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Marius Bakke 2019-04-17 00:08:34 +02:00
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9
Makefile.am
View File

@ -120,6 +120,7 @@ MODULES = \
guix/build-system/gnu.scm \
guix/build-system/guile.scm \
guix/build-system/haskell.scm \
guix/build-system/linux-module.scm \
guix/build-system/perl.scm \
guix/build-system/python.scm \
guix/build-system/ocaml.scm \
@ -138,6 +139,7 @@ MODULES = \
guix/store.scm \
guix/cvs-download.scm \
guix/svn-download.scm \
guix/colors.scm \
guix/i18n.scm \
guix/ui.scm \
guix/status.scm \
@ -172,6 +174,7 @@ MODULES = \
guix/build/texlive-build-system.scm \
guix/build/waf-build-system.scm \
guix/build/haskell-build-system.scm \
guix/build/linux-module-build-system.scm \
guix/build/store-copy.scm \
guix/build/utils.scm \
guix/build/union.scm \
@ -276,7 +279,8 @@ endif BUILD_DAEMON_OFFLOAD
# Scheme implementation of the build daemon and related functionality.
STORE_MODULES = \
guix/store/database.scm \
guix/store/deduplication.scm
guix/store/deduplication.scm \
guix/store/roots.scm
MODULES += $(STORE_MODULES)
@ -407,7 +411,8 @@ SCM_TESTS = \
tests/pypi.scm \
tests/import-utils.scm \
tests/store-database.scm \
tests/store-deduplication.scm
tests/store-deduplication.scm \
tests/store-roots.scm
SH_TESTS = \
tests/guix-build.sh \

168
doc/guix.texi
View File

@ -1795,25 +1795,14 @@ available.
@node Limitations
@section Limitations
As of version @value{VERSION}, Guix System is
not production-ready. It may contain bugs and lack important
features. Thus, if you are looking for a stable production system that
respects your freedom as a computer user, a good solution at this point
is to consider @url{http://www.gnu.org/distros/free-distros.html, one of
the more established GNU/Linux distributions}. We hope you can soon switch
to the Guix System without fear, of course. In the meantime, you can
also keep using your distribution and try out the package manager on top
of it (@pxref{Installation}).
We consider Guix System to be ready for a wide range of ``desktop'' and server
use cases. The reliability guarantees it provides---transactional upgrades
and rollbacks, reproducibility---make it a solid foundation.
Before you proceed with the installation, be aware of the following
noteworthy limitations applicable to version @value{VERSION}:
Nevertheless, before you proceed with the installation, be aware of the
following noteworthy limitations applicable to version @value{VERSION}:
@itemize
@item
The installation process does not include a graphical user interface and
requires familiarity with GNU/Linux (see the following subsections to
get a feel of what that means.)
@item
Support for the Logical Volume Manager (LVM) is missing.
@ -1821,19 +1810,15 @@ Support for the Logical Volume Manager (LVM) is missing.
More and more system services are provided (@pxref{Services}), but some
may be missing.
@item
More than 8,500 packages are available, but you might
occasionally find that a useful package is missing.
@item
GNOME, Xfce, LXDE, and Enlightenment are available (@pxref{Desktop Services}),
as well as a number of X11 window managers. However, some graphical
applications may be missing, as well as KDE.
as well as a number of X11 window managers. However, KDE is currently
missing.
@end itemize
You have been warned! But more than a disclaimer, this is an invitation
to report issues (and success stories!), and to join us in improving it.
@xref{Contributing}, for more info.
More than a disclaimer, this is an invitation to report issues (and success
stories!), and to join us in improving it. @xref{Contributing}, for more
info.
@node Hardware Considerations
@ -1856,7 +1841,7 @@ devices. WiFi devices known to work include those using Atheros chips
driver, and those using Broadcom/AirForce chips (BCM43xx with
Wireless-Core Revision 5), which corresponds to the @code{b43-open}
Linux-libre driver. Free firmware exists for both and is available
out-of-the-box on Guix System, as part of @var{%base-firmware}
out-of-the-box on Guix System, as part of @code{%base-firmware}
(@pxref{operating-system Reference, @code{firmware}}).
@cindex RYF, Respects Your Freedom
@ -3385,7 +3370,7 @@ deleted. The set of garbage collector roots (``GC roots'' for short)
includes default user profiles; by default, the symlinks under
@file{/var/guix/gcroots} represent these GC roots. New GC roots can be
added with @command{guix build --root}, for example (@pxref{Invoking
guix build}).
guix build}). The @command{guix gc --list-roots} command lists them.
Prior to running @code{guix gc --collect-garbage} to make space, it is
often useful to remove old generations from user profiles; that way, old
@ -3438,8 +3423,22 @@ as @code{500MiB}, as described above.
When @var{free} or more is already available in @file{/gnu/store}, do
nothing and exit immediately.
@item --delete-generations[=@var{duration}]
@itemx -d [@var{duration}]
Before starting the garbage collection process, delete all the generations
older than @var{duration}, for all the user profiles; when run as root, this
applies to all the profiles @emph{of all the users}.
For example, this command deletes all the generations of all your profiles
that are older than 2 months (except generations that are current), and then
proceeds to free space until at least 10 GiB are available:
@example
guix gc -d 2m -F 10G
@end example
@item --delete
@itemx -d
@itemx -D
Attempt to delete all the store files and directories specified as
arguments. This fails if some of the files are not in the store, or if
they are still live.
@ -3451,6 +3450,10 @@ This prints nothing unless the daemon was started with
@option{--cache-failures} (@pxref{Invoking guix-daemon,
@option{--cache-failures}}).
@item --list-roots
List the GC roots owned by the user; when run as root, list @emph{all} the GC
roots.
@item --clear-failures
Remove the specified store items from the failed-build cache.
@ -5406,6 +5409,27 @@ automatically corrected.
@end table
@end deftp
@deffn {Scheme Syntax} this-package
When used in the @emph{lexical scope} of a package field definition, this
identifier resolves to the package being defined.
The example below shows how to add a package as a native input of itself when
cross-compiling:
@example
(package
(name "guile")
;; ...
;; When cross-compiled, Guile, for example, depends on
;; a native version of itself. Add it here.
(native-inputs (if (%current-target-system)
`(("self" ,this-package))
'())))
@end example
It is an error to refer to @code{this-package} outside a package definition.
@end deffn
@node origin Reference
@subsection @code{origin} Reference
@ -6192,6 +6216,33 @@ is not enabled by default. It can be enabled with @code{#:glib-or-gtk?}.
@end table
@end defvr
@defvr {Scheme Variable} linux-module-build-system
@var{linux-module-build-system} allows building Linux kernel modules.
@cindex build phases
This build system is an extension of @var{gnu-build-system}, but with the
following phases changed:
@table @code
@item configure
This phase configures the environment so that the Linux kernel's Makefile
can be used to build the external kernel module.
@item build
This phase uses the Linux kernel's Makefile in order to build the external
kernel module.
@item install
This phase uses the Linux kernel's Makefile in order to install the external
kernel module.
@end table
It is possible and useful to specify the Linux kernel to use for building
the module (in the "arguments" form of a package using the
linux-module-build-system, use the key #:linux to specify it).
@end defvr
Lastly, for packages that do not need anything as sophisticated, a
``trivial'' build system is provided. It is trivial in the sense that
it provides basically no support: it does not pull any implicit inputs,
@ -10406,6 +10457,10 @@ the command-line of the kernel---e.g., @code{("console=ttyS0")}.
@item @code{bootloader}
The system bootloader configuration object. @xref{Bootloader Configuration}.
@item @code{label}
This is the label (a string) as it appears in the bootloader's menu entry.
The default label includes the kernel name and version.
@item @code{keyboard-layout} (default: @code{#f})
This field specifies the keyboard layout to use in the console. It can be
either @code{#f}, in which case the default keyboard layout is used (usually
@ -10558,6 +10613,27 @@ is that only @code{root} and members of the @code{wheel} group may use
@code{sudo}.
@end table
@deffn {Scheme Syntax} this-operating-system
When used in the @emph{lexical scope} of an operating system field definition,
this identifier resolves to the operating system being defined.
The example below shows how to refer to the operating system being defined in
the definition of the @code{label} field:
@example
(use-modules (gnu) (guix))
(operating-system
;; ...
(label (package-full-name
(operating-system-kernel this-operating-system))))
@end example
It is an error to refer to @code{this-operating-system} outside an operating
system definition.
@end deffn
@end deftp
@node File Systems
@ -23122,7 +23198,7 @@ The port to bind the server to.
@cindex fingerprint
@subsubheading Fingerprint Service
The @code{(gnu services fingerprint)} module provides a DBus service to
The @code{(gnu services authentication)} module provides a DBus service to
read and identify fingerprints via a fingerprint sensor.
@defvr {Scheme Variable} fprintd-service-type
@ -23983,7 +24059,7 @@ must @emph{not} be an OS device name such as @file{/dev/sda1}.
@end deftp
@c FIXME: Write documentation once it's stable.
Fow now only GRUB has theme support. GRUB themes are created using
For now only GRUB has theme support. GRUB themes are created using
the @code{grub-theme} form, which is not documented yet.
@defvr {Scheme Variable} %default-theme
@ -24669,23 +24745,23 @@ exception is the @dfn{boot service type}, which is the ultimate service.
Optionally, a default value for instances of this type.
@end enumerate
In this example, @var{guix-service-type} extends three services:
In this example, @code{guix-service-type} extends three services:
@table @var
@table @code
@item shepherd-root-service-type
The @var{guix-shepherd-service} procedure defines how the Shepherd
The @code{guix-shepherd-service} procedure defines how the Shepherd
service is extended. Namely, it returns a @code{<shepherd-service>}
object that defines how @command{guix-daemon} is started and stopped
(@pxref{Shepherd Services}).
@item account-service-type
This extension for this service is computed by @var{guix-accounts},
This extension for this service is computed by @code{guix-accounts},
which returns a list of @code{user-group} and @code{user-account}
objects representing the build user accounts (@pxref{Invoking
guix-daemon}).
@item activation-service-type
Here @var{guix-activation} is a procedure that returns a gexp, which is
Here @code{guix-activation} is a procedure that returns a gexp, which is
a code snippet to run at ``activation time''---e.g., when the service is
booted.
@end table
@ -24710,7 +24786,7 @@ value is omitted, the default value specified by
(service guix-service-type)
@end example
@var{guix-service-type} is quite simple because it extends other
@code{guix-service-type} is quite simple because it extends other
services but is not extensible itself.
@c @subsubsubsection Extensible Service Types
@ -24736,7 +24812,7 @@ The service type for an @emph{extensible} service looks like this:
This is the service type for the
@uref{https://wiki.gentoo.org/wiki/Project:Eudev, eudev device
management daemon}. Compared to the previous example, in addition to an
extension of @var{shepherd-root-service-type}, we see two new fields:
extension of @code{shepherd-root-service-type}, we see two new fields:
@table @code
@item compose
@ -24763,7 +24839,7 @@ them (@pxref{Invoking guix system}).
@end table
There can be only one instance of an extensible service type such as
@var{udev-service-type}. If there were more, the
@code{udev-service-type}. If there were more, the
@code{service-extension} specifications would be ambiguous.
Still here? The next section provides a reference of the programming
@ -24837,7 +24913,7 @@ Here is an example of how a service is created and manipulated:
The @code{modify-services} form provides a handy way to change the
parameters of some of the services of a list such as
@var{%base-services} (@pxref{Base Services, @code{%base-services}}). It
@code{%base-services} (@pxref{Base Services, @code{%base-services}}). It
evaluates to a list of services. Of course, you could always use
standard list combinators such as @code{map} and @code{fold} to do that
(@pxref{SRFI-1, List Library,, guile, GNU Guile Reference Manual});
@ -25018,8 +25094,8 @@ You can actually generate such a graph for any operating system
definition using the @command{guix system shepherd-graph} command
(@pxref{system-shepherd-graph, @command{guix system shepherd-graph}}).
The @var{%shepherd-root-service} is a service object representing
PID@tie{}1, of type @var{shepherd-root-service-type}; it can be extended
The @code{%shepherd-root-service} is a service object representing
PID@tie{}1, of type @code{shepherd-root-service-type}; it can be extended
by passing it lists of @code{<shepherd-service>} objects.
@deftp {Data Type} shepherd-service
@ -25067,10 +25143,10 @@ A documentation string, as shown when running:
herd doc @var{service-name}
@end example
where @var{service-name} is one of the symbols in @var{provision}
where @var{service-name} is one of the symbols in @code{provision}
(@pxref{Invoking herd,,, shepherd, The GNU Shepherd Manual}).
@item @code{modules} (default: @var{%default-modules})
@item @code{modules} (default: @code{%default-modules})
This is the list of modules that must be in scope when @code{start} and
@code{stop} are evaluated.
@ -25317,7 +25393,7 @@ order of magnitudes lower than a full rebuild of the dependency chain.
@cindex replacements of packages, for grafts
For instance, suppose a security update needs to be applied to Bash.
Guix developers will provide a package definition for the ``fixed''
Bash, say @var{bash-fixed}, in the usual way (@pxref{Defining
Bash, say @code{bash-fixed}, in the usual way (@pxref{Defining
Packages}). Then, the original package definition is augmented with a
@code{replacement} field pointing to the package containing the bug fix:
@ -25332,14 +25408,14 @@ Packages}). Then, the original package definition is augmented with a
From there on, any package depending directly or indirectly on Bash---as
reported by @command{guix gc --requisites} (@pxref{Invoking guix
gc})---that is installed is automatically ``rewritten'' to refer to
@var{bash-fixed} instead of @var{bash}. This grafting process takes
@code{bash-fixed} instead of @code{bash}. This grafting process takes
time proportional to the size of the package, usually less than a
minute for an ``average'' package on a recent machine. Grafting is
recursive: when an indirect dependency requires grafting, then grafting
``propagates'' up to the package that the user is installing.
Currently, the length of the name and version of the graft and that of
the package it replaces (@var{bash-fixed} and @var{bash} in the example
the package it replaces (@code{bash-fixed} and @code{bash} in the example
above) must be equal. This restriction mostly comes from the fact that
grafting works by patching files, including binary files, directly.
Other restrictions may apply: for instance, when adding a graft to a

5
gnu/build/vm.scm
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@ -471,11 +471,6 @@ GRUB configuration and OS-DRV as the stuff in it."
"mnt=/tmp/root/mnt"
"-path-list" "-"
"--"
;; XXX: Add padding to avoid I/O errors on i686:
;; <https://bugs.gnu.org/33639>.
"-padding" "10m"
"-volid" (string-upcase volume-id)
(if volume-uuid
`("-volume_date" "uuid"

15
gnu/installer.scm
View File

@ -91,9 +91,17 @@ version of this file."
(define apply-locale
;; Install the specified locale.
#~(lambda (locale-name)
(false-if-exception
(setlocale LC_ALL locale-name))))
(with-imported-modules (source-module-closure '((gnu services herd)))
#~(lambda (locale)
(false-if-exception
(setlocale LC_ALL locale))
;; Restart the documentation viewer so it displays the manual in
;; language that corresponds to LOCALE.
(with-error-to-port (%make-void-port "w")
(lambda ()
(stop-service 'term-tty2)
(start-service 'term-tty2 (list locale)))))))
(define* (compute-locale-step #:key
locales-name
@ -323,6 +331,7 @@ selected keymap."
(gnu installer newt)
((gnu installer newt keymap)
#:select (keyboard-layout->configuration))
(gnu services herd)
(guix i18n)
(guix build utils)
(ice-9 match))

41
gnu/installer/newt/services.scm
View File

@ -45,19 +45,14 @@ choose the one to use on the log-in screen.")
(condition
(&installer-step-abort))))))
(define (run-networking-cbt-page network-management?)
"Run a page allowing the user to select networking services. When
NETWORK-MANAGEMENT? is true, include network management services like
NetworkManager."
(define (run-networking-cbt-page)
"Run a page allowing the user to select networking services."
(run-checkbox-tree-page
#:info-text (G_ "You can now select networking services to run on your \
system.")
#:title (G_ "Network service")
#:items (filter (let ((types (if network-management?
'(network-management networking)
'(networking))))
(lambda (service)
(memq (system-service-type service) types)))
#:items (filter (lambda (service)
(eq? 'networking (system-service-type service)))
%system-services)
#:item->text (compose G_ system-service-name)
#:checkbox-tree-height 5
@ -67,9 +62,35 @@ system.")
(condition
(&installer-step-abort))))))
(define (run-network-management-page)
"Run a page to select among several network management methods."
(let ((title (G_ "Network management")))
(run-listbox-selection-page
#:title title
#:info-text (G_ "Choose the method to manage network connections.
We recommend NetworkManager or Connman for a WiFi-capable laptop; the DHCP \
client may be enough for a server.")
#:info-textbox-width 70
#:listbox-items (filter (lambda (service)
(eq? 'network-management
(system-service-type service)))
%system-services)
#:listbox-item->text (compose G_ system-service-name)
#:sort-listbox-items? #f
#:button-text (G_ "Exit")
#:button-callback-procedure
(lambda _
(raise
(condition
(&installer-step-abort)))))))
(define (run-services-page)
(let ((desktop (run-desktop-environments-cbt-page)))
;; When the user did not select any desktop services, and thus didn't get
;; '%desktop-services', offer network management services.
(append desktop
(run-networking-cbt-page (null? desktop)))))
(run-networking-cbt-page)
(if (null? desktop)
(list (run-network-management-page))
'()))))

17
gnu/installer/services.scm
View File

@ -20,6 +20,7 @@
(define-module (gnu installer services)
#:use-module (guix records)
#:use-module (srfi srfi-1)
#:use-module (ice-9 match)
#:export (system-service?
system-service-name
system-service-type
@ -75,15 +76,17 @@
(system-service
(name (G_ "NetworkManager network connection manager"))
(type 'network-management)
(snippet '(service network-manager-service-type)))
(snippet '((service network-manager-service-type)
(service wpa-supplicant-service-type))))
(system-service
(name (G_ "Connman network connection manager"))
(type 'network-management)
(snippet '(service connman-service-type)))
(snippet '((service connman-service-type)
(service wpa-supplicant-service-type))))
(system-service
(name (G_ "DHCP client (dynamic IP address assignment)"))
(type 'network-management)
(snippet '(service dhcp-client-service))))))
(snippet '(service dhcp-client-service-type))))))
(define (desktop-system-service? service)
"Return true if SERVICE is a desktop environment service."
@ -95,7 +98,13 @@
(define (system-services->configuration services)
"Return the configuration field for SERVICES."
(let* ((snippets (map system-service-snippet services))
(let* ((snippets (append-map (lambda (service)
(match (system-service-snippet service)
((and lst (('service _ ...) ...))
lst)
(sexp
(list sexp))))
services))
(desktop? (find desktop-system-service? services))
(base (if desktop?
'%desktop-services

15
gnu/local.mk
View File

@ -374,6 +374,7 @@ GNU_SYSTEM_MODULES = \
%D%/packages/php.scm \
%D%/packages/pkg-config.scm \
%D%/packages/plotutils.scm \
%D%/packages/poedit.scm \
%D%/packages/polkit.scm \
%D%/packages/popt.scm \
%D%/packages/printers.scm \
@ -622,7 +623,7 @@ INSTALLER_MODULES = \
# ENABLE_INSTALLER is true.
if ENABLE_INSTALLER
GNU_SYSTEM_MODULES += $(INSTALLER_MODULES)
elif !ENABLE_INSTALLER
else !ENABLE_INSTALLER
MODULES_NOT_COMPILED += $(INSTALLER_MODULES)
endif
@ -916,6 +917,7 @@ dist_patch_DATA = \
%D%/packages/patches/icedtea-6-hotspot-gcc-segfault-workaround.patch \
%D%/packages/patches/icedtea-7-hotspot-gcc-segfault-workaround.patch \
%D%/packages/patches/id3lib-CVE-2007-4460.patch \
%D%/packages/patches/idris-test-no-node.patch \
%D%/packages/patches/ilmbase-fix-tests.patch \
%D%/packages/patches/inkscape-poppler-compat3.patch \
%D%/packages/patches/intltool-perl-compatibility.patch \
@ -945,7 +947,6 @@ dist_patch_DATA = \
%D%/packages/patches/kio-search-smbd-on-PATH.patch \
%D%/packages/patches/kmod-module-directory.patch \
%D%/packages/patches/kmscon-runtime-keymap-switch.patch \
%D%/packages/patches/knot-include-system-lmdb-header.patch \
%D%/packages/patches/kpackage-allow-external-paths.patch \
%D%/packages/patches/kobodeluxe-paths.patch \
%D%/packages/patches/kobodeluxe-enemies-pipe-decl.patch \
@ -953,6 +954,7 @@ dist_patch_DATA = \
%D%/packages/patches/kobodeluxe-manpage-minus-not-hyphen.patch \
%D%/packages/patches/kobodeluxe-midicon-segmentation-fault.patch \
%D%/packages/patches/kobodeluxe-graphics-window-signed-char.patch \
%D%/packages/patches/kodi-set-libcurl-ssl-parameters.patch \
%D%/packages/patches/kodi-skip-test-449.patch \
%D%/packages/patches/laby-make-install.patch \
%D%/packages/patches/lcms-CVE-2018-16435.patch \
@ -1102,6 +1104,10 @@ dist_patch_DATA = \
%D%/packages/patches/ocaml-CVE-2015-8869.patch \
%D%/packages/patches/ocaml-Add-a-.file-directive.patch \
%D%/packages/patches/ocaml-enable-ocamldoc-reproducibility.patch \
%D%/packages/patches/ocaml-dose3-Add-unix-as-dependency-to-dose3.common-in-META.in.patch \
%D%/packages/patches/ocaml-dose3-Fix-for-ocaml-4.06.patch \
%D%/packages/patches/ocaml-dose3-dont-make-printconf.patch \
%D%/packages/patches/ocaml-dose3-Install-mli-cmx-etc.patch \
%D%/packages/patches/omake-fix-non-determinism.patch \
%D%/packages/patches/ola-readdir-r.patch \
%D%/packages/patches/openbabel-fix-crash-on-nwchem-output.patch \
@ -1213,9 +1219,6 @@ dist_patch_DATA = \
%D%/packages/patches/qtscript-disable-tests.patch \
%D%/packages/patches/quagga-reproducible-build.patch \
%D%/packages/patches/quickswitch-fix-dmenu-check.patch \
%D%/packages/patches/quilt-test-fix-regex.patch \
%D%/packages/patches/quilt-getopt-nondigit-param.patch \
%D%/packages/patches/quilt-getopt-second-separator.patch \
%D%/packages/patches/qtwebkit-pbutils-include.patch \
%D%/packages/patches/randomjungle-disable-static-build.patch \
%D%/packages/patches/rapicorn-isnan.patch \
@ -1273,7 +1276,6 @@ dist_patch_DATA = \
%D%/packages/patches/swig-guile-gc.patch \
%D%/packages/patches/swish-e-search.patch \
%D%/packages/patches/swish-e-format-security.patch \
%D%/packages/patches/synfigstudio-fix-ui-with-gtk3.patch \
%D%/packages/patches/stumpwm-fix-broken-read-one-line.patch \
%D%/packages/patches/t1lib-CVE-2010-2642.patch \
%D%/packages/patches/t1lib-CVE-2011-0764.patch \
@ -1338,6 +1340,7 @@ dist_patch_DATA = \
%D%/packages/patches/wavpack-CVE-2018-6767.patch \
%D%/packages/patches/wavpack-CVE-2018-7253.patch \
%D%/packages/patches/wavpack-CVE-2018-7254.patch \
%D%/packages/patches/webkitgtk-sse2.patch \
%D%/packages/patches/weechat-python.patch \
%D%/packages/patches/wicd-bitrate-none-fix.patch \
%D%/packages/patches/wicd-get-selected-profile-fix.patch \

29
gnu/packages/admin.scm
View File

@ -1287,7 +1287,7 @@ module slots, and the list of I/O ports (e.g. serial, parallel, USB).")
(define-public acpica
(package
(name "acpica")
(version "20190215")
(version "20190405")
(source (origin
(method url-fetch)
(uri (string-append
@ -1295,7 +1295,7 @@ module slots, and the list of I/O ports (e.g. serial, parallel, USB).")
version ".tar.gz"))
(sha256
(base32
"1iy2zwi8aicq0b5a0phfacvk1f9z1d89cx43adcf0qh82gb9m4wg"))))
"0hv6r65l8vk3f6i3by7i47vc1917qm47838bpq80lfn22784y53y"))))
(build-system gnu-build-system)
(native-inputs `(("flex" ,flex)
("bison" ,bison)))
@ -1599,13 +1599,13 @@ of supported upstream metrics systems simultaneously.")
(define-public ansible
(package
(name "ansible")
(version "2.7.9")
(version "2.7.10")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ansible" version))
(sha256
(base32 "19vyf60zfmnv7frwm96bzqzvia69dysy9apk8bl84vr03ib9vrbf"))))
(base32 "15721d0bxymghxnlnknq43lszlxg3ybbcp2p5v424hhw6wg2v944"))))
(build-system python-build-system)
(native-inputs
`(("python-bcrypt" ,python-bcrypt)
@ -1736,18 +1736,18 @@ limits.")
(define-public autojump
(package
(name "autojump")
(version "22.5.1")
(version "22.5.3")
(source
(origin
(method url-fetch)
(uri (string-append "https://github.com/wting/autojump/archive/"
"release-v" version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/wting/autojump.git")
(commit (string-append "release-v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"17z9j9936x0nizwrzf664bngh60x5qbvrrf1s5qdzd0f2gdanpvn"))))
(base32 "1rgpsh70manr2dydna9da4x7p8ahii7dgdgwir5fka340n1wrcws"))))
(build-system gnu-build-system)
(native-inputs ;for tests
(native-inputs ; for tests
`(("python-mock" ,python-mock)
("python-pytest" ,python-pytest)))
(inputs
@ -1755,6 +1755,11 @@ limits.")
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'make-git-checkout-writable
;; ‘install.py’ modifies files before installing them.
(lambda _
(for-each make-file-writable (find-files "."))
#t))
(delete 'configure)
(delete 'build)
(replace 'check

6
gnu/packages/algebra.scm
View File

@ -5,7 +5,7 @@
;;; Copyright © 2014, 2018 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2016, 2018, 2019 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2017 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2017, 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2017 Marius Bakke <mbakke@fastmail.com>
;;; Copyright © 2017, 2019 Eric Bavier <bavier@member.fsf.org>
;;;
@ -499,7 +499,7 @@ matrices, and polynomials over the integers and over finite fields.")
(define-public singular
(package
(name "singular")
(version "4.1.1p3")
(version "4.1.2p1")
(source
(origin
(method url-fetch)
@ -513,7 +513,7 @@ matrices, and polynomials over the integers and over finite fields.")
#\.) "-")
"/singular-" version ".tar.gz"))
(sha256 (base32
"1qqj9bm9pkzm0iyycpvm8x6s79wws3nq60lz25h8x1q61h3426sm"))))
"0kvd55353fiqyq1msmi0kka66n5h0aqs7m3km60r01b1w2f8085m"))))
(build-system gnu-build-system)
(native-inputs
`(("doxygen" ,doxygen)

25
gnu/packages/animation.scm
View File

@ -41,18 +41,20 @@
#:use-module (gnu packages qt)
#:use-module (gnu packages video))
;; ETL, synfig, and Synfig Studio are updated in tandem.
(define synfig-version "1.2.2")
(define-public etl
(package
(name "etl")
(version "0.04.22")
(version synfig-version)
(source (origin
(method url-fetch)
;; Keep this synchronized with the synfig release version.
(uri (string-append "mirror://sourceforge/synfig/releases/"
"1.2.0/source/ETL-" version ".tar.gz"))
version "/source/ETL-" version ".tar.gz"))
(sha256
(base32
"0ii73nsd3xzkhz6w1rnxwphl637j9w82xiy6apa9vin2isdynnmc"))))
"12sd8pz8l5xcxcmapkvih3brihdhdb6xmxisr9a415lydid9rh8d"))))
(build-system gnu-build-system)
(home-page "https://www.synfig.org")
(synopsis "Extended C++ template library")
@ -65,7 +67,7 @@ C++ @dfn{Standard Template Library} (STL).")
(define-public synfig
(package
(name "synfig")
(version "1.2.0")
(version synfig-version)
(source (origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/synfig/releases/"
@ -73,7 +75,7 @@ C++ @dfn{Standard Template Library} (STL).")
".tar.gz"))
(sha256
(base32
"1gqx4gn4c73rqwhsgzx0a460gr9hadmi28csp75rx30qavqsj7k1"))))
"1vy27kl68sbg41sfasa58k3p2nc1xfalvzk3k9gich9h90rpnpsz"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags
@ -131,7 +133,8 @@ C++ @dfn{Standard Template Library} (STL).")
("openexr" ,openexr)
("pango" ,pango)))
(native-inputs
`(("pkg-config" ,pkg-config)))
`(("intltool" ,intltool)
("pkg-config" ,pkg-config)))
(home-page "https://www.synfig.org")
(synopsis "Vector-based 2D animation renderer")
(description
@ -143,7 +146,7 @@ for tweening, preventing the need to hand-draw each frame.")
(define-public synfigstudio
(package
(name "synfigstudio")
(version "1.2.0")
(version synfig-version)
(source (origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/synfig/releases/"
@ -151,16 +154,14 @@ for tweening, preventing the need to hand-draw each frame.")
".tar.gz"))
(sha256
(base32
"0fbckfbw8dzf0m2wv7vlmw492k1dqa3zf510z019d0as3zpnp6qm"))
"1ql92kh9z8w2j9yi3pr7hn7wh2r2j35xynwv9xlwyd7niackgykn"))
(modules '((guix build utils)))
(snippet
'(begin
(substitute* "src/synfigapp/pluginmanager.cpp"
(("xmlpp::Node\\* n =") "const xmlpp::Node* n =")
(("xmlpp::Node::NodeList") "xmlpp::Node::const_NodeList"))
#t))
(patches
(search-patches "synfigstudio-fix-ui-with-gtk3.patch"))))
#t))))
(build-system gnu-build-system)
(arguments
`(#:phases

4
gnu/packages/antivirus.scm
View File

@ -44,14 +44,14 @@
(define-public clamav
(package
(name "clamav")
(version "0.101.1")
(version "0.101.2")
(source (origin
(method url-fetch)
(uri (string-append "https://www.clamav.net/downloads/production/"
"clamav-" version ".tar.gz"))
(sha256
(base32
"01mq3z04fjbq5iq8wfwfim72iv3dn04d3ishc5lkhxpmnalqydps"))
"0d3n4y8i5q594h4cjglmvpk4jd73r9ajpp1bvq5lr9zpdzgyn4ha"))
(modules '((guix build utils)))
(snippet
'(begin

4
gnu/packages/assembly.scm
View File

@ -129,14 +129,14 @@ to the clients.")
(define-public fasm
(package
(name "fasm")
(version "1.73.09")
(version "1.73.10")
(source
(origin
(method url-fetch)
(uri (string-append "https://flatassembler.net/fasm-"
version ".tgz"))
(sha256
(base32 "197bcj9aa5wpkvrlaafc1smxjss0fwdspq5fwhwgyy9cc7z5g0ym"))))
(base32 "1lk8vlr0vg7h8lhiav99paa5a1mi0r2m8agxjmczhhavqhx44c32"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; no tests exist

4
gnu/packages/audio.scm
View File

@ -1307,7 +1307,7 @@ patches that can be used with softsynths such as Timidity and WildMidi.")
(define-public guitarix
(package
(name "guitarix")
(version "0.38.0")
(version "0.38.1")
(source (origin
(method url-fetch)
(uri (string-append
@ -1315,7 +1315,7 @@ patches that can be used with softsynths such as Timidity and WildMidi.")
version ".tar.xz"))
(sha256
(base32
"0nv5vm2q86lzsz42kl78jxm6w20al8r7qcnr5f057ria7f8fq2f7"))))
"0bw7xnrx062nwb1bfj9x660h7069ncmz77szcs8icpqxrvhs7z80"))))
(build-system waf-build-system)
(arguments
`(#:tests? #f ; no "check" target

9
gnu/packages/backup.scm
View File

@ -73,7 +73,7 @@
(define-public duplicity
(package
(name "duplicity")
(version "0.7.18.1")
(version "0.7.18.2")
(source
(origin
(method url-fetch)
@ -82,8 +82,7 @@
"-series/" version "/+download/duplicity-"
version ".tar.gz"))
(sha256
(base32
"17c0203y5qz9w8iyhs26l44qf6a1vp26b5ykz1ypdr2kv6g02df9"))))
(base32 "0j37dgyji36hvb5dbzlmh5rj83jwhni02yq16g6rd3hj8f7qhdn2"))))
(build-system python-build-system)
(native-inputs
`(("util-linux" ,util-linux) ; setsid command, for the tests
@ -996,14 +995,14 @@ precious backup space.
(define-public burp
(package
(name "burp")
(version "2.3.2")
(version "2.3.4")
(source (origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/burp/burp-" version
"/burp-" version ".tar.bz2"))
(sha256
(base32
"1nkkn0nfydn39cl5rxd1wbmzizird6z05j9h2xr7xczdlhhjnaai"))))
"0r82mmfjm57yr4f34za3x3rkgc5z2c7nwbnsjjki16qfc9kjyai3"))))
(build-system gnu-build-system)
(inputs
`(("librsync" ,librsync)

193
gnu/packages/bioinformatics.scm
View File

@ -7916,13 +7916,13 @@ as well as query and modify the browser state, such as the current viewport.")
(define-public r-genomicfeatures
(package
(name "r-genomicfeatures")
(version "1.34.7")
(version "1.34.8")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "GenomicFeatures" version))
(sha256
(base32
"100y8cx9xfglbn36k25y09y0qfwm0qpb4b01qhk367832rqz5dhz"))))
"1sxp86hdsg32l2c85jgic65gy92d8kxsm01264hrx6yikdhicjax"))))
(properties
`((upstream-name . "GenomicFeatures")))
(build-system r-build-system)
@ -14555,3 +14555,192 @@ overlapping paired-ended reads into (longer) consensus sequences.
Additionally, the AdapterRemoval may be used to recover a consensus adapter
sequence for paired-ended data, for which this information is not available.")
(license license:gpl3+)))
(define-public pplacer
(let ((commit "807f6f3"))
(package
(name "pplacer")
;; The commit should be updated with each version change.
(version "1.1.alpha19")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/matsen/pplacer.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "11ppbbbx20p2g9wj3ff64dhnarb12q79v7qh4rk0gj6lkbz4n7cn"))))
(build-system ocaml-build-system)
(arguments
`(#:modules ((guix build ocaml-build-system)
(guix build utils)
(ice-9 ftw))
#:phases
(modify-phases %standard-phases
(delete 'configure)
(add-after 'unpack 'fix-build-with-latest-ocaml
(lambda _
(substitute* "myocamlbuild.ml"
(("dep \\[\"c_pam\"\\]" m)
(string-append "flag [\"ocaml\"; \"compile\"] (A \"-unsafe-string\");\n"
m))
(("let run_and_read" m)
(string-append "
let split s ch =
let x = ref [] in
let rec go s =
let pos = String.index s ch in
x := (String.before s pos)::!x;
go (String.after s (pos + 1))
in
try go s
with Not_found -> !x
let split_nl s = split s '\\n'
let before_space s =
try String.before s (String.index s ' ')
with Not_found -> s
" m))
(("run_and_read \"ocamlfind list \\| cut -d' ' -f1\"" m)
(string-append "List.map before_space (split_nl & " m ")"))
((" blank_sep_strings &") "")
((" Lexing.from_string &") ""))
#t))
(add-after 'unpack 'replace-bundled-cddlib
(lambda* (#:key inputs #:allow-other-keys)
(let* ((cddlib-src (assoc-ref inputs "cddlib-src"))
(local-dir "cddlib_guix"))
(mkdir local-dir)
(with-directory-excursion local-dir
(invoke "tar" "xvf" cddlib-src))
(let ((cddlib-src-folder
(string-append local-dir "/"
(list-ref (scandir local-dir) 2)
"/lib-src")))
(for-each make-file-writable (find-files "cdd_src" ".*"))
(for-each
(lambda (file)
(copy-file file
(string-append "cdd_src/" (basename file))))
(find-files cddlib-src-folder ".*[ch]$")))
#t)))
(add-after 'unpack 'fix-makefile
(lambda _
;; Remove system calls to 'git'.
(substitute* "Makefile"
(("^DESCRIPT:=pplacer-.*")
(string-append
"DESCRIPT:=pplacer-$(shell uname)-v" ,version "\n")))
(substitute* "myocamlbuild.ml"
(("git describe --tags --long .*\\\" with")
(string-append
"echo -n v" ,version "-" ,commit "\" with")))
#t))
(replace 'install
(lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(bin (string-append out "/bin")))
(copy-recursively "bin" bin))
#t)))))
(inputs
`(("zlib" ,zlib "static")
("gsl" ,gsl)
("ocaml-ounit" ,ocaml-ounit)
("ocaml-batteries" ,ocaml-batteries)
("ocaml-camlzip" ,camlzip)
("ocaml-csv" ,ocaml-csv)
("ocaml-sqlite3" ,ocaml-sqlite3)
("ocaml-xmlm" ,ocaml-xmlm)
("ocaml-mcl" ,ocaml-mcl)
("ocaml-gsl" ,ocaml-gsl-1)))
(native-inputs
`(("cddlib-src" ,(package-source cddlib))
("ocamlbuild" ,ocamlbuild)
("pkg-config" ,pkg-config)))
(propagated-inputs
`(("pplacer-scripts" ,pplacer-scripts)))
(synopsis "Phylogenetic placement of biological sequences")
(description
"Pplacer places query sequences on a fixed reference phylogenetic tree
to maximize phylogenetic likelihood or posterior probability according to a
reference alignment. Pplacer is designed to be fast, to give useful
information about uncertainty, and to offer advanced visualization and
downstream analysis.")
(home-page "http://matsen.fhcrc.org/pplacer")
(license license:gpl3))))
;; This package is installed alongside 'pplacer'. It is a separate package so
;; that it can use the python-build-system for the scripts that are
;; distributed alongside the main OCaml binaries.
(define pplacer-scripts
(package
(inherit pplacer)
(name "pplacer-scripts")
(build-system python-build-system)
(arguments
`(#:python ,python-2
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'enter-scripts-dir
(lambda _ (chdir "scripts") #t))
(replace 'check
(lambda _ (invoke "python" "-m" "unittest" "discover" "-v") #t))
(add-after 'install 'wrap-executables
(lambda* (#:key inputs outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(bin (string-append out "/bin")))
(let ((path (string-append
(assoc-ref inputs "hmmer") "/bin:"
(assoc-ref inputs "infernal") "/bin")))
(display path)
(wrap-program (string-append bin "/refpkg_align.py")
`("PATH" ":" prefix (,path))))
(let ((path (string-append
(assoc-ref inputs "hmmer") "/bin")))
(wrap-program (string-append bin "/hrefpkg_query.py")
`("PATH" ":" prefix (,path)))))
#t)))))
(inputs
`(("infernal" ,infernal)
("hmmer" ,hmmer)))
(propagated-inputs
`(("python-biopython" ,python2-biopython)
("taxtastic" ,taxtastic)))
(synopsis "Pplacer Python scripts")))
(define-public python2-checkm-genome
(package
(name "python2-checkm-genome")
(version "1.0.13")
(source
(origin
(method url-fetch)
(uri (pypi-uri "checkm-genome" version))
(sha256
(base32
"0bm8gpxjmzxsxxl8lzwqhgx8g1dlnmp6znz7wv3hgb0gdjbf9dzz"))))
(build-system python-build-system)
(arguments
`(#:python ,python-2
#:tests? #f)) ; some tests are interactive
(propagated-inputs
`(("python-dendropy" ,python2-dendropy)
("python-matplotlib" ,python2-matplotlib)
("python-numpy" ,python2-numpy)
("python-pysam" ,python2-pysam)
("python-scipy" ,python2-scipy)))
(home-page "http://pypi.python.org/pypi/checkm/")
(synopsis "Assess the quality of putative genome bins")
(description
"CheckM provides a set of tools for assessing the quality of genomes
recovered from isolates, single cells, or metagenomes. It provides robust
estimates of genome completeness and contamination by using collocated sets of
genes that are ubiquitous and single-copy within a phylogenetic lineage.
Assessment of genome quality can also be examined using plots depicting key
genomic characteristics (e.g., GC, coding density) which highlight sequences
outside the expected distributions of a typical genome. CheckM also provides
tools for identifying genome bins that are likely candidates for merging based
on marker set compatibility, similarity in genomic characteristics, and
proximity within a reference genome.")
(license license:gpl3+)))

