gnu: Add r-kbet.
* gnu/packages/bioinformatics.scm (r-kbet): New variable.
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@ -16196,6 +16196,32 @@ control samples and applying quantile normalization on all markers of
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interest.")
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interest.")
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(license license:gpl2+))))
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(license license:gpl2+))))
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(define-public r-kbet
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(let ((commit "f35171dfb04c7951b8a09ac778faf7424c4b6bc0")
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(revision "1"))
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(package
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(name "r-kbet")
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(version (git-version "0.99.6" revision commit))
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(source (origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/theislab/kBET")
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(commit commit)))
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(file-name (git-file-name name version))
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(sha256
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(base32
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"1r91prl2kki3zk694vhlmxdlqh0ixlhs8jfcqw6wc7cdsa0nv67k"))))
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(properties `((upstream-name . "kBET")))
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(build-system r-build-system)
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(propagated-inputs (list r-cluster r-fnn r-ggplot2 r-mass r-rcolorbrewer))
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(native-inputs (list r-knitr))
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(home-page "https://github.com/theislab/kBET")
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(synopsis "k-nearest neighbour batch effect test")
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(description
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"This tool detects batch effects in high-dimensional data based on chi^2-test.")
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;; Any version of the GPL
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(license license:gpl3+))))
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(define-public ccwl
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(define-public ccwl
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(package
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(package
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(name "ccwl")
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(name "ccwl")
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