page "https://github.com/pqwy/psq")
(source
(origin
(method git-fetch)
(uri (git-reference
(url home-page)
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256 (base32
"0ahxbzkbq5sw8sqv31c2lil2zny4076q8b0dc7h5slq7i2r23d79"))))
(build-system dune-build-system)
(native-inputs (list ocaml-qcheck ocaml-alcotest))
(synopsis "Functional Priority Search Queues for OCaml")
(description
"This library provides Functional Priority Search Queues for OCaml.
Typical applications are searches, schedulers and caches.")
(license license:isc)))
(define-public ocaml-optint
(package
(name "ocaml-optint")
(version "0.3.0")
(home-page "https://github.com/mirage/optint")
(source
(origin
(method git-fetch)
(uri (git-reference
(url home-page)
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256 (base32
"1qj32bcw1in7s6raxdvbmjr3lvj99iwv98x1ar9cwxp4zf8ybfss"))))
(build-system dune-build-system)
(arguments `(#:test-target "."))
(native-inputs (list ocaml-crowbar ocaml-monolith ocaml-fmt))
(synopsis "Efficient integer types on 64-bit architectures for OCaml")
(description
"This OCaml library provides two new integer types, @code{Optint.t} and
@code{Int63.t}, which guarantee efficient representation on 64-bit
architectures and provide a best-effort boxed representation on 32-bit
architectures.")
(license license:isc)))
(define-public ocaml-hmap
(package
(name "ocaml-hmap")
(version "0.8.1")
(source
(origin
(method url-fetch)
(uri "https://erratique.ch/software/hmap/releases/hmap-0.8.1.tbz")
(sha256
(base32 "10xyjy4ab87z7jnghy0wnla9wrmazgyhdwhr4hdmxxdn28dxn03a"))))
(build-system ocaml-build-system)
(arguments
`(#:build-flags
(list "build" "--tests" "true")
#:phases
(modify-phases %standard-phases
(delete 'configure))))
(native-inputs (list ocaml-topkg ocamlbuild opam))
(home-page "https://erratique.ch/software/hmap")
(synopsis "Heterogeneous value maps for OCaml")
(description
"Hmap provides heterogeneous value maps for OCaml. These maps bind keys to
values with arbitrary types. Keys witness the type of the value they are bound
to which allows adding and looking up bindings in a type safe manner.")
(license license:isc)))
(define ocaml-eio
(package
(name "ocaml-eio")
(version "0.7")
(home-page "https://github.com/ocaml-multicore/eio")
(source
(origin
(method git-fetch)
(uri (git-reference
(url home-page)
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256 (base32
"118raxdwv6pn5b152ffdhmwdi0l4wlwflcj2nmckfmm7v1z2fq4s"))))
(build-system dune-build-system)
(arguments `(#:package "eio"
#:test-target "."))
(propagated-inputs (list ocaml-bigstringaf
ocaml-cstruct
ocaml-lwt
ocaml-lwt-dllist
ocaml-logs
ocaml-optint
ocaml-psq
ocaml-fmt
ocaml-hmap
ocaml-mtime
ocaml-odoc))
(native-inputs (list ocaml-astring ocaml-crowbar ocaml-alcotest))
(synopsis "Effect-based direct-style IO API for OCaml")
(description "This package provides an effect-based IO API for multicore
OCaml with fibers.")
(license license:isc)))
(define-public ocaml5.0-eio
(package-with-ocaml5.0 ocaml-eio))
(define ocaml-eio-luv
(package
(inherit ocaml-eio)
(name "ocaml-eio-luv")
(arguments `(#:package "eio_luv"
#:test-target "."))
(propagated-inputs (list ocaml-eio ocaml-luv))
(native-inputs (list ocaml-mdx))
(synopsis "Libuv-based backend for Ocaml Eio")
(description "@code{Eio_luv} provides a cross-platform backend for
@code{Ocaml Eio}'s APIs using luv (libuv)")))
(define-public ocaml5.0-eio-luv
(package-with-ocaml5.0 ocaml-eio-luv))
(define-public ocaml-uring
(package
(name "ocaml-uring")
(version "0.4")
(home-page "https://github.com/ocaml-multicore/ocaml-uring")
(source
(origin
(method git-fetch)
(uri (git-reference
(url home-page)
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256 (base32
"0k70y7nb2wrk2yql0pwnrhsp1x7k9ld4gd8iihbv6r34kcm3a5m1"))))
(build-system dune-build-system)
(arguments `(#:test-target "."))