6
gnu/packages/calendar.scm
View File

@ -96,13 +96,13 @@ data units.")
(define-public khal
(package
(name "khal")
(version "0.10.0")
(version "0.10.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "khal" version))
(sha256
(base32
"1p49f3g25x900vk32spjbr2aipj12kcbhayny2vwhdpkjlv6k396"))))
"1r8bkgjwkh7i8ygvsv51h1cnax50sb183vafg66x5snxf3dgjl6l"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
@ -146,7 +146,7 @@ data units.")
(synopsis "Console calendar program")
(description "Khal is a standards based console calendar program,
able to synchronize with CalDAV servers through vdirsyncer.")
(home-page "http://lostpackets.de/khal/")
(home-page "https://lostpackets.de/khal/")
(license license:expat)))
(define-public remind

105
gnu/packages/cdrom.scm
View File

@ -863,3 +863,108 @@ Supported extensions to ISO 9660 are Rock Ridge, Joliet, AAIP, zisofs.")
blanking CD-RW media, creating ISO-9660 file system images, extracting audio
CD data, and more. It's mostly compatible with @code{cdrtools}.")
(license gpl2+)))
(define-public libmirage
(package
(name "libmirage")
(version "3.2.0")
(source (origin
(method url-fetch)
(uri (string-append
"https://downloads.sourceforge.net/cdemu/libmirage-"
version ".tar.bz2"))
(sha256
(base32
"1ydph33sfxplp4872dp8ghp574jk5d4qr8hqz61qnznq1b11cnbr"))))
(build-system cmake-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)
("intltool" ,intltool)))
(inputs
`(("glib" ,glib)))
(arguments
;; No tests.
'(#:tests? #f))
(home-page "https://cdemu.sourceforge.io/")
(synopsis "CD-ROM image access library")
(description "libMirage is a CD-ROM image access library. It supports the
following formats: B6T, C2D, CCD, CDI, CIF, CUE, ISO, MDS, MDX, NRG, TOC. It
is written in C and based on GLib. Its aim is to provide uniform access to
the data stored in various image formats.")
(license gpl2+)))
(define-public cdemu-daemon
(package
(name "cdemu-daemon")
(version "3.2.1")
(source (origin
(method url-fetch)
(uri (string-append
"https://downloads.sourceforge.net/cdemu/cdemu-daemon/cdemu-daemon-"
version ".tar.bz2"))
(sha256
(base32
"171qqcziqgf6dd9n8xs9hc71krhjiyx9qr767s8znidyjj88hbc4"))))
(build-system cmake-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)
("intltool" ,intltool)))
(inputs
`(("libmirage" ,libmirage)
("glib" ,glib)
("ao" ,ao)))
(arguments
;; No tests.
'(#:tests? #f))
(home-page "https://cdemu.sourceforge.io/")
(synopsis "CD/DVD-ROM device emulator")
(description "CDemu is a software suite designed to emulate an optical
drive and disc (including CD-ROMs and DVD-ROMs).")
(license gpl2+)))
(define-public cdemu-client
(package
(name "cdemu-client")
(version "3.2.0")
(source (origin
(method url-fetch)
(uri (string-append
"https://downloads.sourceforge.net/cdemu/cdemu-client-"
version ".tar.bz2"))
(sha256
(base32
"1zwz987pb2pakfk9kz8a6xa9hq1ip48cn4ryl9z85dik8k2sizm9"))))
(build-system cmake-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)
("intltool" ,intltool)))
(inputs
`(("python" ,python)
("python-pygobject" ,python-pygobject)
("cdemu-daemon" ,cdemu-daemon)))
(arguments
;; No tests.
`(#:tests? #f
#:phases
(modify-phases %standard-phases
(add-after 'install 'patch-shebang
(lambda* (#:key outputs #:allow-other-keys)
(patch-shebang (string-append (assoc-ref outputs "out")
"/bin/cdemu"))
#t))
(add-after 'patch-shebang 'wrap-program
(lambda* (#:key outputs #:allow-other-keys)
(let ((prog (string-append (assoc-ref outputs "out")
"/bin/cdemu")))
(wrap-program prog
`("PYTHONPATH" = (,(getenv "PYTHONPATH"))))
#t))))))
(home-page "https://cdemu.sourceforge.io/")
(synopsis "Command-line client for controlling cdemu-daemon")
(description "CDEmu client is a simple command-line client for controlling
CDEmu daemon.
It provides a way to perform the key tasks related to controlling the CDEmu
daemon, such as loading and unloading devices, displaying devices' status and
retrieving/setting devices' debug masks.")
(license gpl2+)))

8
gnu/packages/conky.scm
View File

@ -1,6 +1,6 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2015 Siniša Biđin <sinisa@bidin.eu>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2019 Pierre Neidhardt <mail@ambrevar.xyz>
;;;
;;; This file is part of GNU Guix.
@ -37,16 +37,16 @@
(package
(name "conky")
(home-page "https://github.com/brndnmtthws/conky")
(version "1.11.2")
(version "1.11.3")
(source
(origin
(method git-fetch)
(uri (git-reference
(url home-page)
(commit (string-append "v" version))))
(file-name (string-append name "-" version ".tar.gz"))
(file-name (git-file-name name version))
(sha256
(base32 "0yalcpwx85smh6nnvxxsgqi344nk7jzlkkam7yjghm87df4v7xmx"))))
(base32 "0pdl31xvmy8niagzqx9sd2b6hc6lzwfiaz66m4djf1gz9bksc8qv"))))
(build-system cmake-build-system)
(arguments
`(#:tests? #f ; there are no tests

11
gnu/packages/connman.scm
View File

@ -3,7 +3,7 @@
;;; Copyright © 2017 Mathieu Othacehe <m.othacehe@gmail.com>
;;; Copyright © 2017 Clément Lassieur <clement@lassieur.org>
;;; Copyright © 2017 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2017, 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
;;;
;;; This file is part of GNU Guix.
;;;
@ -44,15 +44,14 @@
(define-public connman
(package
(name "connman")
(version "1.36")
(version "1.37")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://kernel.org/linux/network/connman/"
name "-" version ".tar.xz"))
"connman-" version ".tar.xz"))
(sha256
(base32
"0x00dq5c2frz06md3g5y0jh5kbcj2hrfl5qjcqga8gs4ri0xp2f7"))))
(base32 "05kfjiqhqfmbbwc4snnyvi5hc4zxanac62f6gcwaf5mvn0z9pqkc"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags
@ -63,8 +62,6 @@
"--enable-vpnc"
"--enable-pptp"
"--enable-l2tp"
;; location for daemon state files and internal configuration
;; needs to be writeable
"--localstatedir=/var"
(string-append
"--with-dbusconfdir=" (assoc-ref %outputs "out") "/etc")

74
gnu/packages/cran.scm
View File

@ -242,14 +242,14 @@ single step.")
(define-public r-rvest
(package
(name "r-rvest")
(version "0.3.2")
(version "0.3.3")
(source
(origin
(method url-fetch)
(uri (cran-uri "rvest" version))
(sha256
(base32
"04mv99z8dixywx96kfy4215g6ib23s7qvd77hcf9pxqxzcvqhvhd"))))
"0vsm38w83zf0djcrc5ymb1ysg88hmgq2w937ql7pqgvk5px8f2mi"))))
(build-system r-build-system)
(propagated-inputs
`(("r-httr" ,r-httr)
@ -2515,14 +2515,14 @@ Delaunay triangulation and convex hull computation.")
(define-public r-ddalpha
(package
(name "r-ddalpha")
(version "1.3.8")
(version "1.3.9")
(source
(origin
(method url-fetch)
(uri (cran-uri "ddalpha" version))
(sha256
(base32
"0gi0hl14ghgf65zxsvgzh9z6xx1nyi49cpx192lmwrwqn3dy7ba0"))))
"1vzs0cvl6xw3h9i00rg3hs02xwgxcnh8326y10kxmhs3qq4m7nb2"))))
(build-system r-build-system)
(propagated-inputs
`(("r-bh" ,r-bh)
@ -2674,14 +2674,14 @@ by base R methods related to model fitting.")
(define-public r-broom
(package
(name "r-broom")
(version "0.5.1")
(version "0.5.2")
(source
(origin
(method url-fetch)
(uri (cran-uri "broom" version))
(sha256
(base32
"0bmf38yvwalqf5j5yrr48nsk5k3n75s0gwcw621hp5lgrgvnp7ns"))))
"0qmclih5dm5sqzy4hplcfy677kr12pm9pnpv3r319g14dd27pbqn"))))
(build-system r-build-system)
(propagated-inputs
`(("r-backports" ,r-backports)
@ -3701,14 +3701,14 @@ terminals.")
(define-public r-tinytex
(package
(name "r-tinytex")
(version "0.11")
(version "0.12")
(source
(origin
(method url-fetch)
(uri (cran-uri "tinytex" version))
(sha256
(base32
"017g0niwmx8qafsn9b01gp60j5fgwxch0dnkmjgpxxr1k4h1r64x"))))
"03ggxbd4y1ipcmjw5ixa6g6wg4ydargnln7g08bdrdi96zyyq1fh"))))
(build-system r-build-system)
(propagated-inputs
`(("r-xfun" ,r-xfun)))
@ -5181,14 +5181,14 @@ obtain a better initial configuration in non-metric MDS.")
(define-public r-reticulate
(package
(name "r-reticulate")
(version "1.11.1")
(version "1.12")
(source
(origin
(method url-fetch)
(uri (cran-uri "reticulate" version))
(sha256
(base32
"1cyb92dvv9iibsk28i0gm5hm2xqbsn0y6d67id74c8rhai9y8i9v"))))
"0pqr1rcs8yg9nlh729mvlws93cqhpmv49j9bcgarh7vxzkwyv0kb"))))
(build-system r-build-system)
(inputs `(("python" ,python)))
(propagated-inputs
@ -7979,14 +7979,14 @@ terminals that do not support Unicode.")
(define-public r-usethis
(package
(name "r-usethis")
(version "1.4.0")
(version "1.5.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "usethis" version))
(sha256
(base32
"1gadckx3sxz9gxvpkprj9x7zcgg2nz5m4q0vi76ya9li1v03rwwn"))))
"0pn6ka3726psaqlx573g6nxi90apf0rn5m4k2lz1jr66xdc19sag"))))
(build-system r-build-system)
(propagated-inputs
`(("r-clipr" ,r-clipr)
@ -7998,10 +7998,13 @@ terminals that do not support Unicode.")
("r-gh" ,r-gh)
("r-git2r" ,r-git2r)
("r-glue" ,r-glue)
("r-purrr" ,r-purrr)
("r-rlang" ,r-rlang)
("r-rprojroot" ,r-rprojroot)
("r-rstudioapi" ,r-rstudioapi)
("r-whisker" ,r-whisker)))
("r-whisker" ,r-whisker)
("r-withr" ,r-withr)
("r-yaml" ,r-yaml)))
(home-page "https://github.com/r-lib/usethis")
(synopsis "Automate R package and project setup")
(description
@ -8037,14 +8040,14 @@ more information about packages, and where they were installed from.")
(define-public r-remotes
(package
(name "r-remotes")
(version "2.0.2")
(version "2.0.4")
(source
(origin
(method url-fetch)
(uri (cran-uri "remotes" version))
(sha256
(base32
"0rsjxmhwpr51ilsdjfqn06mj8yr2d7nckcn3arv1ljn23qfkpcxa"))))
"1jbn4kjimcr82zv5lnqxqa2487a96vn6jxf7wc6gnpxr6k06d61p"))))
(build-system r-build-system)
(home-page "https://github.com/r-lib/remotes#readme")
(synopsis "R package installation from remote repositories")
@ -8161,14 +8164,14 @@ ways.")
(define-public r-summarytools
(package
(name "r-summarytools")
(version "0.9.2")
(version "0.9.3")
(source
(origin
(method url-fetch)
(uri (cran-uri "summarytools" version))
(sha256
(base32
"1q83kii6prqf9z5v8cxj1q2944kx9x7dcxyqix3m883a94dmgivy"))))
"1wfbkgvicaic37zgpr6zcm4a58yx43p59h0sqggdj44ncqs7147f"))))
(build-system r-build-system)
(propagated-inputs
`(("r-checkmate" ,r-checkmate)
@ -8181,6 +8184,7 @@ ways.")
("r-pryr" ,r-pryr)
("r-rapportools" ,r-rapportools)
("r-rcurl" ,r-rcurl)
("r-tibble" ,r-tibble)
("r-tidyr" ,r-tidyr)))
(home-page "https://github.com/dcomtois/summarytools")
(synopsis "Tools to quickly and neatly summarize data")
@ -10618,14 +10622,14 @@ regression coefficients can be conducted via jackknifing.")
(define-public r-huge
(package
(name "r-huge")
(version "1.3.1")
(version "1.3.2")
(source
(origin
(method url-fetch)
(uri (cran-uri "huge" version))
(sha256
(base32
"06s22i2cdn6g2r8kq5csyspinayh8dxxg9gkwcf4sa1lmrgb0bf9"))))
"1j93gvi1jyq3ld9jhdqhrpm2is54rk3ilmf3yw7fx6gva0y6hjqd"))))
(build-system r-build-system)
(propagated-inputs
`(("r-igraph" ,r-igraph)
@ -11806,14 +11810,14 @@ al. (2010).")
(define-public r-reinforcelearn
(package
(name "r-reinforcelearn")
(version "0.2.0")
(version "0.2.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "reinforcelearn" version))
(sha256
(base32
"0naakmyb14d2cf7cy5ir52qh3bp51gvs6hyhfi3f72yl2jfnnpzg"))))
"176z2q69p24i29a8sh19xxn2zl3h1z2ixdssr5i6m4yvkvdrvv3b"))))
(build-system r-build-system)
(propagated-inputs
`(("r-checkmate" ,r-checkmate)
@ -12721,14 +12725,14 @@ that accept short and long options.")
(define-public r-wgcna
(package
(name "r-wgcna")
(version "1.66")
(version "1.67")
(source
(origin
(method url-fetch)
(uri (cran-uri "WGCNA" version))
(sha256
(base32
"0rhnyhzfn93yp24jz9v6dzrmyizwzdw070a7idm0k33w1cm8sjqv"))))
"09387w85lxvwr8ax2i2h602b4dgfv4wbvsl9aj1q0b1vfs4rkk69"))))
(properties `((upstream-name . "WGCNA")))
(build-system r-build-system)
(propagated-inputs
@ -13860,3 +13864,27 @@ making it possible to download files over HTTPS across platforms. The
@code{RCurl} package provides this functionality (and much more) but has
external dependencies. This package has is implemented purely in R.")
(license license:gpl2)))
(define-public r-rex
(package
(name "r-rex")
(version "1.1.2")
(source
(origin
(method url-fetch)
(uri (cran-uri "rex" version))
(sha256
(base32
"0alsadgjgass3wr8y5d247j12qqzg454sc84vpskclrkmz778g5x"))))
(build-system r-build-system)
(propagated-inputs
`(("r-lazyeval" ,r-lazyeval)
("r-magrittr" ,r-magrittr)))
(home-page "https://github.com/kevinushey/rex")
(synopsis "Friendly regular expressions")
(description
"This package provides a friendly interface for the construction of
regular expressions. Regular expressions are a very powerful feature, however
they are often difficult to interpret. Rex allows you to build complex
regular expressions from human readable expressions")
(license license:expat)))

110
gnu/packages/databases.scm
View File

@ -82,6 +82,7 @@
#:use-module (gnu packages pcre)
#:use-module (gnu packages perl)
#:use-module (gnu packages perl-check)
#:use-module (gnu packages perl-web)
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages popt)
#:use-module (gnu packages python)
@ -984,6 +985,92 @@ for example from a shell script.")
;; others (like sparql-query.c) contain a GPLv2+ license header.
(license (list license:gpl3+))))
(define-public sqitch
(package
(name "sqitch")
(version "0.9999")
(source
(origin
(method url-fetch)
(uri (string-append
"mirror://cpan/authors/id/D/DW/DWHEELER/App-Sqitch-"
version
".tar.gz"))
(sha256
(base32
"1cvj8grs3bzc4g7dw1zc26g4biv1frav18sq0fkvi2kk0q1aigzm"))))
(build-system perl-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(add-before 'check 'set-check-environment
(lambda _
(setenv "TZ" "UTC")
(setenv "HOME" "/tmp")
#t))
(add-after 'install 'wrap-program
(lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(path (getenv "PERL5LIB")))
(wrap-program (string-append out "/bin/sqitch")
`("PERL5LIB" ":" prefix
(,(string-append out "/lib/perl5/site_perl"
":"
path)))))
#t)))))
(native-inputs
`(("perl-capture-tiny" ,perl-capture-tiny)
("perl-io-pager" ,perl-io-pager)
("perl-module-build" ,perl-module-build)
("perl-module-runtime" ,perl-module-runtime)
("perl-path-class" ,perl-path-class)
("perl-test-deep" ,perl-test-deep)
("perl-test-dir" ,perl-test-dir)
("perl-test-exception" ,perl-test-exception)
("perl-test-file" ,perl-test-file)
("perl-test-file-contents" ,perl-test-file-contents)
("perl-test-mockmodule" ,perl-test-mockmodule)
("perl-test-nowarnings" ,perl-test-nowarnings)
("perl-test-warn" ,perl-test-warn)))
(inputs
`(("perl-class-xsaccessor" ,perl-class-xsaccessor)
("perl-clone" ,perl-clone)
("perl-config-gitlike" ,perl-config-gitlike)
("perl-datetime" ,perl-datetime)
("perl-datetime-timezone" ,perl-datetime-timezone)
("perl-dbd-pg" ,perl-dbd-pg)
("perl-dbi" ,perl-dbi)
("perl-devel-stacktrace" ,perl-devel-stacktrace)
("perl-encode-locale" ,perl-encode-locale)
("perl-file-homedir" ,perl-file-homedir)
("perl-hash-merge" ,perl-hash-merge)
("perl-ipc-run3" ,perl-ipc-run3)
("perl-ipc-system-simple" ,perl-ipc-system-simple)
("perl-libintl-perl" ,perl-libintl-perl)
("perl-list-moreutils" ,perl-list-moreutils)
("perl-moo" ,perl-moo)
("perl-mysql-config" ,perl-mysql-config)
("perl-namespace-autoclean" ,perl-namespace-autoclean)
("perl-path-class" ,perl-path-class)
("perl-perlio-utf8_strict" ,perl-perlio-utf8_strict)
("perl-string-formatter" ,perl-string-formatter)
("perl-string-shellquote" ,perl-string-shellquote)
("perl-sub-exporter" ,perl-sub-exporter)
("perl-template-tiny" ,perl-template-tiny)
("perl-template-toolkit" ,perl-template-toolkit)
("perl-throwable" ,perl-throwable)
("perl-try-tiny" ,perl-try-tiny)
("perl-type-tiny" ,perl-type-tiny)
("perl-type-tiny-xs" ,perl-type-tiny-xs)
("perl-uri" ,perl-uri)
("perl-uri-db" ,perl-uri-db)))
(home-page "https://sqitch.org/")
(synopsis "Database change management tool")
(description
"Sqitch is a standalone change management system for database schemas,
which uses SQL to describe changes.")
(license license:x11)))
(define-public sqlcrush
;; Unfortunately, there is no proper upstream release and may never be.
(let ((commit "b5f6868f189566a26eecc78d0f0659813c1aa98a")
@ -1319,6 +1406,29 @@ module, and nothing else.")
(license license:perl-license)
(home-page "https://metacpan.org/release/DBD-SQLite")))
(define-public perl-mysql-config
(package
(name "perl-mysql-config")
(version "1.04")
(source
(origin
(method url-fetch)
(uri (string-append
"mirror://cpan/authors/id/D/DA/DARREN/MySQL-Config-"
version
".tar.gz"))
(sha256
(base32
"1svn7ccw2gc4cazvc58j84rxhnc9vs01zpird0l8460598j475qr"))))
(build-system perl-build-system)
(home-page "https://metacpan.org/release/MySQL-Config")
(synopsis "Parse and utilize MySQL's /etc/my.cnf and ~/.my.cnf files")
(description
"@code{MySQL::Config} emulates the @code{load_defaults} function from
libmysqlclient. It will fill an aray with long options, ready to be parsed by
@code{Getopt::Long}.")
(license license:perl-license)))
(define-public perl-sql-abstract
(package
(name "perl-sql-abstract")

6
gnu/packages/dc.scm
View File

@ -1,6 +1,6 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2014 Sree Harsha Totakura <sreeharsha@totakura.in>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
;;;
;;; This file is part of GNU Guix.
;;;
@ -33,14 +33,14 @@
(define-public ncdc
(package
(name "ncdc")
(version "1.20")
(version "1.21")
(source
(origin
(method url-fetch)
(uri (string-append "http://dev.yorhel.nl/download/ncdc-" version
".tar.gz"))
(sha256 (base32
"0ccn7dqbqpqsbglqyalz32c20rjvf1pw0zr88jyvd2b2vxbqi6ca"))))
"10hrk7pcvfl9cj6d0kr4qf3l068ikqhccbg7lf25pr2kln9lz412"))))
(build-system gnu-build-system)
(inputs
`(("bzip2" ,bzip2)

20
gnu/packages/debug.scm
View File

@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2014, 2015, 2016, 2017 Eric Bavier <bavier@member.fsf.org>
;;; Copyright © 2014, 2015, 2016, 2017, 2019 Eric Bavier <bavier@member.fsf.org>
;;; Copyright © 2016, 2017, 2018 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018, 2019 Rutger Helling <rhelling@mykolab.com>
@ -92,11 +92,10 @@ program to exhibit a bug.")
;; home-page pointing to a bsd-2 license.
(license bsd-3)))
;; Newer versions depend on LLVM and Clang >= 4, which have yet to be packaged.
(define-public c-reduce
(package
(name "c-reduce")
(version "2.6.0")
(version "2.8.0")
(source
(origin
(method url-fetch)
@ -105,12 +104,12 @@ program to exhibit a bug.")
"creduce-" version ".tar.gz")))
(sha256
(base32
"0pf5q0n8vkdcr1wrkxn2jzxv0xkrir13bwmqfw3jpbm3dh2c3b6d"))))
"1vqx73ymfscvlyig03972a5m7ar3gx2yv6m8c6h2mibz792j5xkp"))))
(build-system gnu-build-system)
(inputs
`(("astyle" ,astyle)
("llvm" ,llvm-3.9.1)
("clang" ,clang-3.9.1)
("llvm" ,llvm-6)
("clang" ,clang-6)
("flex" ,flex)
("indent" ,indent)
("perl" ,perl)
@ -118,11 +117,16 @@ program to exhibit a bug.")
("file-which" ,perl-file-which)
("getopt-tabular" ,perl-getopt-tabular)
("regex-common" ,perl-regexp-common)
("sys-cpu" ,perl-sys-cpu)
("term-readkey" ,perl-term-readkey)))
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(with-directory-excursion "tests"
;; Running all tests can take a looong time, and tests 4 and 5
;; require frama-c or kcc. So run just one for sanity.
(invoke "./run_tests" "1"))))
(add-after 'install 'set-load-paths
(lambda* (#:key inputs outputs #:allow-other-keys)
;; Tell creduce where to find the perl modules it needs.
@ -137,7 +141,7 @@ program to exhibit a bug.")
,(package-version perl)))
'("term-readkey" "exporter-lite"
"file-which" "getopt-tabular"
"regex-common" "sys-cpu")))))
"regex-common")))))
#t)))))
(home-page "https://embed.cs.utah.edu/creduce")
(synopsis "Reducer for interesting code")

174
gnu/packages/dlang.scm
View File

@ -3,7 +3,7 @@
;;; Copyright © 2015, 2018 Pjotr Prins <pjotr.guix@thebird.nl>
;;; Copyright © 2017 Frederick Muriithi <fredmanglis@gmail.com>
;;; Copyright © 2017 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2017, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
;;;
;;; This file is part of GNU Guix.
;;;
@ -81,15 +81,15 @@ and freshness without requiring additional information from the user.")
(package
(name "ldc")
(version "0.17.4")
(source (origin
(method url-fetch)
(uri (string-append
"https://github.com/ldc-developers/ldc/archive/v"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"1kw0j378k6bh0k66dvx99bjq8ilp8bb24w3jrmibn8rhmqv0d5q8"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/ldc-developers/ldc.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0nnrjavfmpfp7bib04isqlxvyzh6mlvsdan0gxysdz96hlg4hcq8"))))
(build-system cmake-build-system)
(supported-systems '("x86_64-linux" "i686-linux" "armhf-linux"))
(properties
@ -101,11 +101,15 @@ and freshness without requiring additional information from the user.")
(modify-phases %standard-phases
(add-after 'unpack 'unpack-submodule-sources
(lambda* (#:key inputs #:allow-other-keys)
(let ((unpack (lambda (source target)
(with-directory-excursion target
(invoke "tar" "xvf"
(assoc-ref inputs source)
"--strip-components=1")))))
(let ((unpack (lambda (input target)
(let ((source (assoc-ref inputs input)))
;; Git checkouts are directories as long as
;; there are no patches; tarballs otherwise.
(if (file-is-directory? source)
(copy-recursively source target)
(with-directory-excursion target
(invoke "tar" "xvf" source
"--strip-components=1")))))))
(unpack "phobos-src" "runtime/phobos")
(unpack "druntime-src" "runtime/druntime")
(unpack "dmd-testsuite-src" "tests/d2/dmd-testsuite")
@ -147,32 +151,32 @@ and freshness without requiring additional information from the user.")
("unzip" ,unzip)
("phobos-src"
,(origin
(method url-fetch)
(uri (string-append
"https://github.com/ldc-developers/phobos/archive/ldc-v"
version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/ldc-developers/phobos.git")
(commit (string-append "ldc-v" version))))
(file-name (git-file-name "phobos" version))
(sha256
(base32
"16x36kp46mqiihxx7jvr1d3mv3b96yfmhinb9lzinh2m4clr85wz"))
(base32 "0i7gh99w4mi0hdv16261jcdiqyv1nkjdcwy9prw32s0lvplx8fdy"))
(patches (search-patches "ldc-bootstrap-disable-tests.patch"))))
("druntime-src"
,(origin
(method url-fetch)
(uri (string-append
"https://github.com/ldc-developers/druntime/archive/ldc-v"
version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/ldc-developers/druntime.git")
(commit (string-append "ldc-v" version))))
(file-name (git-file-name "druntime" version))
(sha256
(base32
"0iw2xxhcbsc5f1707dgdzhff528363l4faqdk513gaxs2dhfx8vx"))))
(base32 "0alabm3bbvs94msvxz5psiwk4f51cw9h82z1p5hhsnf8ja6d0am7"))))
("dmd-testsuite-src"
,(origin
(method url-fetch)
(uri (string-append
"https://github.com/ldc-developers/dmd-testsuite/archive/ldc-v"
version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/ldc-developers/dmd-testsuite.git")
(commit (string-append "ldc-v" version))))
(file-name (git-file-name "dmd-testsuite" version))
(sha256
(base32
"0z6ch930wjkg2vlnqkbliwxxxifad6ydsdpwdxwnajkb2kaxsjx4"))))))
(base32 "05qr4cgb4scfqzbw1l5pk72kil074mvj9d55b165ljyr51sgwgbl"))))))
(home-page "http://wiki.dlang.org/LDC")
(synopsis "LLVM-based compiler for the D programming language")
(description
@ -195,28 +199,33 @@ bootstrapping more recent compilers written in D.")
(inherit ldc-bootstrap)
(name "ldc")
(version "1.10.0")
(source (origin
(method url-fetch)
(uri (string-append
"https://github.com/ldc-developers/ldc/archive/v"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"16b1h9kwfggjw6ykc6sfs26ak6vypylsx9wmvp5m6x3cvi6g70yi"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/ldc-developers/ldc.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0qcb2rn01wql7y8qp31blbv3hwmnh3zjgzi2n7k168cxr6rrdhlp"))))
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'unpack-submodule-sources
(lambda* (#:key inputs #:allow-other-keys)
(let ((unpack (lambda (source target)
(with-directory-excursion target
(invoke "tar" "xvf"
(assoc-ref inputs source)
"--strip-components=1")))))
(let ((unpack (lambda (input target)
(let ((source (assoc-ref inputs input)))
;; Git checkouts are directories as long as
;; there are no patches; tarballs otherwise.
(if (file-is-directory? source)
(copy-recursively source target)
(with-directory-excursion target
(invoke "tar" "xvf" source
"--strip-components=1")))))))
(unpack "phobos-src" "runtime/phobos")
(unpack "druntime-src" "runtime/druntime")
(unpack "dmd-testsuite-src" "tests/d2/dmd-testsuite"))))
(unpack "dmd-testsuite-src" "tests/d2/dmd-testsuite")
#t)))
(add-after 'unpack-submodule-sources 'patch-phobos
(lambda* (#:key inputs #:allow-other-keys)
(substitute* '("runtime/phobos/std/process.d"
@ -224,7 +233,7 @@ bootstrapping more recent compilers written in D.")
(("/bin/sh") (which "sh"))
(("echo") (which "echo")))
(substitute* "tests/d2/dmd-testsuite/Makefile"
(("/bin/bash") (which "bash")))
(("/bin/bash") (which "bash")))
;; disable unittests in the following files. We are discussing with
;; upstream
(substitute* '("runtime/phobos/std/net/curl.d"
@ -241,14 +250,14 @@ bootstrapping more recent compilers written in D.")
(delete-file "tests/plugins/addFuncEntryCall/testPlugin.d")
;; the following tests requires AVX instruction set in the CPU.
(substitute* "tests/d2/dmd-testsuite/runnable/test_cdvecfill.d"
(("^// DISABLED: ") "^// DISABLED: linux64 "))
(("^// DISABLED: ") "^// DISABLED: linux64 "))
#t))
(replace 'check
(lambda* (#:key inputs outputs #:allow-other-keys)
;; some tests call into gdb binary which needs SHELL and CC set
(setenv "SHELL" (which "sh"))
(setenv "CC" (string-append (assoc-ref inputs "gcc") "/bin/gcc"))
(invoke "make" "test" "-j" (number->string (parallel-job-count))))))))
(lambda* (#:key inputs outputs #:allow-other-keys)
;; some tests call into gdb binary which needs SHELL and CC set
(setenv "SHELL" (which "sh"))
(setenv "CC" (string-append (assoc-ref inputs "gcc") "/bin/gcc"))
(invoke "make" "test" "-j" (number->string (parallel-job-count))))))))
(native-inputs
`(("llvm" ,llvm-6)
("clang" ,clang-6)
@ -259,13 +268,13 @@ bootstrapping more recent compilers written in D.")
("gdb" ,gdb)
("phobos-src"
,(origin
(method url-fetch)
(uri (string-append
"https://github.com/ldc-developers/phobos/archive/ldc-v"
older-version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/ldc-developers/phobos.git")
(commit (string-append "ldc-v" older-version))))
(file-name (git-file-name "phobos" older-version))
(sha256
(base32
"0cpmrww00xf1qx38bcc22rr05qw41p00p45yb5fbwnfaccfwdn0s"))
(base32 "1gmlwnjdcf6s5aahadxsif9l5nyaj0rrn379g6fmhcvdk64kf509"))
;; This patch deactivates some tests that depend on network access
;; to pass. It also deactivates some tests that have some reliance
;; on timezone.
@ -278,36 +287,37 @@ bootstrapping more recent compilers written in D.")
(patches (search-patches "ldc-disable-phobos-tests.patch"))))
("druntime-src"
,(origin
(method url-fetch)
(uri (string-append
"https://github.com/ldc-developers/druntime/archive/ldc-v"
older-version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/ldc-developers/druntime.git")
(commit (string-append "ldc-v" older-version))))
(file-name (git-file-name "druntime" older-version))
(sha256
(base32
"1akh2vdi98jih8642yjbvv2vavxzrmq24kz8i3kfidg5ndqyv222"))))
(base32 "0a3yyjcnpvm5fbdczf76fx08kl154w17w06hlxf0j3p1p4jc85aj"))))
("dmd-testsuite-src"
,(origin
(method url-fetch)
(uri (string-append
"https://github.com/ldc-developers/dmd-testsuite/archive/ldc-v"
older-version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/ldc-developers/dmd-testsuite.git")
(commit (string-append "ldc-v" older-version))))
(file-name (git-file-name "dmd-testsuite" older-version))
(sha256
(base32
"0z5x07qrbkpksshaymp11ir6jlmg9wjicxn6zhp8cya6i1ha9p99")))))))))
(base32 "0mm3rliki1nqiqfaha7ssvm156aa398vpvf4v6895m7nn1mz7rss")))))))))
(define-public dub
(package
(name "dub")
(version "1.7.2")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/dlang/dub/archive/"
"v" version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"1jvr1mmq8j77wnsrsg7x2xv8yfljqd6x8gn6yy7dd6h6y3cf408q"))))
(build-system gnu-build-system)
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/dlang/dub.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "073ibvgm1gphcqs1yjrav9ryp677nh3b194nxmvicwgvdc0sb6w9"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; it would have tested itself by installing some packages (vibe etc)
#:phases

32
gnu/packages/dns.scm
View File

@ -569,23 +569,21 @@ Extensions} (DNSSEC).")
(define-public knot
(package
(name "knot")
(version "2.8.0")
(source (origin
(method url-fetch)
(uri (string-append "https://secure.nic.cz/files/knot-dns/"
"knot-" version ".tar.xz"))
(sha256
(base32
"1vw7xx7bm440jwrpvdd04vrp6ccz2b11swcn9msvs62hf0kdjjj9"))
(patches
(search-patches "knot-include-system-lmdb-header.patch"))
(modules '((guix build utils)))
(snippet
'(begin
;; Delete bundled libraries.
(with-directory-excursion "src/contrib"
(delete-file-recursively "lmdb"))
#t))))
(version "2.8.1")
(source
(origin
(method url-fetch)
(uri (string-append "https://secure.nic.cz/files/knot-dns/"
"knot-" version ".tar.xz"))
(sha256
(base32 "1im2wb8hl394mzni1wavmvfqd7il8s28kcz8w3s4v05nbhzg06xj"))
(modules '((guix build utils)))
(snippet
'(begin
;; Delete bundled libraries.
(with-directory-excursion "src/contrib"
(delete-file-recursively "lmdb"))
#t))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)))

6
gnu/packages/docker.scm
View File

@ -43,7 +43,7 @@
#:use-module (gnu packages version-control)
#:use-module (gnu packages virtualization))
(define %docker-version "18.09.3")
(define %docker-version "18.09.5")
(define-public python-docker-py
(package
@ -241,7 +241,7 @@ network attachments.")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "06yr5xwr181lalh8z1lk07nxlp7hn38aq8cyqjk617dfy4lz0ixx"))
(base32 "0cirpd9l2qazp2jyanwzvrkx2m98nksjdvn43ff38p89w6133ipb"))
(patches
(search-patches "docker-engine-test-noinstall.patch"
"docker-fix-tests.patch"
@ -487,7 +487,7 @@ provisioning etc.")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "09j1i668p330gjz5vw5pss8ghxh1mz7rl2q9ykp02q9p112zhy4j"))))
(base32 "0mxxjzkwdny8p2dmyjich7x1gn7hdlfppzjy2skk2k5bwv7nxpmi"))))
(build-system go-build-system)
(arguments
`(#:import-path "github.com/docker/cli"

3350
gnu/packages/emacs-xyz.scm
View File

File diff suppressed because it is too large Load Diff

6
gnu/packages/emacs.scm
View File

@ -2,7 +2,7 @@
;;; Copyright © 2013, 2014, 2015, 2016, 2017 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2013 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2014 Taylan Ulrich Bayirli/Kammer <taylanbayirli@gmail.com>
;;; Copyright © 2014, 2015, 2016, 2017, 2018 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2014, 2015, 2016, 2017, 2018, 2019 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2014, 2015, 2016, 2017 Alex Kost <alezost@gmail.com>
;;; Copyright © 2016, 2018 Arun Isaac <arunisaac@systemreboot.net>
;;; Copyright © 2016 Federico Beffa <beffa@fbengineering.ch>
@ -68,14 +68,14 @@
(define-public emacs
(package
(name "emacs")
(version "26.1")
(version "26.2")
(source (origin
(method url-fetch)
(uri (string-append "mirror://gnu/emacs/emacs-"
version ".tar.xz"))
(sha256
(base32
"0b6k1wq44rc8gkvxhi1bbjxbz3cwg29qbq8mklq2az6p1hjgrx0w"))
"13n5m60i47k96mpv5pp6km2ph9rv2m5lmbpzj929v02vpsfyc70m"))
(patches (search-patches "emacs-exec-path.patch"
"emacs-fix-scheme-indent-function.patch"
"emacs-source-date-epoch.patch"))

