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gnu: vcflib: Update to 1.0.3. 

* gnu/packages/bioinformatics.scm (vcflib): Update to 1.0.3.
[source]: Remove trailing #t.
[arguments]: Remove trailing #t from phases.
master
Efraim Flashner 2022-04-19 21:54:57 +03:00
parent 0b681c5896
commit ffb616b69d
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1 changed files with 5 additions and 8 deletions
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@ -14478,7 +14478,7 @@ library automatically handles index file generation and use.")
(define-public vcflib (define-public vcflib
(package (package
(name "vcflib") (name "vcflib")
(version "1.0.2") (version "1.0.3")
(source (source
(origin (origin
(method git-fetch) (method git-fetch)
@ -14487,7 +14487,7 @@ library automatically handles index file generation and use.")
(commit (string-append "v" version)))) (commit (string-append "v" version))))
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 "1k1z3876kbzifj1sqfzsf3lgb4rw779hvkg6ryxbyq5bc2paj9kh")) (base32 "1r7pnajg997zdjkf1b38m14v0zqnfx52w7nbldwh1xpbpahb1hjh"))
(modules '((guix build utils))) (modules '((guix build utils)))
(snippet (snippet
'(begin '(begin
@ -14510,8 +14510,7 @@ library automatically handles index file generation and use.")
(("Fasta.h") "fastahack/Fasta.h")) (("Fasta.h") "fastahack/Fasta.h"))
(for-each delete-file-recursively (for-each delete-file-recursively
'("fastahack" "filevercmp" "fsom" "googletest" "intervaltree" '("fastahack" "filevercmp" "fsom" "googletest" "intervaltree"
"libVCFH" "multichoose" "smithwaterman")) "libVCFH" "multichoose" "smithwaterman"))))))
#t))))
(build-system cmake-build-system) (build-system cmake-build-system)
(inputs (inputs
(list bzip2 (list bzip2
@ -14540,8 +14539,7 @@ library automatically handles index file generation and use.")
(substitute* "CMakeLists.txt" (substitute* "CMakeLists.txt"
(("vcflib STATIC") "vcflib SHARED")) (("vcflib STATIC") "vcflib SHARED"))
(substitute* "test/Makefile" (substitute* "test/Makefile"
(("libvcflib.a") "libvcflib.so")) (("libvcflib.a") "libvcflib.so"))))
#t))
(add-after 'unpack 'unpack-submodule-sources (add-after 'unpack 'unpack-submodule-sources
(lambda* (#:key inputs #:allow-other-keys) (lambda* (#:key inputs #:allow-other-keys)
(let ((unpack (lambda (source target) (let ((unpack (lambda (source target)
@ -14556,8 +14554,7 @@ library automatically handles index file generation and use.")
(unpack "filevercmp-src" "filevercmp") (unpack "filevercmp-src" "filevercmp")
(unpack "fsom-src" "fsom") (unpack "fsom-src" "fsom")
(unpack "intervaltree-src" "intervaltree") (unpack "intervaltree-src" "intervaltree")
(unpack "multichoose-src" "multichoose")) (unpack "multichoose-src" "multichoose")))))
#t)))
;; This pkg-config file is provided by other distributions. ;; This pkg-config file is provided by other distributions.
(add-after 'install 'install-pkg-config-file (add-after 'install 'install-pkg-config-file
(lambda* (#:key outputs #:allow-other-keys) (lambda* (#:key outputs #:allow-other-keys)