(propagated-inputs
(list ocaml-cstruct
ocaml-fmt
ocaml-optint))
(native-inputs
(list ocaml-lwt
ocaml-bechamel
ocaml-logs
ocaml-cmdliner
ocaml-mdx))
(synopsis "OCaml bindings for Linux io_uring")
(description "This package provides OCaml bindings to the Linux
@code{io_uring} kernel IO interfaces.")
(license
(list license:isc license:expat))))
(define ocaml-eio-linux
(package
(inherit ocaml-eio)
(name "ocaml-eio-linux")
(arguments `(#:package "eio_linux"
#:test-target "."))
(propagated-inputs
(list ocaml-eio
ocaml-uring
ocaml-logs
ocaml-fmt))
(native-inputs
(list ocaml-mdx
ocaml-alcotest
ocaml-mdx))
(synopsis "Linux backend for ocaml-eio")
(description "@code{Eio_linux} provides a Linux io-uring backend for
@code{Ocaml Eio} APIs, plus a low-level API that can be used directly
(in non-portable code).")))
(define-public ocaml5.0-eio-linux
(package-with-ocaml5.0 ocaml-eio-linux))
(define ocaml-eio-main
(package
(inherit ocaml-eio)
(name "ocaml-eio-main")
(arguments `(#:package "eio_main"
#:test-target "."
;; tests require network
#:tests? #f))
(propagated-inputs
(list ocaml-eio
ocaml-eio-luv
ocaml-eio-linux))
(native-inputs
(list ocaml-mdx))
(synopsis "Eio backend selector")
(description "@code{Eio_main} selects an appropriate backend (e.g.
@samp{eio_linux} or @samp{eio_luv}), depending on your platform.")))
(define-public ocaml5.0-eio-main
(package-with-ocaml5.0 ocaml-eio-main))
(define-public ocaml-lwt
(package
(name "ocaml-lwt")
@ -2637,6 +2954,27 @@ process. Also, in many cases, Lwt threads can interact without the need for
locks or other synchronization primitives.")
(license license:lgpl2.1)))
(define-public ocaml-lwt-dllist
(package
(name "ocaml-lwt-dllist")
(version "1.0.1")
(home-page "https://github.com/mirage/lwt-dllist")
(source (origin
(method git-fetch)
(uri (git-reference
(url home-page)
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"18bi8fb4yly1pyf43pjvvdhlyzb3wkgxifffx9d1g9y2mwsng6jw"))))
(build-system dune-build-system)
(native-inputs (list ocaml-lwt))
(synopsis "OCaml library providing mutable doubly-linked list with Lwt iterators")
(description "This OCaml library provides an implementation of a mutable
doubly-linked list with Lwt iterators.")
(license license:expat)))
(define-public ocaml-luv
(package
(name "ocaml-luv")
@ -3400,6 +3738,30 @@ your functions and to easily compare the results. A statistical test
is used to determine whether the results truly differ.")
(license license:lgpl3+)))
(define-public ocaml-bechamel
(package
(name "ocaml-bechamel")
(version "0.3.0")
(home-page "https://github.com/mirage/bechamel")
(source
(origin
(method git-fetch)
(uri (git-reference
(url home-page)
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1x7sf45iy5dzx7kknbkkvpna42rcwpj5p55y0nqsg2fb4srj0b1q"))))
(build-system dune-build-system)
(arguments `(#:package "bechamel"))
(propagated-inputs (list ocaml-fmt ocaml-stdlib-shims))
(synopsis "Yet Another Benchmark in OCaml")
(description
"BEnchmark for a CHAMEL/camel/caml which is agnostic to the system. It's a
micro-benchmark tool for OCaml which lets the user to re-analyzes and prints
samples.")
(license license:expat)))
(define-public ocaml-batteries
(package
(name "ocaml-batteries")
@ -4590,6 +4952,7 @@ long and size_t whose sizes depend on the host platform.")
("integers" ,ocaml-integers)))
(inputs
(list libffi))
(properties `((ocaml5.0-variant . ,(delay ocaml5.0-ctypes))))
(synopsis "Library for binding to C libraries using pure OCaml")
(description "Ctypes is a library for binding to C libraries using pure
OCaml. The primary aim is to make writing C extensions as straightforward as
@ -4600,6 +4963,33 @@ functions that you want to call, then bind directly to those functions -- all
without writing or generating any C!")