2
gnu/packages/embedded.scm
View File

@ -1013,6 +1013,8 @@ SPI, I2C, JTAG.")
"uptools/atcmd/atinterf.c")
(("/opt/freecalypso/loadtools")
(string-append (assoc-ref outputs "out") "/lib/freecalypso/loadtools"))
(("\\$\\{INSTALL_PREFIX\\}/loadtools")
(string-append (assoc-ref outputs "out") "/lib/freecalypso/loadtools"))
(("/opt/freecalypso")
(assoc-ref outputs "out")))
#t)))))

162
gnu/packages/emulators.scm
View File

@ -466,13 +466,13 @@ and Game Boy Color games.")
(version "2.5")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/mupen64plus/mupen64plus-core/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/mupen64plus/mupen64plus-core.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "0dg2hksm5qni2hcha93k7n4fqr92888p946f7phb0ndschzfh9kk"))))
(base32 "116fndl6652zrp1r6ag4xv3dzp1x52mlvadj8xwflq07fd5rhri1"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)
@ -514,13 +514,13 @@ core library.")
(version "2.5")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/mupen64plus/mupen64plus-audio-sdl/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/mupen64plus/mupen64plus-audio-sdl.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "0ss6w92n2rpfnazhg9lbq0nvs3fqx93nliz3k3wjxdlx4dpi7h3a"))))
(base32 "0z19amfg9vr2pqjjri1ipc7hs681fzjcnb0f9y7bjhp5n8d7p6bb"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)
@ -560,13 +560,13 @@ SDL audio plugin.")
(version "2.5")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/mupen64plus/mupen64plus-input-sdl/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/mupen64plus/mupen64plus-input-sdl.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "11sj5dbalp2nrlmki34vy7wy28vc175pnnkdk65p8599hnyq37ri"))))
(base32 "1dyazfbdjycdfslq8jixqiqhziw0rlkvach2r9dz91229jmkyc9c"))))
(build-system gnu-build-system)
(native-inputs
`(("which" ,which)))
@ -605,13 +605,13 @@ SDL input plugin.")
(version "2.5")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/mupen64plus/mupen64plus-rsp-hle/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/mupen64plus/mupen64plus-rsp-hle.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "15h7mgz6xd2zjzm6l3f96sbs8kwr3xvbwzgikhnka79m6c69hsxv"))))
(base32 "0pi31qzjjp7aypdvvnz6ms18g09c4gqzxi6328zj8sji94b75gf0"))))
(build-system gnu-build-system)
(inputs
`(("mupen64plus-core" ,mupen64plus-core)))
@ -647,13 +647,13 @@ high-level emulation (HLE) RSP processor plugin.")
(version "2.0.0")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/mupen64plus/mupen64plus-rsp-z64/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/mupen64plus/mupen64plus-rsp-z64.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "10jz1w2dhx5slhyk4m8mdqlpsd6cshchslr1fckb2ayzb1ls3ghi"))))
(base32 "0nfyjns9k8xbg3aqs7593nfaxvlj72h3l8h467442xlk8ajfcylx"))))
(build-system gnu-build-system)
(inputs
`(("mupen64plus-core" ,mupen64plus-core)))
@ -689,13 +689,13 @@ Z64 RSP processor plugin.")
(version "2.0.0")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/mupen64plus/mupen64plus-video-arachnoid/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/mupen64plus/mupen64plus-video-arachnoid.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "0jjwf144rihznm4lnqbhgigxw664v3v32wy94adaa6imk8z6gslh"))))
(base32 "1v9fqwpb6pawr8z5cm2ki7bqkks4iyr5c4jy4v5khj6h8zcv55gc"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)
@ -735,13 +735,13 @@ Arachnoid video plugin.")
(version "2.0.0")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/mupen64plus/mupen64plus-video-glide64/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/mupen64plus/mupen64plus-video-glide64.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "1rm55dbf6xgsq1blbzs6swa2ajv0qkn38acbljj346abnk6s3dla"))))
(base32 "0qn5za7g7796kh2ag3xpmhbqg0yf71g9liz6ks0rha8pz73lgs01"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)
@ -789,13 +789,13 @@ Glide64 video plugin.")
(version "2.5")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/mupen64plus/mupen64plus-video-glide64mk2/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/mupen64plus/mupen64plus-video-glide64mk2.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "1ihl4q293d6svba26b4mhapjcdg12p90gibz79b4mx423jlcxxj9"))))
(base32 "08pm28a36dpr0cvr8pzw0n5ksdazp7jqvlmqfy2lwb4dm0cwhkqd"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)
@ -839,13 +839,13 @@ Glide64MK2 video plugin.")
(version "2.5")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/mupen64plus/mupen64plus-video-rice/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/mupen64plus/mupen64plus-video-rice.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "0rd2scjmh285w61aj3mgx71whg5rqrjbry3cdgicczrnyvf8wdvk"))))
(base32 "0rpmbcq67gsj5h5jjis146378qc1mskskvx20y1ikx59yhbamh13"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)
@ -887,13 +887,13 @@ Rice Video plugin.")
(version "2.0.0")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/mupen64plus/mupen64plus-video-z64/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/mupen64plus/mupen64plus-video-z64.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "1x7wsjs5gx2iwx20p4cjcbf696zsjlh31qxmghwv0ifrq8x58s1b"))
(base32 "04qa2fdd6dakpk2v0d4l80xh9b4h8gm71g80c0wyyxdhmhwk1r9c"))
(patches (search-patches "mupen64plus-video-z64-glew-correct-path.patch"))))
(build-system gnu-build-system)
(native-inputs
@ -942,13 +942,13 @@ Z64 video plugin.")
(version "2.5")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/mupen64plus/mupen64plus-ui-console/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/mupen64plus/mupen64plus-ui-console.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "04qkpd8ic7xsgnqz7spl00wxdygf79m7d1k8rabbygjk5lg6p8z2"))
(base32 "0vrf98qa6a0y3647kslsv644fag233dxh5dcr1yncjiiwickcr5a"))
(patches (search-patches "mupen64plus-ui-console-notice.patch"))))
(build-system gnu-build-system)
(native-inputs
@ -1005,21 +1005,21 @@ towards a working Mupen64Plus for casual users.")
(package
(name "nestopia-ue")
(version "1.48")
(source (origin
(method url-fetch)
(uri (string-append
"https://github.com/rdanbrook/nestopia/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"184y05z4k4a4m4022niy625kan0rklh8gcxyynxli1fss2sjjrpv"))
(modules '((guix build utils)))
(snippet
'(begin
;; We don't need libretro for the GNU/Linux build.
(delete-file-recursively "libretro")
#t))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/rdanbrook/nestopia.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "19c8vx5yxbysl0sszk5blfngwacshdgwbf44g1qaxvq8ywiyxmb4"))
(modules '((guix build utils)))
(snippet
'(begin
;; We don't need libretro for the GNU/Linux build.
(delete-file-recursively "libretro")
#t))))
(build-system cmake-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)))

56
gnu/packages/engineering.scm
View File

@ -9,7 +9,7 @@
;;; Copyright © 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018 Clément Lassieur <clement@lassieur.org>
;;; Copyright © 2018, 2019 Jonathan Brielmaier <jonathan.brielmaier@web.de>
;;; Copyright © 2018 Arun Isaac <arunisaac@systemreboot.net>
;;; Copyright © 2018, 2019 Arun Isaac <arunisaac@systemreboot.net>
;;; Copyright © 2019 Tim Stahel <swedneck@swedneck.xyz>
;;;
;;; This file is part of GNU Guix.
@ -2008,3 +2008,57 @@ editors.")
slicing software to x3g files for standalone 3D printing on common 3D
printers.")
(license license:gpl2+)))
(define-public gnucap
(package
(name "gnucap")
(version "20171003")
(source
(origin
(method url-fetch)
(uri (string-append "https://git.savannah.gnu.org/cgit/gnucap.git/snapshot/gnucap-"
version ".tar.gz"))
(sha256
(base32
"16m09xa685qhj5fqq3bcgakrwnb74xhf5f7rpqkkf9fg8plzbb1g"))))
(build-system gnu-build-system)
(inputs
`(("readline" ,readline)))
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'configure
(lambda* (#:key outputs #:allow-other-keys)
(let ((out (assoc-ref outputs "out")))
;; Set correct rpath so that gnucap finds libgnucap.so.
(substitute* (list "apps/configure" "lib/configure"
"main/configure" "modelgen/configure")
(("LDFLAGS =")
(string-append "LDFLAGS = -Wl,-rpath=" out "/lib")))
;; gnucap uses a hand-written configure script that expects the
;; --prefix argument to be the first argument passed to it.
(invoke "./configure" (string-append "--prefix=" out)))))
(replace 'check
(lambda* (#:key outputs #:allow-other-keys)
(let ((out (assoc-ref outputs "out"))
(libpath "../lib/O:../apps/O"))
(with-directory-excursion "tests"
;; Make test return non-zero exit code when a test fails.
(substitute* "test"
(("/bin/sh") "/bin/sh -e")
(("\\|\\| echo \"\\*\\*\\*\\* \\$ii fails \\*\\*\\*\\*\"") ""))
;; Fix expected plugin search path for test c_attach.1.gc
(substitute* "==out/c_attach.1.gc.out"
(("/usr/local/lib/gnucap")
(string-append libpath ":" out "/lib/gnucap")))
;; Set library path so that gnucap can find libgnucap.so
;; while running the tests.
(setenv "LD_LIBRARY_PATH" libpath)
(invoke "./test" "../main/O/gnucap" "" "test-output" "==out"))))))))
(home-page "https://www.gnu.org/software/gnucap/")
(synopsis "Mixed analog and digital circuit simulator")
(description "GNUcap is a circuit analysis package. It offers a general
purpose circuit simulator and can perform DC and transient analyses, fourier
analysis and AC analysis. The engine is designed to do true mixed-mode
simulation.")
(license license:gpl3+)))

2
gnu/packages/file-systems.scm
View File

@ -322,7 +322,7 @@ network. LIBNFS offers three different APIs, for different use :
`(("bzip2" ,bzip2)
("fuse" ,fuse)
("zlib" ,zlib)))
(synopsis "Read-only FUSE driver for the APFS filesystem")
(synopsis "Read-only FUSE driver for the APFS file system")
(description "APFS-FUSE is a read-only FUSE driver for the @dfn{Apple File
System} (APFS). It is currently in an experimental state — it may not be able
to read all files, and it does not support all the compression methods in

16
gnu/packages/finance.scm
View File

@ -390,7 +390,7 @@ other machines/servers. Electrum does not download the Bitcoin blockchain.")
(package
(inherit electrum)
(name "electron-cash")
(version "3.3.6")
(version "4.0.1")
(source
(origin
(method url-fetch)
@ -401,7 +401,7 @@ other machines/servers. Electrum does not download the Bitcoin blockchain.")
".tar.gz"))
(sha256
(base32
"110apc376wm4yd9ghpffiipwdn8rzyr3z7ncpp2516wbz4mmyhxc"))
"16fi03f23yb5r9s64x1a9wrxnvivlbawvrbq4d486yclzl1r7y48"))
(modules '((guix build utils)))
(snippet
'(begin
@ -627,7 +627,7 @@ Monero GUI client.")
(define-public python-trezor-agent
(package
(name "python-trezor-agent")
(version "0.13.0")
(version "0.13.1")
(source
(origin
(method git-fetch)
@ -636,7 +636,7 @@ Monero GUI client.")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0i4igkxi8fwdlbhg6nx27lhnc9v9nmrw4j5fvpnc202n6yjlc7x7"))))
(base32 "0q99vbfd3h85s8rnjipnmldixabqmmlk5w9karv6f0rhyi54f4zv"))))
(build-system python-build-system)
(arguments
`(#:phases
@ -733,14 +733,14 @@ Ledger Blue/Nano S.")
(define-public python-trezor
(package
(name "python-trezor")
(version "0.11.1")
(version "0.11.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "trezor" version))
(sha256
(base32
"064yds8f4px0c6grkkanpdjx022g4q87ihzhkmdv9qanv0hz6hv0"))))
"1f0zfki12mnhidkfxpx2lpq1xim8f35i2d64bx9lf4m26xxv9x56"))))
(build-system python-build-system)
(arguments
`(#:phases
@ -779,14 +779,14 @@ TREZOR Hardware Wallet.")
(define-public python-keepkey
(package
(name "python-keepkey")
(version "6.0.2")
(version "6.0.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "keepkey" version))
(sha256
(base32
"16j8hnxj9r4b2w6kfncmny09pb1al8ppmn59qxzl3qmh1xhpy45g"))))
"0z3d0m6364v9dv0njs4cd5m5ai6j6v35xaaxfxl90m9vmyxy81vd"))))
(build-system python-build-system)
(arguments
`(#:phases

23
gnu/packages/firmware.scm
View File

@ -377,7 +377,7 @@ Virtual Machines. OVMF contains a sample UEFI firmware for QEMU and KVM.")
(define* (make-arm-trusted-firmware platform #:optional (arch "aarch64"))
(package
(name (string-append "arm-trusted-firmware-" platform))
(version "1.5")
(version "2.1")
(source
(origin
(method git-fetch)
@ -388,7 +388,7 @@ Virtual Machines. OVMF contains a sample UEFI firmware for QEMU and KVM.")
(file-name (git-file-name "arm-trusted-firmware" version))
(sha256
(base32
"1gm0bn2llzfzz9bfsz11fhwxj5lxvyrq7bc13fjj033nljzxn7k8"))))
"1gy5qskrjy8n3kxdcm1dx8b45l5b75n0pm8pq80wl6xic1ycy24r"))))
(build-system gnu-build-system)
(arguments
`(#:phases
@ -448,25 +448,10 @@ such as:
license:bsd-2)))) ; libfdt
(define-public arm-trusted-firmware-sun50i-a64
(let ((base (make-arm-trusted-firmware "sun50i_a64"))
;; Use unreleased version which enables additional features needed for
;; LCD support
(commit "98aab97484b27e40aa74a93e5d1c1ac037a7e0b8")
(revision "2"))
(let ((base (make-arm-trusted-firmware "sun50i_a64")))
(package
(inherit base)
(name "arm-trusted-firmware-sun50i-a64")
(version (git-version "2.0" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/ARM-software/arm-trusted-firmware.git")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"0z5si034vcn4m68zaixc5v8fs1c7vxbh7n4hggxs55p0jg01dan5")))))))
(name "arm-trusted-firmware-sun50i-a64"))))
(define-public arm-trusted-firmware-puma-rk3399
(let ((base (make-arm-trusted-firmware "rk3399"))

9
gnu/packages/flashing-tools.scm
View File

@ -127,15 +127,14 @@ brick your device.")
(define-public avrdude
(package
(name "avrdude")
(version "6.1")
(version "6.3")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://savannah/avrdude/avrdude-"
version ".tar.gz"))
(sha256
(base32
"0frxg0q09nrm95z7ymzddx7ysl77ilfbdix1m81d9jjpiv5bm64y"))))
(base32 "15m1w1qad3dj7r8n5ng1qqcaiyx1gyd6hnc3p2apgjllccdp77qg"))))
(build-system gnu-build-system)
(inputs
`(("libelf" ,libelf)
@ -148,8 +147,8 @@ brick your device.")
(synopsis "AVR downloader and uploader")
(description
"AVRDUDE is a utility to download/upload/manipulate the ROM and
EEPROM contents of AVR microcontrollers using the in-system programming
technique (ISP).")
EEPROM contents of AVR microcontrollers using the @acronym{ISP, in-system
programming} technique.")
(license license:gpl2+)))
(define-public dfu-programmer

40
gnu/packages/freedesktop.scm
View File

@ -54,12 +54,14 @@
#:use-module (gnu packages docbook)
#:use-module (gnu packages documentation)
#:use-module (gnu packages gettext)
#:use-module (gnu packages ghostscript)
#:use-module (gnu packages gl)
#:use-module (gnu packages glib) ;intltool
#:use-module (gnu packages gnome)
#:use-module (gnu packages gperf)
#:use-module (gnu packages graphviz)
#:use-module (gnu packages gtk)
#:use-module (gnu packages image)
#:use-module (gnu packages libffi)
#:use-module (gnu packages libunwind)
#:use-module (gnu packages libusb)
@ -74,6 +76,7 @@
#:use-module (gnu packages python-xyz)
#:use-module (gnu packages sqlite)
#:use-module (gnu packages valgrind)
#:use-module (gnu packages video)
#:use-module (gnu packages w3m)
#:use-module (gnu packages web)
#:use-module (gnu packages xdisorg)
@ -628,7 +631,7 @@ applications, X servers (rootless or fullscreen) or other display servers.")
(define-public weston
(package
(name "weston")
(version "5.0.0")
(version "6.0.0")
(source (origin
(method url-fetch)
(uri (string-append
@ -636,30 +639,40 @@ applications, X servers (rootless or fullscreen) or other display servers.")
"weston-" version ".tar.xz"))
(sha256
(base32
"1bsc9ry566mpk6fdwkqpvwq2j7m79d9cvh7d3lgf6igsphik98hm"))))
(build-system gnu-build-system)
"04p6hal5kalmdp5dxwh2h5qhkkb4dvbsk7l091zvvcq70slj6qsl"))))
(build-system meson-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)
("xorg-server" ,xorg-server)))
(inputs
`(("cairo" ,cairo-xcb)
("colord" ,colord)
("dbus" ,dbus)
("elogind" ,elogind)
("lcms" ,lcms)
("libevdev" ,libevdev)
("libinput" ,libinput-minimal)
("libjpeg" ,libjpeg)
("libunwind" ,libunwind)
("libva" ,libva)
("libwebp" ,libwebp)
("libxcursor" ,libxcursor)
("libxkbcommon" ,libxkbcommon)
("libxml2" ,libxml2)
("mesa" ,mesa)
("mtdev" ,mtdev)
("linux-pam" ,linux-pam)
("pango" ,pango)
("wayland" ,wayland)
("wayland-protocols" ,wayland-protocols)
("xorg-server-xwayland" ,xorg-server-xwayland)))
(arguments
`(#:configure-flags
(list "--disable-setuid-install"
"--enable-systemd-login"
(string-append "--with-xserver-path="
(list "-Dbackend-rdp=false" ; TODO: Enable.
"-Dremoting=false" ; TODO: Enable.
"-Dsimple-dmabuf-drm=auto"
"-Dsystemd=false"
(string-append "-Dxwayland-path="
(assoc-ref %build-inputs "xorg-server-xwayland")
"/bin/Xwayland"))
#:parallel-tests? #f ; Parallel tests cause failures.
@ -668,8 +681,8 @@ applications, X servers (rootless or fullscreen) or other display servers.")
(add-before 'configure 'use-elogind
(lambda _
;; Use elogind instead of systemd
(substitute* "configure"
(("libsystemd-login >= 198") "libelogind"))
(substitute* "libweston/meson.build"
(("libsystemd-login") "libelogind"))
(substitute* '("libweston/launcher-logind.c"
"libweston/weston-launch.c")
(("#include <systemd/sd-login.h>")
@ -677,7 +690,8 @@ applications, X servers (rootless or fullscreen) or other display servers.")
#t))
(add-after 'configure 'patch-confdefs.h
(lambda _
(system "echo \"#define HAVE_SYSTEMD_LOGIN_209 1\" >> confdefs.h")))
(system "echo \"#define HAVE_SYSTEMD_LOGIN_209 1\" >> confdefs.h")
#t))
(add-before 'check 'setup
(lambda _
(setenv "HOME" (getcwd))
@ -906,7 +920,7 @@ interfaces, based on the useradd, usermod and userdel commands.")
(define-public libmbim
(package
(name "libmbim")
(version "1.18.0")
(version "1.18.2")
(source (origin
(method url-fetch)
(uri (string-append
@ -914,7 +928,7 @@ interfaces, based on the useradd, usermod and userdel commands.")
name "-" version ".tar.xz"))
(sha256
(base32
"10mjjy860aakfd3h1yaj9l1jw816amrpwmyqlx37j21xv0l03x3c"))))
"0s4jsfsydp2vykv7lnimalp9i680aas1qcx7zdpjiic64b5g48vp"))))
(build-system gnu-build-system)
(native-inputs
`(("glib:bin" ,glib "bin") ; for glib-mkenums
@ -937,7 +951,7 @@ which speak the Mobile Interface Broadband Model (MBIM) protocol.")
(define-public libqmi
(package
(name "libqmi")
(version "1.22.2")
(version "1.22.4")
(source (origin
(method url-fetch)
(uri (string-append
@ -945,7 +959,7 @@ which speak the Mobile Interface Broadband Model (MBIM) protocol.")
"libqmi-" version ".tar.xz"))
(sha256
(base32
"09w20dsgr16bgbqw5ds7r6j2s6ihwyalh9zpbjhcn7cvm0afbwgi"))))
"1wgrrb9vb3myl8xgck8ik86876ycbg8crylybs3ssi21vrxqwnsc"))))
(build-system gnu-build-system)
(inputs
`(("libgudev" ,libgudev)))

32
gnu/packages/game-development.scm
View File

@ -6,7 +6,7 @@
;;; Copyright © 2015, 2016, 2017 David Thompson <davet@gnu.org>
;;; Copyright © 2016, 2017, 2018, 2019 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016, 2017 Kei Kebreau <kkebreau@posteo.net>
;;; Copyright © 2016, 2018 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2016, 2018, 2019 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2016, 2017, 2018 Julian Graham <joolean@gmail.com>
;;; Copyright © 2017, 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2017 Manolis Fragkiskos Ragkousis <manolis837@gmail.com>
@ -1404,3 +1404,33 @@ Fenix.")
(description "This package contains a collection of modules for the Bennu
Game Developement programming language, from CD handling through SDL to
joystick support.")))
(define-public plib
(package
(name "plib")
(version "1.8.5")
(source (origin
(method url-fetch)
(uri (string-append "http://plib.sourceforge.net/dist/"
"plib-" version ".tar.gz"))
(sha256
(base32
"0cha71mflpa10vh2l7ipyqk67dq2y0k5xbafwdks03fwdyzj4ns8"))))
(build-system gnu-build-system)
(inputs
`(("mesa" ,mesa)
("libxi" ,libxi)
("libxmu" ,libxmu)))
(native-inputs
`(("pkg-config" ,pkg-config)))
(home-page "http://plib.sourceforge.net/")
(synopsis "Suite of portable game libraries")
(description "PLIB is a set of libraries that will permit programmers to
write games and other realtime interactive applications that are 100% portable
across a wide range of hardware and operating systems. PLIB includes sound
effects, music, a complete 3D engine, font rendering, a simple Windowing
library, a game scripting language, a GUI, networking, 3D math library and a
collection of handy utility functions. All are 100% portable across nearly
all modern computing platforms. Each library component is fairly independent
of the others")
(license license:lgpl2.0+)))

206
gnu/packages/games.scm
View File

@ -3542,12 +3542,19 @@ Linux / Mac OS X servers, and an auto mapper with a VT100 map display.")
(inputs
`(("lablgtk" ,lablgtk)
("ocaml" ,ocaml)
("ocaml-findlib" ,ocaml-findlib)))
("ocaml-findlib" ,ocaml-findlib)
("ocamlbuild" ,ocamlbuild)))
(arguments
'(#:phases
(modify-phases %standard-phases
(delete 'configure)
(add-before 'build 'setenv
(add-before 'build 'allow-unsafe-strings
;; Fix a build failure with ocaml >=4.06.0.
;; See <https://github.com/sgimenez/laby/issues/53>.
(lambda _
(setenv "OCAMLPARAM" "safe-string=0,_")
#t))
(add-before 'build 'set-library-path
(lambda* (#:key inputs #:allow-other-keys)
(let ((lablgtk (assoc-ref inputs "lablgtk")))
(setenv "LD_LIBRARY_PATH"
@ -6765,3 +6772,198 @@ a procedurally generated world, the player can explore thousands of rooms in
search of powerful artifacts, tools to help them, and to eventually free the
Orcus Dome from evil.")
(license license:gpl3+)))
(define-public marble-marcher
(let ((commit "e580460a0c3826f9b28ab404607942a8ecb625d7")
(revision "1"))
(package
(name "marble-marcher")
(version (git-version "0" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/HackerPoet/MarbleMarcher.git")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"0jjv832hl1v170n6gryp2sr3lgqndi9ab841qvgqk68bks8701mx"))))
(build-system cmake-build-system)
(arguments
`(#:tests? #f ; there are none
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'embed-asset-directory
(lambda* (#:key outputs #:allow-other-keys)
(let ((assets (string-append (assoc-ref outputs "out")
"/share/marble-marcher/assets/")))
;; Some of the files we're patching are
;; ISO-8859-1-encoded, so choose it as the default
;; encoding so the byte encoding is preserved.
(with-fluids ((%default-port-encoding #f))
(substitute* "src/Resource.rc"
(("../assets/icon.ico")
(string-append assets "icon.ico")))
(substitute* "src/Res.h"
(("assets/") assets))))
#t))
(replace 'install
(lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(assets (string-append out "/share/marble-marcher/assets"))
(bin (string-append out "/bin/")))
(mkdir-p bin)
(mkdir-p assets)
(copy-recursively "../source/assets" assets)
(install-file "MarbleMarcher" bin))
#t)))))
(inputs
`(("eigen" ,eigen)
("mesa" ,mesa)
("sfml" ,sfml)))
(native-inputs
`(("pkg-config" ,pkg-config)))
(home-page "https://codeparade.itch.io/marblemarcher")
(synopsis "Guide a marble across fractal landscapes")
(description "Marble Marcher is a video game that uses a fractal physics
engine and fully procedural rendering to produce beautiful and unique
gameplay. The game is played on the surface of evolving fractals. The goal
of the game is to get your marble to the flag as quickly as possible. But be
careful not to fall off the level or get crushed by the fractal! There are 24
levels to unlock.")
;; Code is under GPLv2+, assets are under CC-BY-SA 3.0 and OFL 1.1.
(license (list license:gpl2+
license:silofl1.1
license:cc-by-sa3.0)))))
;; This must be updated together with flightgear.
(define simgear
(package
(name "simgear")
(version "2018.3.2")
(source (origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/flightgear/release-"
(version-major+minor version) "/"
"simgear-" version ".tar.bz2"))
(sha256
(base32
"1941ay8rngz4vwsx37bbpxr48hpcvcbj3xw1hy264lq4qnl99c68"))))
(build-system cmake-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
;; Skip tests that require internet access.
(invoke "ctest" "-E" "(http|dns)"))))))
(inputs
`(("boost" ,boost-for-mysql) ; fails with 1.69
("curl" ,curl)
("expat" ,expat)
("mesa" ,mesa)
("openal" ,openal)
("openscenegraph" ,openscenegraph-3.4)
("zlib" ,zlib)))
(home-page "https://home.flightgear.org/")
(synopsis "Libraries for 3D simulations and games")
(description "SimGear is a set of libraries designed to be used as
building blocks for quickly assembling 3D simulations, games, and
visualization applications. SimGear is developed by the FlightGear project
and also provides the base for the FlightGear Flight Simulator.")
(license license:lgpl2.0+)))
(define-public flightgear
(package
(name "flightgear")
(version (package-version simgear))
(source (origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/flightgear/release-"
(version-major+minor version) "/"
"flightgear-" version ".tar.bz2"))
(sha256
(base32
"0lzy524cjzs8vldcjcc750bgg5c4mq9fkymxxxzqf68ilc4d1jss"))
(modules '((guix build utils)))
(snippet
'(begin
;; There are some bundled libraries.
(for-each delete-file-recursively
'("3rdparty/sqlite3/"))
#t))))
(build-system cmake-build-system)
(arguments
`(#:configure-flags
(list "-DSYSTEM_SQLITE=ON"
(string-append "-DFG_DATA_DIR="
(assoc-ref %outputs "out")
"/share/flightgear"))
;; TODO: test cannot be run because the "run_test_suite" executable
;; does not seem to be built.
#:tests? #f
#:phases
(modify-phases %standard-phases
(add-after 'install 'wrap-executable
(lambda* (#:key inputs outputs #:allow-other-keys)
(let ((out (assoc-ref outputs "out")))
(wrap-program (string-append out "/bin/fgfs")
`("QT_PLUGIN_PATH" ":" prefix
,(map (lambda (label)
(string-append (assoc-ref inputs label)
"/lib/qt5/plugins"))
'("qtbase" "qtdeclarative" "qtsvg")))
`("QML2_IMPORT_PATH" ":" prefix
,(map (lambda (label)
(string-append (assoc-ref inputs label)
"/lib/qt5/qml"))
'("qtdeclarative" "qtsvg"))))
#t)))
(add-after 'install 'install-data
(lambda* (#:key inputs outputs #:allow-other-keys)
(let ((share (string-append (assoc-ref outputs "out") "/share/flightgear")))
(mkdir-p share)
(with-directory-excursion share
(invoke "tar" "xf" (assoc-ref inputs "flightgear-data")
"--strip-components=1")))
#t)))))
(inputs
`(("boost" ,boost-for-mysql) ; same as simgear
("dbus" ,dbus)
("eudev" ,eudev)
("freeglut" ,freeglut)
("freetype" ,freetype)
("glew" ,glew)
("libpng" ,libpng)
("openal" ,openal)
("openscenegraph" ,openscenegraph-3.4)
("plib" ,plib)
("qtbase" ,qtbase)
("qtdeclarative" ,qtdeclarative)
("qtsvg" ,qtsvg)
("simgear" ,simgear)
("speexdsp" ,speexdsp)
("sqlite" ,sqlite)
("zlib" ,zlib)))
(native-inputs
`(("cppunit" ,cppunit)
("pkg-config" ,pkg-config)
("qttools" ,qttools)
("flightgear-data"
,(origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/flightgear/release-"
(version-major+minor version) "/"
"FlightGear-" version "-data.tar.bz2"))
(sha256
(base32
"0h4npa7gqpf5fw6pv2bpw0wbwr7fa2vhia21cjbigfgd75x82zi7"))))))
(home-page "https://home.flightgear.org/")
(synopsis "Flight simulator")
(description "The goal of the FlightGear project is to create a
sophisticated flight simulator framework for use in research or academic
environments, pilot training, as an industry engineering tool, for DIY-ers to
pursue their favorite interesting flight simulation idea, and last but
certainly not least as a fun, realistic, and challenging desktop flight
simulator.")
(license license:gpl2+)))

62
gnu/packages/geo.scm
View File

@ -746,14 +746,14 @@ to create databases that are optimized for rendering/tile/map-services.")
(name "libosmium")
(version "2.14.2")
(source
(origin
(method url-fetch)
(uri (string-append "https://github.com/osmcode/libosmium/archive/v"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"0d9b46qiw7zkw1h9lygjdwqxnbhm3c7v8kydzw9f9f778cyagc94"))))
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/osmcode/libosmium.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "123ri1l0a2b9fljgpwsl7z2w4i3kmgxz79d4ns9z4mwbp8sw0250"))))
(build-system cmake-build-system)
(propagated-inputs
`(("boost" ,boost)
@ -776,20 +776,21 @@ OpenStreetMap data.")
(package
(name "osm2pgsql")
(version "0.96.0")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/openstreetmap/osm2pgsql/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"08y7776r4l9v9177a4q6cfdri0lpirky96m6g699hwl7v1vhw0mn"))
(modules '((guix build utils)))
(snippet
'(begin
(delete-file-recursively "contrib/protozero")
(delete-file-recursively "contrib/libosmium")
#t))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/openstreetmap/osm2pgsql.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "032cydh8ynaqfhdzmkvgbmqyjql668y6qln1l59l2s3ni9963bbl"))
(modules '((guix build utils)))
(snippet
'(begin
(delete-file-recursively "contrib/protozero")
(delete-file-recursively "contrib/libosmium")
#t))))
(build-system cmake-build-system)
(arguments
`(#:tests? #f; tests fail because we need to setup a database
@ -823,14 +824,15 @@ map, geocoding with Nominatim, or general analysis.")
(package
(name "tippecanoe")
(version "1.31.5")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/mapbox/tippecanoe/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"1057na1dkgjaryr7jr15lqkxpam111d3l5zdpdkqzzzpxmdjxqcf"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/mapbox/tippecanoe.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "1m0x931a945sr7axyhcvpwh798m58hx1zxh6ikgf9gsgqhdhmszz"))))
(build-system gnu-build-system)
(arguments
`(#:phases

6
gnu/packages/gimp.scm
View File

@ -118,7 +118,7 @@ buffers.")
(define-public gimp
(package
(name "gimp")
(version "2.10.8")
(version "2.10.10")
(source (origin
(method url-fetch)
(uri (string-append "https://download.gimp.org/pub/gimp/v"
@ -126,7 +126,7 @@ buffers.")
"/gimp-" version ".tar.bz2"))
(sha256
(base32
"16sb4kslwin2jbgdb4nhks78pd0af8mvj8g5hap3hj946p7w2jfq"))))
"0xwck5nbpb945s1cyij3kfqw1pchbhx8i5vf5hgywyjw4r1z5l8j"))))
(build-system gnu-build-system)
(outputs '("out"
"doc")) ; 9 MiB of gtk-doc HTML
@ -368,5 +368,5 @@ MyPaint.")
"This package provides resynthesizer plugins for GIMP, which encompasses
tools for healing selections (content-aware fill), enlarging the canvas and
healing the border, increasing the resolution while adding detail, and
transfering the style of an image.")
transferring the style of an image.")
(license license:gpl3+)))

14
gnu/packages/gnome.scm
View File

@ -2666,7 +2666,7 @@ libxml to ease remote use of the RESTful API.")
(define-public libsoup
(package
(name "libsoup")
(version "2.66.0")
(version "2.66.1")
(source (origin
(method url-fetch)
(uri (string-append "mirror://gnome/sources/libsoup/"
@ -2674,7 +2674,7 @@ libxml to ease remote use of the RESTful API.")
name "-" version ".tar.xz"))
(sha256
(base32
"08c9kkdhzy504gv23pfdm4sq3dd3j20sikwz6gv0qrwcdjnw5bai"))))
"1zs3bhspwg7fggxd7x1rrggpkcf2j9ch6dhncq9syh252z0vcb2a"))))
(build-system meson-build-system)
(outputs '("out" "doc"))
(arguments
@ -4309,15 +4309,15 @@ work and the interface is well tested.")
(define-public eolie
(package
(name "eolie")
(version "0.9.52")
(version "0.9.60")
(source (origin
(method url-fetch)
(uri (string-append "https://gitlab.gnome.org/World/eolie/"
"uploads/d95bf72958276c80dfaca8cce0e4e92c/"
"uploads/3b2ceb7eb15860587db6886bfdd8a91e/"
"eolie-" version ".tar.xz"))
(sha256
(base32
"1s3b0rkm8sxmhzzi624snzqvz61i1rja5wxyzw6jg2kcdjcylwln"))))
"1s9gkzxa6457v6bh0q8n1ijq1chd2jwgvhk5kppsnya7kxvsx8qh"))))
(build-system meson-build-system)
(arguments
`(#:glib-or-gtk? #t
@ -4378,9 +4378,9 @@ a secret password store, an adblocker, and a modern UI.")
(version "3.28.3.1")
(source (origin
(method url-fetch)
(uri (string-append "mirror://gnome/sources/" name "/"
(uri (string-append "mirror://gnome/sources/epiphany/"
(version-major+minor version) "/"
name "-" version ".tar.xz"))
"epiphany-" version ".tar.xz"))
(sha256
(base32
"1xz6xl6b0iihvczyr0cs1z5ifvpai6anb4m0ng1caiph06klc1b9"))))

28
gnu/packages/graphics.scm
View File

@ -2,7 +2,7 @@
;;; Copyright © 2015, 2016 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2015 Tomáš Čech <sleep_walker@gnu.org>
;;; Copyright © 2016 Leo Famulari <leo@famulari.name>
;;; Copyright © 2016, 2017 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2016, 2017, 2019 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2016, 2018 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2017 Manolis Fragkiskos Ragkousis <manolis837@gmail.com>
@ -538,6 +538,32 @@ virtual reality, scientific visualization and modeling.")
;; LGPL 2.1, but with 4 exceptions. This version is called OSGPL.
(license license:lgpl2.1)))
;; We need this for simgear
(define-public openscenegraph-3.4
(package (inherit openscenegraph)
(name "openscenegraph")
(version "3.4.1")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/openscenegraph/OpenSceneGraph")
(commit (string-append "OpenSceneGraph-" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1fbzg1ihjpxk6smlq80p3h3ggllbr16ihd2fxpfwzam8yr8yxip9"))))
(arguments
(substitute-keyword-arguments (package-arguments openscenegraph)
((#:configure-flags flags)
`(cons
;; The jpeg plugin requires conversion between integers and booleans
"-DCMAKE_CXX_FLAGS=-fpermissive"
,flags))))
(inputs
`(("libjpeg" ,libjpeg)
,@(package-inputs openscenegraph)))))
(define-public povray
(package
(name "povray")

51
gnu/packages/guile-xyz.scm
View File

@ -17,7 +17,7 @@
;;; Copyright © 2017 ng0 <ng0@n0.is>
;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018 Maxim Cournoyer <maxim.cournoyer@gmail.com>
;;; Copyright © 2018 Arun Isaac <arunisaac@systemreboot.net>
;;; Copyright © 2018, 2019 Arun Isaac <arunisaac@systemreboot.net>
;;; Copyright © 2018 Pierre-Antoine Rouby <pierre-antoine.rouby@inria.fr>
;;; Copyright © 2018 Eric Bavier <bavier@member.fsf.org>
;;; Copyright © 2019 swedebugia <swedebugia@riseup.net>
@ -898,33 +898,30 @@ tracker's SOAP service, such as @url{https://bugs.gnu.org}.")
(license license:gpl3+)))
(define-public guile-email
(let ((commit "fa52eac55e5946db89621a6c583d2aa357864dee")
(revision "1"))
(package
(name "guile-email")
(version (git-version "0.1.0" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://git.systemreboot.net/guile-email")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1037mbz7qd9bzaqp8ysyhnl9ipd97fmj3b9jr8qfzx9179vvsj63"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)
("autoconf" ,autoconf)
("automake" ,automake)))
(inputs
`(("guile" ,guile-2.2)))
(home-page "https://git.systemreboot.net/guile-email")
(synopsis "Guile email parser")
(description "This package provides an email parser written in pure
(package
(name "guile-email")
(version "0.1.0")
(source
(origin
(method url-fetch)
(uri (string-append
"https://git.systemreboot.net/guile-email/snapshot/guile-email-"
version ".tar.xz"))
(sha256
(base32
"0p2v8q2kkz8m6vf2rsjvz3dj1mvnx7dxakjf72dwkndbgk3rp79f"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)
("autoconf" ,autoconf)
("automake" ,automake)))
(inputs
`(("guile" ,guile-2.2)))
(home-page "https://git.systemreboot.net/guile-email")
(synopsis "Guile email parser")
(description "This package provides an email parser written in pure
Guile.")
(license license:agpl3+))))
(license license:agpl3+)))
(define-public guile-debbugs-next
(let ((commit "75a331d561c8b6f8efcf16216dab961c17759efe")

