gnu: Add r-xcms.
* gnu/packages/bioconductor.scm (r-xcms): New variable.
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		|  | @ -4004,3 +4004,39 @@ genes.") | |||
| data mainly through the use of wavelet transforms.  It supports peak detection | ||||
| based on @dfn{Continuous Wavelet Transform} (CWT).") | ||||
|     (license license:lgpl2.0+))) | ||||
| 
 | ||||
| (define-public r-xcms | ||||
|   (package | ||||
|     (name "r-xcms") | ||||
|     (version "3.4.4") | ||||
|     (source | ||||
|      (origin | ||||
|        (method url-fetch) | ||||
|        (uri (bioconductor-uri "xcms" version)) | ||||
|        (sha256 | ||||
|         (base32 | ||||
|          "073f25m7y8z4560k93d99fv72pr7nrgrp054zssi7jhas4l3ddww")))) | ||||
|     (build-system r-build-system) | ||||
|     (propagated-inputs | ||||
|      `(("r-biobase" ,r-biobase) | ||||
|        ("r-biocgenerics" ,r-biocgenerics) | ||||
|        ("r-biocparallel" ,r-biocparallel) | ||||
|        ("r-lattice" ,r-lattice) | ||||
|        ("r-massspecwavelet" ,r-massspecwavelet) | ||||
|        ("r-msnbase" ,r-msnbase) | ||||
|        ("r-multtest" ,r-multtest) | ||||
|        ("r-mzr" ,r-mzr) | ||||
|        ("r-plyr" ,r-plyr) | ||||
|        ("r-protgenerics" ,r-protgenerics) | ||||
|        ("r-rann" ,r-rann) | ||||
|        ("r-rcolorbrewer" ,r-rcolorbrewer) | ||||
|        ("r-robustbase" ,r-robustbase) | ||||
|        ("r-s4vectors" ,r-s4vectors))) | ||||
|     (home-page "https://bioconductor.org/packages/xcms/") | ||||
|     (synopsis "LC/MS and GC/MS mass spectrometry data analysis") | ||||
|     (description | ||||
|      "This package provides a framework for processing and visualization of | ||||
| chromatographically separated and single-spectra mass spectral data.  It | ||||
| imports from AIA/ANDI NetCDF, mzXML, mzData and mzML files.  It preprocesses | ||||
| data for high-throughput, untargeted analyte profiling.") | ||||
|     (license license:gpl2+))) | ||||
|  |  | |||
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