(license license:expat)))
(define-public ocaml5.0-ctypes
;; Contains fix to support OCaml 5.0
;; (https://github.com/ocamllabs/ocaml-ctypes/pull/709)
(let ((commit "52ff621f47dbc1ee5a90c30af0ae0474549946b4")
(revision "0"))
(package-with-ocaml5.0
(package
(inherit ocaml-ctypes)
(name "ocaml-ctypes")
(version (git-version "0.20.1" revision commit))
(home-page "https://github.com/ocamllabs/ocaml-ctypes")
(arguments
(append
;; Some tests fail. Failure seems to be due to OCaml 5.0.
`(#:tests? #f)
(package-arguments ocaml-ctypes)))
(source (origin
(method git-fetch)
(uri (git-reference
(url home-page)
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"0vyiryqchz0mdfhal7bdivqsk5yhvzzckrqv495rlpbdxzklcp7g"))))
(properties '())))))
(define-public ocaml-ocb-stubblr
(package
(name "ocaml-ocb-stubblr")
@ -4979,7 +5369,7 @@ serializers and deserializers from type definitions.")
(define-public ocaml-merlin-lib
(package
(name "ocaml-merlin-lib")
(version "4.6-414")
(version "4.7-414")
(source
(origin
(method git-fetch)
@ -4989,17 +5379,39 @@ serializers and deserializers from type definitions.")
(file-name (git-file-name name version))
(sha256
(base32
"1cpa9x45w54l4mqqmc8z3s5gscggw37gb6z9i7wwss86fj1wgclh"))))
"1bd4j2zq0lyszbkibgky1z9swv4scb7ljww3fv1kqy0cya743b5l"))))
(build-system dune-build-system)
(arguments '(#:package "merlin-lib"
#:tests? #f)) ; no tests
(propagated-inputs (list ocaml-csexp ocaml-menhir))
(properties `((ocaml5.0-variant . ,(delay ocaml5.0-merlin-lib))))
(home-page "https://ocaml.github.io/merlin/")
(synopsis "Merlin libraries")
(description "These libraries provides access to low-level compiler
interfaces and the standard higher-level merlin protocol.")
(license license:expat)))
;; the 500 indicates that this version is for OCaml 5.0
(define ocaml-merlin-lib-500
(package
(inherit ocaml-merlin-lib)
(name "ocaml-merlin-lib")
(version "4.7.1-500")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/ocaml/merlin")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"05a87i2dkzv800nwb6y7b2j45avg8gs3gzb5a98wrj1i5zjqwh01"))))
(properties '())))
(define-public ocaml5.0-merlin-lib
(package-with-ocaml5.0 ocaml-merlin-lib-500))
(define-public ocaml-dot-merlin-reader
(package
(inherit ocaml-merlin-lib)
@ -5007,10 +5419,23 @@ interfaces and the standard higher-level merlin protocol.")
(arguments '(#:package "dot-merlin-reader"
#:tests? #f)) ; no tests
(propagated-inputs (list ocaml-merlin-lib))
(properties `((ocaml5.0-variant . ,(delay ocaml5.0-dot-merlin-reader))))
(synopsis "Reads config files for @code{ocaml-merlin}")
(description "@code{ocaml-dot-merlin-reader} is an external reader for
@code{ocaml-merlin} configurations.")))
(define-public ocaml5.0-dot-merlin-reader
(package-with-ocaml5.0
(package
(inherit ocaml-merlin-lib-500)
(name "ocaml-dot-merlin-reader")
(arguments '(#:package "dot-merlin-reader"
#:tests? #f)) ; no tests
(propagated-inputs (list ocaml5.0-merlin-lib))
(synopsis "Reads config files for @code{ocaml-merlin}")
(description "@code{ocaml-dot-merlin-reader} is an external reader for
@code{ocaml-merlin} configurations."))))
(define-public ocaml-merlin
(package
(inherit ocaml-dot-merlin-reader)
@ -5024,9 +5449,12 @@ interfaces and the standard higher-level merlin protocol.")
(when tests?
(invoke "dune" "runtest" "-p" "merlin,dot-merlin-reader")))))))
(propagated-inputs (list ocaml-merlin-lib ocaml-yojson))
(properties `((ocaml5.0-variant . ,(delay ocaml5.0-merlin))))
(native-inputs
(list ocaml-dot-merlin-reader ; required for tests
ocaml-mdx jq))
ocaml-ppxlib
ocaml-mdx
jq))
(synopsis "Context sensitive completion for OCaml in Vim and Emacs")
(description "Merlin is an editor service that provides modern IDE
features for OCaml. Emacs and Vim support is provided out-of-the-box.