24
gnu/packages/haskell.scm
View File

@ -2,7 +2,7 @@
;;; Copyright © 2015, 2016 Federico Beffa <beffa@fbengineering.ch>
;;; Copyright © 2015 Siniša Biđin <sinisa@bidin.eu>
;;; Copyright © 2015 Paul van der Walt <paul@denknerd.org>
;;; Copyright © 2015 Eric Bavier <bavier@member.fsf.org>
;;; Copyright © 2015, 2019 Eric Bavier <bavier@member.fsf.org>
;;; Copyright © 2016, 2018, 2019 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2016, 2017 ng0 <ng0@n0.is>
;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il>
@ -833,6 +833,28 @@ code pages on Windows. On all other operating systems, the library does
nothing.")
(license license:bsd-3)))
(define-public ghc-libffi
(package
(name "ghc-libffi")
(version "0.1")
(source
(origin
(method url-fetch)
(uri (string-append "https://hackage.haskell.org/package/"
"libffi/libffi-" version ".tar.gz"))
(sha256
(base32
"0g7jnhng3j7z5517aaqga0144aamibsbpgm3yynwyfzkq1kp0f28"))))
(build-system haskell-build-system)
(native-inputs `(("pkg-config" ,pkg-config)))
(inputs `(("libffi" ,libffi)))
(home-page "http://hackage.haskell.org/package/libffi")
(synopsis "Haskell binding to libffi")
(description
"A binding to libffi, allowing C functions of types only known at runtime
to be called from Haskell.")
(license license:bsd-3)))
(define-public ghc-newtype-generics
(package
(name "ghc-newtype-generics")

36
gnu/packages/idris.scm
View File

@ -2,6 +2,7 @@
;;; Copyright © 2015 Paul van der Walt <paul@denknerd.org>
;;; Copyright © 2016, 2017 David Craven <david@craven.ch>
;;; Copyright © 2018 Alex ter Weele <alex.ter.weele@gmail.com>
;;; Copyright © 2019 Eric Bavier <bavier@member.fsf.org>
;;;
;;; This file is part of GNU Guix.
;;;
@ -19,11 +20,14 @@
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
(define-module (gnu packages idris)
#:use-module (gnu packages)
#:use-module (gnu packages haskell)
#:use-module (gnu packages haskell-check)
#:use-module (gnu packages haskell-web)
#:use-module (gnu packages libffi)
#:use-module (gnu packages multiprecision)
#:use-module (gnu packages ncurses)
#:use-module (gnu packages perl)
#:use-module (guix build-system gnu)
#:use-module (guix build-system haskell)
#:use-module (guix download)
@ -34,7 +38,7 @@
(define-public idris
(package
(name "idris")
(version "1.3.0")
(version "1.3.1")
(source (origin
(method url-fetch)
(uri (string-append
@ -42,8 +46,14 @@
"idris-" version "/idris-" version ".tar.gz"))
(sha256
(base32
"1w5i2z88li4niykwc6yrgxgfp25ll6ih95cip0ri7d8i7ik03c48"))))
"0fn9h58l592j72njwma1ia48h8h87wi2rjqfxs7j2lfmvgfv18fi"))
(patches (search-patches "idris-test-no-node.patch"))))
(build-system haskell-build-system)
(native-inputs ;For tests
`(("perl" ,perl)
("ghc-tasty" ,ghc-tasty)
("ghc-tasty-golden" ,ghc-tasty-golden)
("ghc-tasty-rerun" ,ghc-tasty-rerun)))
(inputs
`(("gmp" ,gmp)
("ncurses" ,ncurses)
@ -60,6 +70,7 @@
("ghc-fingertree" ,ghc-fingertree)
("ghc-fsnotify" ,ghc-fsnotify)
("ghc-ieee754" ,ghc-ieee754)
("ghc-libffi" ,ghc-libffi)
("ghc-megaparsec" ,ghc-megaparsec)
("ghc-network" ,ghc-network)
("ghc-optparse-applicative" ,ghc-optparse-applicative)
@ -75,21 +86,16 @@
("ghc-vector-binary-instances" ,ghc-vector-binary-instances)
("ghc-zip-archive" ,ghc-zip-archive)))
(arguments
`(#:tests? #f ; FIXME: Test suite doesn't run in a sandbox.
#:configure-flags
`(#:configure-flags
(list (string-append "--datasubdir="
(assoc-ref %outputs "out") "/lib/idris"))
(assoc-ref %outputs "out") "/lib/idris")
"-fFFI" "-fGMP")
#:phases
(modify-phases %standard-phases
(add-before 'configure 'set-cc-command
(lambda _
(setenv "CC" "gcc")
#t))
(add-before 'configure 'update-constraints
(lambda _
(substitute* "idris.cabal"
(("aeson >= 0\\.6 && < 1\\.3")
"aeson >= 0.6 && < 1.4"))))
(add-after 'install 'fix-libs-install-location
(lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
@ -99,7 +105,15 @@
(lambda (module)
(symlink (string-append modules "/" module)
(string-append lib "/" module)))
'("prelude" "base" "contrib" "effects" "pruviloj"))))))))
'("prelude" "base" "contrib" "effects" "pruviloj")))))
(delete 'check) ;Run check later
(add-after 'install 'check
(lambda* (#:key outputs #:allow-other-keys #:rest args)
(let ((out (assoc-ref outputs "out")))
(setenv "TASTY_NUM_THREADS" (number->string (parallel-job-count)))
(setenv "IDRIS_CC" "gcc") ;Needed for creating executables
(setenv "PATH" (string-append out "/bin:" (getenv "PATH")))
(apply (assoc-ref %standard-phases 'check) args)))))))
(native-search-paths
(list (search-path-specification
(variable "IDRIS_LIBRARY_PATH")

22
gnu/packages/java.scm
View File

@ -4027,16 +4027,18 @@ complex transformations and code analysis tools.")
(package
(name "java-cglib")
(version "3.2.4")
(source (origin
(method url-fetch)
(uri (string-append
"https://github.com/cglib/cglib/archive/RELEASE_"
(string-map (lambda (c) (if (char=? c #\.) #\_ c)) version)
".tar.gz"))
(file-name (string-append "cglib-" version ".tar.gz"))
(sha256
(base32
"162dvd4fln76ai8prfharf66pn6r56p3sxx683j5vdyccrd5hi1q"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/cglib/cglib.git")
(commit (string-append
"RELEASE_"
(string-map (lambda (c) (if (char=? c #\.) #\_ c))
version)))))
(file-name (git-file-name name version))
(sha256
(base32 "186451jms2zfp47yd8kxd77az2cqal1my2br7klgyp8fpl4qfg8v"))))
(build-system ant-build-system)
(arguments
`(;; FIXME: tests fail because junit runs

3
gnu/packages/kodi.scm
View File

@ -281,7 +281,8 @@ alternatives. In compilers, this can reduce the cascade of secondary errors.")
(sha256
(base32
"1w26aqvzxv4c70gcd1vw1pldapsc2xcacwq9b7dqx5m44j0zx1dc"))
(patches (search-patches "kodi-skip-test-449.patch"))
(patches (search-patches "kodi-skip-test-449.patch"
"kodi-set-libcurl-ssl-parameters.patch"))
(snippet
'(begin
(use-modules (guix build utils))

79
gnu/packages/linux.scm
View File

@ -118,6 +118,7 @@
#:use-module (guix build-system gnu)
#:use-module (guix build-system python)
#:use-module (guix build-system trivial)
#:use-module (guix build-system linux-module)
#:use-module (guix download)
#:use-module (guix git-download)
#:use-module ((guix licenses) #:prefix license:)
@ -264,9 +265,7 @@ for ARCH and optionally VARIANT, or #f if there is no such configuration."
(search-auxiliary-file file)))
(define %default-extra-linux-options
`(;; https://lists.gnu.org/archive/html/guix-devel/2014-04/msg00039.html
("CONFIG_DEVPTS_MULTIPLE_INSTANCES" . #t)
;; Modules required for initrd:
`(;; Modules required for initrd:
("CONFIG_NET_9P" . m)
("CONFIG_NET_9P_VIRTIO" . m)
("CONFIG_VIRTIO_BLK" . m)
@ -401,7 +400,7 @@ for ARCH and optionally VARIANT, or #f if there is no such configuration."
(kmod (assoc-ref (or native-inputs inputs) "kmod")))
;; Install kernel image, kernel configuration and link map.
(for-each (lambda (file) (install-file file out))
(find-files "." "^(\\.config|bzImage|zImage|Image|vmlinuz|System\\.map)$"))
(find-files "." "^(\\.config|bzImage|zImage|Image|vmlinuz|System\\.map|Module\\.symvers)$"))
;; Install device tree files
(unless (null? (find-files "." "\\.dtb$"))
(mkdir-p dtbdir)
@ -438,6 +437,28 @@ It has been modified to remove all non-free binary blobs.")
#:patches %linux-libre-5.0-patches
#:configuration-file kernel-config))
(define-public vhba-module
(package
(name "vhba-module")
(version "20170610")
(source (origin
(method url-fetch)
(uri (string-append
"http://downloads.sourceforge.net/cdemu/vhba-module-"
version ".tar.bz2"))
(sha256
(base32
"1v6r0bgx0a65vlh36b1l2965xybngbpga6rp54k4z74xk0zwjw3r"))))
(build-system linux-module-build-system)
(arguments
;; TODO: No tests?
`(#:tests? #f))
(home-page "https://cdemu.sourceforge.io/")
(synopsis "Kernel module that emulates SCSI devices")
(description "VHBA module provides a Virtual (SCSI) HBA, which is the link
between the CDemu userspace daemon and linux kernel.")
(license license:gpl2+)))
(define %linux-libre-4.19-version "4.19.34")
(define %linux-libre-4.19-hash "0rmpyj2qb651p2k2srpjndjxry87hr5vq0jkk4rvxjhm5y3sb65l")
@ -471,7 +492,13 @@ It has been modified to remove all non-free binary blobs.")
(make-linux-libre "4.4.178"
"1lgsd760md6b32qb5ng3anfq1n754a9d0c4xnf2mjxkimncb1jpp"
'("x86_64-linux" "i686-linux")
#:configuration-file kernel-config))
#:configuration-file kernel-config
#:extra-options
(append
`(;; https://lists.gnu.org/archive/html/guix-devel/2014-04/msg00039.html
;; This option was removed upstream in version 4.7.
("CONFIG_DEVPTS_MULTIPLE_INSTANCES" . #t))
%default-extra-linux-options)))
(define-public linux-libre-arm-generic
(make-linux-libre %linux-libre-version
@ -1452,14 +1479,14 @@ Linux-based operating systems.")
(define-public bridge-utils
(package
(name "bridge-utils")
(version "1.5")
(source (origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/bridge/bridge/"
"bridge-utils-" version ".tar.gz"))
(sha256
(base32
"12367cwqmi0yqphi6j8rkx97q8hw52yq2fx4k0xfclkcizxybya2"))))
(version "1.6")
(source
(origin
(method url-fetch)
(uri (string-append "https://www.kernel.org/pub/linux/utils/net/"
"bridge-utils/bridge-utils-" version ".tar.xz"))
(sha256
(base32 "1j16kr44csyr4yqxly26l1yw2bh4nkiasgwvask2i2gvsnsyyryc"))))
(build-system gnu-build-system)
;; The tarball lacks all the generated files.
@ -2467,18 +2494,18 @@ country-specific regulations for the wireless spectrum.")
(define-public lm-sensors
(package
(name "lm-sensors")
(version "3.4.0")
(source (origin
(method url-fetch)
(uri (list (string-append
"https://github.com/groeck/lm-sensors/archive/V"
(string-join (string-split version #\.) "-")
".tar.gz")))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"0knb09s9lvx0wzfsaizx3xq58q6kllqf7nkbwvir0wkgn31c2d73"))
(patches (search-patches "lm-sensors-hwmon-attrs.patch"))))
(version "3.5.0")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/groeck/lm-sensors.git")
(commit (string-append "V" (string-join
(string-split version #\.) "-")))))
(file-name (git-file-name name version))
(sha256
(base32 "1mdrnb9r01z1xfdm6dpkywvf9yy9a4yzb59paih9sijwmigv19fj"))
(patches (search-patches "lm-sensors-hwmon-attrs.patch"))))
(build-system gnu-build-system)
(inputs `(("rrdtool" ,rrdtool)
("perl" ,perl)
@ -2535,7 +2562,7 @@ country-specific regulations for the wireless spectrum.")
(string-append (assoc-ref inputs "coreutils")
"/bin/readlink -f")))
#t)))))
(home-page "http://jdelvare.nerim.net/devel.html#lmsensors")
(home-page "https://hwmon.wiki.kernel.org/lm_sensors")
(synopsis "Utilities to read temperature/voltage/fan sensors")
(description
"Lm-sensors is a hardware health monitoring package for Linux. It allows

166
gnu/packages/lisp.scm
View File

@ -13,6 +13,7 @@
;;; Copyright © 2018 Pierre Neidhardt <mail@ambrevar.xyz>
;;; Copyright © 2018 Pierre Langlois <pierre.langlois@gmx.com>
;;; Copyright © 2019 Katherine Cox-Buday <cox.katherine.e@gmail.com>
;;; Copyright © 2019 Jesse Gildersleve <jessejohngildersleve@protonmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
@ -691,13 +692,13 @@ portable between implementations.")
(version "1.2")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/sionescu/fiveam/archive/v"
version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/sionescu/fiveam.git")
(commit (string-append "v" version))))
(file-name (git-file-name "fiveam" version))
(sha256
(base32 "0f48pcbhqs3wwwzjl5nk57d4hcbib4l9xblxc66b8c2fhvhmhxnv"))
(file-name (string-append "fiveam-" version ".tar.gz"))))
(base32 "1yx9716mk8pq9076q6cjx4c9lyax3amiccy37sh0913k2x8gsm4l"))))
(inputs `(("alexandria" ,sbcl-alexandria)))
(build-system asdf-build-system/sbcl)
(synopsis "Common Lisp testing framework")
@ -714,18 +715,18 @@ interactive development model in mind.")
(sbcl-package->ecl-package sbcl-fiveam))
(define-public sbcl-bordeaux-threads
(let ((commit "354abb0ae9f1d9324001e1a8abab3128d7420e0e")
(let ((commit "5dce49fbc829f4d136a734f5ef4f5d599660984f")
(revision "1"))
(package
(name "sbcl-bordeaux-threads")
(version (git-version "0.8.5" revision commit))
(version (git-version "0.8.6" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/sionescu/bordeaux-threads.git")
(commit commit)))
(sha256
(base32 "1hcfp21l6av1xj6z7r77sp6h4mwf9vvx4s745803sysq2qy2mwnq"))
(base32 "1gkh9rz7zw57n3110ikcf4835950wr4hgp8l79id5ai6nd86x7wv"))
(file-name
(git-file-name "bordeaux-threads" version))))
(inputs `(("alexandria" ,sbcl-alexandria)))
@ -818,14 +819,21 @@ logical continuation of Stefil. It focuses on interactive debugging.")
(version "1.0.16")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/edicl/flexi-streams/archive/v"
version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/edicl/flexi-streams.git")
(commit (string-append "v" version))))
(file-name (git-file-name "flexi-streams" version))
(sha256
(base32 "1fb0jrwxr5c3i2lhy7kn30m1n0vggfzwjm1dacx6y5wf9wfsbamw"))
(file-name (string-append "flexi-streams-" version ".tar.gz"))))
(base32 "0gvykjlmja060zqq6nn6aqxlshh6r6ijahmmgf20q0d839rwpgxc"))))
(build-system asdf-build-system/sbcl)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'make-git-checkout-writable
(lambda _
(for-each make-file-writable (find-files "."))
#t)))))
(inputs `(("trivial-gray-streams" ,sbcl-trivial-gray-streams)))
(synopsis "Implementation of virtual bivalent streams for Common Lisp")
(description "Flexi-streams is an implementation of \"virtual\" bivalent
@ -848,13 +856,13 @@ streams which are similar to string streams.")
(version "2.0.11")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/edicl/cl-ppcre/archive/v"
version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/edicl/cl-ppcre.git")
(commit (string-append "v" version))))
(file-name (git-file-name "cl-ppcre" version))
(sha256
(base32 "1i7daxf0wnydb0pgwiym7qh2wy70n14lxd6dyv28sy0naa8p31gd"))
(file-name (string-append "cl-ppcre-" version ".tar.gz"))))
(base32 "0q3iany07vgqm144lw6pj0af2d3vsikpbkwcxr30fci3kzsq4f49"))))
(build-system asdf-build-system/sbcl)
(native-inputs `(("flexi-streams" ,sbcl-flexi-streams)))
(synopsis "Portable regular expression library for Common Lisp")
@ -973,18 +981,19 @@ from other CLXes around the net.")
(package
(name "stumpwm")
(version "18.11")
(source (origin
(method url-fetch)
(uri (string-append
"https://github.com/stumpwm/stumpwm/archive/"
version ".tar.gz"))
(sha256
(base32 "177gxfk4c127i9crghx6fmkipznhgylvzgnjb2pna38g21gg6s39"))
(file-name (string-append "stumpwm-" version ".tar.gz"))
(patches
;; This patch is included in the post-18.11 git master tree
;; and can be removed when we move to the next release.
(search-patches "stumpwm-fix-broken-read-one-line.patch"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/stumpwm/stumpwm.git")
(commit version)))
(file-name (git-file-name "stumpwm" version))
(sha256
(base32 "003g1fmh7446ws49866kzny4lrk1wf034dq5fa4m9mq1nzc7cwv7"))
(patches
;; This patch is included in the post-18.11 git master tree
;; and can be removed when we move to the next release.
(search-patches "stumpwm-fix-broken-read-one-line.patch"))))
(build-system asdf-build-system/sbcl)
(native-inputs `(("fiasco" ,sbcl-fiasco)
("texinfo" ,texinfo)))
@ -1604,13 +1613,13 @@ utilities that make it even easier to manipulate text in Common Lisp. It has
(version "0.8")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/trivial-features/trivial-features/archive/v"
version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/trivial-features/trivial-features.git")
(commit (string-append "v" version))))
(file-name (git-file-name "trivial-features" version))
(sha256
(base32 "0db1awn6jyhcfhyfvpjvfziprmq85cigf19mwbvaprhblydsag3c"))
(file-name (string-append "trivial-features-" version ".tar.gz"))))
(base32 "0ccv7dqyrk55xga78i5vzlic7mdwp28in3g1a8fqhlk6626scsq9"))))
(build-system asdf-build-system/sbcl)
(arguments '(#:tests? #f))
(home-page "http://cliki.net/trivial-features")
@ -1691,13 +1700,13 @@ with a focus on interactive development.")
(version "0.5.0")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/cl-babel/babel/archive/v"
version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/cl-babel/babel.git")
(commit (string-append "v" version))))
(file-name (git-file-name "babel" version))
(sha256
(base32 "189kgbmslh36xx0d2i1g6a7mcvjryvjzkdlnhilqy5xs7hkyqirq"))
(file-name (string-append name "-" version ".tar.gz"))))
(base32 "139a8rn2gnhj082n8jg01gc8fyr63hkj57hgrnmb3d1r327yc77f"))))
(build-system asdf-build-system/sbcl)
(native-inputs
`(("tests:cl-hu.dwim.stefil" ,sbcl-hu.dwim.stefil)))
@ -2971,12 +2980,13 @@ non-consing thread safe queues and fibonacci priority queues.")
(version "0.19.0")
(source
(origin
(method url-fetch)
(uri (string-append "https://github.com/cffi/cffi/archive/v"
version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/cffi/cffi.git")
(commit (string-append "v" version))))
(file-name (git-file-name "cffi-bootstrap" version))
(sha256
(base32 "07bc3c1fbfx17wgrvx6bh9byilfzfwv5n597cfdllm0vzwvbmiyk"))
(file-name (string-append name "-" version ".tar.gz"))))
(base32 "09sfgc6r7ihmbkwfpvkq5fxc7h45cabpvgbvs47i5cvnmv3k72xy"))))
(build-system asdf-build-system/sbcl)
(inputs
`(("libffi" ,libffi)
@ -3235,13 +3245,13 @@ precisely control behavior of the parser via Common Lisp restarts.")
(version "0.21")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/trivial-garbage/trivial-garbage/archive/v"
version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/trivial-garbage/trivial-garbage.git")
(commit (string-append "v" version))))
(file-name (git-file-name "trivial-garbage" version))
(sha256
(base32 "0b244nlszkrqawsnp568clnx32xmvjmbbagbz7625w9n0yq7396y"))
(file-name (string-append "trivial-garbage-" version ".tar.gz"))))
(base32 "0122jicfg7pca1wxw8zak1n92h5friqy60988ns0ysksj3fphw9n"))))
(build-system asdf-build-system/sbcl)
(native-inputs
`(("rt" ,sbcl-rt)))
@ -4169,12 +4179,13 @@ sockets, SSL, continuable uploads, file uploads, cookies, and more.")
(version "1.2.38")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/edicl/hunchentoot/archive/v"
version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/edicl/hunchentoot.git")
(commit (string-append "v" version))))
(file-name (git-file-name "hunchentoot" version))
(sha256
(base32 "17z8rpd6b5w93jwrdwfwxjha617xnjqw8aq1hw2z76zp1fn8yrmh"))))
(base32 "1anpcad7w045m4rsjs1f3xdhjwx5cppq1h0vlb3q7dz81fi3i6yq"))))
(build-system asdf-build-system/sbcl)
(native-inputs
`(("sbcl-cl-who" ,sbcl-cl-who)
@ -5238,3 +5249,36 @@ Python's WSGI and Ruby's Rack.")
(define-public cl-clack
(sbcl-package->cl-source-package sbcl-clack))
(define-public sbcl-log4cl
(let ((commit "611e094458504b938d49de904eab141285328c7c")
(revision "1"))
(package
(name "sbcl-log4cl")
(build-system asdf-build-system/sbcl)
(version "1.1.2")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/sharplispers/log4cl")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"08jly0s0g26b56hhpfizxsb4j0yvbh946sd205gr42dkzv8l7dsc"))))
;; FIXME: tests require stefil, sbcl-hu.dwim.stefil wont work
(arguments
`(#:tests? #f))
(inputs `(("bordeaux-threads" ,sbcl-bordeaux-threads)))
(synopsis "Common Lisp logging framework, modeled after Log4J")
(home-page "https://github.com/7max/log4cl")
(description "This is a Common Lisp logging framework that can log at
various levels and mix text with expressions.")
(license license:asl2.0))))
(define-public cl-log4cl
(sbcl-package->cl-source-package sbcl-log4cl))
(define-public ecl-log4cl
(sbcl-package->ecl-package sbcl-log4cl))

39
gnu/packages/llvm.scm
View File

@ -40,7 +40,9 @@
#:use-module (gnu packages bootstrap) ;glibc-dynamic-linker
#:use-module (gnu packages compression)
#:use-module (gnu packages libffi)
#:use-module (gnu packages mpi)
#:use-module (gnu packages perl)
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages python)
#:use-module (gnu packages xml))
@ -282,6 +284,43 @@ code analysis tools.")
use with Clang, targeting C++11, C++14 and above.")
(license license:expat)))
(define-public libomp
(package
(name "libomp")
(version (package-version llvm))
(source (origin
(method url-fetch)
(uri (string-append "http://releases.llvm.org/"
version "/openmp-" version
".src.tar.xz"))
(sha256
(base32
"030dkg5cypd7j9hq0mcqb5gs31lxwmzfq52j81l7v9ldcy5bf5mz"))
(file-name (string-append "libomp-" version ".tar.xz"))))
(build-system cmake-build-system)
;; XXX: Note this gets built with GCC because building with Clang itself
;; fails (missing <atomic>, even when libcxx is added as an input.)
(arguments
'(#:configure-flags '("-DLIBOMP_USE_HWLOC=ON"
"-DOPENMP_TEST_C_COMPILER=clang"
"-DOPENMP_TEST_CXX_COMPILER=clang++")
#:test-target "check-libomptarget"))
(native-inputs
`(("clang" ,clang)
("llvm" ,llvm)
("perl" ,perl)
("pkg-config" ,pkg-config)))
(inputs
`(("hwloc" ,hwloc "lib")))
(home-page "https://openmp.llvm.org")
(synopsis "OpenMP run-time support library")
(description
"This package provides the run-time support library developed by the LLVM
project for the OpenMP multi-theaded programming extension. This package
notably provides @file{libgomp.so}, which is has a binary interface compatible
with that of libgomp, the GNU Offloading and Multi Processing Library.")
(license license:expat)))
(define-public clang-runtime
(clang-runtime-from-llvm
llvm

491
gnu/packages/machine-learning.scm
View File

@ -49,6 +49,7 @@
#:use-module (gnu packages check)
#:use-module (gnu packages compression)
#:use-module (gnu packages cran)
#:use-module (gnu packages databases)
#:use-module (gnu packages dejagnu)
#:use-module (gnu packages gcc)
#:use-module (gnu packages glib)
@ -65,7 +66,9 @@
#:use-module (gnu packages python)
#:use-module (gnu packages python-web)
#:use-module (gnu packages python-xyz)
#:use-module (gnu packages serialization)
#:use-module (gnu packages statistics)
#:use-module (gnu packages sqlite)
#:use-module (gnu packages swig)
#:use-module (gnu packages tls)
#:use-module (gnu packages web)
@ -305,28 +308,46 @@ networks) based on simulation of (stochastic) flow in graphs.")
(version "12-068oasis4")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/fhcrc/mcl/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/fhcrc/mcl.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"1l5jbhwjpsj38x8b9698hfpkv75h8hn3kj0gihjhn8ym2cwwv110"))))
"0009dc3h2jp3qg5val452wngpqnbfyhbcxylghq0mrjqxx0jdq5p"))))
(build-system ocaml-build-system)
(arguments
`(#:ocaml ,ocaml-4.02
#:findlib ,ocaml4.02-findlib
#:phases
`(#:phases
(modify-phases %standard-phases
(add-before 'configure 'patch-paths
(lambda _
(substitute* "configure"
(("SHELL = /bin/sh") (string-append "SHELL = "(which "sh"))))
(("/bin/sh") (which "sh")))
(substitute* "setup.ml"
(("LDFLAGS=-fPIC")
(string-append "LDFLAGS=-fPIC\"; \"SHELL=" (which "sh"))))
(string-append "LDFLAGS=-fPIC\"; \"SHELL=" (which "sh")))
(("-std=c89") "-std=gnu99")
;; This is a mutable string, which is no longer supported. Use
;; a byte buffer instead.
(("String.make \\(String.length s\\)")
"Bytes.make (String.length s)")
;; These two belong together.
(("OASISString.replace_chars")
"Bytes.to_string (OASISString.replace_chars")
((" s;")
" s);"))
(substitute* "myocamlbuild.ml"
(("std=c89") "std=gnu99"))
;; Since we build with a more recent OCaml, we have to use C99 or
;; later. This causes problems with the old C code.
(substitute* "src/impala/matrix.c"
(("restrict") "restrict_"))
#t)))))
(native-inputs
`(("ocamlbuild" ,ocamlbuild)))
(home-page "https://github.com/fhcrc/mcl")
(synopsis "OCaml wrappers around MCL")
(description
@ -1285,3 +1306,451 @@ for load balancing, tracing, health checking and authentication. It is also
applicable in last mile of distributed computing to connect devices, mobile
applications and browsers to backend services.")
(license license:asl2.0)))
;; Note that Tensorflow includes a "third_party" directory, which seems to not
;; only contain modified subsets of upstream library source code, but also
;; adapter headers provided by Google (such as the fft.h header, which is not
;; part of the upstream project code). The Tensorflow code includes headers
;; from the "third_party" directory. It does not look like we can replace
;; these headers with unmodified upstream files, so we keep them.
(define-public tensorflow
(package
(name "tensorflow")
(version "1.9.0")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/tensorflow/tensorflow.git")
(commit (string-append "v" version))))
(file-name (string-append "tensorflow-" version "-checkout"))
(sha256
(base32
"0a9kwha395g3wgxfwln5j8vn9nkspmd75xldrlqdq540w996g8xa"))))
(build-system cmake-build-system)
(arguments
`(#:tests? #f ; no "check" target
#:build-type "Release"
#:configure-flags
(let ((protobuf (assoc-ref %build-inputs "protobuf"))
(protobuf:native (assoc-ref %build-inputs "protobuf:native"))
(jsoncpp (assoc-ref %build-inputs "jsoncpp"))
(snappy (assoc-ref %build-inputs "snappy"))
(sqlite (assoc-ref %build-inputs "sqlite")))
(list
;; Use protobuf from Guix
(string-append "-Dprotobuf_STATIC_LIBRARIES="
protobuf "/lib/libprotobuf.so")
(string-append "-DPROTOBUF_PROTOC_EXECUTABLE="
protobuf:native "/bin/protoc")
;; Use snappy from Guix
(string-append "-Dsnappy_STATIC_LIBRARIES="
snappy "/lib/libsnappy.so")
;; Yes, this is not actually the include directory but a prefix...
(string-append "-Dsnappy_INCLUDE_DIR=" snappy)
;; Use jsoncpp from Guix
(string-append "-Djsoncpp_STATIC_LIBRARIES="
jsoncpp "/lib/libjsoncpp.so")
;; Yes, this is not actually the include directory but a prefix...
(string-append "-Djsoncpp_INCLUDE_DIR=" jsoncpp)
;; Use sqlite from Guix
(string-append "-Dsqlite_STATIC_LIBRARIES="
sqlite "/lib/libsqlite.a")
;; Use system libraries wherever possible. Currently, this
;; only affects zlib.
"-Dsystemlib_ALL=ON"
"-Dtensorflow_ENABLE_POSITION_INDEPENDENT_CODE=ON"
"-Dtensorflow_BUILD_SHARED_LIB=ON"
"-Dtensorflow_OPTIMIZE_FOR_NATIVE_ARCH=OFF"
"-Dtensorflow_ENABLE_SSL_SUPPORT=OFF"
"-Dtensorflow_BUILD_CONTRIB_KERNELS=OFF"))
#:make-flags
(list "CC=gcc")
#:modules ((ice-9 ftw)
(guix build utils)
(guix build cmake-build-system))
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'set-source-file-times-to-1980
;; At the end of the tf_python_build_pip_package target, a ZIP
;; archive should be generated via bdist_wheel, but it fails with
;; "ZIP does not support timestamps before 1980". Luckily,
;; SOURCE_DATE_EPOCH is respected, which we set to some time in
;; 1980.
(lambda _ (setenv "SOURCE_DATE_EPOCH" "315532800") #t))
;; See https://github.com/tensorflow/tensorflow/issues/20517#issuecomment-406373913
(add-after 'unpack 'python3.7-compatibility
(lambda _
(substitute* '("tensorflow/python/eager/pywrap_tfe_src.cc"
"tensorflow/python/lib/core/ndarray_tensor.cc"
"tensorflow/python/lib/core/py_func.cc")
(("PyUnicode_AsUTF8") "(char *)PyUnicode_AsUTF8"))
(substitute* "tensorflow/c/eager/c_api.h"
(("unsigned char async")
"unsigned char is_async"))
;; Remove dependency on tensorboard, a complicated but probably
;; optional package.
(substitute* "tensorflow/tools/pip_package/setup.py"
((".*'tensorboard >.*") ""))
#t))
(add-after 'python3.7-compatibility 'chdir
(lambda _ (chdir "tensorflow/contrib/cmake") #t))
(add-after 'chdir 'disable-downloads
(lambda* (#:key inputs #:allow-other-keys)
(substitute* (find-files "external" "\\.cmake$")
(("GIT_REPOSITORY.*") "")
(("GIT_TAG.*") "")
(("PREFIX ")
"DOWNLOAD_COMMAND \"\"\nPREFIX "))
;; Use packages from Guix
(let ((grpc (assoc-ref inputs "grpc")))
(substitute* "CMakeLists.txt"
;; Sqlite
(("include\\(sqlite\\)") "")
(("\\$\\{sqlite_STATIC_LIBRARIES\\}")
(string-append (assoc-ref inputs "sqlite")
"/lib/libsqlite3.so"))
(("sqlite_copy_headers_to_destination") "")
;; PNG
(("include\\(png\\)") "")
(("\\$\\{png_STATIC_LIBRARIES\\}")
(string-append (assoc-ref inputs "libpng")
"/lib/libpng16.so"))
(("png_copy_headers_to_destination") "")
;; JPEG
(("include\\(jpeg\\)") "")
(("\\$\\{jpeg_STATIC_LIBRARIES\\}")
(string-append (assoc-ref inputs "libjpeg")
"/lib/libjpeg.so"))
(("jpeg_copy_headers_to_destination") "")
;; GIF
(("include\\(gif\\)") "")
(("\\$\\{gif_STATIC_LIBRARIES\\}")
(string-append (assoc-ref inputs "giflib")
"/lib/libgif.so"))
(("gif_copy_headers_to_destination") "")
;; lmdb
(("include\\(lmdb\\)") "")
(("\\$\\{lmdb_STATIC_LIBRARIES\\}")
(string-append (assoc-ref inputs "lmdb")
"/lib/liblmdb.so"))
(("lmdb_copy_headers_to_destination") "")
;; Protobuf
(("include\\(protobuf\\)") "")
(("protobuf_copy_headers_to_destination") "")
(("^ +protobuf") "")
;; gRPC
(("include\\(grpc\\)")
"find_package(grpc REQUIRED NAMES gRPC)")
(("list\\(APPEND tensorflow_EXTERNAL_DEPENDENCIES grpc\\)") "")
;; Eigen
(("include\\(eigen\\)")
(string-append "find_package(eigen REQUIRED NAMES Eigen3)
set(eigen_INCLUDE_DIRS ${CMAKE_CURRENT_BINARY_DIR}/external/eigen_archive "
(assoc-ref inputs "eigen") "/include/eigen3)"))
(("^ +eigen") "")
;; snappy
(("include\\(snappy\\)")
"add_definitions(-DTF_USE_SNAPPY)")
(("list\\(APPEND tensorflow_EXTERNAL_DEPENDENCIES snappy\\)") "")
;; jsoncpp
(("include\\(jsoncpp\\)") "")
(("^ +jsoncpp") ""))
(substitute* "tf_core_framework.cmake"
((" grpc") "")
(("\\$\\{GRPC_BUILD\\}/grpc_cpp_plugin")
(which "grpc_cpp_plugin"))
;; Link with gRPC libraries
(("add_library\\(tf_protos_cc.*" m)
(string-append m
(format #f "\ntarget_link_libraries(tf_protos_cc PRIVATE \
~a/lib/libgrpc++_unsecure.a \
~a/lib/libgrpc_unsecure.a \
~a/lib/libaddress_sorting.a \
~a/lib/libgpr.a \
~a//lib/libcares.so
)\n"
grpc grpc grpc grpc
(assoc-ref inputs "c-ares"))))))
(substitute* "tf_tools.cmake"
(("add_dependencies\\(\\$\\{proto_text.*") ""))
;; Remove dependency on bundled grpc
(substitute* "tf_core_distributed_runtime.cmake"
(("tf_core_cpu grpc") "tf_core_cpu"))
;; This directory is a dependency of many targets.
(mkdir-p "protobuf")
#t))
(add-after 'configure 'unpack-third-party-sources
(lambda* (#:key inputs #:allow-other-keys)
;; This is needed to configure bundled packages properly.
(setenv "CONFIG_SHELL" (which "bash"))
(for-each
(lambda (name)
(let* ((what (assoc-ref inputs (string-append name "-src")))
(name* (string-map (lambda (c)
(if (char=? c #\-)
#\_ c)) name))
(where (string-append "../build/" name* "/src/" name*)))
(cond
((string-suffix? ".zip" what)
(mkdir-p where)
(with-directory-excursion where
(invoke "unzip" what)))
((string-suffix? ".tar.gz" what)
(mkdir-p where)
(invoke "tar" "xf" what
"-C" where "--strip-components=1"))
(else
(let ((parent (dirname where)))
(mkdir-p parent)
(with-directory-excursion parent
(when (file-exists? name*)
(delete-file-recursively name*))
(copy-recursively what name*)
(map make-file-writable
(find-files name* ".*"))))))))
(list "boringssl"
"cub"
"double-conversion"
"farmhash"
"fft2d"
"highwayhash"
"nsync"
"re2"))
(rename-file "../build/cub/src/cub/cub-1.8.0/"
"../build/cub/src/cub/cub/")
#t))
(add-after 'unpack 'fix-python-build
(lambda* (#:key inputs outputs #:allow-other-keys)
(mkdir-p "protobuf-src")
(invoke "tar" "xf" (assoc-ref inputs "protobuf:src")
"-C" "protobuf-src" "--strip-components=1")
(mkdir-p "eigen-src")
(invoke "tar" "xf" (assoc-ref inputs "eigen:src")
"-C" "eigen-src" "--strip-components=1")
(substitute* "tensorflow/contrib/cmake/tf_python.cmake"
;; Ensure that all Python dependencies can be found at build time.
(("PYTHONPATH=\\$\\{CMAKE_CURRENT_BINARY_DIR\\}/tf_python" m)
(string-append m ":" (getenv "PYTHONPATH")))
;; Take protobuf source files from our source package.
(("\\$\\{CMAKE_CURRENT_BINARY_DIR\\}/protobuf/src/protobuf/src/google")
(string-append (getcwd) "/protobuf-src/src/google")))
(substitute* '("tensorflow/contrib/cmake/tf_shared_lib.cmake"
"tensorflow/contrib/cmake/tf_python.cmake")
;; Take Eigen source files from our source package.
(("\\$\\{CMAKE_CURRENT_BINARY_DIR\\}/eigen/src/eigen/")
(string-append (getcwd) "/eigen-src/"))
;; Take Eigen headers from our own package.
(("\\$\\{CMAKE_CURRENT_BINARY_DIR\\}/external/eigen_archive")
(string-append (assoc-ref inputs "eigen") "/include/eigen3")))
;; Correct the RUNPATH of ops libraries generated for Python.
;; TODO: this doesn't work :(
;; /gnu/store/...-tensorflow-1.9.0/lib/python3.7/site-packages/tensorflow/contrib/seq2seq/python/ops/lib_beam_search_ops.so:
;; warning: RUNPATH contains bogus entries: ("/tmp/guix-build-tensorflow-1.9.0.drv-0/source/tensorflow/contrib/build")
;; /gnu/store/...-tensorflow-1.9.0/lib/python3.7/site-packages/tensorflow/contrib/seq2seq/python/ops/lib_beam_search_ops.so:
;; error: depends on 'libpywrap_tensorflow_internal.so', which
;; cannot be found in RUNPATH ...
(substitute* "tensorflow/contrib/cmake/tf_cc_ops.cmake"
(("set_target_properties.*")
(string-append "set_target_properties(${_AT_TARGET} PROPERTIES \
COMPILE_FLAGS ${target_compile_flags} \
INSTALL_RPATH_USE_LINK_PATH TRUE \
INSTALL_RPATH " (assoc-ref outputs "out") "/lib)\n")))
#t))
(add-after 'build 'build-pip-package
(lambda* (#:key outputs #:allow-other-keys)
(setenv "LDFLAGS"
(string-append "-Wl,-rpath="
(assoc-ref outputs "out") "/lib"))
(invoke "make" "tf_python_build_pip_package")
#t))
(add-after 'build-pip-package 'install-python
(lambda* (#:key outputs #:allow-other-keys)
(let ((out (assoc-ref outputs "out"))
(wheel (car (find-files "../build/tf_python/dist/" "\\.whl$"))))
(invoke "python" "-m" "pip" "install" wheel
(string-append "--prefix=" out))
;; XXX: broken RUNPATH, see fix-python-build phase.
(delete-file
(string-append
out "/lib/python3.7/site-packages/tensorflow/contrib/"
"seq2seq/python/ops/lib_beam_search_ops.so"))
#t))))))
(native-inputs
`(("pkg-config" ,pkg-config)
("protobuf:native" ,protobuf-next) ; protoc
("protobuf:src" ,(package-source protobuf-next))
("eigen:src" ,(package-source eigen-for-tensorflow))
;; The commit hashes and URLs for third-party source code are taken
;; from "tensorflow/workspace.bzl".
("boringssl-src"
,(let ((commit "ee7aa02")
(revision "1"))
(origin
(method git-fetch)
(uri (git-reference
(url "https://boringssl.googlesource.com/boringssl")
(commit commit)))
(file-name (string-append "boringssl-0-" revision
(string-take commit 7)
"-checkout"))
(sha256
(base32
"1jf693q0nw0adsic6cgmbdx6g7wr4rj4vxa8j1hpn792fqhd8wgw")))))
("cub-src"
,(let ((version "1.8.0"))
(origin
(method url-fetch)
(uri (string-append "https://mirror.bazel.build/github.com/NVlabs/"
"cub/archive/" version ".zip"))
(file-name (string-append "cub-" version ".zip"))
(sha256
(base32
"1hsqikqridb90dkxkjr2918dcry6pfh46ccnwrzawl56aamhdykb")))))
("double-conversion-src"
,(let ((commit "5664746")
(revision "1"))
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/google/double-conversion.git")
(commit commit)))
(file-name
(git-file-name "double-conversion"
(string-append "0-" revision "."
(string-take commit 7))))
(sha256
(base32
"1h5lppqqxcvdg5jq42i5msgwx20ryij3apvmndflngrgdpc04gn1")))))
("farmhash-src"
,(let ((commit "816a4ae622e964763ca0862d9dbd19324a1eaf45"))
(origin
(method url-fetch)
(uri (string-append
"https://mirror.bazel.build/github.com/google/farmhash/archive/"
commit ".tar.gz"))
(file-name (string-append "farmhash-0-" (string-take commit 7)
".tar.gz"))
(sha256
(base32
"185b2xdxl4d4cnsnv6abg8s22gxvx8673jq2yaq85bz4cdy58q35")))))
;; The license notice on the home page at
;; http://www.kurims.kyoto-u.ac.jp/~ooura/fft.html says:
;; Copyright Takuya OOURA, 1996-2001
;;
;; You may use, copy, modify and distribute this code for any purpose
;; (include commercial use) and without fee. Please refer to this
;; package when you modify this code.
;;
;; We take the identical tarball from the Bazel mirror, because the URL
;; at the home page is not versioned and might change.
("fft2d-src"
,(origin
(method url-fetch)
(uri "https://mirror.bazel.build/www.kurims.kyoto-u.ac.jp/~ooura/fft.tgz")
(file-name "fft2d.tar.gz")
(sha256
(base32
"15jjkfvhqvl2c0753d2di8hz0pyzn598g74wqy79awdrf1y67fsj"))))
("highwayhash-src"
,(let ((commit "be5edafc2e1a455768e260ccd68ae7317b6690ee")
(revision "1"))
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/google/highwayhash.git")
(commit commit)))
(file-name (string-append "highwayhash-0-" revision
(string-take commit 7)
"-checkout"))
(sha256
(base32
"154jwf98cyy54hldr94pgjn85zynly3abpnc1avmb8a18lzwjyb6")))))
("nsync-src"
,(let ((version "0559ce013feac8db639ee1bf776aca0325d28777")
(revision "1"))
(origin
(method url-fetch)
(uri (string-append "https://mirror.bazel.build/"
"github.com/google/nsync/archive/"
version ".tar.gz"))
(file-name (string-append "nsync-0." revision
"-" (string-take version 7)
".tar.gz"))
(sha256
(base32
"0qdkyqym34x739mmzv97ah5r7ph462v5xkxqxvidmcfqbi64b132")))))
("re2-src"
,(let ((commit "e7efc48")
(revision "1"))
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/google/re2")
(commit commit)))
(file-name (string-append "re2-0-" revision
(string-take commit 7)
"-checkout"))
(sha256
(base32
"161g9841rjfsy5pn52fcis0s9hdr7rxvb06pad38j5rppfihvign")))))
("googletest" ,googletest)
("swig" ,swig)
("unzip" ,unzip)))
(propagated-inputs
`(("python-absl-py" ,python-absl-py)
("python-astor" ,python-astor)
("python-gast" ,python-gast)
("python-grpcio" ,python-grpcio)
("python-numpy" ,python-numpy)
("python-protobuf" ,python-protobuf-next)
("python-six" ,python-six)
("python-termcolo" ,python-termcolor)
("python-wheel" ,python-wheel)))
(inputs
`(("c-ares" ,c-ares-next)
("eigen" ,eigen-for-tensorflow)
("gemmlowp" ,gemmlowp-for-tensorflow)
("lmdb" ,lmdb)
("libjpeg" ,libjpeg)
("libpng" ,libpng)
("giflib" ,giflib)
("grpc" ,grpc)
("jsoncpp" ,jsoncpp-for-tensorflow)
("snappy" ,snappy)
("sqlite" ,sqlite)
("protobuf" ,protobuf-next)
("python" ,python-wrapper)
("zlib" ,zlib)))
(home-page "https://tensorflow.org")
(synopsis "Machine learning framework")
(description
"TensorFlow is a flexible platform for building and training machine
learning models. It provides a library for high performance numerical
computation and includes high level Python APIs, including both a sequential
API for beginners that allows users to build models quickly by plugging
together building blocks and a subclassing API with an imperative style for
advanced research.")
(license license:asl2.0)))

