gnu: Add r-pcaexplorer.
* gnu/packages/bioconductor.scm (r-pcaexplorer): New variable.
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@ -5073,6 +5073,61 @@ annotation packages each of which has its own schema by taking advantage of
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the fact that each of these packages implements a select methods.")
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(license license:artistic2.0)))
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(define-public r-pcaexplorer
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(package
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(name "r-pcaexplorer")
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(version "2.22.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "pcaExplorer" version))
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(sha256
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(base32
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"0xkafpi6y5n8hljdaj183hd5z4ik7lpbklg2cbx1hwfz4n4hh1bl"))))
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(properties `((upstream-name . "pcaExplorer")))
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(build-system r-build-system)
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(propagated-inputs
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(list r-annotationdbi
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r-base64enc
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r-biomart
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r-deseq2
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r-dt
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r-genefilter
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r-genomicranges
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r-ggplot2
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r-ggrepel
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r-go-db
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r-gostats
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r-heatmaply
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r-iranges
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r-knitr
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r-limma
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r-nmf
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r-pheatmap
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r-plotly
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r-plyr
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r-rmarkdown
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r-s4vectors
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r-scales
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r-shiny
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r-shinyace
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r-shinybs
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r-shinydashboard
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r-summarizedexperiment
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r-threejs
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r-tidyr
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r-topgo))
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(native-inputs (list r-knitr))
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(home-page "https://github.com/federicomarini/pcaExplorer")
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(synopsis
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"Interactive Visualization of RNA-seq Data Using a Principal Components Approach")
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(description
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"This package provides functionality for interactive visualization of RNA-seq
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datasets based on Principal Components Analysis. The methods provided allow for
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quick information extraction and effective data exploration. A Shiny
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application encapsulates the whole analysis.")
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(license license:expat)))
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(define-public r-pcamethods
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(package
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(name "r-pcamethods")
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