@ -5034,6 +5462,32 @@ External contributors added support for Visual Studio Code, Sublime Text and
Atom.")
(license license:expat)))
(define-public ocaml5.0-merlin
(package-with-ocaml5.0
(package
(inherit ocaml-merlin-lib-500)
(name "ocaml-merlin")
(arguments
'(#:package "merlin"
#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "dune" "runtest" "-p" "merlin,dot-merlin-reader")))))))
(propagated-inputs (list ocaml-merlin-lib ocaml-yojson))
(native-inputs
(list ocaml-dot-merlin-reader ; required for tests
ocaml-ppxlib
ocaml-mdx
jq))
(synopsis "Context sensitive completion for OCaml in Vim and Emacs")
(description "Merlin is an editor service that provides modern IDE
features for OCaml. Emacs and Vim support is provided out-of-the-box.
External contributors added support for Visual Studio Code, Sublime Text and
Atom.")
(license license:expat))))
(define-public ocaml-gsl
(package
(name "ocaml-gsl")
@ -5298,7 +5752,8 @@ functionality for parsing and pretty-printing s-expressions.")
(build-system dune-build-system)
(propagated-inputs
(list ocaml-sexplib0))
(properties `((ocaml4.07-variant . ,(delay ocaml4.07-base))))
(properties `((ocaml4.07-variant . ,(delay ocaml4.07-base))
(ocaml5.0-variant . ,(delay ocaml5.0-base))))
(synopsis
"Full standard library replacement for OCaml")
(description
@ -5313,6 +5768,28 @@ provided by companion libraries such as
@url{https://github.com/janestreet/stdio, ocaml-stdio}.")
(license license:expat)))
(define-public ocaml5.0-base
;; This version contains fixes for OCaml 5.0
;; (see https://github.com/ocaml/opam-repository/pull/21851)
(let ((commit "423dbad212f55506767d758b1ceb2d6e0ee8e7f5")
(revision "0"))
(package-with-ocaml5.0
(package
(inherit ocaml-base)
(name "ocaml-base")
(version (git-version "0.15.0" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/kit-ty-kate/base")
(commit commit)))
(file-name (git-file-name "ocaml5.0-base" version))
(sha256
(base32
"15vsiv3q53l1bzrvqgspf3lp2104s9dzw62z3nl75f53jvjvsyf6"))))
(properties '())))))
(define-public ocaml4.07-base
(package-with-ocaml4.07
(package
@ -5465,7 +5942,7 @@ as part of the same ocaml-migrate-parsetree driver.")
(define-public ocaml-ppxlib
(package
(name "ocaml-ppxlib")
(version "0.25.0")
(version "0.25.1")
(home-page "https://github.com/ocaml-ppx/ppxlib")
(source
(origin
@ -5476,7 +5953,7 @@ as part of the same ocaml-migrate-parsetree driver.")
(file-name (git-file-name name version))
(sha256
(base32
"0wlqvyqy9ccp7z981blv42aqwq7zfq93cakbahjyy48hiiir6vp2"))))
"1402fzv5mg5grf3hb82fqsdkzxk07yfp9hvjh33dzjwjsqfhx3wi"))))
(build-system dune-build-system)
(arguments
`(#:phases
@ -6545,7 +7022,8 @@ useful errors on failure.")
ocaml-migrate-parsetree
ocaml-re))
(properties `((upstream-name . "ppx_expect")
(ocaml4.07-variant . ,(delay ocaml4.07-ppx-expect))))
(ocaml4.07-variant . ,(delay ocaml4.07-ppx-expect))
(ocaml5.0-variant . ,(delay ocaml5.0-ppx-expect))))
(home-page "https://github.com/janestreet/ppx_expect")
(synopsis "Cram like framework for OCaml")
(description "Expect-test is a framework for writing tests in OCaml, similar
@ -6555,6 +7033,28 @@ output-generating code, interleaved with @code{%expect} extension expressions
to denote the expected output.")
(license license:asl2.0)))
(define-public ocaml5.0-ppx-expect
;; Contains fixes for OCaml 5.0
;; (https://github.com/janestreet/ppx_expect/pull/39/).