102
gnu/packages/mail.scm
View File

@ -95,6 +95,7 @@
#:use-module (gnu packages onc-rpc)
#:use-module (gnu packages pcre)
#:use-module (gnu packages perl)
#:use-module (gnu packages perl-web)
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages python)
#:use-module (gnu packages python-web)
@ -110,6 +111,7 @@
#:use-module (gnu packages texinfo)
#:use-module (gnu packages time)
#:use-module (gnu packages tls)
#:use-module (gnu packages version-control)
#:use-module (gnu packages w3m)
#:use-module (gnu packages web)
#:use-module (gnu packages webkit)
@ -1389,7 +1391,7 @@ How it works:
@item This password digest is used as a symmetric secret to decrypt a libsodium secretbox.
@item Inside the secretbox is stored a Curve25519 private key.
@item The Curve25519 private key is used to decrypt each individual message,
using lidsodium sealed boxes.
using libsodium sealed boxes.
@item New mail is encrypted as it arrives using the Curve25519 public key.
@end enumerate\n")
(license agpl3)))
@ -1504,6 +1506,28 @@ locates email addresses in strings and returns a list of Email::Address
objects found. Alternatively you may construct objects manually.")
(license perl-license)))
(define-public perl-email-address-xs
(package
(name "perl-email-address-xs")
(version "1.04")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://cpan/authors/id/P/PA/PALI/"
"Email-Address-XS-" version ".tar.gz"))
(sha256
(base32
"0gjrrl81z3sfwavgx5kwjd87gj44mlnbbqsm3dgdv1xllw26spwr"))))
(build-system perl-build-system)
(home-page "https://metacpan.org/release/Email-Address-XS")
(synopsis "Parse and format RFC 5322 email addresses and groups")
(description
"Email::Address::XS implements RFC 5322 parser and formatter of email
addresses and groups. Unlike Email::Address, this module does not use regular
expressions for parsing but instead is implemented in XS and uses shared code
from Dovecot IMAP server.")
(license perl-license)))
(define-public perl-email-date-format
(package
(name "perl-email-date-format")
@ -2866,3 +2890,79 @@ replacement for the @code{urlview} program.")
(description "This package provides a TNEF stream reader library and
related tools to process winmail.dat files.")
(license gpl2+)))
(define-public public-inbox
(let ((commit "3cf66514aea9e958999973b9f104473b6d800fbe")
(revision "0"))
(package
(name "public-inbox")
(version (git-version "1.0.0" revision commit))
(source
(origin (method git-fetch)
(uri (git-reference
(url "https://public-inbox.org")
(commit commit)))
(sha256
(base32
"1sxycwlm2n6p544gn9f0vf3xs6gz8vdswdhs2ha6fka8mgabvmdh"))
(file-name (git-file-name name version))))
(build-system perl-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(add-before 'configure 'qualify-paths
(lambda _
;; Use absolute paths for 'xapian-compact'.
(let ((xapian-compact (which "xapian-compact")))
(substitute* "script/public-inbox-compact"
(("xapian-compact") xapian-compact)))
#t))
(add-before 'check 'pre-check
(lambda _
(substitute* "t/spawn.t"
(("\\['env'\\]") (string-append "['" (which "env") "']")))
#t))
(add-after 'install 'wrap-programs
(lambda* (#:key inputs outputs #:allow-other-keys)
(let ((out (assoc-ref outputs "out")))
(for-each
(lambda (prog)
(wrap-program prog
;; Let those scripts find their perl modules.
`("PERL5LIB" ":" prefix
(,(string-append out "/lib/perl5/site_perl")
,(getenv "PERL5LIB")))
;; 'git' is invoked in various files of the PublicInbox
;; perl module.
`("PATH" ":" prefix
(,(string-append (assoc-ref inputs "git") "/bin")))))
(find-files (string-append out "/bin"))))
#t)))))
(native-inputs
`(("git" ,git)
("xapian" ,xapian)))
(inputs
`(("perl-danga-socket" ,perl-danga-socket)
("perl-dbd-sqlite" ,perl-dbd-sqlite)
("perl-dbi" ,perl-dbi)
("perl-email-address-xs" ,perl-email-address-xs)
("perl-email-mime-contenttype" ,perl-email-mime-contenttype)
("perl-email-mime" ,perl-email-mime)
("perl-email-simple" ,perl-email-simple)
("perl-filesys-notify-simple" ,perl-filesys-notify-simple)
("perl-plack-middleware-deflater" ,perl-plack-middleware-deflater)
("perl-plack-middleware-reverseproxy" ,perl-plack-middleware-reverseproxy)
("perl-plack" ,perl-plack)
("perl-search-xapian" ,perl-search-xapian)
("perl-timedate" ,perl-timedate)
("perl-uri-escape" ,perl-uri-escape)
;; For testing.
("perl-ipc-run" ,perl-ipc-run)
("perl-xml-feed" ,perl-xml-feed)))
(home-page "https://public-inbox.org/README.html")
(synopsis "Archive mailing lists in git repositories")
(description
"public-inbox implements the sharing of an email inbox via git to
complement or replace traditional mailing lists. Readers may read via NNTP,
Atom feeds or HTML archives.")
(license agpl3+))))

42
gnu/packages/mate.scm
View File

@ -4,6 +4,7 @@
;;; Copyright © 2017 ng0 <ng0@n0.is>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2019 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2019 Guy Fleury Iteriteka <hoonandon@gmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
@ -92,6 +93,46 @@
MATE applications.")
(license license:gpl3+)))
(define-public mate-power-manager
(package
(name "mate-power-manager")
(version "1.22.0")
(source
(origin
(method url-fetch)
(uri (string-append "https://pub.mate-desktop.org/releases/"
(version-major+minor version) "/"
name "-" version ".tar.xz"))
(sha256
(base32
"03c09h41qfz83wmjfvwzkq4xqc54aswmki4h034qcxbgfnyfmk1i"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)
("intltool" ,intltool)
("yelp-tools" ,yelp-tools)
("glib" ,glib "bin") ; glib-gettextize
("libtool" ,libtool)))
(inputs
`(("gtk+" ,gtk+)
("glib" ,glib)
("dbus-glib" ,dbus-glib)
("libgnome-keyring" ,libgnome-keyring)
("cairo" ,cairo)
("dbus" ,dbus)
("libnotify" ,libnotify)
("mate-panel" ,mate-panel)
("libxrandr" ,libxrandr)
("libcanberra" ,libcanberra)
("upower" ,upower)))
(home-page "https://mate-desktop.org/")
(synopsis "A Power Manager for MATE")
(description
"MATE Power Manager is a MATE session daemon that acts as a policy agent on
top of UPower. It listens to system events and responds with user-configurable
actions.")
(license license:gpl3+)))
(define-public mate-icon-theme
(package
(name "mate-icon-theme")
@ -1565,6 +1606,7 @@ used to bring up authentication dialogs.")
("mate-terminal" ,mate-terminal)
("mate-themes" ,mate-themes)
("mate-icon-theme" ,mate-icon-theme)
("mate-power-manager" ,mate-power-manager)
("mate-menu" ,mate-menus)
("mate-panel" ,mate-panel)
("mate-control-center" ,mate-control-center)

110
gnu/packages/maths.scm
View File

@ -650,13 +650,13 @@ plotting engine by third-party applications like Octave.")
(version "2.0.0")
(source
(origin
(method url-fetch)
(uri (string-append "https://github.com/OkoSanto/GCTP/archive/v"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/OkoSanto/GCTP.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0l9aqnqynh9laicn5dxf3rsb1n14xiks79wbyqccirzmjqd1c1x4"))))
(base32 "11wqmd443b4nksdbzp1msdws3av948nmwq1xz80w6hka3ss2aigd"))))
(native-inputs
`(("fortran" ,gfortran)))
(build-system gnu-build-system)
@ -1555,15 +1555,14 @@ script files.")
(version "0.17.2")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/tpaviot/oce/archive/OCE-"
version
".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/tpaviot/oce.git")
(commit (string-append "OCE-" version))))
(file-name (git-file-name name version))
(patches (search-patches "opencascade-oce-glibc-2.26.patch"))
(sha256
(base32
"0vpmnb0k5y2f7lpmwx9pg9yfq24zjvnsak5alzacncfm1hv9b6cd"))))
(base32 "0rg5wzkvfmzfl6v2amyryb8dnjad0nn9kyr607wy2gch6rciah69"))))
(build-system cmake-build-system)
(arguments
'(#:configure-flags
@ -2228,12 +2227,12 @@ programming problems.")
(define-public r-pracma
(package
(name "r-pracma")
(version "2.2.2")
(version "2.2.5")
(source (origin
(method url-fetch)
(uri (cran-uri "pracma" version))
(sha256
(base32 "18zhni05gwnxbphl6bmjjxmsgg5wwnnkwlb4g971cqyw3dsd83ki"))))
(base32 "0isd3s0i4mzmva8lkh0j76hwjy1w50q7d1n9lhxsnnkgalx3xs1g"))))
(build-system r-build-system)
(home-page "https://cran.r-project.org/web/packages/pracma/")
(synopsis "Practical numerical math functions")
@ -2952,13 +2951,13 @@ associated functions (eg. contiguous and non-contiguous submatrix views).")
(version (string-append upstream-version "-" revision))
(source
(origin
(method url-fetch)
(uri (string-append "https://github.com/beltoforion/muparser/archive/v"
upstream-version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/beltoforion/muparser.git")
(commit (string-append "v" upstream-version))))
(file-name (git-file-name name version))
(sha256
(base32
"0277qsi5l23jsck1vhn383bmvc2n9l4a1dl5r9bf7hvjv9ayyrh6"))))
(base32 "0f0g4995xngf1pp3zr4p6ai2f8v6f8bxwa0k8ayjjiv1l8h44m24"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags '("--enable-samples=no")
@ -3146,13 +3145,13 @@ access to BLIS implementations via traditional BLAS routine calls.")
(version "0.6.0")
(source
(origin
(method url-fetch)
(uri (string-append "https://github.com/JuliaLang/openlibm/archive/v"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/JuliaLang/openlibm.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0a5fpm8nra5ldhjk0cqd2rx1qh32wiarkxmcqcm5xl8z7l4kjm6l"))))
(base32 "08wfchmmr5200fvmn1kwq9byc1fhsq46hn0y5k8scdl74771c7gh"))))
(build-system gnu-build-system)
(arguments
`(#:make-flags
@ -3185,13 +3184,13 @@ environments.")
(version "0.5.3")
(source
(origin
(method url-fetch)
(uri (string-append "https://github.com/JuliaLang/openspecfun/archive/v"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/JuliaLang/openspecfun.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1rs1bv8jq751fv9vq79890wqf9xlbjc7lvz3ighzyfczbyjcf18m"))))
(base32 "0pfw6l3ch7isz403llx7inxlvavqh01jh1hb9dpidi86sjjx9kfh"))))
(build-system gnu-build-system)
(arguments
'(#:tests? #f ; no "check" target
@ -3682,31 +3681,32 @@ set.")
(define-public hypre
(package
(name "hypre")
(version "2.14.0")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/LLNL/hypre/archive/"
"v" version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"0v515i73bvaz378h5465b1dy9v2gf924zy2q94cpq4qqarawvkqh"))
(modules '((guix build utils)))
(snippet
'(begin
;; Remove use of __DATE__ and __TIME__ for reproducibility;
;; substitute the tarball creation time.
(substitute* "src/utilities/HYPRE_utilities.h"
(("Date Compiled: .*$")
"Date Compiled: Apr 11 2018 16:24:59 +0000\"\n"))
#t))))
(version "2.15.1")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/LLNL/hypre.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1lvh4ybqkriyqfg2zmic6mrg1981qv1i9vry1fdgsabn81hb71g4"))
(modules '((guix build utils)))
(snippet
'(begin
;; Remove use of __DATE__ and __TIME__ for reproducibility;
;; substitute the release date.
(substitute* "src/utilities/HYPRE_utilities.h"
(("Date Compiled: .*$")
"Date Compiled: Oct 19 2018 15:23:00 +0000\"\n"))
#t))))
(build-system gnu-build-system)
(outputs '("out" ;6.1 MiB of headers and libraries
"doc")) ;4.8 MiB of documentation
(outputs '("out" ; 6.1 MiB of headers and libraries
"doc")) ; 4.8 MiB of documentation
(native-inputs
`(("doc++" ,doc++)
("netpbm" ,netpbm)
("perl" ,perl) ;needed to run 'ppmquant' during tests
("perl" ,perl) ; needed to run 'ppmquant' during tests
("texlive" ,(texlive-union (list texlive-generic-xypic
texlive-fonts-xypic
texlive-latex-hyperref
@ -3770,7 +3770,7 @@ set.")
(with-directory-excursion "docs"
(for-each (lambda (base)
(install-file (string-append base ".pdf") docdir)
(copy-recursively base docdir)) ;html docs
(copy-recursively base docdir)) ; html docs
'("HYPRE_usr_manual"
"HYPRE_ref_manual")))
#t))))))

30
gnu/packages/messaging.scm
View File

@ -1693,18 +1693,19 @@ building the IRC clients and bots.")
(define-public toxic
(package
(name "toxic")
(version "0.8.2")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/JFreegman/toxic/archive/v"
version ".tar.gz"))
(sha256
(base32
"1dx6z7k0zpsd7dpysdy23f0hnm49qlikb0mq8fg0y01dsz9vxgak"))
(file-name (git-file-name name version))))
(version "0.8.3")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/JFreegman/toxic.git")
(commit (string-append "v" version))))
(sha256
(base32 "09l2j3lwvrq7bf3051vjsnml9w63790ly3iylgf26gkrmld6k31w"))
(file-name (git-file-name name version))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; no tests
`(#:tests? #f ; no tests
#:make-flags
(list
"CC=gcc"
@ -1721,7 +1722,7 @@ building the IRC clients and bots.")
`(("c-toxcore" ,c-toxcore)
("curl" ,curl)
("freealut" ,freealut)
("gdk-pixbuf" ,gdk-pixbuf) ; for libnotify.pc
("gdk-pixbuf" ,gdk-pixbuf) ; for libnotify.pc
("libconfig" ,libconfig)
("libnotify" ,libnotify)
("libpng" ,libpng)
@ -1819,13 +1820,13 @@ QMatrixClient project.")
(define-public hangups
(package
(name "hangups")
(version "0.4.6")
(version "0.4.9")
(source
(origin
(method url-fetch)
(uri (pypi-uri "hangups" version))
(sha256
(base32 "0mvpfd5dc3zgcvwfidcd2qyn59xl5biv728mxifw0ls5rzkc9chs"))))
(base32 "1jw4i58cd4j1ymsnhv9224xsi26w8y0qrj6z4nw50dnbl45b6aaa"))))
(build-system python-build-system)
(arguments
`(#:phases
@ -1847,6 +1848,9 @@ QMatrixClient project.")
("python-reparser" ,python-reparser)
("python-requests" ,python-requests)
("python-urwid" ,python-urwid)))
(native-inputs
`(("python-httpretty" ,python-httpretty)
("python-pytest" ,python-pytest)))
(home-page "https://hangups.readthedocs.io/")
(synopsis "Instant messaging client for Google Hangouts")
(description

6
gnu/packages/monitoring.scm
View File

@ -427,16 +427,16 @@ written in Go with pluggable metric collectors.")
(define-public fswatch
(package
(name "fswatch")
(version "1.13.0")
(version "1.14.0")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/emcrisostomo/fswatch.git")
(commit version)))
(file-name (string-append name "-" version "-checkout"))
(file-name (git-file-name name version))
(sha256
(base32
"0r9m3rysqa1kdgghv2i6sv4zrd0v8idsbrp627ys642dl39svir3"))))
"1ihn7wp3y7ml2lm8drz2hc6fmgj8kygbygnw8mz7gjax88f9dbx7"))))
(build-system gnu-build-system)
(native-inputs
`(("autoconf" ,autoconf)

18
gnu/packages/mp3.scm
View File

@ -5,7 +5,7 @@
;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2017 Thomas Danckaert <post@thomasdanckaert.be>
;;; Copyright © 2017 Pierre Langlois <pierre.langlois@gmx.com>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
;;;
;;; This file is part of GNU Guix.
;;;
@ -471,16 +471,16 @@ compression format (.mpc files).")
(define-public eyed3
(package
(name "eyed3")
(version "0.8.8")
(source (origin
(method url-fetch)
(uri (pypi-uri "eyeD3" version))
(sha256
(base32
"197lszkyzm377ym5r0ssryfsiz20yjx8y4rii3wc81n92d1qzlaq"))))
(version "0.8.10")
(source
(origin
(method url-fetch)
(uri (pypi-uri "eyeD3" version))
(sha256
(base32 "1jb22n1jczxgbpcnfiw12r8dcs74556g1d09mzms44f52kgs7lgc"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ; the required test data contains copyrighted material.
`(#:tests? #f)) ; the required test data contains copyrighted material
(propagated-inputs
`(("python-grako" ,python-grako)
("python-magic" ,python-magic)

6
gnu/packages/mpd.scm
View File

@ -5,7 +5,7 @@
;;; Copyright © 2014 Ian Denhardt <ian@zenhack.net>
;;; Copyright © 2015 Paul van der Walt <paul@denknerd.org>
;;; Copyright © 2016, 2018, 2019 Leo Famulari <leo@famulari.name>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
;;;
;;; This file is part of GNU Guix.
;;;
@ -195,7 +195,7 @@ player daemon.")
(define-public ncmpc
(package
(name "ncmpc")
(version "0.33")
(version "0.34")
(source (origin
(method url-fetch)
(uri
@ -204,7 +204,7 @@ player daemon.")
"/ncmpc-" version ".tar.xz"))
(sha256
(base32
"19fp7xkpai4lq3vmpbppgh3ism7lg2sibv237c0sl5a0hls4mq4l"))))
"0mz8r6vc4zn5sa3hlq4ii74qcrkh01nbg784zcwahgz8g3fb3i8l"))))
(build-system meson-build-system)
(arguments
`(#:configure-flags

5
gnu/packages/mpi.scm
View File

@ -161,7 +161,7 @@ bind processes, and much more.")
(define-public openmpi
(package
(name "openmpi")
(version "4.0.0")
(version "4.0.1")
(source
(origin
(method url-fetch)
@ -169,8 +169,7 @@ bind processes, and much more.")
(version-major+minor version)
"/downloads/openmpi-" version ".tar.bz2"))
(sha256
(base32
"0srnjwzsmyhka9hhnmqm86qck4w3xwjm8g6sbns58wzbrwv8l2rg"))))
(base32 "02cpzcp113gj5hb0j2xc0cqma2fn04i2i0bzf80r71120p9bdryc"))))
(build-system gnu-build-system)
(inputs
`(("hwloc" ,hwloc "lib")

4
gnu/packages/music.scm
View File

@ -2222,14 +2222,14 @@ computer's keyboard.")
(define-public aj-snapshot
(package
(name "aj-snapshot")
(version "0.9.8")
(version "0.9.9")
(source (origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/aj-snapshot/"
"aj-snapshot-" version ".tar.bz2"))
(sha256
(base32
"0wilky1g2mb88v2z0520s7sw1dsn10iwanc8id5p6z1xsnhg7b6p"))))
"0z8wd5yvxdmw1h1rj6km9h01xd4xmp4d86gczlix7hsc7zrf0wil"))))
(build-system gnu-build-system)
(inputs
`(("minixml" ,minixml)

4
gnu/packages/musl.scm
View File

@ -28,14 +28,14 @@
(define-public musl
(package
(name "musl")
(version "1.1.21")
(version "1.1.22")
(source (origin
(method url-fetch)
(uri (string-append "https://www.musl-libc.org/releases/"
"musl-" version ".tar.gz"))
(sha256
(base32
"0i2z52zgc86af1n1gjiz43hgd85mxjgvgn345zsybja9dxpvchn7"))))
"1qr9xqdzziy5bsyyqlh6k8yz056ll55d5yvc0gbhz61ginj422cb"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; musl has no tests

37
gnu/packages/networking.scm
View File

@ -161,7 +161,7 @@ residing in IPv4-only networks, even when they are behind a NAT device.")
(define-public socat
(package
(name "socat")
(version "1.7.3.2")
(version "1.7.3.3")
(source (origin
(method url-fetch)
(uri (string-append
@ -169,7 +169,7 @@ residing in IPv4-only networks, even when they are behind a NAT device.")
version ".tar.bz2"))
(sha256
(base32
"0lcj6zpra33xhgvhmz9l3cqz10v8ybafb8dd1yqkwf1rhy01ymp3"))))
"0jnhjijyq74g3wa4ph0am83z6vq7qna7ac0xqjma8s4197z3zmhd"))))
(build-system gnu-build-system)
(arguments '(#:tests? #f)) ;no 'check' phase
(inputs `(("openssl" ,openssl)))
@ -590,15 +590,14 @@ of the same name.")
(define-public wireshark
(package
(name "wireshark")
(version "3.0.0")
(version "3.0.1")
(source
(origin
(method url-fetch)
(uri (string-append "https://www.wireshark.org/download/src/wireshark-"
version ".tar.xz"))
(sha256
(base32
"17h0ixq7yr6scscjkidaj3dh5x6dfd3f97ggdxlklkz9nbsk0kxw"))))
(base32 "13605bpnnbqsdr8ybqnscbz9g422zmyymn4q5aci28vc1wylr1l6"))))
(build-system cmake-build-system)
(arguments
`(#:phases
@ -894,6 +893,30 @@ attacking, testing, and cracking. All tools are command-line driven, which
allows for heavy scripting.")
(license (list license:gpl2+ license:bsd-3))))
(define-public perl-danga-socket
(package
(name "perl-danga-socket")
(version "1.61")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://cpan/authors/id/B/BR/BRADFITZ/"
"Danga-Socket-" version ".tar.gz"))
(sha256
(base32
"0nciapvxnc922ms304af0vavz1kgyr45ard8wc659k9srqar4hwf"))))
(build-system perl-build-system)
(propagated-inputs
`(("perl-sys-syscall" ,perl-sys-syscall)))
(home-page "https://metacpan.org/release/Danga-Socket")
(synopsis "Event loop and event-driven async socket base class")
(description
"Danga::Socket is an abstract base class for objects backed by a socket
which provides the basic framework for event-driven asynchronous IO, designed
to be fast. Danga::Socket is both a base class for objects, and an event
loop.")
(license license:perl-license)))
(define-public perl-data-validate-ip
(package
(name "perl-data-validate-ip")
@ -924,7 +947,7 @@ private (reserved).")
(define-public perl-net-dns
(package
(name "perl-net-dns")
(version "1.19")
(version "1.20")
(source
(origin
(method url-fetch)
@ -935,7 +958,7 @@ private (reserved).")
(string-append "mirror://cpan/authors/id/N/NL/NLNETLABS/Net-DNS-"
version ".tar.gz")))
(sha256
(base32 "1myc23vz0m42yyg8iw7bf1pdrmx9ql6fhl2vwk1vwf55v6yphqi0"))))
(base32 "06z09igd42s0kg2ps5k7vpypg77zswfryqzbyalbllvjd0mnknbz"))))
(build-system perl-build-system)
(inputs
`(("perl-digest-hmac" ,perl-digest-hmac)))

