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gnu: Add r-scone.

* gnu/packages/bioconductor.scm (r-scone): New variable.
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Ricardo Wurmus 2019-03-13 13:14:40 +01:00
parent b409c3570f
commit f088775799
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@ -2083,3 +2083,43 @@ of differences between two conditions. The package also includes functions
for simulating data with these patterns from negative binomial for simulating data with these patterns from negative binomial
distributions.") distributions.")
(license license:gpl2))) (license license:gpl2)))
(define-public r-scone
(package
(name "r-scone")
(version "1.6.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "scone" version))
(sha256
(base32
"0l1x4cjnfjbpx6k55sjqx03555daa6v63rq0rg6b7jpz8xxzwa7p"))))
(build-system r-build-system)
(propagated-inputs
`(("r-aroma-light" ,r-aroma-light)
("r-biocparallel" ,r-biocparallel)
("r-boot" ,r-boot)
("r-class" ,r-class)
("r-cluster" ,r-cluster)
("r-compositions" ,r-compositions)
("r-diptest" ,r-diptest)
("r-edger" ,r-edger)
("r-fpc" ,r-fpc)
("r-gplots" ,r-gplots)
("r-hexbin" ,r-hexbin)
("r-limma" ,r-limma)
("r-matrixstats" ,r-matrixstats)
("r-mixtools" ,r-mixtools)
("r-rarpack" ,r-rarpack)
("r-rcolorbrewer" ,r-rcolorbrewer)
("r-rhdf5" ,r-rhdf5)
("r-ruvseq" ,r-ruvseq)
("r-summarizedexperiment" ,r-summarizedexperiment)))
(home-page "https://bioconductor.org/packages/scone")
(synopsis "Single cell overview of normalized expression data")
(description
"SCONE is an R package for comparing and ranking the performance of
different normalization schemes for single-cell RNA-seq and other
high-throughput analyses.")
(license license:artistic2.0)))