(let ((commit "83edfc1ee779e8dcdd975e26715c2e688326befa")
(revision "0"))
(package-with-ocaml5.0
(package
(inherit ocaml-ppx-expect)
(name "ocaml-ppx-expect")
(version (git-version "0.15.0" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/janestreet/ppx_expect")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"05r7wlmrhb5biwyw6bjcpmr77srglijcbf7nm7h2hiil0d0i7bkz"))))
(properties '())))))
(define-public ocaml4.07-ppx-expect
(package-with-ocaml4.07
(package
@ -7573,9 +8073,7 @@ then run the Bisect_ppx report tool on the generated visitation files.")
(define-public ocaml-odoc
(package
(name "ocaml-odoc")
;; 2.2.0-alpha contains fixes for Dune 3.0 compatibility
;; (https://github.com/ocaml/odoc/commit/6ac97f3148f7791ec7451785ef4dbd9ca0daf2d1)
(version "2.2.0-alpha")
(version "2.2.0")
(source
(origin
(method git-fetch)
@ -7584,7 +8082,7 @@ then run the Bisect_ppx report tool on the generated visitation files.")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "07zjkk455l51i29lcayzrc1q8j5bvbv97sscv8yhcj7x6h6q2nag"))))
(base32 "19mww1lyrdi705aw3lwql6xc7p11fcq5gprmhyxpb4x80gnvlzrh"))))
(build-system dune-build-system)
(arguments
`(#:tests? #f; not compatible with current version of ocaml-yojson
@ -7836,7 +8334,7 @@ variants.")
(("`") "'")
(("COMMAND") "[COMMAND]")
(("\\.\\.\\.") "…")))))))
(inputs
(propagated-inputs
(list ocaml-fmt
ocaml-astring
ocaml-logs
@ -8205,7 +8703,8 @@ defined in OCaml 4.12.0.")
ocaml-uuseg
ocaml-uutf))
(native-inputs
(list git-minimal ocaml-alcotest ocaml-ocp-indent ocaml-bisect-ppx))
(list git-minimal/fixed ;for tests
ocaml-alcotest ocaml-ocp-indent ocaml-bisect-ppx))
(home-page "https://github.com/ocaml-ppx/ocamlformat")
(synopsis "Auto-formatter for OCaml code")
(description "OCamlFormat is a tool to automatically format OCaml code in
@ -8527,6 +9026,31 @@ Using this package, you can run afl-fuzz in ``persistent mode'', which avoids
repeated forking and is much faster.")
(license license:expat)))
(define-public ocaml-monolith
(package
(name "ocaml-monolith")
(version "20210525")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://gitlab.inria.fr/fpottier/monolith")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"1b6jj4ivl9ni8kba7wls4xsqdy8nm7q9mnx9347jvb99dmmlj5mc"))))
(build-system dune-build-system)
(arguments `(#:test-target "."))
(propagated-inputs (list ocaml-afl-persistent ocaml-pprint ocaml-seq))
(home-page "https://gitlab.inria.fr/fpottier/monolith")
(synopsis "Framework for testing an OCaml library using afl-fuzz")
(description "Monolith offers facilities for testing an OCaml library (for
instance, a data structure implementation) by comparing it against a reference
implementation. It can be used to perform either random testing or fuzz
testing by using the @code{afl-fuzz} tool.")
(license license:lgpl3+)))
(define-public ocaml-pprint
(package
(name "ocaml-pprint")
@ -8581,12 +9105,21 @@ document and by the text width.")
ocaml-uunf
ocaml-uutf
ocaml-pprint))
(properties `((ocaml5.0-variant . ,(delay ocaml5.0-crowbar))))
(synopsis "Ocaml library for tests, let a fuzzer find failing cases")
(description "Crowbar is a library for testing code, combining
QuickCheck-style property-based testing and the magical bug-finding powers of
@uref{http://lcamtuf.coredump.cx/afl/, afl-fuzz}.")
(license license:expat)))
(define-public ocaml5.0-crowbar
(package-with-ocaml5.0
(package
(inherit ocaml-crowbar)
;; Tests require ocaml-calendar which does not work with OCaml 5.0
(arguments `(#:tests? #f))
(properties '()))))
(define-public ocaml-eqaf
(package
(name "ocaml-eqaf")

9
gnu/packages/onc-rpc.scm
View file

@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2014, 2017, 2018 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2014, 2017, 2018, 2022 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2016 John Darrington <jmd@gnu.org>
;;; Copyright © 2017, 2018 Leo Famulari <leo@famulari.name>
;;; Copyright © 2018, 2021 Tobias Geerinckx-Rice <me@tobias.gr>
@ -27,6 +27,7 @@
#:use-module (guix licenses)
#:use-module (guix packages)
#:use-module (guix download)
#:use-module (guix gexp)
#:use-module (guix git-download)
#:use-module (gnu packages)
#:use-module (gnu packages autotools)
@ -84,9 +85,9 @@ IPv4 and IPv6. ONC RPC is notably used by the network file system (NFS).")