663
gnu/packages/ocaml.scm
View File

@ -8,7 +8,7 @@
;;; Copyright © 2016, 2018 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016-2018 Julien Lepiller <julien@lepiller.eu>
;;; Copyright © 2017 Ben Woodcroft <donttrustben@gmail.com>
;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2017, 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018 Peter Kreye <kreyepr@gmail.com>
;;; Copyright © 2018, 2019 Gabriel Hondet <gabrielhondet@gmail.com>
;;; Copyright © 2018 Kei Kebreau <kkebreau@posteo.net>
@ -57,6 +57,7 @@
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages protobuf)
#:use-module (gnu packages python)
#:use-module (gnu packages python-xyz)
#:use-module (gnu packages sdl)
#:use-module (gnu packages sqlite)
#:use-module (gnu packages tex)
@ -264,14 +265,15 @@ functional, imperative and object-oriented styles of programming.")
(package
(name "ocamlbuild")
(version "0.13.1")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/ocaml/ocamlbuild/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"1320cfkixs1xlng5av04pa5qjb3ynvi2kl3k1ngqzg5fpi29b0vr"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/ocaml/ocamlbuild.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "0v37vjvdqw35yvj8ipmlzmwf1jhip0hbsmcbdcn9cnj12p3mr6k7"))))
(build-system gnu-build-system)
(arguments
`(#:test-target "test"
@ -302,33 +304,200 @@ functional, imperative and object-oriented styles of programming.")
for building OCaml library and programs.")
(license license:lgpl2.1+)))
(define-public ocaml-extlib
(package
(name "ocaml-extlib")
(version "1.7.6")
(source (origin
(method url-fetch)
(uri (string-append "https://ygrek.org.ua/p/release/ocaml-extlib/"
"extlib-" version ".tar.gz"))
(sha256
(base32
"0wfs20v1yj5apdbj7214wdsr17ayh0qqq7ihidndvc8nmmwfa1dz"))))
(build-system ocaml-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(delete 'configure))))
(native-inputs
`(("ocaml-cppo" ,ocaml-cppo)))
(home-page "https://github.com/ygrek/ocaml-extlib")
(synopsis "Complete and small extension for OCaml standard library")
(description "This library adds new functions to OCaml standard library
modules, modifies some functions in order to get better performances or
safety (tail-recursive) and also provides new modules which should be useful
for day to day programming.")
;; With static-linking exception
(license license:lgpl2.1+)))
(define-public ocaml-cudf
(package
(name "ocaml-cudf")
(version "0.9")
(source
(origin
(method url-fetch)
(uri "https://gforge.inria.fr/frs/download.php/36602/cudf-0.9.tar.gz")
(sha256
(base32
"0771lwljqwwn3cryl0plny5a5dyyrj4z6bw66ha5n8yfbpcy8clr"))))
(build-system ocaml-build-system)
(propagated-inputs `(("ocaml-extlib" ,ocaml-extlib)))
(native-inputs
`(("perl" ,perl)
("ocamlbuild" ,ocamlbuild)
("ocaml-ounit" ,ocaml-ounit)))
(arguments
`(#:make-flags
(list
"all" "opt"
(string-append "BINDIR=" (assoc-ref %outputs "out")
"/bin"))
#:phases
(modify-phases %standard-phases
(delete 'configure))))
(home-page "http://www.mancoosi.org/cudf/")
(synopsis "CUDF library (part of the Mancoosi tools)")
(description "CUDF (for Common Upgradeability Description Format) is a
format for describing upgrade scenarios in package-based Free and Open Source
Software distribution.")
;; With static-linking exception
(license license:lgpl2.1+)))
(define-public ocaml-mccs
(package
(name "ocaml-mccs")
(version "1.1+9")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/AltGr/ocaml-mccs")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"1i0hhkrqi7rqlainlg5pc4hibbx6b5dp3x99gmav8c3sbfvlk9mc"))))
(build-system dune-build-system)
(propagated-inputs `(("ocaml-cudf" ,ocaml-cudf)))
(home-page "http://www.i3s.unice.fr/~cpjm/misc/")
(synopsis "Upgrade path problem solver")
(description "Mccs (Multi Criteria CUDF Solver) is a CUDF problem solver.
Mccs take as input a CUDF problem and computes the best solution according to
a set of criteria. It relies on a Integer Programming solver or a
Pseudo Boolean solver to achieve its task. Mccs can use a wide set of
underlying solvers like Cplex, Gurobi, Lpsolver, Glpk, CbC, SCIP or WBO.")
(license (list
license:bsd-3
license:gpl3+
;; With static-linking exception
license:lgpl2.1+))))
(define-public ocaml-dose3
(package
(name "ocaml-dose3")
(version "5.0.1")
(source (origin
(method url-fetch)
(uri "https://gforge.inria.fr/frs/download.php/file/36063/dose3-5.0.1.tar.gz")
(sha256
(base32
"00yvyfm4j423zqndvgc1ycnmiffaa2l9ab40cyg23pf51qmzk2jm"))
(patches
(search-patches
"ocaml-dose3-Add-unix-as-dependency-to-dose3.common-in-META.in.patch"
"ocaml-dose3-Fix-for-ocaml-4.06.patch"
"ocaml-dose3-dont-make-printconf.patch"
"ocaml-dose3-Install-mli-cmx-etc.patch"))))
(build-system ocaml-build-system)
(arguments
`(#:configure-flags
(list (string-append "SHELL="
(assoc-ref %build-inputs "bash")
"/bin/sh"))
#:make-flags
(list (string-append "LIBDIR="
(assoc-ref %outputs "out")
"/lib/ocaml/site-lib"))))
(propagated-inputs
`(("ocaml-graph" ,ocaml-graph)
("ocaml-cudf" ,ocaml-cudf)
("ocaml-extlib" ,ocaml-extlib)
("ocaml-re" ,ocaml-re)))
(native-inputs
`(("perl" ,perl)
("python" ,python-2) ; for a test script
("python2-pyyaml" ,python2-pyyaml) ; for a test script
("ocaml-extlib" ,ocaml-extlib)
("ocamlbuild" ,ocamlbuild)
("ocaml-cppo" ,ocaml-cppo)))
(home-page "http://www.mancoosi.org/software/")
(synopsis "Package distribution management framework")
(description "Dose3 is a framework made of several OCaml libraries for
managing distribution packages and their dependencies. Though not tied to
any particular distribution, dose3 constitutes a pool of libraries which
enable analyzing packages coming from various distributions. Besides basic
functionalities for querying and setting package properties, dose3 also
implements algorithms for solving more complex problems such as monitoring
package evolutions, correct and complete dependency resolution and
repository-wide uninstallability checks.")
;; with static-linking exception
(license license:lgpl2.1+)))
(define-public ocaml-opam-file-format
(package
(name "ocaml-opam-file-format")
(version "2.0.0")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/ocaml/opam-file-format")
(commit version)))
(sha256
(base32
"0fqb99asnair0043hhc8r158d6krv5nzvymd0xwycr5y72yrp0hv"))))
(build-system ocaml-build-system)
(arguments
`(#:tests? #f; No tests
#:make-flags (list (string-append "LIBDIR=" (assoc-ref %outputs "out")
"/lib/ocaml/site-lib"))
#:phases
(modify-phases %standard-phases
(delete 'configure))))
(home-page "https://opam.ocaml.org")
(synopsis "Parser and printer for the opam file syntax")
(description "This package contains a parser and a pretty-printer for
the opam file fomat.")
;; With static-linking exception
(license license:lgpl2.1+)))
(define-public opam
(package
(name "opam")
(version "2.0.3")
(version "2.0.4")
(source (origin
(method url-fetch)
;; Use the '-full' version, which includes all the dependencies.
(uri (string-append
"https://github.com/ocaml/opam/releases/download/"
version "/opam-full-" version ".tar.gz")
;; (string-append "https://github.com/ocaml/opam/archive/"
;; version ".tar.gz")
)
(method git-fetch)
(uri (git-reference
(url "https://github.com/ocaml/opam")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"1qphm1grxx5j8li7f9qfpih4ylrnjl08b4ym8ma4ln44l56xm285"))))
(build-system gnu-build-system)
"1yx5k8v5vnnc20fmz5zx8kqd242j48qcknlk6vmkr7rkq886ipq2"))))
(build-system ocaml-build-system)
(arguments
'(;; Sometimes, 'make -jX' would fail right after ./configure with
;; "Fatal error: exception End_of_file".
#:parallel-build? #f
`(#:configure-flags
(list (string-append "SHELL="
(assoc-ref %build-inputs "bash")
"/bin/sh"))
;; For some reason, 'ocp-build' needs $TERM to be set.
#:make-flags `("TERM=screen"
,(string-append "SHELL="
(assoc-ref %build-inputs "bash")
"/bin/sh"))
#:make-flags
(list "TERM=screen"
(string-append "SHELL="
(assoc-ref %build-inputs "bash")
"/bin/sh"))
#:test-target "tests"
;; FIXME: There's an obscure test failure:
@ -354,12 +523,10 @@ for building OCaml library and programs.")
;; isolated environment when building with opam.
;; This is necessary for packages to find external
;; dependencies, such as a C compiler, make, etc...
(("^add_mounts ro /usr")
"add_mounts ro /gnu /run/current-system /usr"))
(("^add_sys_mounts /usr")
"add_sys_mounts /gnu /run/current-system /usr"))
(substitute* "src/client/opamInitDefaults.ml"
(("\"bwrap\"") (string-append "\"" bwrap "\"")))
;; Build dependencies
(apply invoke "make" "lib-ext" make-flags)
#t)))
(add-before 'check 'pre-check
(lambda _
@ -368,7 +535,9 @@ for building OCaml library and programs.")
(invoke "git" "config" "--global" "user.name" "Guix")
#t)))))
(native-inputs
`(("git" ,git) ;for the tests
`(("dune" ,dune)
("git" ,git) ;for the tests
("ocaml-cppo" ,ocaml-cppo)
("python" ,python) ;for the tests
("camlp4" ,camlp4)))
(inputs
@ -376,6 +545,12 @@ for building OCaml library and programs.")
("ncurses" ,ncurses)
("curl" ,curl)
("bubblewrap" ,bubblewrap)))
(propagated-inputs
`(("ocaml-cmdliner" ,ocaml-cmdliner)
("ocaml-dose3" ,ocaml-dose3)
("ocaml-mccs" ,ocaml-mccs)
("ocaml-opam-file-format" ,ocaml-opam-file-format)
("ocaml-re" ,ocaml-re)))
(home-page "http://opam.ocamlpro.com/")
(synopsis "Package manager for OCaml")
(description
@ -390,14 +565,15 @@ Git-friendly development workflow.")
(package
(name "camlp4")
(version "4.02+6")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/ocaml/camlp4/archive/"
version ".tar.gz"))
(sha256
(base32
"0icdfzhsbgf89925gc8gl3fm8z2xzszzlib0v9dj5wyzkyv3a342"))
(file-name (string-append name "-" version ".tar.gz"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/ocaml/camlp4.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "06yl4q0qazl7g25b0axd1gdkfd4qpqzs1gr5fkvmkrcbz113h1hj"))))
(build-system gnu-build-system)
(native-inputs `(("ocaml" ,ocaml-4.02)
("which" ,which)))
@ -447,14 +623,15 @@ syntax of OCaml.")
(inherit camlp4-4.02)
(name "camlp4")
(version "4.07+1")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/ocaml/camlp4/archive/"
version ".tar.gz"))
(sha256
(base32
"143hhxv1i6aq413z0i1pynrjcfl2g5gnh5r3863v6h9z0riqknzc"))
(file-name (string-append name "-" version ".tar.gz"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/ocaml/camlp4.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "0cxl4hkqcvspvkx4f2k83217rh6051fll9i2yz7cw6m3bq57mdvl"))))
(properties
`((ocaml4.02-variant . ,(delay camlp4-4.02))))
(native-inputs
@ -470,14 +647,15 @@ syntax of OCaml.")
(package
(name "camlp5")
(version "7.07")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/camlp5/camlp5/archive/rel"
(string-delete #\. version) ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"148r6p93xlxi6v7kbsqv8i70r6av04cyn0109pwss5xj6fw97i52"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/camlp5/camlp5.git")
(commit (string-append "rel" (string-delete #\. version)))))
(file-name (git-file-name name version))
(sha256
(base32 "1c8v45553ccbqha2ypfranqlgw06rr5wjr2hlnrx5bf9jfq0h0dn"))))
(build-system gnu-build-system)
(inputs
`(("ocaml" ,ocaml)))
@ -556,14 +734,15 @@ written in Objective Caml.")
(package
(name "ocaml-num")
(version "1.1")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/ocaml/num/archive/v"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"1xlkd0svc0mgq5s7nrm2rjrsvg15i9wxqkc1kvwjp6sv8vv8bb04"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/ocaml/num.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0a4mhxgs5hi81d227aygjx35696314swas0vzy3ig809jb7zq4h0"))))
(build-system ocaml-build-system)
(arguments
`(#:phases
@ -600,20 +779,25 @@ the OCaml core distribution.")
(package
(name "emacs-tuareg")
(version "2.2.0")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/ocaml/tuareg/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"1ynpfc170f9jqx49biji9npfkvfpflbm29xf24wc7fnxxayr49ig"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/ocaml/tuareg.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "06zxnn85fk5087iq0zxc5l5n9fz8r0367wylmynbfhc9711vccy6"))))
(build-system gnu-build-system)
(native-inputs `(("emacs" ,emacs-minimal)
("opam" ,opam)))
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'make-git-checkout-writable
(lambda _
(for-each make-file-writable (find-files "."))
#t))
(delete 'configure)
(add-before 'install 'fix-install-path
(lambda* (#:key outputs #:allow-other-keys)
@ -1094,14 +1278,15 @@ GNU CC attributes. It provides also a C pretty printer as an example of use.")
(package
(name "ocaml-qcheck")
(version "0.5.3.1")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/c-cube/qcheck/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"1zs1pg5cb1iry554v3cdmmiglsrwmsqa9x8zxmzb118fnk5d3ha6"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/c-cube/qcheck.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "0vl2asr7md99pv558nbszxvjj36b4l6rj05hyczfy524vihhl0gf"))))
(build-system ocaml-build-system)
(native-inputs
`(("ounit" ,ocaml-ounit)
@ -1185,17 +1370,18 @@ full_split, cut, rcut, etc..")
(package
(name "ocaml-bisect")
(version "1.3.1")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/gasche/bisect/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"0p67fppk5ifb63b00kxwrb1xg75hrqhknng3bsdyw3gxxqyjlpmx"))
(patches
(search-patches
"ocaml-bisect-fix-camlp4-in-another-directory.patch"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/gasche/bisect.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "0hm5za61qydda6ri3887b4zqqbqilh42x712xnclm1rr7ggga2nh"))
(patches
(search-patches
"ocaml-bisect-fix-camlp4-in-another-directory.patch"))))
(build-system ocaml-build-system)
(native-inputs
`(("camlp4" ,camlp4)
@ -1613,32 +1799,28 @@ spans without being subject to operating system calendar time adjustments.")
(define-public ocaml-cmdliner
(package
(name "ocaml-cmdliner")
(version "1.0.2")
(version "1.0.3")
(source (origin
(method url-fetch)
(uri (string-append "http://erratique.ch/software/cmdliner/releases/"
"cmdliner-" version ".tbz"))
(sha256
(base32
"18jqphjiifljlh9jg8zpl6310p3iwyaqphdkmf89acyaix0s4kj1"))))
"0g3w4hvc1cx9x2yp5aqn6m2rl8lf9x1dn754hfq8m1sc1102lxna"))))
(build-system ocaml-build-system)
(inputs
`(("ocaml-result" ,ocaml-result)))
(native-inputs
`(("ocamlbuild" ,ocamlbuild)
("opam" ,opam)))
`(("ocamlbuild" ,ocamlbuild)))
(arguments
`(#:tests? #f
#:build-flags '("native=true" "native-dynlink=true")
#:make-flags (list (string-append "LIBDIR=" (assoc-ref %outputs "out")
"/lib/ocaml/site-lib/cmdliner"))
#:phases
(modify-phases %standard-phases
(replace 'install
;; The makefile says 'adjust on cli invocation'
(lambda* (#:key outputs #:allow-other-keys)
(let ((out (assoc-ref outputs "out")))
(invoke "make" "install" (string-append "PREFIX=" out))
#t)))
(delete 'configure))))
(properties
`((ocaml4.02-variant . ,(delay ocaml4.02-cmdliner))))
(home-page "http://erratique.ch/software/cmdliner")
(synopsis "Declarative definition of command line interfaces for OCaml")
(description "Cmdliner is a module for the declarative definition of command
@ -1650,7 +1832,17 @@ most of the POSIX and GNU conventions.")
(license license:bsd-3)))
(define-public ocaml4.02-cmdliner
(package-with-ocaml4.02 ocaml-cmdliner))
(let ((base (package-with-ocaml4.02 (strip-ocaml4.02-variant ocaml-cmdliner))))
(package
(inherit base)
(version "1.0.2")
(source (origin
(method url-fetch)
(uri (string-append "http://erratique.ch/software/cmdliner/releases/"
"cmdliner-" version ".tbz"))
(sha256
(base32
"18jqphjiifljlh9jg8zpl6310p3iwyaqphdkmf89acyaix0s4kj1")))))))
(define-public ocaml-fmt
(package
@ -1764,18 +1956,19 @@ simple (yet expressive) query language to select the tests to run.")
(name "ocaml-ppx-tools")
(version "5.1+4.06.0")
(source
(origin
(method url-fetch)
(uri (string-append "https://github.com/alainfrisch/ppx_tools/archive/"
version ".tar.gz"))
(sha256 (base32
"0mncpy9v2mcjgnj7s2vqpp2b1ixv54djicfx66ic9wny9d202gj1"))))
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/alainfrisch/ppx_tools.git")
(commit version)))
(sha256 (base32
"1ww4cspdpgjjsgiv71s0im5yjkr3544x96wsq1vpdacq7dr7zwiw"))))
(build-system ocaml-build-system)
(arguments
`(#:phases (modify-phases %standard-phases (delete 'configure))
#:tests? #f))
(properties
`((ocaml4.02-variant . ,(delay ocaml4.02-ppx-tools))))
`((ocaml4.02-variant . ,(delay ocaml4.02-ppx-tools))))
(home-page "https://github.com/alainfrisch/ppx_tools")
(synopsis "Tools for authors of ppx rewriters and other syntactic tools")
(description "Tools for authors of ppx rewriters and other syntactic tools.")
@ -1787,12 +1980,13 @@ simple (yet expressive) query language to select the tests to run.")
(inherit base)
(version "5.0+4.02.0")
(source
(origin
(method url-fetch)
(uri (string-append "https://github.com/alainfrisch/ppx_tools/archive/"
version ".tar.gz"))
(sha256 (base32
"0rjg4rngi8k9873z4zq95zn9hj8qyw1vcrf11y15aqasfpqq16rc")))))))
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/alainfrisch/ppx_tools.git")
(commit version)))
(sha256
(base32 "16drjk0qafjls8blng69qiv35a84wlafpk16grrg2i3x19p8dlj8")))))))
(define-public ocaml-react
(package
@ -2088,14 +2282,15 @@ representation of the data.")
(package
(name "ocaml-ulex")
(version "1.2")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/whitequark/ulex/archive/v"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"16gnbhqs6y2v89vw4igzvxdf2g8ybh5643636824aldcv8sscac0"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/whitequark/ulex.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "08yf2x9a52l2y4savjqfjd2xy4pjd1rpla2ylrr9qrz1drpfw4ic"))))
(build-system ocaml-build-system)
(arguments
`(#:phases (modify-phases %standard-phases (delete 'configure))
@ -2761,13 +2956,14 @@ programs. It allows the definition of simple macros and file inclusion. Cpp oi
(name "ocaml4.02-ppx-deriving")
(version "4.1")
(source
(origin
(method url-fetch)
(uri (string-append "https://github.com/whitequark/ppx_deriving//archive/v"
version ".tar.gz"))
(sha256 (base32
"1fr16g121j6zinwcprzlhx2py4271n9jzs2m9hq2f3qli2b1p0vl"))
(file-name (string-append name "-" version ".tar.gz"))))
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/whitequark/ppx_deriving.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0cy9p8d8cbcxvqyyv8fz2z9ypi121zrgaamdlp4ld9f3jnwz7my9"))))
(build-system ocaml-build-system)
(native-inputs
`(("js-build-tools" ,ocaml4.02-js-build-tools)
@ -2782,13 +2978,17 @@ programs. It allows the definition of simple macros and file inclusion. Cpp oi
#:findlib ,ocaml4.02-findlib
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'make-git-checkout-writable
(lambda _
(for-each make-file-writable (find-files "."))
#t))
(delete 'configure)
(add-before 'install 'fix-environment
(lambda* (#:key outputs #:allow-other-keys)
;; the installation procedures looks for the installed module
(setenv "OCAMLPATH"
(string-append (getenv "OCAMLPATH") ":"
(getenv "OCAMLFIND_DESTDIR"))))))))
(add-before 'install 'fix-environment
(lambda* (#:key outputs #:allow-other-keys)
;; the installation procedures looks for the installed module
(setenv "OCAMLPATH"
(string-append (getenv "OCAMLPATH") ":"
(getenv "OCAMLFIND_DESTDIR"))))))))
(home-page "https://github.com/whitequark/ppx_deriving/")
(synopsis "Type-driven code generation for OCaml >=4.02")
(description "Ppx_deriving provides common infrastructure for generating
@ -3316,14 +3516,15 @@ new record values.")
(package
(name "ocaml-seq")
(version "0.1")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/c-cube/seq/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"02lb2d9i12bxrz2ba5wygk2bycan316skqlyri0597q7j9210g8r"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/c-cube/seq.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "1cjpsc7q76yfgq9iyvswxgic4kfq2vcqdlmxjdjgd4lx87zvcwrv"))))
(build-system ocaml-build-system)
(arguments
`(#:tests? #f
@ -3342,9 +3543,9 @@ new record values.")
version=\"[distributed with ocaml]\"
description=\"dummy package for compatibility\"
requires=\"\"")))
#t))))))
#t))))))
(properties
`((ocaml4.02-variant . ,(delay ocaml4.02-seq))))
`((ocaml4.02-variant . ,(delay ocaml4.02-seq))))
(home-page "https://github.com/c-cube/seq")
(synopsis "OCaml's standard iterator type")
(description "This package is a compatibility package for OCaml's
@ -3365,14 +3566,15 @@ standard iterator type starting from 4.07.")
(package
(name "ocaml-re")
(version "1.8.0")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/ocaml/ocaml-re//archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"1pdb0mr6z5ax6szblr3f5lbdnqq9grm97cmsfjmdma60yrx2rqhd"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/ocaml/ocaml-re.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "0ch6hvmm4ym3w2vghjxf3ka5j1023a37980fqi4zcb7sx756z20i"))))
(build-system dune-build-system)
(arguments
`(#:tests? #f
@ -3751,14 +3953,15 @@ writing to these structures, and they are accessed via the Bigarray module.")
(package
(name "ocaml4.02-ezjsonm")
(version "0.4.3")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/mirage/ezjsonm/archive/"
version ".tar.gz"))
(sha256
(base32
"1kag0z2xlk4rw73a240dmkxh9rj6psxxcxkm7d7z0rrj6hzjajgq"))
(file-name (string-append name "-" version ".tar.gz"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/mirage/ezjsonm.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "1y6p3ga6vj1wx5dyns7hjgd0qgrrn2hnn323a7y5didgci5pybls"))))
(build-system ocaml-build-system)
(native-inputs
`(("alcotest" ,ocaml4.02-alcotest)))
@ -3783,14 +3986,15 @@ JSON.")
(package
(name "ocaml4.02-uri")
(version "1.9.2")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/mirage/ocaml-uri/archive/v"
version ".tar.gz"))
(sha256
(base32
"02bzrag79prx261rxf9mlak749pwf4flpfl8p012x1xznv9m0clc"))
(file-name (string-append name "-" version ".tar.gz"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/mirage/ocaml-uri.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "137pg8j654x7r0d1664iy2zp3l82nki1kkh921lwdrwc5qqdl6jx"))))
(build-system ocaml-build-system)
(arguments
`(#:ocaml ,ocaml-4.02
@ -3838,14 +4042,15 @@ Format module of the OCaml standard library.")
(package
(name "optcomp")
(version "1.6")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/diml/optcomp/archive/"
version ".tar.gz"))
(sha256
(base32
"0hhhb2gisah1h22zlg5iszbgqxdd7x85cwd57bd4mfkx9l7dh8jh"))
(file-name (string-append name "-" version ".tar.gz"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/diml/optcomp.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "0bm4f3fs9g1yiz48hdxvcjwnrgymwisqilxhmm87ndz81wp47zfy"))))
(build-system ocaml-build-system)
(arguments
`(#:ocaml ,ocaml-4.02
@ -3867,14 +4072,15 @@ cpp-like directives.")
(package
(name "ocaml-piqilib")
(version "0.6.14")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/alavrik/piqi/archive/v"
version ".tar.gz"))
(sha256
(base32
"1ssccnwqzfyf7syfq2fv4zyhwayxwd75rhq9y28mvq1w6qbww4l7"))
(file-name (string-append name "-" version ".tar.gz"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/alavrik/piqi.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0lyqllmfsxmwlg7qidy92kvxi9n39lvachmydcyi81f8p07ykd2d"))))
(build-system ocaml-build-system)
(arguments
`(#:phases
@ -4135,15 +4341,15 @@ library is currently designed for Unicode Standard 3.2.")
(package
(name "ocaml-jbuilder")
(version "1.0+beta16")
(source (origin
(method url-fetch)
(uri (string-append
"https://github.com/janestreet/jbuilder/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"1cy07pwvbrlysszs938yd74yyvvbgkffpb82qrjph77zf0h2gdi7"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/janestreet/jbuilder.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "1y3fgf570w3vrnhianrg26jy5j749zczq3f78s2dy5ylbp1hrx71"))))
(build-system ocaml-build-system)
(arguments
`(#:ocaml ,ocaml-4.02
@ -4171,14 +4377,15 @@ is provide a description of your project and Jbuilder will do the rest.")
(package
(name "ocaml-zed")
(version "1.6")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/diml/zed/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"19m5vrj60vg1b63qfsv0aabdlzgn40cqmx65s3wafqi4fs9xp6jn"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/diml/zed.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "00hhxcjf3bj3w2qm8nzs9x6vrqkadf4i0277s5whzy2rmiknj63v"))))
(build-system ocaml-build-system)
(arguments
`(#:phases
@ -4212,12 +4419,13 @@ connect an engine to your inputs and rendering functions to get an editor.")
(version "1.13")
(source
(origin
(method url-fetch)
(uri (string-append "https://github.com/diml/lambda-term/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/diml/lambda-term.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "1hy5ryagqclgdm9lzh1qil5mrynlypv7mn6qm858hdcnmz9zzn0l"))))
(base32 "0wwib20b2ir3h2g9zwhzn04cv160psb805skp8v23wqgyn5cnbh8"))))
(build-system dune-build-system)
(arguments
`(#:build-flags (list "--profile" "release")
@ -4243,14 +4451,15 @@ instead of bindings to a C library.")
(package
(name "ocaml-utop")
(version "2.2.0")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/ocaml-community/utop/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"1414snwmqaxs1x8wbpjf6fn3jsl01hq0phrr7639xmb5vh15mgd4"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/ocaml-community/utop.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "02hjkc0rdzfq3bqy9mqm5wmw312r3187v9cl66ynb6hxkj6s3glb"))))
(build-system gnu-build-system)
(arguments
`(#:test-target "test"
@ -4824,6 +5033,26 @@ Atom.")
the OCaml language.")
(license license:gpl3+)))
(define-public ocaml-gsl-1
(package
(inherit ocaml-gsl)
(version "1.19.3")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/mmottl/gsl-ocaml"
"/releases/download/v"
version "/gsl-ocaml-" version ".tar.gz"))
(sha256
(base32
"0nzp43hp8pbjqkrxnwp5lgjrabxayf61h18fjaydi0s5faq6f3xh"))))
(build-system ocaml-build-system)
(inputs
`(("gsl" ,gsl)))
(native-inputs
`(("ocamlbuild" ,ocamlbuild)))
(arguments '())
(propagated-inputs '())))
(define-public cubicle
(package
(name "cubicle")

2
gnu/packages/parallel.scm
View File

@ -136,7 +136,7 @@ and they are executed on lists of files, hosts, users or other items.")
(build-system gnu-build-system)
(arguments
`(#:configure-flags
(list "--enable-pam"
(list "--enable-pam" "--sysconfdir=/etc/slurm"
(string-append "--with-freeipmi=" (assoc-ref %build-inputs "freeipmi"))
(string-append "--with-hwloc=" (assoc-ref %build-inputs "hwloc"))
(string-append "--with-json=" (assoc-ref %build-inputs "json-c"))

30
gnu/packages/patches/docker-use-fewer-modprobes.patch
View File

@ -103,17 +103,35 @@ See <https://github.com/moby/moby/pull/38930>.
--- docker-18.09.0-checkout/vendor/github.com/docker/libnetwork/ns/init_linux.go.orig 2019-03-19 11:23:20.738316699 +0100
+++ docker-18.09.0-checkout/vendor/github.com/docker/libnetwork/ns/init_linux.go 2019-03-19 11:27:57.149753073 +0100
@@ -100,12 +100,7 @@
@@ -76,12 +76,8 @@ func NlHandle() *netlink.Handle {
func getSupportedNlFamilies() []int {
fams := []int{syscall.NETLINK_ROUTE}
// NETLINK_XFRM test
- if err := loadXfrmModules(); err != nil {
- if checkXfrmSocket() != nil {
- logrus.Warnf("Could not load necessary modules for IPSEC rules: %v", err)
- } else {
- fams = append(fams, syscall.NETLINK_XFRM)
- }
+ if err := checkXfrmSocket(); err != nil {
+ logrus.Warnf("Could not load necessary modules for IPSEC rules: %v", err)
} else {
fams = append(fams, syscall.NETLINK_XFRM)
}
@@ -99,16 +95,6 @@ func getSupportedNlFamilies() []int {
return fams
}
func loadXfrmModules() error {
-func loadXfrmModules() error {
- if out, err := exec.Command("modprobe", "-va", "xfrm_user").CombinedOutput(); err != nil {
- return fmt.Errorf("Running modprobe xfrm_user failed with message: `%s`, error: %v", strings.TrimSpace(string(out)), err)
- }
- if out, err := exec.Command("modprobe", "-va", "xfrm_algo").CombinedOutput(); err != nil {
- return fmt.Errorf("Running modprobe xfrm_algo failed with message: `%s`, error: %v", strings.TrimSpace(string(out)), err)
- }
+ // Those are automatically loaded when someone opens the socket anyway.
return nil
}
- return nil
-}
-
// API check on required xfrm modules (xfrm_user, xfrm_algo)
func checkXfrmSocket() error {
fd, err := syscall.Socket(syscall.AF_NETLINK, syscall.SOCK_RAW, syscall.NETLINK_XFRM)

61
gnu/packages/patches/idris-test-no-node.patch 100644
View File

@ -0,0 +1,61 @@
From 6c52e1b902b869c25e2fe39cff6364143a04da61 Mon Sep 17 00:00:00 2001
From: Niklas Larsson <niklas@mm.st>
Date: Tue, 11 Dec 2018 19:56:22 +0100
Subject: [PATCH] Only check for Node when required
---
test/TestRun.hs | 34 ++++++++++++++++++++--------------
1 file changed, 20 insertions(+), 14 deletions(-)
diff --git a/test/TestRun.hs b/test/TestRun.hs
index c7db9fdcd..4809911f3 100644
--- a/test/TestRun.hs
+++ b/test/TestRun.hs
@@ -11,6 +11,7 @@ import Data.Proxy
import Data.Typeable
import Options.Applicative
import System.Directory
+import System.Environment
import System.Exit
import System.FilePath ((</>))
import System.Info
@@ -103,20 +104,25 @@ runTest path flags = do
normalise (x : xs) = x : normalise xs
normalise [] = []
+checkNode :: IO ()
+checkNode = do
+ nodePath <- findExecutable "node"
+ nodejsPath <- findExecutable "nodejs"
+ let node = nodePath <|> nodejsPath
+ case node of
+ Nothing -> do
+ putStrLn "For running the test suite against Node, node must be installed."
+ exitFailure
+ Just _ -> return ()
+
main :: IO ()
main = do
- nodePath <- findExecutable "node"
- nodejsPath <- findExecutable "nodejs"
- let node = nodePath <|> nodejsPath
- case node of
- Nothing -> do
- putStrLn "For running the test suite against Node, node must be installed."
- exitFailure
- Just _ -> do
- defaultMainWithIngredients ingredients $
+ args <- getArgs
+ when ("--node" `elem` args) checkNode
+ defaultMainWithIngredients ingredients $
askOption $ \(NodeOpt node) ->
- let (codegen, flags) = if node then (JS, ["--codegen", "node"])
- else (C , [])
- in
- mkGoldenTests (testFamiliesForCodegen codegen)
- (flags ++ idrisFlags)
+ let (codegen, flags) = if node then (JS, ["--codegen", "node"])
+ else (C , [])
+ in
+ mkGoldenTests (testFamiliesForCodegen codegen) (flags ++ idrisFlags)
+

34
gnu/packages/patches/knot-include-system-lmdb-header.patch
View File

@ -1,34 +0,0 @@
From: Tobias Geerinckx-Rice <me@tobias.gr>
Date: Wed, 20 Mar 2019 00:08:00 +0100
Subject: [PATCH] gnu: knot: Include system <lmdb.h>.
Copied verbatim from Knot master[0].
[0]: https://gitlab.labs.nic.cz/knot/knot-dns/commit/b557430cffbb1c6b30617a394b02acc514e7e536
From b557430cffbb1c6b30617a394b02acc514e7e536 Mon Sep 17 00:00:00 2001
From: Daniel Salzman <daniel.salzman@nic.cz>
Date: Wed, 6 Mar 2019 17:35:44 +0100
Subject: [PATCH] journal: include proper header <lmdb.h>
fixes #638
---
src/knot/journal/knot_lmdb.h | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/src/knot/journal/knot_lmdb.h b/src/knot/journal/knot_lmdb.h
index 35a88845c..b1d09cbb4 100644
--- a/src/knot/journal/knot_lmdb.h
+++ b/src/knot/journal/knot_lmdb.h
@@ -16,7 +16,7 @@
#pragma once
-#include "contrib/lmdb/lmdb.h"
+#include <lmdb.h>
#include <stdbool.h>
#include <stdlib.h>
--
2.18.1

16
gnu/packages/patches/kodi-set-libcurl-ssl-parameters.patch 100644
View File

@ -0,0 +1,16 @@
Kodi doesn't set the CAPATH and CAINFO parameters for libcurl. To make HTTPS
connections work we can set them based on SSL_CERT_DIR and SSL_CERT_FILE.
--- a/xbmc/filesystem/CurlFile.cpp
+++ b/xbmc/filesystem/CurlFile.cpp
@@ -626,5 +626,9 @@
// Setup allowed TLS/SSL ciphers. New versions of cURL may deprecate things that are still in use.
if (!m_cipherlist.empty())
g_curlInterface.easy_setopt(h, CURLOPT_SSL_CIPHER_LIST, m_cipherlist.c_str());
+
+ // Load certificate data from environment paths
+ g_curlInterface.easy_setopt(m_state->m_easyHandle, CURLOPT_CAPATH, getenv("SSL_CERT_DIR"));
+ g_curlInterface.easy_setopt(m_state->m_easyHandle, CURLOPT_CAINFO, getenv("SSL_CERT_FILE"));
}
void CCurlFile::SetRequestHeaders(CReadState* state)

25
gnu/packages/patches/ocaml-dose3-Add-unix-as-dependency-to-dose3.common-in-META.in.patch 100644
View File

@ -0,0 +1,25 @@
From b94cf24739818e5aff397e0a83b19ea32dc81f42 Mon Sep 17 00:00:00 2001
From: Louis Gesbert <louis.gesbert@ocamlpro.com>
Date: Tue, 6 Feb 2018 10:15:45 +0100
Subject: [PATCH 3/3] Add "unix" as dependency to dose3.common in META.in
---
META.in | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/META.in b/META.in
index aa2cd8d..0f9d337 100644
--- a/META.in
+++ b/META.in
@@ -8,7 +8,7 @@ package "common" (
version = "@PACKAGE_VERSION@"
archive(byte) = "common.cma"
archive(native) = "common.cmxa"
-requires = "extlib, re.pcre, cudf, @ZIP@, @BZ2@"
+requires = "extlib, re.pcre, cudf, unix, @ZIP@, @BZ2@"
)
package "algo" (
--
2.11.0

52
gnu/packages/patches/ocaml-dose3-Fix-for-ocaml-4.06.patch 100644
View File

@ -0,0 +1,52 @@
From aeca7656f499d7f4595319858f242276920e31bb Mon Sep 17 00:00:00 2001
From: Louis Gesbert <louis.gesbert@ocamlpro.com>
Date: Sat, 2 Dec 2017 12:51:01 +0100
Subject: [PATCH] Fix for ocaml 4.06
---
common/criteria_lexer.mll | 8 ++++----
common/util.ml | 2 +-
2 files changed, 5 insertions(+), 5 deletions(-)
diff --git a/common/criteria_lexer.mll b/common/criteria_lexer.mll
index 71f9178..fc4eae3 100644
--- a/common/criteria_lexer.mll
+++ b/common/criteria_lexer.mll
@@ -18,7 +18,7 @@
let c = Lexing.lexeme_char lexbuf 2 in (* the delimiter can be any character *)
(* find the terminating delimiter *)
let endpos =
- try String.index_from lexbuf.lex_buffer (lexbuf.lex_start_pos + 3) c with
+ try Bytes.index_from lexbuf.lex_buffer (lexbuf.lex_start_pos + 3) c with
|Invalid_argument _ ->
raise (Format822.Syntax_error (
Format822.error lexbuf "String too short"))
@@ -27,9 +27,9 @@
Format822.error lexbuf (Printf.sprintf "cannot find: %c" c)))
in
let len = endpos - (lexbuf.lex_start_pos + 3) in
- let s = String.sub lexbuf.lex_buffer (lexbuf.lex_start_pos + 3) len in
- lexbuf.Lexing.lex_curr_pos <- lexbuf.Lexing.lex_start_pos + ((String.length s)+4);
- s
+ let s = Bytes.sub lexbuf.lex_buffer (lexbuf.lex_start_pos + 3) len in
+ lexbuf.Lexing.lex_curr_pos <- lexbuf.Lexing.lex_start_pos + ((Bytes.length s)+4);
+ Bytes.to_string s
}
diff --git a/common/util.ml b/common/util.ml
index 598f266..36ca3d1 100644
--- a/common/util.ml
+++ b/common/util.ml
@@ -87,7 +87,7 @@ module MakeMessages(X : sig val label : string end) = struct
let clean label =
try
let s = Filename.chop_extension (Filename.basename label) in
- String.capitalize s
+ String.capitalize_ascii s
with Invalid_argument _ -> label
let create ?(enabled=false) label =
--
2.11.0

133
gnu/packages/patches/ocaml-dose3-Install-mli-cmx-etc.patch 100644
View File

@ -0,0 +1,133 @@
From b5314c20d8e3caf62fe0dc96ad937a2950158b23 Mon Sep 17 00:00:00 2001
From: Louis Gesbert <louis.gesbert@ocamlpro.com>
Date: Thu, 2 Mar 2017 12:19:56 +0100
Subject: [PATCH] Install mli, cmx, etc.
---
Makefile | 26 +++++++++++++-------------
1 file changed, 13 insertions(+), 13 deletions(-)
diff --git a/Makefile b/Makefile
index 09464ff..5044d7f 100644
--- a/Makefile
+++ b/Makefile
@@ -56,7 +56,7 @@ $(DOSELIBS)/cudf.%:
@for i in _build/cudf/cudf.*; do \
if [ -e $$i ]; then \
cp $$i $(DOSELIBS) ; \
- rm -f $(DOSELIBS)/*.mlpack $(DOSELIBS)/*.cmx ; \
+ rm -f $(DOSELIBS)/*.mlpack ; \
fi ; \
done
@@ -67,7 +67,7 @@ $(DOSELIBS)/common.%: common/*.ml common/*.mli
if [ -e $$i ]; then \
cp $$i $(DOSELIBS) ; \
rm $$i ;\
- rm -f $(DOSELIBS)/*.mlpack $(DOSELIBS)/*.cmx ; \
+ rm -f $(DOSELIBS)/*.mlpack ; \
fi ; \
done
@@ -78,7 +78,7 @@ $(DOSELIBS)/versioning.%: versioning/*.ml versioning/*.mli
if [ -e $$i ]; then \
cp $$i $(DOSELIBS) ; \
rm $$i ;\
- rm -f $(DOSELIBS)/*.mlpack $(DOSELIBS)/*.cmx ; \
+ rm -f $(DOSELIBS)/*.mlpack ; \
fi ; \
done
@@ -88,7 +88,7 @@ $(DOSELIBS)/algo.%: algo/*.ml algo/*.mli $(DOSELIBS)/common.%
if [ -e $$i ]; then \
cp $$i $(DOSELIBS) ; \
rm $$i ;\
- rm -f $(DOSELIBS)/*.mlpack $(DOSELIBS)/*.cmx ; \
+ rm -f $(DOSELIBS)/*.mlpack ; \
fi ; \
done
@@ -98,7 +98,7 @@ $(DOSELIBS)/debian.%: deb/*.ml deb/*.mli $(DOSELIBS)/pef.%
if [ -e $$i ]; then \
cp $$i $(DOSELIBS) ; \
rm $$i ;\
- rm -f $(DOSELIBS)/*.mlpack $(DOSELIBS)/*.cmx ; \
+ rm -f $(DOSELIBS)/*.mlpack ; \
fi ; \
done
@@ -108,7 +108,7 @@ $(DOSELIBS)/opam.%: opam/*.ml opam/*.mli $(DOSELIBS)/pef.%
if [ -e $$i ]; then \
cp $$i $(DOSELIBS) ; \
rm $$i ;\
- rm -f $(DOSELIBS)/*.mlpack $(DOSELIBS)/*.cmx ; \
+ rm -f $(DOSELIBS)/*.mlpack ; \
fi ; \
done
@@ -118,7 +118,7 @@ $(DOSELIBS)/npm.%: npm/*.ml npm/*.mli $(DOSELIBS)/versioning.% $(DOSELIBS)/pef.%
if [ -e $$i ]; then \
cp $$i $(DOSELIBS) ; \
rm $$i ;\
- rm -f $(DOSELIBS)/*.mlpack $(DOSELIBS)/*.cmx ; \
+ rm -f $(DOSELIBS)/*.mlpack ; \
fi ; \
done
@@ -128,7 +128,7 @@ $(DOSELIBS)/rpm.%: rpm/*.ml $(DOSELIBS)/algo.%
if [ -e $$i ]; then \
cp $$i $(DOSELIBS) ; \
rm $$i ;\
- rm -f $(DOSELIBS)/*.mlpack $(DOSELIBS)/*.cmx ; \
+ rm -f $(DOSELIBS)/*.mlpack ; \
fi ; \
done
@@ -138,7 +138,7 @@ $(DOSELIBS)/pef.%: pef/*.ml pef/*.mli
if [ -e $$i ]; then \
cp $$i $(DOSELIBS) ; \
rm $$i ;\
- rm -f $(DOSELIBS)/*.mlpack $(DOSELIBS)/*.cmx ; \
+ rm -f $(DOSELIBS)/*.mlpack ; \
fi ; \
done
@@ -148,7 +148,7 @@ $(DOSELIBS)/csw.%: opencsw/*.ml $(DOSELIBS)/versioning.%
if [ -e $$i ]; then \
cp $$i $(DOSELIBS) ; \
rm $$i ;\
- rm -f $(DOSELIBS)/*.mlpack $(DOSELIBS)/*.cmx ; \
+ rm -f $(DOSELIBS)/*.mlpack ; \
fi ; \
done
@@ -158,7 +158,7 @@ $(DOSELIBS)/doseparse.%: $(DOSELIBS)/pef.% $(DOSELIBS)/debian.%
if [ -e $$i ]; then \
cp $$i $(DOSELIBS) ; \
rm $$i ;\
- rm -f $(DOSELIBS)/*.mlpack $(DOSELIBS)/*.cmx $(DOSELIBS)/*.ml ; \
+ rm -f $(DOSELIBS)/*.mlpack $(DOSELIBS)/*.ml ; \
fi ; \
done
@@ -168,7 +168,7 @@ $(DOSELIBS)/doseparseNoRpm.%: $(DOSELIBS)/pef.% $(DOSELIBS)/debian.%
if [ -e $$i ]; then \
cp $$i $(DOSELIBS) ;\
rm $$i ;\
- rm -f $(DOSELIBS)/*.mlpack $(DOSELIBS)/*.cmx ;\
+ rm -f $(DOSELIBS)/*.mlpack ;\
fi ; \
done
@@ -223,7 +223,7 @@ INSTALL_STUFF_ = META
INSTALL_STUFF_ += $(wildcard _build/doselibs/*.cma _build/doselibs/*.cmi)
INSTALL_STUFF_ += $(wildcard _build/doselibs/*.cmxa _build/doselibs/*.cmxs)
INSTALL_STUFF_ += $(wildcard _build/doselibs/*.a)
-#INSTALL_STUFF_ += $(wildcard _build/*/*.mli)
+INSTALL_STUFF_ += $(wildcard _build/doselibs/*.mli) $(wildcard _build/doselibs/*.cmti) $(wildcard _build/doselibs/*.cmx)
INSTALL_STUFF_ += $(wildcard _build/rpm/*.so)
exclude_cudf = $(wildcard _build/doselibs/*cudf* _build/cudf/*)
--
2.11.0

9
gnu/packages/patches/ocaml-dose3-dont-make-printconf.patch 100644
View File

@ -0,0 +1,9 @@
--- a/configure
+++ b/configure
@@ -6552,6 +6552,3 @@ if test -n "$ac_unrecognized_opts" && test "$enable_option_checking" != no; then
{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: unrecognized options: $ac_unrecognized_opts" >&5
$as_echo "$as_me: WARNING: unrecognized options: $ac_unrecognized_opts" >&2;}
fi
-
-
-make printconf

