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gnu: Add r-presto.

* gnu/packages/bioinformatics.scm (r-presto): New variable.
master
zimoun 2021-09-13 16:20:28 +02:00 committed by Ricardo Wurmus
parent 8e54aafa39
commit f80824fe09
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@ -21,6 +21,7 @@
;;; Copyright © 2020 Bonface Munyoki Kilyungi <bonfacemunyoki@gmail.com>
;;; Copyright © 2021 Tim Howes <timhowes@lavabit.com>
;;; Copyright © 2021 Hong Li <hli@mdc-berlin.de>
;;; Copyright © 2021 Simon Tournier <zimon.toutoune@gmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
@ -7417,6 +7418,39 @@ sequence.")
(supported-systems '("i686-linux" "x86_64-linux"))
(license license:bsd-3)))
(define-public r-presto
(let ((commit "052085db9c88aa70a28d11cc58ebc807999bf0ad")
(revision "0"))
(package
(name "r-presto")
(version (git-version "1.0.0" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/immunogenomics/presto")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32 "1c3fmag4r4p2lvbvxlxyck9dvfw1prbwcl9665mmlx4a35750hk8"))))
(properties `((upstream . "presto")))
(build-system r-build-system)
(propagated-inputs
`(("r-data-table" ,r-data-table)
("r-deseq2" ,r-deseq2)
("r-dplyr" ,r-dplyr)
("r-matrix" ,r-matrix)
("r-rcpp" ,r-rcpp)
("r-rcpparmadillo" ,r-rcpparmadillo)
("r-reshape2" ,r-reshape2)
("r-rlang" ,r-rlang)
("r-tidyr" ,r-tidyr)))
(home-page "https://github.com/immunogenomics/presto")
(synopsis "Fast Functions for Differential Expression using Wilcox and AUC")
(description "This package performs a fast Wilcoxon rank sum test and
auROC analysis.")
(license license:gpl3))))
(define-public r-snapatac
(package
(name "r-snapatac")