(substitute-keyword-arguments (package-arguments libtirpc)
((#:configure-flags flags ''())
;; When cross-building the target system's krb5-config should be used.
`(list (string-append "ac_cv_prog_KRB5_CONFIG="
(assoc-ref %build-inputs "mit-krb5")
"/bin/krb5-config")))))))
#~(list (string-append "ac_cv_prog_KRB5_CONFIG="
#$(this-package-input "mit-krb5")
"/bin/krb5-config")))))))
(define libtirpc/fixed
(package

276
gnu/packages/openldap.scm
View file

@ -2,7 +2,7 @@
;;; Copyright © 2013, 2014, 2015, 2019, 2020 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2013 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2016, 2021 Leo Famulari <leo@famulari.name>
;;; Copyright © 2017, 2018, 2019, 2021 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2017, 2018, 2019, 2021, 2022 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2019 Mathieu Othacehe <m.othacehe@gmail.com>
;;; Copyright © 2020 Lars-Dominik Braun <ldb@leibniz-psychology.org>
@ -30,6 +30,7 @@
#:use-module (gnu packages check)
#:use-module (gnu packages compression)
#:use-module (gnu packages cyrus-sasl)
#:use-module (gnu packages databases)
#:use-module (gnu packages dbm)
#:use-module (gnu packages documentation)
#:use-module (gnu packages gettext)
@ -58,6 +59,7 @@
#:use-module (guix gexp)
#:use-module (guix utils)
#:use-module (guix download)
#:use-module (guix git-download)
#:use-module (guix build-system gnu)
#:use-module (guix build-system python))
@ -126,7 +128,7 @@
(define-public openldap-2.6
(package
(inherit openldap)
(version "2.6.1")
(version "2.6.3")
(source (origin
(method url-fetch)
;; See <http://www.openldap.org/software/download/> for a list of
@ -142,7 +144,7 @@
"openldap-release/openldap-" version ".tgz")))
(sha256
(base32
"1wz6f3g3bbqgbbxs20zlappmmhapqbl791c0waibhz9djsk6wmwx"))))
"0ihddk8c6hg9lkjv0wk0w13g8kb75r8dfsn1n6b77mzk3pbs38nj"))))
(arguments
(substitute-keyword-arguments (package-arguments openldap)
((#:phases phases)
@ -244,155 +246,151 @@ servers from Python programs.")
(define-public 389-ds-base
(package
(name "389-ds-base")
(version "1.4.4.17")
;; More recent versions require rust. That's not bad, but it's a
;; challenge to integrate three build systems.
(version "2.2.2")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/389ds/389-ds-base/archive/"
"389-ds-base-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/389ds/389-ds-base")
(commit (string-append "389-ds-base-" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0i8m4crbnjjhfb7cq758rd0fxyz36i291yq6fykkprjykz9s3zv4"))))
"1sdvfbjfg0091f47562gw3gdc2vgvvhyhdi21lrpwnw9lqc8xdxk"))))
(build-system gnu-build-system)
(arguments
`(#:modules ((srfi srfi-1)
(list
#:modules '((srfi srfi-1)
(guix build gnu-build-system)
((guix build python-build-system)
#:select (add-installed-pythonpath python-version))
(guix build utils))
#:imported-modules ((guix build python-build-system)
#:imported-modules `((guix build python-build-system)
,@%gnu-build-system-modules)
#:configure-flags
(list (string-append "--with-db="
(assoc-ref %build-inputs "bdb"))
(string-append "--with-sasl="
(assoc-ref %build-inputs "cyrus-sasl"))
(string-append "--with-netsnmp="
(assoc-ref %build-inputs "net-snmp"))
(string-append "--with-pcre="
(assoc-ref %build-inputs "pcre"))
(string-append "--with-selinux="
(assoc-ref %build-inputs "libselinux"))
"--localstatedir=/var"
"--with-instconfigdir=/etc/dirsrv"
;; The Perl scripts are being removed in the 1.4.0 release.
;; Building them would require packaging of the outdated Mozilla
;; LDAP SDK (instead of OpenLDAP) and PerLDAP.