45
gnu/packages/patches/quilt-getopt-nondigit-param.patch
View File

@ -1,45 +0,0 @@
From: Jean Delvare <jdelvare@suse.de>
Subject: compat/getopt: Allow non-digit parameter embedded in short option
The compatibility getopt script allows only digit parameters to be
embedded in short options. Util-linux's getopt implementation does
not have such a restriction and allows any parameter to be embedded
in short options. As a consequence, using the compatibility getopt
script would choke for example on "-pab", which is a legal option
of the "quilt refresh" command.
Remove the limitation on digits so that the compatibility getopt
script allows what util-linux allows. This fixes the second half
of bug #54772:
https://savannah.nongnu.org/bugs/index.php?54772
As a side note, this feature of the compatibility script was broken
anyway, as it would output the digits in reverse order.
Signed-off-by: Jean Delvare <jdelvare@suse.de>
---
compat/getopt.in | 13 ++++---------
1 file changed, 4 insertions(+), 9 deletions(-)
--- quilt.orig/compat/getopt.in 2018-10-03 16:05:56.818667040 +0200
+++ quilt/compat/getopt.in 2018-10-03 16:12:17.624841732 +0200
@@ -108,15 +108,10 @@ foreach my $word (@words) {
if (scalar(@letters) == 0) {
$need_param = $letter;
} else {
- # short options can have numerical args
- # embedded in the short option list: -UO
- die "unexpected character after option $letter"
- if ($letters[$#letters] !~ /[0-9]/);
- my @digits;
- while (scalar(@letters) && ($letters[$#letters] =~ /[0-9]/)) {
- push @digits, pop @letters;
- }
- push @options, quote_word(join('', reverse @digits));
+ # short options can have args
+ # embedded in the short option list
+ push @options, quote_word(join('', reverse @letters));
+ @letters = ();
}
}
}

58
gnu/packages/patches/quilt-getopt-second-separator.patch
View File

@ -1,58 +0,0 @@
From: Jean Delvare <jdelvare@suse.de>
Subject: compat/getopt: Handle a second separator
getopt can be passed 2 '--' separators. The first one tells that
getopt options are over and target program options start. The second
one tells that the target program's options are over and following
arguments should be treated as non-options even if they look like
options.
This second separator was not handled, causing the compatibility
getopt script to treat the following arguments as options, eventually
failing one way or another.
Properly detect and handle the second separator. This fixes the first
half of bug #54772:
https://savannah.nongnu.org/bugs/index.php?54772
Signed-off-by: Jean Delvare <jdelvare@suse.de>
---
compat/getopt.in | 13 ++++++++++---
1 file changed, 10 insertions(+), 3 deletions(-)
--- quilt.orig/compat/getopt.in 2018-10-03 15:23:21.147620172 +0200
+++ quilt/compat/getopt.in 2018-10-03 16:05:56.818667040 +0200
@@ -8,12 +8,12 @@
use strict;
-my $opts;
+my $opts = '';
my @words;
my $found_sep = 0;
foreach my $arg (@ARGV) {
- if ($arg eq '--') {
+ if (!$found_sep && $arg eq '--') {
$found_sep = 1;
}
else {
@@ -62,10 +62,17 @@ sub quote_word
return "'$word'";
}
+# there can be a second separator, to inhibit processing following arguments
+# as options
+$found_sep = 0;
foreach my $word (@words) {
+ if ($word eq '--') {
+ $found_sep = 1;
+ next;
+ }
# allow '-' to be an option value
- if (!$need_param && $word !~ /^-./) {
+ if ($found_sep || (!$need_param && $word !~ /^-./)) {
push @barewords, quote_word($word);
next;
}

41
gnu/packages/patches/quilt-test-fix-regex.patch
View File

@ -1,41 +0,0 @@
From 5193b137b5a9034ce79946edd40760df2f63a82a Mon Sep 17 00:00:00 2001
From: Jean Delvare <jdelvare@suse.de>
Date: Tue, 25 Apr 2017 15:17:53 +0200
Subject: test: Escape curly braces in regex
Curly braces in perl regex are supposed to be escaped, recent
versions of perl complain when they aren't:
Unescaped left brace in regex is deprecated, passed through in regex; marked by <-- HERE in m/%{ <-- HERE (\w+)}/ at ./run line 114.
Unescaped left brace in regex is deprecated, passed through in regex; marked by <-- HERE in m/%{ <-- HERE \?}/ at ./run line 290.
Signed-off-by: Jean Delvare <jdelvare@suse.de>
---
test/run | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/test/run b/test/run
index 942014e..03afc7a 100755
--- a/test/run
+++ b/test/run
@@ -112,7 +112,7 @@ sub flush_output()
sub substitute_vars($)
{
my ($line) = @_;
- $line =~ s[%{(\w+)}][defined $ENV{$1} ? $ENV{$1} : ""]eg;
+ $line =~ s[%\{(\w+)\}][defined $ENV{$1} ? $ENV{$1} : ""]eg;
return $line;
}
@@ -288,7 +288,7 @@ while (defined(my $line = <SOURCE>)) {
# Parse the next command
if ($line =~ s/^\s*\$ ?//) {
# Substitute %{?} with the last command's status
- $line =~ s[%{\?}][$last_status]eg;
+ $line =~ s[%\{\?\}][$last_status]eg;
chomp($prog = substitute_vars($line));
$prog_line = $lineno;
--
cgit v1.0-41-gc330

55
gnu/packages/patches/synfigstudio-fix-ui-with-gtk3.patch
View File

@ -1,55 +0,0 @@
Downloaded from
https://github.com/synfig/synfig/commit/b9c3b73ee35b83c4d9183c800809040cef98b2f2.patch
Without this patch the UI of Synfig Studio (when built with the latest version
of GTK) displays very large buttons in the header of every frame.
This patch can be removed with the next release.
From b9c3b73ee35b83c4d9183c800809040cef98b2f2 Mon Sep 17 00:00:00 2001
From: caryoscelus <caryoscelus@gmx.com>
Date: Wed, 25 Jan 2017 18:34:39 +0300
Subject: [PATCH] Fix dock drop area size
Fixes #227
By using Frame instead of Button we avoid intrusive Gtk themes
from forcing huge drop area size.
---
synfig-studio/src/gui/docks/dockdroparea.cpp | 15 ++++++++++-----
1 file changed, 10 insertions(+), 5 deletions(-)
diff --git a/src/gui/docks/dockdroparea.cpp b/synfig-studio/src/gui/docks/dockdroparea.cpp
index 0f8936fdb..e012282f0 100644
--- a/src/gui/docks/dockdroparea.cpp
+++ b/src/gui/docks/dockdroparea.cpp
@@ -35,7 +35,7 @@
#include "app.h"
#include "docks/dockdroparea.h"
#include "docks/dockmanager.h"
-#include <gtkmm/button.h>
+#include <gtkmm/frame.h>
#endif
@@ -61,10 +61,15 @@ DockDropArea::DockDropArea(Gtk::Widget *target):
std::vector<Gtk::TargetEntry> listTargets;
listTargets.push_back( Gtk::TargetEntry("SYNFIG_DOCK") );
- Gtk::Button *button_left = manage(new Gtk::Button());
- Gtk::Button *button_right = manage(new Gtk::Button());
- Gtk::Button *button_top = manage(new Gtk::Button());
- Gtk::Button *button_bottom = manage(new Gtk::Button());
+ Gtk::Frame *button_left = manage(new Gtk::Frame());
+ Gtk::Frame *button_right = manage(new Gtk::Frame());
+ Gtk::Frame *button_top = manage(new Gtk::Frame());
+ Gtk::Frame *button_bottom = manage(new Gtk::Frame());
+
+ button_left->set_size_request(20, 10);
+ button_right->set_size_request(20, 10);
+ button_top->set_size_request(20, 10);
+ button_bottom->set_size_request(20, 10);
button_left->drag_dest_set(listTargets);
button_right->drag_dest_set(listTargets);

202
gnu/packages/patches/webkitgtk-sse2.patch 100644
View File

@ -0,0 +1,202 @@
Fix build on i686.
This patch is taken from upstream, with ChangeLog entries omitted.
From 5048338c5f21605441c6833907d1136ac9640b35 Mon Sep 17 00:00:00 2001
From: "mcatanzaro@igalia.com"
<mcatanzaro@igalia.com@268f45cc-cd09-0410-ab3c-d52691b4dbfc>
Date: Wed, 10 Apr 2019 18:27:25 +0000
Subject: [PATCH] Unreviewed, rolling out r243989.
Broke i686 builds
Reverted changeset:
"[CMake] Detect SSE2 at compile time"
https://bugs.webkit.org/show_bug.cgi?id=196488
https://trac.webkit.org/changeset/243989
git-svn-id: http://svn.webkit.org/repository/webkit/trunk@244138 268f45cc-cd09-0410-ab3c-d52691b4dbfc
---
CMakeLists.txt | 10 ---
ChangeLog | 12 ++++
Source/JavaScriptCore/ChangeLog | 12 ++++
.../assembler/MacroAssemblerX86Common.cpp | 7 ++
.../assembler/MacroAssemblerX86Common.h | 30 +++++++++
Source/cmake/FindSSE2.cmake | 65 -------------------
6 files changed, 61 insertions(+), 75 deletions(-)
delete mode 100644 Source/cmake/FindSSE2.cmake
diff --git a/CMakeLists.txt b/CMakeLists.txt
index acd77f4b623..d3e8a23f9ff 100644
--- a/CMakeLists.txt
+++ b/CMakeLists.txt
@@ -114,16 +114,6 @@ else ()
set(WTF_CPU_UNKNOWN 1)
endif ()
-#---------------------------
-# Make sure SSE2 is present.
-#---------------------------
-if (WTF_CPU_X86)
- include(FindSSE2)
- if (NOT SSE2_SUPPORT_FOUND)
- message(FATAL_ERROR "SSE2 support is required to compile WebKit")
- endif ()
-endif ()
-
# -----------------------------------------------------------------------------
# Determine the operating system
# -----------------------------------------------------------------------------
diff --git a/Source/JavaScriptCore/assembler/MacroAssemblerX86Common.cpp b/Source/JavaScriptCore/assembler/MacroAssemblerX86Common.cpp
index 8c752c0d030..31753589df7 100644
--- a/Source/JavaScriptCore/assembler/MacroAssemblerX86Common.cpp
+++ b/Source/JavaScriptCore/assembler/MacroAssemblerX86Common.cpp
@@ -168,6 +168,11 @@ static_assert(PROBE_OFFSETOF_REG(cpu.fprs, X86Registers::xmm15) == PROBE_CPU_XMM
static_assert(sizeof(Probe::State) == PROBE_SIZE, "Probe::State::size's matches ctiMasmProbeTrampoline");
static_assert((PROBE_EXECUTOR_OFFSET + PTR_SIZE) <= (PROBE_SIZE + OUT_SIZE), "Must have room after ProbeContext to stash the probe handler");
+#if CPU(X86)
+// SSE2 is a hard requirement on x86.
+static_assert(isSSE2Present(), "SSE2 support is required in JavaScriptCore");
+#endif
+
#undef PROBE_OFFSETOF
#if CPU(X86)
@@ -787,6 +792,7 @@ void MacroAssemblerX86Common::collectCPUFeatures()
std::call_once(onceKey, [] {
{
CPUID cpuid = getCPUID(0x1);
+ s_sse2CheckState = (cpuid[3] & (1 << 26)) ? CPUIDCheckState::Set : CPUIDCheckState::Clear;
s_sse4_1CheckState = (cpuid[2] & (1 << 19)) ? CPUIDCheckState::Set : CPUIDCheckState::Clear;
s_sse4_2CheckState = (cpuid[2] & (1 << 20)) ? CPUIDCheckState::Set : CPUIDCheckState::Clear;
s_popcntCheckState = (cpuid[2] & (1 << 23)) ? CPUIDCheckState::Set : CPUIDCheckState::Clear;
@@ -803,6 +809,7 @@ void MacroAssemblerX86Common::collectCPUFeatures()
});
}
+MacroAssemblerX86Common::CPUIDCheckState MacroAssemblerX86Common::s_sse2CheckState = CPUIDCheckState::NotChecked;
MacroAssemblerX86Common::CPUIDCheckState MacroAssemblerX86Common::s_sse4_1CheckState = CPUIDCheckState::NotChecked;
MacroAssemblerX86Common::CPUIDCheckState MacroAssemblerX86Common::s_sse4_2CheckState = CPUIDCheckState::NotChecked;
MacroAssemblerX86Common::CPUIDCheckState MacroAssemblerX86Common::s_avxCheckState = CPUIDCheckState::NotChecked;
diff --git a/Source/JavaScriptCore/assembler/MacroAssemblerX86Common.h b/Source/JavaScriptCore/assembler/MacroAssemblerX86Common.h
index ff097290ef3..097bcb0bb86 100644
--- a/Source/JavaScriptCore/assembler/MacroAssemblerX86Common.h
+++ b/Source/JavaScriptCore/assembler/MacroAssemblerX86Common.h
@@ -4197,11 +4197,41 @@ private:
}
#endif
+#if CPU(X86)
+#if OS(MAC_OS_X)
+
+ // All X86 Macs are guaranteed to support at least SSE2,
+ static bool isSSE2Present()
+ {
+ return true;
+ }
+
+#else // OS(MAC_OS_X)
+ static bool isSSE2Present()
+ {
+ if (s_sse2CheckState == CPUIDCheckState::NotChecked)
+ collectCPUFeatures();
+ return s_sse2CheckState == CPUIDCheckState::Set;
+ }
+
+#endif // OS(MAC_OS_X)
+#elif !defined(NDEBUG) // CPU(X86)
+
+ // On x86-64 we should never be checking for SSE2 in a non-debug build,
+ // but non debug add this method to keep the asserts above happy.
+ static bool isSSE2Present()
+ {
+ return true;
+ }
+
+#endif
+
using CPUID = std::array<unsigned, 4>;
static CPUID getCPUID(unsigned level);
static CPUID getCPUIDEx(unsigned level, unsigned count);
JS_EXPORT_PRIVATE static void collectCPUFeatures();
+ JS_EXPORT_PRIVATE static CPUIDCheckState s_sse2CheckState;
JS_EXPORT_PRIVATE static CPUIDCheckState s_sse4_1CheckState;
JS_EXPORT_PRIVATE static CPUIDCheckState s_sse4_2CheckState;
JS_EXPORT_PRIVATE static CPUIDCheckState s_avxCheckState;
diff --git a/Source/cmake/FindSSE2.cmake b/Source/cmake/FindSSE2.cmake
deleted file mode 100644
index 7a947feadd4..00000000000
--- a/Source/cmake/FindSSE2.cmake
+++ /dev/null
@@ -1,65 +0,0 @@
-#################################
-# Check for the presence of SSE2.
-#
-# Once done, this will define:
-# - SSE2_SUPPORT_FOUND - the system supports (at least) SSE2.
-#
-# Copyright (c) 2014, Pablo Fernandez Alcantarilla, Jesus Nuevo
-# Copyright (c) 2019, Igalia S.L.
-#
-# Redistribution and use in source and binary forms, with or without modification,
-# are permitted provided that the following conditions are met:
-#
-# * Redistributions of source code must retain the above copyright notice,
-# this list of conditions and the following disclaimer.
-#
-# * Redistributions in binary form must reproduce the above copyright notice,
-# this list of conditions and the following disclaimer in the documentation
-# and/or other materials provided with the distribution.
-#
-# * Neither the name of the copyright holders nor the names of its contributors
-# may be used to endorse or promote products derived from this software without
-# specific prior written permission.
-#
-# THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND ANY
-# EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES
-# OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT
-# SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT,
-# INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED
-# TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR
-# BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
-# CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY
-# WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
-
-set(SSE2_SUPPORT_FOUND FALSE)
-
-macro(CHECK_FOR_SSE2)
- include(CheckCXXSourceRuns)
-
- check_cxx_source_runs("
- #include <emmintrin.h>
- int main ()
- {
- __m128d a, b;
- double vals[2] = {0};
- a = _mm_loadu_pd (vals);
- b = _mm_add_pd (a,a);
- _mm_storeu_pd (vals,b);
- return(0);
- }"
- HAVE_SSE2_EXTENSIONS)
-
- if (CMAKE_COMPILER_IS_GNUCC OR CMAKE_COMPILER_IS_GNUCXX OR CMAKE_COMPILER_IS_CLANG)
- if (HAVE_SSE2_EXTENSIONS)
- set(SSE2_SUPPORT_FOUND TRUE)
- endif ()
- elseif (MSVC AND NOT CMAKE_CL_64)
- if (HAVE_SSE2_EXTENSIONS)
- set(SSE2_SUPPORT_FOUND TRUE)
- message(STATUS "Found SSE2 extensions.")
- endif (HAVE_SSE2_EXTENSIONS)
- endif ()
-
-endmacro(CHECK_FOR_SSE2)
-
-CHECK_FOR_SSE2()
--
2.21.0

23
gnu/packages/patchutils.scm
View File

@ -1,7 +1,7 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2014, 2018 Eric Bavier <bavier@member.fsf.org>
;;; Copyright © 2015, 2018 Leo Famulari <leo@famulari.name>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
;;;
;;; This file is part of GNU Guix.
;;;
@ -98,18 +98,14 @@ listing the files modified by a patch.")
(define-public quilt
(package
(name "quilt")
(version "0.65")
(version "0.66")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://savannah/quilt/"
name "-" version ".tar.gz"))
(sha256
(base32
"06b816m2gz9jfif7k9v2hrm7fz76zjg5pavf7hd3ifybwn4cgjzn"))
(patches (search-patches "quilt-test-fix-regex.patch"
"quilt-getopt-second-separator.patch"
"quilt-getopt-nondigit-param.patch"))))
(method url-fetch)
(uri (string-append "mirror://savannah/quilt/"
"quilt-" version ".tar.gz"))
(sha256
(base32 "01vfvk4pqigahx82fhaaffg921ivd3k7rylz1yfvy4zbdyd32jri"))))
(build-system gnu-build-system)
(native-inputs
`(("gettext" ,gnu-gettext)))
@ -248,7 +244,7 @@ GiB).")
(define-public meld
(package
(name "meld")
(version "3.20.0")
(version "3.20.1")
(source
(origin
(method url-fetch)
@ -256,8 +252,7 @@ GiB).")
(version-major+minor version)
"/meld-" version ".tar.xz"))
(sha256
(base32
"11khi1sg02k3b9qdag3r939cwi27cql4kjim7jhxf9ckfhpzwh6b"))))
(base32 "0jdj7kd6vj1mdc16gvrj1kar88b2j5875ajq18fx7cbc9ny46j55"))))
(build-system python-build-system)
(native-inputs
`(("intltool" ,intltool)

126
gnu/packages/perl-check.scm
View File

@ -142,6 +142,30 @@ framework base class. It concentrates on offering reusable data driven
patterns, so that you can write tests with a minimum of code.")
(license perl-license)))
(define-public perl-test-checkdeps
(package
(name "perl-test-checkdeps")
(version "0.010")
(source
(origin
(method url-fetch)
(uri (string-append
"mirror://cpan/authors/id/L/LE/LEONT/Test-CheckDeps-"
version
".tar.gz"))
(sha256
(base32
"1vjinlixxdx6gfcw8y1dw2rla8bfhi8nmgcqr3nffc7kqskcrz36"))))
(build-system perl-build-system)
(propagated-inputs
`(("perl-cpan-meta-check" ,perl-cpan-meta-check)))
(home-page "https://metacpan.org/release/Test-CheckDeps")
(synopsis "Check for presence of dependencies")
(description
"This module provides a test that checks all dependencies have been
installed properly.")
(license perl-license)))
(define-public perl-test-class
(package
(name "perl-test-class")
@ -361,6 +385,30 @@ functions.")
;; license, any version, ..."
(license gpl3+)))
(define-public perl-test-dir
(package
(name "perl-test-dir")
(version "1.16")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://cpan/authors/id/M/MT/MTHURN/"
"Test-Dir-" version ".tar.gz"))
(sha256
(base32
"1hpafgr93jjl6s8spskhdxhgich4cccmaiq99mla5diyj4iv6ckk"))))
(build-system perl-build-system)
(propagated-inputs
`(("perl-pod-coverage" ,perl-pod-coverage)
("perl-test-pod" ,perl-test-pod)
("perl-test-pod-coverage" ,perl-test-pod-coverage)))
(home-page "https://metacpan.org/release/Test-Dir")
(synopsis "Utilities for testing directory attributes")
(description
"This modules provides a collection of test utilities for directory
attributes.")
(license perl-license)))
(define-public perl-test-directory
(package
(name "perl-test-directory")
@ -500,6 +548,58 @@ Test::Exception. It does much less, but should allow greater flexibility in
testing exception-throwing code with about the same amount of typing.")
(license perl-license)))
(define-public perl-test-file
(package
(name "perl-test-file")
(version "1.443")
(source
(origin
(method url-fetch)
(uri (string-append
"mirror://cpan/authors/id/B/BD/BDFOY/Test-File-"
version
".tar.gz"))
(sha256
(base32
"1mdwb3x8d4l24wsymamsnq2c73a637v4q5kmb5xqqz31iymsdd31"))))
(build-system perl-build-system)
(native-inputs
`(("perl-test-utf8" ,perl-test-utf8)))
(home-page "https://metacpan.org/release/Test-File")
(synopsis "Utilities for testing file attributes")
(description
"@code{Test::File} provides a collection of test utilities for file
attributes.")
(license perl-license)))
(define-public perl-test-file-contents
(package
(name "perl-test-file-contents")
(version "0.23")
(source
(origin
(method url-fetch)
(uri (string-append
"mirror://cpan/authors/id/D/DW/DWHEELER/Test-File-Contents-"
version
".tar.gz"))
(sha256
(base32
"0g8zgfyw84181snw7ghahnl9r4lrmlfj7zwi76sv8d0bj7xssvyd"))))
(build-system perl-build-system)
(native-inputs
`(("perl-module-build" ,perl-module-build)))
(propagated-inputs
`(("perl-test-pod" ,perl-test-pod)
("perl-test-pod-coverage" ,perl-test-pod-coverage)
("perl-text-diff" ,perl-text-diff)))
(home-page "https://metacpan.org/release/Test-File-Contents")
(synopsis "Test routines for examining the contents of files")
(description
"@{Test::File::Contents} provides functions for testing the contents of
files.")
(license perl-license)))
(define-public perl-test-file-sharedir-dist
(package
(name "perl-test-file-sharedir-dist")
@ -1275,6 +1375,32 @@ check if a string is valid and not corrupt, whereas the characteristics tests
will check that string has a given set of characteristics.")
(license perl-license)))
(define-public perl-test-version
(package
(name "perl-test-version")
(version "2.09")
(source
(origin
(method url-fetch)
(uri (string-append
"mirror://cpan/authors/id/P/PL/PLICEASE/Test-Version-"
version
".tar.gz"))
(sha256
(base32
"1q1qradaf7r2rb3jhpv01wl8z3bxymkfqrl9gwdhxwx5jwldvqcw"))))
(build-system perl-build-system)
(native-inputs
`(("perl-test-exception" ,perl-test-exception)))
(propagated-inputs
`(("perl-file-find-rule-perl" ,perl-file-find-rule-perl)))
(home-page "https://metacpan.org/release/Test-Version")
(synopsis "Check versions in modules")
(description
"@code{Test::Version} checks to ensure that all modules have a version
defined, and that the version is valid.")
(license artistic2.0)))
(define-public perl-test-warn
(package
(name "perl-test-warn")

57
gnu/packages/perl-web.scm
View File

@ -21,9 +21,11 @@
#:use-module ((guix licenses) #:prefix license:)
#:use-module (gnu packages)
#:use-module (guix packages)
#:use-module (gnu packages perl)
#:use-module (gnu packages perl-check)
#:use-module (guix download)
#:use-module (guix build-system perl))
#:use-module (guix build-system perl)
#:use-module (gnu packages web))
(define-public perl-mojolicious
(package
@ -48,6 +50,33 @@ used are outdated now, the idea behind it is not. Mojolicious is a new
endeavor to implement this idea using modern technologies.")
(license license:artistic2.0)))
(define-public perl-uri-db
(package
(name "perl-uri-db")
(version "0.19")
(source
(origin
(method url-fetch)
(uri (string-append
"mirror://cpan/authors/id/D/DW/DWHEELER/URI-db-"
version
".tar.gz"))
(sha256
(base32
"0n56xxlw7c39pfar0dxckr9mbmp6yrzk53ic0cb24raiykm9v6f4"))))
(build-system perl-build-system)
(native-inputs
`(("perl-module-build" ,perl-module-build)))
(propagated-inputs
`(("perl-uri" ,perl-uri)
("perl-uri-nested" ,perl-uri-nested)))
(home-page "https://metacpan.org/release/URI-db")
(synopsis "Handle database URIs")
(description
"This module defines a format for database URIs, and provides a @{URI}
class to handle these.")
(license license:perl-license)))
(define-public perl-uri-escape
(package
(name "perl-uri-escape")
@ -70,3 +99,29 @@ percent-decode URI strings as defined by RFC 3986. Percent-encoding URI's is
informally called URI escaping. This is the terminology used by this module,
which predates the formalization of the terms by the RFC by several years.")
(license license:perl-license)))
(define-public perl-uri-nested
(package
(name "perl-uri-nested")
(version "0.10")
(source
(origin
(method url-fetch)
(uri (string-append
"mirror://cpan/authors/id/D/DW/DWHEELER/URI-Nested-"
version
".tar.gz"))
(sha256
(base32
"1bzg6f11m8wfnmycflvp858rs99xknsx8hkip0xcdfjzlqwi75z1"))))
(build-system perl-build-system)
(native-inputs
`(("perl-module-build" ,perl-module-build)))
(propagated-inputs
`(("perl-uri" ,perl-uri)))
(home-page "https://metacpan.org/release/URI-Nested")
(synopsis "Nested URIs")
(description
"@code{URI::Nested} provides support for nested URIs, where the scheme is
a prefix, and the remainder of the URI is another URI.")
(license license:perl-license)))

250
gnu/packages/perl.scm
View File

@ -49,6 +49,7 @@
#:use-module (gnu packages base)
#:use-module (gnu packages compression)
#:use-module (gnu packages freedesktop)
#:use-module (gnu packages less)
#:use-module (gnu packages perl-check)
#:use-module (gnu packages perl-compression)
#:use-module (gnu packages perl-web)
@ -1435,6 +1436,33 @@ some enhancements such as here-documents, C-style comments, and multiline
options.")
(license (package-license perl))))
(define-public perl-config-gitlike
(package
(name "perl-config-gitlike")
(version "1.17")
(source
(origin
(method url-fetch)
(uri (string-append
"mirror://cpan/authors/id/A/AL/ALEXMV/Config-GitLike-"
version
".tar.gz"))
(sha256
(base32
"0kp57na9mk6yni693h2fwap6l1ndbcj97l4860r9vkzx2jw0fjk7"))))
(build-system perl-build-system)
(native-inputs
`(("perl-test-exception" ,perl-test-exception)))
(propagated-inputs
`(("perl-moo" ,perl-moo)
("perl-moox-types-mooselike" ,perl-moox-types-mooselike)))
(home-page "https://metacpan.org/release/Config-GitLike")
(synopsis "Parse Git style configuration files")
(description
"This module handles parsing, modifying and creating configuration files
of the style used by the Git version control system.")
(license perl-license)))
(define-public perl-config-ini
(package
(name "perl-config-ini")
@ -1530,6 +1558,28 @@ data.")
@file{Changes} files that conform to a common specification.")
(license perl-license)))
(define-public perl-cpan-distnameinfo
(package
(name "perl-cpan-distnameinfo")
(version "0.12")
(source
(origin
(method url-fetch)
(uri (string-append
"mirror://cpan/authors/id/G/GB/GBARR/CPAN-DistnameInfo-"
version
".tar.gz"))
(sha256
(base32
"0d94kx596w7k328cvq4y96z1gz12hdhn3z1mklkbrb7fyzlzn91g"))))
(build-system perl-build-system)
(home-page "https://metacpan.org/release/CPAN-DistnameInfo")
(synopsis "Extract the name and version from a distribution filename")
(description
"@code{CPAN::DistnameInfo} uses heuristics to extract the distribution
name and version from filenames.")
(license perl-license)))
(define-public perl-cpan-meta-check
(package
(name "perl-cpan-meta-check")
@ -2738,6 +2788,26 @@ equivalent of \"$@{^GLOBAL_PHASE@} eq 'DESTRUCT'\" for older perls.")
files/modules are installed or not).")
(license (package-license perl))))
(define-public perl-devel-leak
(package
(name "perl-devel-leak")
(version "0.03")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://cpan/authors/id/N/NI/NI-S/"
"Devel-Leak-" version ".tar.gz"))
(sha256
(base32
"0lkj2xwc3lhxv7scl43r8kfmls4am0b98sqf5vmf7d72257w6hkg"))))
(build-system perl-build-system)
(home-page "https://metacpan.org/release/Devel-Leak")
(synopsis "Utility for looking for perl objects that are not reclaimed")
(description
"This module provides a basic way to discover if a piece of perl code is
allocating perl data and not releasing them again.")
(license perl-license)))
(define-public perl-devel-lexalias
(package
(name "perl-devel-lexalias")
@ -3803,6 +3873,31 @@ functionality; it returns a list of file names that match the given pattern.
For instance, it supports the @code{**/*.pm} form.")
(license (package-license perl))))
(define-public perl-filesys-notify-simple
(package
(name "perl-filesys-notify-simple")
(version "0.13")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://cpan/authors/id/M/MI/MIYAGAWA/"
"Filesys-Notify-Simple-" version ".tar.gz"))
(sha256
(base32
"18jv96k1pf8wqf4vn2ahs7dv44lc9cyqj0bja9z17qici3dx7qxd"))))
(build-system perl-build-system)
(native-inputs
`(("perl-test-sharedfork" ,perl-test-sharedfork)))
(home-page "https://metacpan.org/release/Filesys-Notify-Simple")
(synopsis "Simple and dumb file system watcher")
(description
"Filesys::Notify::Simple is a simple but unified interface to get
notifications of changes to a given filesystem path. It utilizes inotify2 on
Linux, fsevents on OS X, kqueue on FreeBSD and FindFirstChangeNotification on
Windows if they're installed, with a fallback to the full directory scan if
they're not available.")
(license perl-license)))
(define-public perl-getopt-long
(package
(name "perl-getopt-long")
@ -4212,6 +4307,41 @@ easier to develop interactive applications: is_interactive(), interactive(),
and busy().")
(license (package-license perl))))
(define-public perl-io-pager
(package
(name "perl-io-pager")
(version "0.4")
(source
(origin
(method url-fetch)
(uri (string-append
"mirror://cpan/authors/id/J/JP/JPIERCE/IO-Pager-"
version
"0.tgz"))
(sha256
(base32
"1vzdypsr7vkj8nnda9ccrksci6pqj5awwmi89l7x3mbpq36gad87"))))
(build-system perl-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch-less
(lambda _
(substitute* "lib/IO/Pager.pm"
(("/usr/local/bin/less', '/usr/bin/less")
(which "less")))
#t)))))
(propagated-inputs
`(("perl-file-which" ,perl-file-which)))
(inputs
`(("less" ,less)))
(home-page "https://metacpan.org/release/IO-Pager")
(synopsis "Select a pager and pipe text to it")
(description
"@code{IO::Pager} can be used to locate an available pager and use it to
display output if a TTY is in use.")
(license (package-license perl))))
(define-public perl-io-string
(package
(name "perl-io-string")
@ -7539,6 +7669,32 @@ expanding standard C/Unix-style backslash escapes like \n and \t, wrapping and
removing double-quotes, and truncating to fit within a desired length.")
(license (package-license perl))))
(define-public perl-string-formatter
(package
(name "perl-string-formatter")
(version "0.102084")
(source
(origin
(method url-fetch)
(uri (string-append
"mirror://cpan/authors/id/R/RJ/RJBS/String-Formatter-"
version
".tar.gz"))
(sha256
(base32
"0mlwm0rirv46gj4h072q8gdync5zxxsxy8p028gdyrhczl942dc3"))))
(build-system perl-build-system)
(propagated-inputs
`(("perl-params-util" ,perl-params-util)
("perl-sub-exporter" ,perl-sub-exporter)))
(home-page "https://metacpan.org/release/String-Formatter")
(synopsis "Build your own sprintf-like functions")
(description
"@code{String::Formatter} is a tool for building sprintf-like formatting
routines. It supports named or positional formatting, custom conversions,
fixed string interpolation, and simple width-matching.")
(license gpl2)))
(define-public perl-string-rewriteprefix
(package
(name "perl-string-rewriteprefix")
@ -7560,6 +7716,28 @@ removing double-quotes, and truncating to fit within a desired length.")
known prefixes.")
(license (package-license perl))))
(define-public perl-string-shellquote
(package
(name "perl-string-shellquote")
(version "1.04")
(source
(origin
(method url-fetch)
(uri (string-append
"mirror://cpan/authors/id/R/RO/ROSCH/String-ShellQuote-"
version
".tar.gz"))
(sha256
(base32
"0dfxhr6hxc2majkkrm0qbx3qcbykzpphbj2ms93dc86f7183c1p6"))))
(build-system perl-build-system)
(home-page "https://metacpan.org/release/String-ShellQuote")
(synopsis "Quote strings for passing through a shell")
(description
"@code{shell-quote} lets you pass arbitrary strings through the shell so
that they won't be changed.")
(license (package-license perl))))
(define-public perl-string-print
(package
(name "perl-string-print")
@ -7893,6 +8071,28 @@ determining their type and clock speed.")
of a system.")
(license (package-license perl))))
(define-public perl-sys-syscall
(package
(name "perl-sys-syscall")
(version "0.25")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://cpan/authors/id/B/BR/BRADFITZ/"
"Sys-Syscall-" version ".tar.gz"))
(sha256
(base32
"1r8k4q04dhs191zgdfgiagvbra770hx0bm6x24jsykxn0c6ghi8y"))))
(build-system perl-build-system)
(home-page "https://metacpan.org/release/Sys-Syscall")
(synopsis
"Access system calls that Perl doesn't normally provide access to")
(description
"Sys::Syscall allows one to use epoll and sendfile system calls from
Perl. Support is mostly Linux-only for now, but other syscalls/OSes are
planned for the future.")
(license perl-license)))
(define-public perl-task-weaken
(package
(name "perl-task-weaken")
@ -7932,7 +8132,7 @@ error encouraging the user to seek support.")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://cpan/authors/id/A/AB/ABW/"
(uri (string-append "mirror://cpan/authors/id/A/AT/ATOOMIC/"
"Template-Toolkit-" version ".tar.gz"))
(sha256
(base32
@ -7971,6 +8171,32 @@ documents: HTML, XML, POD, PostScript, LaTeX, and so on.")
processing in Perl code.")
(license (list gpl3 artistic2.0))))
(define-public perl-template-tiny
(package
(name "perl-template-tiny")
(version "1.12")
(source
(origin
(method url-fetch)
(uri (string-append
"mirror://cpan/authors/id/A/AD/ADAMK/Template-Tiny-"
version
".tar.gz"))
(sha256
(base32
"0jhadxbc8rzbk2v8qvjrbhnvfp0m56iqar6d4nvxyl8bccn0cgh7"))))
(build-system perl-build-system)
(home-page "https://metacpan.org/release/Template-Tiny")
(synopsis "Template Toolkit reimplemented in as little code as possible")
(description
"@code{Template::Tiny} is a reimplementation of a subset of the
functionality from Template Toolkit in as few lines of code as possible.
It is intended for use in light-usage, low-memory, or low-cpu templating
situations, where you may need to upgrade to the full feature set in the
future, or if you want the retain the familiarity of TT-style templates.")
(license perl-license)))
(define-public perl-term-encoding
(package
(name "perl-term-encoding")
@ -8538,6 +8764,28 @@ can also be set to any arbitrary supplied order. The familiar perl array
operations can also be performed on the IxHash.")
(license (package-license perl))))
(define-public perl-tie-handle-offset
(package
(name "perl-tie-handle-offset")
(version "0.004")
(source
(origin
(method url-fetch)
(uri (string-append
"mirror://cpan/authors/id/D/DA/DAGOLDEN/Tie-Handle-Offset-"
version
".tar.gz"))
(sha256
(base32
"17m8s8314wi4g0wasdxk15rf12vzsgzmcbr598jam5f6bl2kk7zf"))))
(build-system perl-build-system)
(home-page "https://metacpan.org/release/Tie-Handle-Offset")
(synopsis "Special file handle that hides the beginning of a file")
(description
"This modules provides a file handle that hides the beginning of a file,
by modifying the @code{seek()} and @code{tell()} calls.")
(license asl2.0)))
(define-public perl-tie-toobject
(package
(name "perl-tie-toobject")

4
gnu/packages/photo.scm
View File

@ -360,7 +360,7 @@ photographic equipment.")
(define-public darktable
(package
(name "darktable")
(version "2.6.1")
(version "2.6.2")
(source
(origin
(method url-fetch)
@ -368,7 +368,7 @@ photographic equipment.")
"https://github.com/darktable-org/darktable/releases/"
"download/release-" version "/darktable-" version ".tar.xz"))
(sha256
(base32 "09ihbj0602spgc5lfbskf9am38n03gam2r8v3kj4dyfgxqr37ib3"))))
(base32 "0igvgyd042j7hm4y8fcm6dc1qqjs4d1r7y6f0pzpa0x416xyzfcw"))))
(build-system cmake-build-system)
(arguments
`(#:tests? #f ; there are no tests

13
gnu/packages/plotutils.scm
View File

@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2013, 2014, 2015, 2016, 2017, 2018 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2013, 2014, 2015, 2016, 2017, 2018, 2019 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2015 Eric Bavier <bavier@member.fsf.org>
;;; Copyright © 2016, 2017, 2019 Nicolas Goaziou <mail@nicolasgoaziou.fr>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
@ -93,7 +93,16 @@ scientific data.")
"guile-charting-" version ".tar.gz"))
(sha256
(base32
"0w5qiyv9v0ip5li22x762bm48g8xnw281w66iyw094zdw611pb2m"))))
"0w5qiyv9v0ip5li22x762bm48g8xnw281w66iyw094zdw611pb2m"))
(modules '((guix build utils)))
(snippet
'(begin
;; By default, .go files would be installed to
;; $libdir/…/ccache instead of $libdir/…/site-ccache. Fix
;; that.
(substitute* (find-files "." "^Makefile\\.in$")
(("/ccache") "/site-ccache"))
#t))))
(build-system gnu-build-system)
(native-inputs `(("pkg-config" ,pkg-config)))
(inputs `(("guile" ,guile-2.2)))

