me
/
guix
Archived
1
0
Fork 0
Code

gnu: r-txdb-hsapiens-ucsc-hg19-knowngene: Use bioconductor-uri. 

* gnu/packages/bioconductor.scm (r-txdb-hsapiens-ucsc-hg19-knowngene)[source]:
Use bioconductor-uri.
[arguments]: Enable substitution.
master
Ricardo Wurmus 2019-12-04 09:33:09 +01:00
parent 717d7cda9d
commit f2580a1385
No known key found for this signature in database
GPG Key ID: 197A5888235FACAC
1 changed files with 2 additions and 9 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

11
gnu/packages/bioconductor.scm
View File

@ -497,21 +497,14 @@ genomes and gene ID formats, largely based on the UCSC table browser.")
(version "3.2.2")
(source (origin
(method url-fetch)
;; We cannot use bioconductor-uri here because this tarball is
;; located under "data/annotation/" instead of "bioc/".
(uri (string-append "https://bioconductor.org/packages/"
"release/data/annotation/src/contrib"
"/TxDb.Hsapiens.UCSC.hg19.knownGene_"
version ".tar.gz"))
(uri (bioconductor-uri "TxDb.Hsapiens.UCSC.hg19.knownGene"
version 'annotation))
(sha256
(base32
"1sajhcqqwazgz2lqbik7rd935i7kpnh08zxbp2ra10j72yqy4g86"))))
(properties
`((upstream-name . "TxDb.Hsapiens.UCSC.hg19.knownGene")))
(build-system r-build-system)
;; As this package provides little more than a very large data file it
;; doesn't make sense to build substitutes.
(arguments `(#:substitutable? #f))
(propagated-inputs
`(("r-genomicfeatures" ,r-genomicfeatures)))
(home-page