"--disable-perl")
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'fix-references
(lambda _
(substitute* "include/ldaputil/certmap.h"
(("nss3/cert.h") "nss/cert.h"))
(substitute* "src/lib389/lib389/utils.py"
(("'/sbin/ip'")
(string-append "'" (which "ip") "'")))
(substitute* "src/lib389/lib389/nss_ssl.py"
(("'/usr/bin/certutil'")
(string-append "'" (which "certutil") "'"))
(("'/usr/bin/openssl'")
(string-append "'" (which "openssl") "'"))
(("'/usr/bin/c_rehash'")
(string-append "'" (which "perl") "', '"
(which "c_rehash") "'")))))
(add-after 'unpack 'overwrite-default-locations
(lambda* (#:key outputs #:allow-other-keys)
(let ((out (assoc-ref outputs "out")))
(substitute* "src/lib389/lib389/paths.py"
(("/usr/share/dirsrv/inf/defaults.inf")
(string-append out "/share/dirsrv/inf/defaults.inf")))
;; This directory can only be specified relative to sysconfdir. This
;; is used to determine where to look for installed directory
;; servers, so in the absence of a search path it needs to be global.
(substitute* "ldap/admin/src/defaults.inf.in"
(("^initconfig_dir =.*")
"initconfig_dir = /etc/dirsrv/registry\n"))
;; This is used to determine where to write certificate files
;; when installing new directory server instances.
(substitute* '("src/lib389/lib389/instance/setup.py"
"src/lib389/lib389/instance/remove.py")
(("etc_dirsrv_path = .*")
"etc_dirsrv_path = '/etc/dirsrv/'\n")))))
(add-after 'unpack 'fix-install-location-of-python-tools
(lambda* (#:key inputs outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(pythondir (string-append
out "/lib/python"
(python-version (assoc-ref inputs "python"))
#:configure-flags
#~(list "--enable-cmocka"
(string-append "--with-db="
#$(this-package-input "bdb"))
(string-append "--with-netsnmp="
#$(this-package-input "net-snmp"))
(string-append "--with-selinux="
#$(this-package-input "libselinux"))
"--localstatedir=/var"
"--with-instconfigdir=/etc/dirsrv")
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'fix-references
(lambda _
;; Avoid dependency on systemd-detect-virt
(substitute* "src/lib389/lib389/instance/setup.py"
(("container_result = subprocess.*") "container_result = 1\n")
(("container_result.returncode") "container_result"))
(substitute* "ldap/servers/plugins/sync/sync_persist.c"
(("nspr4") "nspr"))
(substitute* "src/lib389/lib389/utils.py"
(("'/sbin/ip'")
(string-append "'" (which "ip") "'")))
(substitute* "src/lib389/lib389/nss_ssl.py"
(("'/usr/bin/certutil'")
(string-append "'" (which "certutil") "'"))
(("'/usr/bin/openssl'")
(string-append "'" (which "openssl") "'")))))
(add-after 'unpack 'overwrite-default-locations
(lambda _
(substitute* "src/lib389/lib389/paths.py"
(("/usr/share/dirsrv/inf/defaults.inf")
(string-append #$output "/share/dirsrv/inf/defaults.inf")))
;; This directory can only be specified relative to sysconfdir. This
;; is used to determine where to look for installed directory
;; servers, so in the absence of a search path it needs to be global.
(substitute* "ldap/admin/src/defaults.inf.in"
(("^initconfig_dir =.*")
"initconfig_dir = /etc/dirsrv/registry\n"))
;; This is used to determine where to write certificate files
;; when installing new directory server instances.
(substitute* "src/lib389/lib389/instance/setup.py"
(("etc_dirsrv_path = .*")
"etc_dirsrv_path = '/etc/dirsrv/'\n"))))
(add-after 'unpack 'fix-install-location-of-python-tools
(lambda* (#:key inputs outputs #:allow-other-keys)
(let ((pythondir (string-append
#$output "/lib/python"
(python-version #$(this-package-input "python"))
"/site-packages/")))
;; Install directory must be on PYTHONPATH.
(add-installed-pythonpath inputs outputs)
;; Install directory must exist.
(mkdir-p pythondir)
(substitute* "src/lib389/setup.py"
(("/usr") out))
(substitute* "Makefile.am"
(("setup.py install --skip-build" m)
(string-append
m " --prefix=" out
" --root=/ --single-version-externally-managed"))))))
(add-after 'build 'build-python-tools
(lambda* (#:key make-flags #:allow-other-keys)
;; Set DETERMINISTIC_BUILD to override the embedded mtime in pyc
;; files.
