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guix: Upgrade to Bioconductor 3.16. 

* guix/build-system/r.scm (bioconductor-uri): Bump Bioconductor version to
3.17.
* guix/import/cran.scm (%bioconductor-version): Same.
master
Ricardo Wurmus 2023-04-27 21:48:12 +02:00
parent cb8d080349
commit ec52655ce6
No known key found for this signature in database
GPG Key ID: 197A5888235FACAC
2 changed files with 5 additions and 5 deletions
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4
guix/build-system/r.scm
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@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU ;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2015, 2017, 2018, 2019, 2020 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2015-2023 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2021 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2021 Ludovic Courtès <ludo@gnu.org>
;;; ;;;
;;; This file is part of GNU Guix. ;;; This file is part of GNU Guix.
@ -60,7 +60,7 @@ release corresponding to NAME and VERSION."
"/src/contrib/" "/src/contrib/"
name "_" version ".tar.gz") name "_" version ".tar.gz")
;; TODO: use %bioconductor-version from (guix import cran) ;; TODO: use %bioconductor-version from (guix import cran)
(string-append "https://bioconductor.org/packages/3.16" (string-append "https://bioconductor.org/packages/3.17"
type-url-part type-url-part
"/src/contrib/" "/src/contrib/"
name "_" version ".tar.gz")))) name "_" version ".tar.gz"))))

6
guix/import/cran.scm
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@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU ;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022, 2023 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2015-2023 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2015, 2016, 2017, 2019, 2020, 2021 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2015, 2016, 2017, 2019, 2020, 2021 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2017 Mathieu Othacehe <m.othacehe@gmail.com> ;;; Copyright © 2017 Mathieu Othacehe <m.othacehe@gmail.com>
;;; Copyright © 2020 Martin Becze <mjbecze@riseup.net> ;;; Copyright © 2020 Martin Becze <mjbecze@riseup.net>
@ -187,9 +187,9 @@ package definition."
(define %cran-canonical-url "https://cran.r-project.org/package=") (define %cran-canonical-url "https://cran.r-project.org/package=")
(define %bioconductor-url "https://bioconductor.org/packages/") (define %bioconductor-url "https://bioconductor.org/packages/")
;; The latest Bioconductor release is 3.16. Bioconductor packages should be ;; The latest Bioconductor release is 3.17. Bioconductor packages should be
;; updated together. ;; updated together.
(define %bioconductor-version "3.16") (define %bioconductor-version "3.17")
(define* (bioconductor-packages-list-url #:optional type) (define* (bioconductor-packages-list-url #:optional type)
(string-append "https://bioconductor.org/packages/" (string-append "https://bioconductor.org/packages/"