gnu: Add python-pandas-2.
* gnu/packages/python-science.scm (python-pandas-2): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net> Change-Id: I7f0510f9021d4eac3c981e5e58f73dc3ec7efd2fmaster
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@ -717,6 +717,115 @@ and intuitive. It aims to be the fundamental high-level building block for
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doing practical, real world data analysis in Python.")
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(license license:bsd-3)))
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(define-public python-pandas-2
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(package
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(name "python-pandas")
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(version "2.1.1")
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(source
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(origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/pandas-dev/pandas")
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(commit (string-append "v" version))))
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(file-name (git-file-name name version))
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(sha256
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(base32 "1v9j38bvw739csdfl98ga6fqjdm61q3p5a2l7h364kg925nbc9r1"))))
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(build-system pyproject-build-system)
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(arguments
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(list
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#:test-flags
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#~(list "--pyargs" "pandas"
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;; "--exitfirst"
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;; FIXME "-n" (number->string (parallel-job-count))
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"-m" "not slow and not network and not db"
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"-k" (string-append
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"not test_git_version"
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" and not test_show_versions_console"
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;; Not testing ~ expansion.
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" and not test_expand_user"
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" and not test_get_handle_with_path"
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;; These test access the internet (see:
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;; https://github.com/pandas-dev/pandas/issues/45085).:
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;; pandas/tests/io/xml/test_xml.py::test_wrong_url[lxml]
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;; pandas/tests/io/xml/test_xml.py::test_wrong_url[etree]
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" and not test_wrong_url"
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;; TODO: Missing input
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" and not TestS3"
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" and not s3"
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;; This test fails when run with pytest-xdist
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;; (see: https://github.com/pandas-dev/pandas/issues/39096).
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" and not test_memory_usage"
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" and not test_parsing_tzlocal_deprecated"))
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#:phases
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#~(modify-phases %standard-phases
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(add-after 'unpack 'version-set-by-guix
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(lambda _
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(with-output-to-file "_version_meson.py"
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(lambda _
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(display
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(string-append "__version__ = \""
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#$(package-version this-package)
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"\""))))))
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(add-before 'check 'prepare-x
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(lambda _
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(system "Xvfb &")
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(setenv "DISPLAY" ":0")
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(setenv "HOME" ".")))
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(add-after 'unpack 'patch-which
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(lambda _
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(substitute* "pandas/io/clipboard/__init__.py"
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(("^WHICH_CMD = .*")
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(string-append "WHICH_CMD = \""
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#$(this-package-input "which")
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"/bin/which\"\n")))))
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;; The compiled libraries are only in the output at this point,
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;; but they are needed to run tests.
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;; FIXME: This should be handled by the pyargs pytest argument,
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;; but is not for some reason.
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(add-before 'check 'pre-check
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(lambda _
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(copy-recursively
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(string-append #$output
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"/lib/python3.10/site-packages/pandas/_libs")
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"pandas/_libs"))))))
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(propagated-inputs
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(list python-dateutil
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python-jinja2
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python-matplotlib
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python-numpy
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python-openpyxl
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python-pytz
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python-tzdata
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python-xlrd
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python-xlsxwriter))
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(inputs
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(list which xclip xsel))
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(native-inputs
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(list meson-python/newer
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python-beautifulsoup4
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python-cython-0.29.35
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python-html5lib
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python-lxml
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python-matplotlib
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python-openpyxl
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python-pytest-asyncio
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python-pytest-next
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python-pytest-localserver
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python-pytest-mock
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python-pytest-xdist
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python-versioneer
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;; Needed to test clipboard support.
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xorg-server-for-tests))
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(home-page "https://pandas.pydata.org")
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(synopsis "Data structures for data analysis, time series, and statistics")
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(description
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"Pandas is a Python package providing fast, flexible, and expressive data
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structures designed to make working with structured (tabular,
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multidimensional, potentially heterogeneous) and time series data both easy
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and intuitive. It aims to be the fundamental high-level building block for
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doing practical, real world data analysis in Python.")
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(license license:bsd-3)))
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(define-public python-pandas-stubs
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(package
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(name "python-pandas-stubs")
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