(setenv "DETERMINISTIC_BUILD" "1")
;; Use deterministic hashes for strings, bytes, and datetime
;; objects.
(setenv "PYTHONHASHSEED" "0")
(apply invoke "make" "lib389" make-flags)))
(add-after 'install 'install-python-tools
(lambda* (#:key make-flags #:allow-other-keys)
(apply invoke "make" "lib389-install" make-flags)))
(add-after 'install-python-tools 'wrap-python-tools
(lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(pythonpath (getenv "GUIX_PYTHONPATH")))
(for-each (lambda (file)
(wrap-program (string-append out file)
`("GUIX_PYTHONPATH" ":" prefix (,pythonpath))))
'("/sbin/dsconf"
"/sbin/dscreate"
"/sbin/dsctl"
"/sbin/dsidm"
"/bin/ds-logpipe.py"
"/bin/ds-replcheck"))))))))
;; Install directory must be on PYTHONPATH.
(add-installed-pythonpath inputs outputs)
;; Install directory must exist.
(mkdir-p pythondir)
(setenv "INSTALL_PREFIX" #$output)
(substitute* "Makefile.am"
(("setup.py install --skip-build" m)
(string-append
m " --prefix=" #$output
" --root=/ --single-version-externally-managed"))))))
(add-after 'build 'build-python-tools
(lambda* (#:key make-flags #:allow-other-keys)
;; Set DETERMINISTIC_BUILD to override the embedded mtime in pyc
;; files.
(setenv "DETERMINISTIC_BUILD" "1")
;; Use deterministic hashes for strings, bytes, and datetime
;; objects.
(setenv "PYTHONHASHSEED" "0")
(apply invoke "make" "lib389" make-flags)))
(add-after 'install 'install-python-tools
(lambda* (#:key make-flags #:allow-other-keys)
(apply invoke "make" "lib389-install" make-flags)))
(add-after 'install-python-tools 'wrap-python-tools
(lambda* (#:key outputs #:allow-other-keys)
(let ((pythonpath (getenv "GUIX_PYTHONPATH")))
(for-each (lambda (file)
(wrap-program (string-append #$output file)
`("GUIX_PYTHONPATH" ":" prefix (,pythonpath))))
'("/sbin/dsconf"
"/sbin/dscreate"
"/sbin/dsctl"
"/sbin/dsidm"
"/bin/ds-logpipe.py"
"/bin/ds-replcheck"))))))))
(inputs
`(("bdb" ,bdb)
("cracklib" ,cracklib)
("cyrus-sasl" ,cyrus-sasl)
("gnutls" ,gnutls)
("httpd" ,httpd)
("icu4c" ,icu4c)
("iproute" ,iproute)
("libevent" ,libevent)
("libselinux" ,libselinux)
("linux-pam" ,linux-pam)
("mit-krb5" ,mit-krb5)
("net-snmp" ,net-snmp)
("nspr" ,nspr)
("nss" ,nss)
("nss:bin" ,nss "bin") ; for certutil
("openldap" ,openldap)
("openssl" ,openssl) ; #included by net-snmp
("pcre" ,pcre)
("perl" ,perl)
("python" ,python)
("python-pyasn1" ,python-pyasn1)
("python-pyasn1-modules" ,python-pyasn1-modules)
("python-pytest" ,python-pytest)
("python-dateutil" ,python-dateutil)
("python-six" ,python-six)
("python-argcomplete" ,python-argcomplete)
("python-argparse-manpage" ,python-argparse-manpage)
("python-ldap" ,python-ldap)))
(list bdb
cracklib
cyrus-sasl
gnutls
httpd
icu4c
iproute
json-c
libevent
libselinux
linux-pam
lmdb
mit-krb5
net-snmp
nspr
nss
(list nss "bin") ;for certutil
openldap
openssl ;#included by net-snmp
pcre
python
python-pyasn1
python-pyasn1-modules
python-pytest
python-dateutil
python-six
python-argcomplete
python-argparse-manpage
python-ldap))
(native-inputs
`(("autoconf" ,autoconf)
("automake" ,automake)
("doxygen" ,doxygen)
("gettext" ,gettext-minimal)
("libtool" ,libtool)
("rsync" ,rsync)
("pkg-config" ,pkg-config)))
(list autoconf
automake
cmocka
doxygen
gettext-minimal
libtool
rsync
pkg-config))
(home-page "https://directory.fedoraproject.org")
(synopsis "Enterprise-class LDAP server")
(description "389ds is an enterprise-class LDAP server. It is hardened by

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