80
gnu/packages/poedit.scm 100644
View File

@ -0,0 +1,80 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2019 Julien Lepiller <julien@lepiller.eu>
;;;
;;; This file is part of GNU Guix.
;;;
;;; GNU Guix is free software; you can redistribute it and/or modify it
;;; under the terms of the GNU General Public License as published by
;;; the Free Software Foundation; either version 3 of the License, or (at
;;; your option) any later version.
;;;
;;; GNU Guix is distributed in the hope that it will be useful, but
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;;; GNU General Public License for more details.
;;;
;;; You should have received a copy of the GNU General Public License
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
(define-module (gnu packages poedit)
#:use-module ((guix licenses) #:prefix license:)
#:use-module (gnu packages)
#:use-module (guix packages)
#:use-module (guix git-download)
#:use-module (guix utils)
#:use-module (guix build-system gnu)
#:use-module (gnu packages autotools)
#:use-module (gnu packages boost)
#:use-module (gnu packages enchant)
#:use-module (gnu packages gettext)
#:use-module (gnu packages gtk)
#:use-module (gnu packages icu4c)
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages rdf)
#:use-module (gnu packages wxwidgets)
#:use-module (gnu packages xml))
(define-public poedit
(package
(name "poedit")
(version "2.2.1")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/vslavik/poedit")
(commit (string-append "v" version "-oss"))))
(file-name (git-file-name name version))
(sha256
(base32
"1fxzmry4b23l90j03jdyvd4jprdpy4xcnhw7xrmmfnlbh2abf9x7"))
(modules '((guix build utils)))
(snippet
'(begin
(delete-file-recursively "deps")
#t))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags
(list (string-append "--with-boost-libdir="
(assoc-ref %build-inputs "boost")
"/lib"))))
(native-inputs
`(("autoconf" ,autoconf)
("automake" ,automake)
("gettext-minimal" ,gettext-minimal)
("pkg-config" ,pkg-config)))
(inputs
`(("boost" ,boost)
("enchant" ,enchant)
("gtk+" ,gtk+)
("gtkspell3" ,gtkspell3)
("icu4c" ,icu4c)
("lucene++" ,lucene++)
("pugixml" ,pugixml)
("wxwidgets" ,wxwidgets)))
(home-page "https://poedit.net/")
(synopsis "Gettext catalog editing tool")
(description "Poedit is a GUI frontend to the GNU gettext utilities and
a catalog editor/source code parser. It helps with translating applications
into other languages.")
(license license:expat)))

6
gnu/packages/pretty-print.scm
View File

@ -3,7 +3,7 @@
;;; Copyright © 2016 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2017 Marius Bakke <mbakke@fastmail.com>
;;; Copyright © 2017 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2017, 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2019 Meiyo Peng <meiyo@riseup.net>
;;;
;;; This file is part of GNU Guix.
@ -241,14 +241,14 @@ seen in a terminal.")
(define-public highlight
(package
(name "highlight")
(version "3.49")
(version "3.50")
(source
(origin
(method url-fetch)
(uri (string-append "http://www.andre-simon.de/zip/highlight-"
version ".tar.bz2"))
(sha256
(base32 "1zlhmlq5fnsxxmm04qfchhl4w2iw5fa6sn81c34q6k2m1m77g6aj"))))
(base32 "0frcq12zy3dqfhwwzylm10ydp7zp51w9jlijm23zvx09daslg1bl"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; no tests

123
gnu/packages/python-xyz.scm
View File

@ -3349,24 +3349,16 @@ color scales, and color space conversion easy. It has support for:
(define-public python-pygit2
(package
(name "python-pygit2")
(version "0.27.4")
(version "0.28.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pygit2" version))
(sha256
(base32
"15c1mhwwjc7nr8hn5gm21hcfhw61jmwb0vngpjhlm3y5565wg2pz"))))
(base32 "0lngsaz029d4fjcwhl17pr59nh9gwl6hwfin36nph60fgsmfdg3d"))))
(build-system python-build-system)
(arguments
'(#:tests? #f; tests don't run correctly in our environment
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'fix-dependency-versioning
(lambda _
(substitute* "setup.py"
(("<") "<="))
#t)))))
'(#:tests? #f)) ; tests don't run correctly in our environment
(propagated-inputs
`(("python-six" ,python-six)
("python-cffi" ,python-cffi)
@ -4453,13 +4445,13 @@ memoizing PEG/Packrat parser in Python.")
(version "0.13.0")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/pygridtools/gridmap/archive/v"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/pygridtools/gridmap.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1gzjg2k6f14i1msm2b0ax8d9ds1hvk6qd5nlaivg8m4cxqp4cp1x"))))
(base32 "1478lbwsr1w24cii2x01m2910fvh8r43ghnb78nc972a96hqiknm"))))
(build-system python-build-system)
(arguments
'(#:tests? #f)) ; FIXME: Requires python-cherrypy.
@ -4484,13 +4476,13 @@ cluster without needing to write any wrapper code yourself.")
(version "1.0.1")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/nickstenning/honcho/archive/v"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/nickstenning/honcho.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0zizn61n5z5hq421hkypk9pw8s6fpxw30f4hsg7k4ivwzy3gjw9j"))))
(base32 "11bd87474qpif20xdcn0ra1idj5k16ka51i658wfpxwc6nzsn92b"))))
(build-system python-build-system)
(native-inputs
`(("python-pytest" ,python-pytest)
@ -6747,14 +6739,15 @@ Python Package Index (PyPI).")
(name "python-tlsh")
(version "3.4.5")
(home-page "https://github.com/trendmicro/tlsh")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/trendmicro/tlsh/archive/v"
version ".tar.gz"))
(sha256
(base32
"1x1vahd4zg5kpyr9h9hs3fvh460p25rjy4cclwdnbbw8x3vc30q3"))
(file-name (string-append name "-" version ".tar.gz"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/trendmicro/tlsh.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1ydliir308xn4ywy705mmsh7863ldlixdvpqwdhbipzq9vfpmvll"))))
(build-system cmake-build-system)
(arguments
'(#:out-of-source? #f
@ -10235,20 +10228,21 @@ discovery, monitoring and configuration.")
(name "python-schematics")
(version "1.1.1")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/schematics/schematics/archive/v" version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"19v1i69bf3bzarfxmbv0v6ivpcn758x3shvbiy9l2hy0lvqwnp6l"))))
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/schematics/schematics.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0xdqskycznqc7mfp60bhw1zq8wx7yx1dvmbq3brnm1dx3xnqa0zd"))))
(build-system python-build-system)
(propagated-inputs
`(("python-six" ,python-six)))
(arguments
`(#:tests? #f)) ; requires a bunch of not very nice packages with fixed
; version requirements (eg python-coveralls)
;; The tests require a bunch of not very nice packages with fixed
;; version requirements (e.g. python-coveralls).
`(#:tests? #f))
(home-page "https://github.com/schematics/schematics")
(synopsis "Python Data Structures for Humans")
(description "Python Data Structures for Humans.")
@ -12585,13 +12579,13 @@ Swagger 2.0).")
(version "0.6.3")
(source
(origin
(method url-fetch)
(uri (string-append "https://github.com/rochacbruno/flasgger/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/rochacbruno/flasgger.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"1gqzlm0rb55fdpsy5ipkganlx9cnpi454fqyycr03jm22zql14ay"))))
(base32 "0yydxsyjnc0clbrjqb1n7587l6cdqvwdagwxk5hkx01qwdfbkvpn"))))
(build-system python-build-system)
(arguments
`(#:phases
@ -13097,13 +13091,13 @@ executed more than a given number of times during a given period.")
(version "0.3")
(source
(origin
(method url-fetch)
(uri (string-append "https://github.com/kovidgoyal/dukpy/archive/v"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/kovidgoyal/dukpy.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0pj39rfwlzivqm5hkrsza7gssg6ggpxlq5ivc8f3h7x5pfgc6y6c"))))
(base32 "13h21nqzasv4zj32xs61brmc106pr2cx243672crcmwxxnjgaxls"))))
(build-system python-build-system)
(home-page "https://github.com/kovidgoyal/dukpy")
(synopsis "Run JavaScript in python")
@ -14170,16 +14164,15 @@ manager compatible with @code{asyncio}.")
(package
(name "python-glob2")
(version "0.6")
(source (origin
(method url-fetch)
(uri (string-append
"https://github.com/miracle2k/python-glob2/archive/"
version
".tar.gz"))
(sha256
(base32
"0ja168f0dz4kbz4m06dm0rd3acaypk6hjx2km541pw22y9s40mag"))
(file-name (string-append name "-" version ".tar.gz"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/miracle2k/python-glob2.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "1lm1xz3k3l0k1c5bcp9hlzmi3gp5j8dl1k3xhpiq5mnm0xq6n163"))))
(build-system python-build-system)
(home-page "https://github.com/miracle2k/python-glob2/")
(synopsis "Extended Version of the python buildin glob module")
@ -14863,14 +14856,14 @@ append on old values. Partd excels at shuffling operations.")
(define-public python-dask
(package
(name "python-dask")
(version "1.1.4")
(version "1.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "dask" version))
(sha256
(base32
"1hrnfz4pzawikz9b622vjz2500n7hs25nz9msy1k8l4g7l2kr6ky"))))
"1y0dqcp72ixwblgway0jpvfirlxfcmwrjiivdq96firj1hw127sd"))))
(build-system python-build-system)
;; A single test out of 5000+ fails. This test is marked as xfail when
;; pytest-xdist is used.

34
gnu/packages/rdf.scm
View File

@ -2,6 +2,7 @@
;;; Copyright © 2013, 2014, 2015 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2015, 2016, 2018 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2019 Julien Lepiller <julien@lepiller.eu>
;;;
;;; This file is part of GNU Guix.
;;;
@ -20,7 +21,7 @@
(define-module (gnu packages rdf)
#:use-module ((guix licenses)
#:select (non-copyleft isc gpl2 lgpl2.1 lgpl2.1+))
#:select (non-copyleft asl2.0 isc gpl2 lgpl2.1 lgpl2.1+ lgpl3+))
#:use-module (guix packages)
#:use-module (guix git-download)
#:use-module (guix download)
@ -119,6 +120,37 @@ full-featured indexing and searching API. It is a port of the very popular
Java Lucene text search engine API to C++.")
(license lgpl2.1)))
(define-public lucene++
(package
(name "lucene++")
(version "3.0.7")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/luceneplusplus/LucenePlusPlus")
(commit (string-append "rel_" version))))
(file-name (git-file-name name version))
(sha256
(base32
"06b37fly6l27zc6kbm93f6khfsv61w792j8xihfagpcm9cfz2zi1"))))
(build-system cmake-build-system)
(arguments
`(#:configure-flags
;; CXX_FLAGS suggested in a closed issue on github:
;; https://github.com/luceneplusplus/LucenePlusPlus/issues/100
(list "-Wno-dev" "-DCMAKE_CXX_FLAGS=-DBOOST_VARIANT_USE_RELAXED_GET_BY_DEFAULT"
;; Install in lib64 break rpath
"-DCMAKE_INSTALL_LIBDIR:PATH=lib")))
(native-inputs
`(("pkg-config" ,pkg-config)))
(inputs
`(("boost" ,boost)))
(home-page "https://github.com/luceneplusplus/LucenePlusPlus")
(synopsis "Text search engine")
(description "Lucene++ is an up to date C++ port of the popular Java
Lucene library, a high-performance, full-featured text search engine.")
(license (list asl2.0 lgpl3+)))); either asl or lgpl.
(define-public lrdf
(package
(name "lrdf")

28
gnu/packages/ruby.scm
View File

@ -2986,12 +2986,13 @@ with processes on remote servers, via SSH2.")
(version "1.2.2.rc2")
(source
(origin
(method url-fetch)
(uri (string-append "https://github.com/net-ssh/net-scp/archive/v"
version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/net-ssh/net-scp.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0xyf17mhgvyz54xjj9ria4wnq3x62bhmkfgzqv8jwiip2bplv1nk"))))
(base32 "1nyn17sy71fn7zs3y6wbgcn35318c10flqgc0582409095x4h0sx"))))
(build-system ruby-build-system)
(native-inputs
`(("bundler" ,bundler)
@ -7679,14 +7680,15 @@ strings or files.")
(package
(name "ruby-sass-spec")
(version "3.5.4")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/sass/sass-spec/archive/v"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"0nx8lp7c9qa58w489crgqa3c489xsyarn1a8h4np9mwwfqm1h3rr"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/sass/sass-spec.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1zsw66830w0xlc7kxz6fm4b5nyb44vdsdgm9mgy06s5aixx83pwr"))))
(build-system ruby-build-system)
(propagated-inputs
`(("ruby-command-line-reporter-3" ,ruby-command-line-reporter-3)

53
gnu/packages/rust.scm
View File

@ -726,6 +726,16 @@ jemalloc = \"" jemalloc "/lib/libjemalloc_pic.a" "\"
`(modify-phases ,phases
;; binaryen was replaced with LLD project from LLVM
(delete 'dont-build-native)
(replace 'check
(lambda* _
;; Enable parallel execution.
(let ((parallel-job-spec
(string-append "-j" (number->string
(min 4
(parallel-job-count))))))
(invoke "./x.py" parallel-job-spec "test" "-vv")
(invoke "./x.py" parallel-job-spec "test"
"src/tools/cargo"))))
(replace 'remove-unsupported-tests
(lambda* _
;; Our ld-wrapper cannot process non-UTF8 bytes in LIBRARY_PATH.
@ -930,7 +940,7 @@ jemalloc = \"" jemalloc "/lib/libjemalloc_pic.a" "\"
(("```rust") "```rust,no_run"))
#t)))))))))
(define-public rust
(define-public rust-1.32
(let ((base-rust
(rust-bootstrapped-package rust-1.31 "1.32.0"
"0ji2l9xv53y27xy72qagggvq47gayr5lcv2jwvmfirx029vlqnac"
@ -982,3 +992,44 @@ jemalloc = \"" jemalloc "/lib/libjemalloc_pic.a" "\"
;; Remove no longer relevant steps
(delete 'remove-flaky-test)
(delete 'patch-aarch64-test))))))))
(define-public rust-1.33
(let ((base-rust
(rust-bootstrapped-package rust-1.32 "1.33.0"
"152x91mg7bz4ygligwjb05fgm1blwy2i70s2j03zc9jiwvbsh0as"
#:patches '())))
(package
(inherit base-rust)
(inputs
;; Upgrade to jemalloc@5.1.0
(alist-replace "jemalloc" (list jemalloc)
(package-inputs base-rust)))
(arguments
(substitute-keyword-arguments (package-arguments base-rust)
((#:phases phases)
`(modify-phases ,phases
(delete 'ignore-cargo-package-tests)
(add-after 'configure 'configure-test-threads
;; Several rustc and cargo tests will fail if run on one core
;; https://github.com/rust-lang/rust/issues/59122
;; https://github.com/rust-lang/cargo/issues/6746
;; https://github.com/rust-lang/rust/issues/58907
(lambda* (#:key inputs #:allow-other-keys)
(setenv "RUST_TEST_THREADS" "2")
#t)))))))))
(define-public rust
(let ((base-rust
(rust-bootstrapped-package rust-1.33 "1.34.0"
"0n8z1wngkxab1rvixqg6w8b727hzpnm9wp9h8iy3mpbrzp7mmj3s"
#:patches '())))
(package
(inherit base-rust)
(source
(origin
(inherit (package-source base-rust))
(snippet '(begin
(delete-file-recursively "src/llvm-emscripten")
(delete-file-recursively "src/llvm-project")
(delete-file-recursively "vendor/jemalloc-sys/jemalloc")
#t)))))))

15
gnu/packages/samba.scm
View File

@ -5,7 +5,7 @@
;;; Copyright © 2016 Adonay "adfeno" Felipe Nogueira <https://libreplanet.org/wiki/User:Adfeno> <adfeno@openmailbox.org>
;;; Copyright © 2017 Thomas Danckaert <post@thomasdanckaert.be>
;;; Copyright © 2017, 2018 Marius Bakke <mbakke@fastmail.com>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2019 Rutger Helling <rhelling@mykolab.com>
;;;
@ -56,14 +56,14 @@
(define-public cifs-utils
(package
(name "cifs-utils")
(version "6.8")
(version "6.9")
(source
(origin
(method url-fetch)
(uri (string-append "https://download.samba.org/pub/linux-cifs/"
name "/" name "-" version ".tar.bz2"))
"cifs-utils/cifs-utils-" version ".tar.bz2"))
(sha256 (base32
"0ygz3pagjpaj5ky11hzh4byyymb7fpmqiqkprn11zwj31h2zdlg7"))))
"175cp509wn1zv8p8mv37hkf6sxiskrsxdnq22mhlsg61jazz3n0q"))))
(build-system gnu-build-system)
(native-inputs
`(("autoconf" ,autoconf)
@ -80,7 +80,8 @@
`(#:phases
(modify-phases %standard-phases
(add-before 'configure 'set-root-sbin
(lambda _ ; Don't try to install in "/sbin".
(lambda _
;; Don't try to install into "/sbin".
(setenv "ROOTSBINDIR"
(string-append (assoc-ref %outputs "out") "/sbin"))
#t)))))
@ -152,14 +153,14 @@ anywhere.")
(define-public samba
(package
(name "samba")
(version "4.10.1")
(version "4.10.2")
(source (origin
(method url-fetch)
(uri (string-append "https://download.samba.org/pub/samba/stable/"
"samba-" version ".tar.gz"))
(sha256
(base32
"0kf5v65xgz7z18ggj1k46yy5g5dy76k7ni04s79kalzqqs25scd7"))))
"112yizx9cpjhi8c7mh9znqg0c9dkj3383hwr8dhgpykl3g2zv347"))))
(build-system gnu-build-system)
(arguments
`(#:phases

28
gnu/packages/search.scm
View File

@ -23,11 +23,12 @@
(define-module (gnu packages search)
#:use-module ((guix licenses)
#:select (gpl2 gpl2+ gpl3+ lgpl2.1+ bsd-3 x11))
#:select (gpl2 gpl2+ gpl3+ lgpl2.1+ bsd-3 x11 perl-license))
#:use-module (guix packages)
#:use-module (guix download)
#:use-module (guix utils)
#:use-module (guix build-system gnu)
#:use-module (guix build-system perl)
#:use-module (guix build-system python)
#:use-module (gnu packages)
#:use-module (gnu packages compression)
@ -110,6 +111,31 @@ rich set of boolean query operators.")
(synopsis "Python bindings for the Xapian search engine library")
(license gpl2+)))
(define-public perl-search-xapian
(package
(name "perl-search-xapian")
(version "1.2.25.2")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://cpan/authors/id/O/OL/OLLY/"
"Search-Xapian-" version ".tar.gz"))
(sha256
(base32
"0hpa8gi38j0ibq8af6dy69lm1bl5jnq76nsa69dbrzbr88l5m594"))))
(build-system perl-build-system)
(native-inputs
`(("perl-devel-leak" ,perl-devel-leak)))
(inputs
`(("xapian" ,xapian)))
(home-page "https://metacpan.org/release/Search-Xapian")
(synopsis "Perl XS frontend to the Xapian C++ search library")
(description
"Search::Xapian wraps most methods of most Xapian classes. The missing
classes and methods should be added in the future. It also provides a
simplified, more 'perlish' interface to some common operations.")
(license perl-license)))
(define-public libtocc
(package
(name "libtocc")

4
gnu/packages/security-token.scm
View File

@ -312,7 +312,7 @@ and other operations. It includes a library and a command-line tool.")
(define-public yubikey-personalization
(package
(name "yubikey-personalization")
(version "1.19.0")
(version "1.19.3")
(source (origin
(method url-fetch)
(uri (string-append
@ -320,7 +320,7 @@ and other operations. It includes a library and a command-line tool.")
"/Releases/ykpers-" version ".tar.gz"))
(sha256
(base32
"104lc0nnqdr365fa7c4vrq67rxp1dp8idndsh9jlhnj9dnhszj1b"))))
"0jhvnavjrpwzmmjcw486df5s48j53njqgyz36yz3dskbaz3kwlfr"))))
(build-system gnu-build-system)
(arguments
'(#:configure-flags (list (string-append "--with-udevrulesdir="

23
gnu/packages/spice.scm
View File

@ -117,7 +117,7 @@ which allows users to view a desktop computing environment.")
(define-public spice-gtk
(package
(name "spice-gtk")
(version "0.35")
(version "0.36")
(source (origin
(method url-fetch)
(uri (string-append
@ -125,7 +125,7 @@ which allows users to view a desktop computing environment.")
"spice-gtk-" version ".tar.bz2"))
(sha256
(base32
"11lymg467gvj5ys8k22ihnfbxjn4x34ygyzirpg2nphjwlyhgrml"))))
"1kfpixfdmxs9wn3id48gc9bvfrgxz935y3wpykf40bgi9mcc69ki"))))
(build-system gnu-build-system)
(propagated-inputs
`(("gstreamer" ,gstreamer)
@ -134,20 +134,23 @@ which allows users to view a desktop computing environment.")
("gst-plugins-good" ,gst-plugins-good)
("gst-plugins-bad" ,gst-plugins-bad)
("gst-plugins-ugly" ,gst-plugins-ugly)
("spice-protocol" ,spice-protocol)))
("spice-protocol" ,spice-protocol)
;; These are required by the pkg-config files.
("gtk+" ,gtk+)
("pixman" ,pixman)
("openssl" ,openssl)))
(inputs
`(("glib-networking" ,glib-networking)
("gobject-introspection" ,gobject-introspection)
("gtk+" ,gtk+)
("json-glib" ,json-glib)
("libepoxy" ,libepoxy)
("libjpeg" ,libjpeg)
("libxcb" ,libxcb)
("lz4" ,lz4)
("mesa" ,mesa)
("pixman" ,pixman)
("pulseaudio" ,pulseaudio)
("python" ,python)
("openssl" ,openssl)
("opus" ,opus)
("usbredir" ,usbredir)))
(native-inputs
@ -162,6 +165,13 @@ which allows users to view a desktop computing environment.")
"--enable-introspection")
#:phases
(modify-phases %standard-phases
(add-before 'check 'disable-session-test
(lambda _
;; XXX: Disable session tests, because they require USB support,
;; which is not available in the build container.
(substitute* "tests/Makefile"
(("test-session\\$\\(EXEEXT\\) ") ""))
#t))
(add-after
'install 'wrap-spicy
(lambda* (#:key inputs outputs #:allow-other-keys)
@ -291,7 +301,6 @@ resolution scaling on graphical console window resize.")
`(("gtk+" ,gtk+)
("libcap" ,libcap)
("libxml2" ,libxml2)
("openssl" ,openssl)
("spice-gtk" ,spice-gtk)))
(native-inputs
`(("glib:bin" ,glib "bin")

44
gnu/packages/statistics.scm
View File

@ -570,14 +570,14 @@ and operations on them using LAPACK and SuiteSparse.")
(define-public r-nlme
(package
(name "r-nlme")
(version "3.1-137")
(version "3.1-139")
(source
(origin
(method url-fetch)
(uri (cran-uri "nlme" version))
(sha256
(base32
"11vyxxc0n36vb8d8g02zr0402ymicvbifwdsqm7gy9iqqnwrn101"))))
"0fap121c18nbznyzvnqvsdiszg2nbmkas6zhgrz1f8jiv1lzqq04"))))
(build-system r-build-system)
(propagated-inputs
`(("r-lattice" ,r-lattice)))
@ -636,14 +636,14 @@ single hidden layer, and for multinomial log-linear models.")
(define-public r-rpart
(package
(name "r-rpart")
(version "4.1-13")
(version "4.1-15")
(source
(origin
(method url-fetch)
(uri (cran-uri "rpart" version))
(sha256
(base32
"0k29qx3k3pj5sgrpg0p47yd8i811rmdakaw57bigpq1449asc4cf"))))
"0p5frya963ppn476p5dxs2mnarsalksr6gw9zzmjsn8ikq7bx3ib"))))
(build-system r-build-system)
(home-page "https://cran.r-project.org/web/packages/rpart")
(synopsis "Recursive partitioning and regression trees")
@ -1120,13 +1120,13 @@ legends.")
(define-public r-ggplot2
(package
(name "r-ggplot2")
(version "3.1.0")
(version "3.1.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "ggplot2" version))
(sha256
(base32 "1msy36r21nlmnpyaw2m9k0ykmnd19b9il01b65w457pfw75prrs9"))))
(base32 "0y8cks9r9hvjlx0isnvbgs3p0al167hlr3q7c3syfcj77dzjkpmz"))))
(build-system r-build-system)
(propagated-inputs
`(("r-digest" ,r-digest)
@ -1635,13 +1635,13 @@ defined in different packages.")
(define-public r-rlang
(package
(name "r-rlang")
(version "0.3.3")
(version "0.3.4")
(source (origin
(method url-fetch)
(uri (cran-uri "rlang" version))
(sha256
(base32
"1pdlafnijpd2vzy8jxcxwakfi66n4qzrqxvcxi1ja389m066cvbb"))))
"1pks7d2xavzgaxqrnk3f79qsmv4wqv93f8991jv93pnb1mxpyijf"))))
(build-system r-build-system)
(home-page "http://rlang.tidyverse.org")
(synopsis "Functions for base types, core R and Tidyverse features")
@ -1827,13 +1827,13 @@ times.")
(define-public r-data-table
(package
(name "r-data-table")
(version "1.12.0")
(version "1.12.2")
(source (origin
(method url-fetch)
(uri (cran-uri "data.table" version))
(sha256
(base32
"1xz388khklqqc39r1cmjvqm65azambgzqw0743aypm6v4chi26v1"))))
"1x929lwhai6nkppm4zvicyw5qh5va5sizp86r30qnfkh1n7w2mfv"))))
(build-system r-build-system)
(home-page "https://github.com/Rdatatable/data.table/wiki")
(synopsis "Enhanced version of data.frame R object")
@ -2056,13 +2056,13 @@ jackknifed confidence intervals are available for most estimates.")
(define-public r-rversions
(package
(name "r-rversions")
(version "1.0.3")
(version "1.1.0")
(source (origin
(method url-fetch)
(uri (cran-uri "rversions" version))
(sha256
(base32
"0i2gi05nrvknr7g89rbppkswyfcwwd4r9gp75fdfhpah8sgq1l11"))))
"0g4wvq6m9inhy6ww18lvkhkgarb1m9dp2kdxkkyk5qvldgqa598l"))))
(build-system r-build-system)
(propagated-inputs
`(("r-curl" ,r-curl)
@ -2096,14 +2096,14 @@ limited to R.")
(define-public r-backports
(package
(name "r-backports")
(version "1.1.3")
(version "1.1.4")
(source
(origin
(method url-fetch)
(uri (cran-uri "backports" version))
(sha256
(base32
"1hac46xaawnqajlsfb5k7pfkc2ya9h76s5qv9ycj3jafh93d26z4"))))
"00zz969vc2gfi5p9q65pzghq2bxm3p9zqgwqswkyz9rgybz5wjzf"))))
(build-system r-build-system)
(home-page "https://cran.r-project.org/web/packages/backports")
(synopsis "Reimplementations of functions introduced since R 3.0.0")
@ -2421,13 +2421,13 @@ informative error messages when it's not available.")
(define-public r-devtools
(package
(name "r-devtools")
(version "2.0.1")
(version "2.0.2")
(source (origin
(method url-fetch)
(uri (cran-uri "devtools" version))
(sha256
(base32
"1nyspqicn9zd1rgq3k07b3179i8w5ys6jbd65g9q8qczrb7z3x8f"))))
"028pppj39ng7q17k27531s8k00lmw982vz5krn74n9b8f2azm8lr"))))
(build-system r-build-system)
(propagated-inputs
`(("r-callr" ,r-callr)
@ -2521,13 +2521,13 @@ disk (or a connection).")
(define-public r-plotrix
(package
(name "r-plotrix")
(version "3.7-4")
(version "3.7-5")
(source (origin
(method url-fetch)
(uri (cran-uri "plotrix" version))
(sha256
(base32
"1hs0zwaqs34559girinvysjfbvznyn8znp9cwvkqx6k2cqvcjinj"))))
"0k6ivryac1k81z2dijjds376a9jxwk8rf5g48snj67cnjffkybxj"))))
(build-system r-build-system)
(home-page "https://cran.r-project.org/web/packages/plotrix")
(synopsis "Various plotting functions")
@ -3805,13 +3805,13 @@ features present in other programming languages.")
(define-public r-plotly
(package
(name "r-plotly")
(version "4.8.0")
(version "4.9.0")
(source (origin
(method url-fetch)
(uri (cran-uri "plotly" version))
(sha256
(base32
"19p8pa03q9mw5vaan7r56xgd13d90ssiz0flbrkvpfrir2105ybq"))))
"1kz2hm7vnkn4clxr6yyxxnmdmkz9zwjq6bzysw7j27r3721i8qgp"))))
(build-system r-build-system)
(propagated-inputs
`(("r-base64enc" ,r-base64enc)
@ -4427,13 +4427,13 @@ data at that region, and avoids over-plotting.")
(define-public r-ggthemes
(package
(name "r-ggthemes")
(version "4.1.0")
(version "4.1.1")
(source (origin
(method url-fetch)
(uri (cran-uri "ggthemes" version))
(sha256
(base32
"1a6r384v72hb91qkg9rz2m7s3qskbl9haxynf2vzz6v1ak9xd4c5"))))
"092hks6bxi6al8nclgswnzfmx5wp6n3qf63aqiajca7dx8w8n0m2"))))
(build-system r-build-system)
(propagated-inputs
`(("r-ggplot2" ,r-ggplot2)

7
gnu/packages/suckless.scm
View File

@ -496,15 +496,14 @@ cups server to be installed.")
(define-public noice
(package
(name "noice")
(version "0.7")
(version "0.8")
(source
(origin
(method url-fetch)
(uri (string-append "https://dl.2f30.org/releases/"
name "-" version ".tar.gz"))
"noice-" version ".tar.gz"))
(sha256
(base32
"03b0kzngzacfpz4n8lgbvia2s765i5bkw55v482hh4m49dm41gpc"))))
(base32 "0g01iwzscdv27c1idv93gd74kjzy3n9kazgm6qz08rygp96qx4xw"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; no tests

17
gnu/packages/terminals.scm
View File

@ -249,10 +249,14 @@ compatibility to existing emulators like xterm, gnome-terminal, konsole, etc.")
"0q62kjsvy2iwy8adfiygx2bfwlh83rphgxbis95ycspqidg9py87"))
(patches
(search-patches "kmscon-runtime-keymap-switch.patch"))
(modules '((guix build utils)))))
(modules '((guix build utils)))
(file-name (git-file-name name version))))
(build-system gnu-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
`(;; The closure of MESA is huge so we'd rather avoid it.
#:disallowed-references (,mesa)
#:phases (modify-phases %standard-phases
(replace 'bootstrap
(lambda _
(setenv "NOCONFIGURE" "indeed")
@ -285,7 +289,10 @@ compatibility to existing emulators like xterm, gnome-terminal, konsole, etc.")
("libtsm" ,libtsm)
("libxkbcommon" ,libxkbcommon)
("logind" ,elogind)
("mesa" ,mesa)
;; MESA can be used for accelerated video output via OpenGLESv2, but
;; it's a bit dependency that we'd rather avoid in the installation
;; image.
;; ("mesa" ,mesa)
("pango" ,pango)
("udev" ,eudev)))
(synopsis "Linux KMS-based terminal emulator")
@ -377,7 +384,7 @@ to all types of devices that provide serial consoles.")
(define-public beep
(package
(name "beep")
(version "1.4.3")
(version "1.4.4")
(source
(origin
(method git-fetch)
@ -390,7 +397,7 @@ to all types of devices that provide serial consoles.")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1gramwa2zm59kqjhv96fi8vg7l6lyffv02h0310vb90naschi99g"))))
(base32 "1bk7g63qpiclbq20iz2x238by8s1b2iafdim7i6dq1i5n01s7lgx"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; no tests

2
gnu/packages/tex.scm
View File

@ -6022,7 +6022,7 @@ typearea (which are the main parts of the bundle).")
(copy-recursively (assoc-ref %build-inputs "source") target)
#t))))
(home-page "https://www.ctan.org/pkg/listofitems")
(synopsis "Grab items in lists using user-specified seperation character")
(synopsis "Grab items in lists using user-specified separation character")
(description
"This package allows one to capture all the items of a list, for which
the parsing character has been selected by the user, and to access any of

6
gnu/packages/tls.scm
View File

@ -529,13 +529,13 @@ netcat implementation that supports TLS.")
(package
(name "python-acme")
;; Remember to update the hash of certbot when updating python-acme.
(version "0.33.0")
(version "0.33.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "acme" version))
(sha256
(base32
"0gmnbjanv8dl8035n2b30wisqn4w9rr6fxzxrbrbnhhd40pnlplx"))))
"10ks4wp55qxzkf8ms3xcfs5njg2zz7w499wh24gzw7h7s1qxp35k"))))
(build-system python-build-system)
(arguments
`(#:phases
@ -586,7 +586,7 @@ netcat implementation that supports TLS.")
(uri (pypi-uri name version))
(sha256
(base32
"0iiqr306zy56y8wpxsvzw1izs184pzps72kxhssmznqlgz5ngni5"))))
"1nf3bb6j3nmdd5bcp3k7d6jqilmwvpzllzpr5niwaghgqlr3y86m"))))
(build-system python-build-system)
(arguments
`(,@(substitute-keyword-arguments (package-arguments python-acme)

4
gnu/packages/upnp.scm
View File

@ -32,14 +32,14 @@
(define-public miniupnpc
(package
(name "miniupnpc")
(version "2.1.20190403")
(version "2.1.20190408")
(source
(origin
(method url-fetch)
(uri (string-append "https://miniupnp.tuxfamily.org/files/"
name "-" version ".tar.gz"))
(sha256
(base32 "0qgwcinj8h312v2995qc2z1lbpmw916glkc8j9fa16xr4l2skxfy"))))
(base32 "1v0l2m8j7r6jiy871d6v11ls243xqn6s3856iwd3bmk5c37npi50"))))
(build-system gnu-build-system)
(native-inputs
`(("python" ,python-2)))

135
gnu/packages/version-control.scm
View File

@ -522,13 +522,14 @@ everything from small to very large projects with speed and efficiency.")
(name "libgit2")
(version "0.28.1")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/libgit2/libgit2/"
"archive/v" version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/libgit2/libgit2.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0swk2dyq5a4p1jn5wvbcsrxckhh808vifxz5y8w663avg541188c"))
"0j5p0hhz2wizvgkf0nbpd8g32mb5bg1vp8ckpbhb0pq38ja4h43r"))
(patches (search-patches "libgit2-avoid-python.patch"
"libgit2-mtime-0.patch"))
@ -551,6 +552,10 @@ everything from small to very large projects with speed and efficiency.")
(("/bin/cp") (which "cp"))
(("/bin/rm") (which "rm")))
#t))
(add-after 'unpack 'make-git-checkout-writable
(lambda _
(for-each make-file-writable (find-files "."))
#t))
;; Run checks more verbosely.
(replace 'check
(lambda _ (invoke "./libgit2_clar" "-v" "-Q"))))))
@ -577,14 +582,15 @@ write native speed custom Git applications in any language with bindings.")
(package
(name "git-crypt")
(version "0.5.0")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/AGWA/git-crypt"
"/archive/" version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"0454fdmgm5f3razkn8n03lfqm5zyzvr4r2528zmlxiwba9518l2i"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/AGWA/git-crypt.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "1x9209n3k49k998saadr2d0lmvs01smjinx7gzzyjdwj9l904sii"))))
(build-system gnu-build-system)
(inputs
`(("git" ,git)
@ -771,14 +777,13 @@ a built-in cache to decrease server I/O pressure.")
(version "0.5.5")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/davisp/ghp-import/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/davisp/ghp-import.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"0x887v690xsac2hzjkpbvp3a6crh3m08mqbk3nb4xwc9dnk869q7"))))
(base32 "12pmw3zz3i57ljnm0rxdyjqdyhisbvy18mjwkb3bzp5pgzs2f45c"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
@ -1026,14 +1031,15 @@ manipulate them in various ways.")
(package
(name "vcsh")
(version "1.20151229")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/RichiH/vcsh/archive/v"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"1ym3swkh738c3vciffvlr96vqzhwmzkb8ajqzap8f0j9n039a1mf"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/RichiH/vcsh.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1grpj45nbpv4j60vd2kg4rj53zrm0bc0h9l4pfd3c2mwbvywm6ab"))))
(build-system gnu-build-system)
(native-inputs
`(("which" ,which)))
@ -1100,15 +1106,15 @@ also walk each side of a merge and test those changes individually.")
(package
(name "gitolite")
(version "3.6.7")
(source (origin
(method url-fetch)
(uri (string-append
"https://github.com/sitaramc/gitolite/archive/v"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"1idxipg0df80bhjcxgwxs3lllqnkvhwpinmfv1xvg1l98fxiapgp"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/sitaramc/gitolite.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0rmyzr66lxh2ildf3h1nh3hh2ndwk21rjdin50r5vhwbdd7jg8vb"))))
(build-system gnu-build-system)
(arguments
'(#:tests? #f ; no tests
@ -1762,14 +1768,15 @@ output of the @code{git} command.")
(package
(name "findnewest")
(version "0.3")
(source (origin
(method url-fetch)
(uri (string-append
"https://github.com/0-wiz-0/findnewest/archive/findnewest-"
version ".tar.gz"))
(sha256
(base32
"1ydis4y0amkgfr4y60sn076f1l41ya2kn89kfd9fqf44f9ccgb5r"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/0-wiz-0/findnewest.git")
(commit (string-append "findnewest-" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1x1cbn2b27h5r0ah5xc06fkalfdci2ngrgd4wibxjw0h88h0nvgq"))))
(build-system gnu-build-system)
(native-inputs `(("autoconf" ,autoconf)
("automake" ,automake)))
@ -1833,15 +1840,15 @@ Mercurial, Bazaar, Darcs, CVS, Fossil, and Veracity.")
(package
(name "git-annex-remote-hubic")
(version "0.3.1")
(source (origin
(method url-fetch)
(uri (string-append
"https://github.com/Schnouki/" name "/archive/v"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"196g3jkaybjx11nbr51n0cjps3wjzb145ab76y717diqvvxp5v4r"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/Schnouki/git-annex-remote-hubic.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "16y9sk67hfi17h9n2kkffyabfccksh5rab40hhk69v6cxmbpn2sx"))))
(build-system python-build-system)
(arguments `(#:python ,python-2))
(native-inputs
@ -2096,18 +2103,18 @@ how information about the merge is displayed.")
(package
(name "git-imerge")
(version "1.1.0")
(source (origin
(method url-fetch)
(uri (string-append
"https://github.com/mhagger/git-imerge/archive/v"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"0a6ay8fpgz3yd84jc40w41x0rcfpan6bcq4wd1hxiiqwb51jysb2"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/mhagger/git-imerge.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0vi1w3f0yk4gqhxj2hzqafqq28rihyhyfnp8x7xzib96j2si14a4"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; The are only manual test scripts.
`(#:tests? #f ; only manual test scripts
#:make-flags (list (string-append "DESTDIR=" %output)
"PREFIX=")
#:phases

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