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Author SHA1 Message Date
Ricardo Wurmus 282985f6c3
gnu: r-annotationforge: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-annotationforge): Update to 1.38.0.
 2022-05-28 23:19:09 +02:00
Ricardo Wurmus 3db3797305
gnu: r-annotationfilter: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-annotationfilter): Update to 1.20.0.
 2022-05-28 23:19:09 +02:00
Ricardo Wurmus 0dcb2df4e1
gnu: r-annotationdbi: Update to 1.58.0. 
* gnu/packages/bioconductor.scm (r-annotationdbi): Update to 1.58.0.
 2022-05-28 23:19:08 +02:00
Ricardo Wurmus 2563aeb416
gnu: r-annotate: Update to 1.74.0. 
* gnu/packages/bioconductor.scm (r-annotate): Update to 1.74.0.
 2022-05-28 23:19:08 +02:00
Ricardo Wurmus b928f25f51
gnu: r-affxparser: Update to 1.68.1. 
* gnu/packages/bioconductor.scm (r-affxparser): Update to 1.68.1.
 2022-05-28 23:19:08 +02:00
Ricardo Wurmus da1e879b9b
gnu: r-affyio: Update to 1.66.0. 
* gnu/packages/bioconductor.scm (r-affyio): Update to 1.66.0.
 2022-05-28 23:19:08 +02:00
Ricardo Wurmus fb1fb2b8c2
gnu: r-affycoretools: Update to 1.68.1. 
* gnu/packages/bioconductor.scm (r-affycoretools): Update to 1.68.1.
 2022-05-28 23:19:08 +02:00
Ricardo Wurmus d4af958ae8
gnu: r-affycontam: Update to 1.54.0. 
* gnu/packages/bioconductor.scm (r-affycontam): Update to 1.54.0.
 2022-05-28 23:19:08 +02:00
Ricardo Wurmus 83f8f3ae08
gnu: r-affycompatible: Update to 1.56.0. 
* gnu/packages/bioconductor.scm (r-affycompatible): Update to 1.56.0.
 2022-05-28 23:19:08 +02:00
Ricardo Wurmus 45a6d9c0f4
gnu: r-affycomp: Update to 1.72.0. 
* gnu/packages/bioconductor.scm (r-affycomp): Update to 1.72.0.
 2022-05-28 23:19:08 +02:00
Ricardo Wurmus 429e687e69
gnu: r-affy: Update to 1.74.0. 
* gnu/packages/bioconductor.scm (r-affy): Update to 1.74.0.
 2022-05-28 23:19:08 +02:00
Ricardo Wurmus a15c457c59
gnu: r-isoformswitchanalyzer: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-isoformswitchanalyzer): Update to 1.18.0.
 2022-05-28 23:19:08 +02:00
Ricardo Wurmus 285b5cb7fa
gnu: r-iranges: Update to 2.30.0. 
* gnu/packages/bioconductor.scm (r-iranges): Update to 2.30.0.
 2022-05-28 23:19:07 +02:00
Ricardo Wurmus 48c3389314
gnu: r-ideoviz: Update to 1.32.0. 
* gnu/packages/bioconductor.scm (r-ideoviz): Update to 1.32.0.
 2022-05-28 23:19:07 +02:00
Ricardo Wurmus 051b7e63f2
gnu: r-bluster: Update to 1.6.0. 
* gnu/packages/bioconductor.scm (r-bluster): Update to 1.6.0.
 2022-05-28 23:19:07 +02:00
Ricardo Wurmus 59fff0e2d2
gnu: r-drimseq: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-drimseq): Update to 1.24.0.
 2022-05-28 23:19:07 +02:00
Ricardo Wurmus cea1b9029a
gnu: r-derfinderhelper: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-derfinderhelper): Update to 1.30.0.
 2022-05-28 23:19:07 +02:00
Ricardo Wurmus a2173119ec
gnu: r-delayedarray: Update to 0.22.0. 
* gnu/packages/bioconductor.scm (r-delayedarray): Update to 0.22.0.
 2022-05-28 23:19:07 +02:00
Ricardo Wurmus d15f46c5cf
gnu: r-deepsnv: Update to 1.42.0. 
* gnu/packages/bioconductor.scm (r-deepsnv): Update to 1.42.0.
 2022-05-28 23:19:07 +02:00
Ricardo Wurmus 7149e667c1
gnu: r-decipher: Update to 2.24.0. 
* gnu/packages/bioconductor.scm (r-decipher): Update to 2.24.0.
 2022-05-28 23:19:07 +02:00
Ricardo Wurmus 25847e60fe
gnu: r-dearseq: Update to 1.8.1. 
* gnu/packages/bioconductor.scm (r-dearseq): Update to 1.8.1.
[propagated-inputs]: Add r-compquadform, r-dplyr, r-magrittr, r-reshape2, r-rlang,
r-tibble, and r-viridislite.
[native-inputs]: Add r-knitr.
 2022-05-28 23:19:07 +02:00
Ricardo Wurmus b0bd7ec471
gnu: r-cummerbund: Update to 2.38.0. 
* gnu/packages/bioconductor.scm (r-cummerbund): Update to 2.38.0.
 2022-05-28 23:19:07 +02:00
Ricardo Wurmus 6f0430cdc2
gnu: r-coverageview: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-coverageview): Update to 1.34.0.
 2022-05-28 23:19:06 +02:00
Ricardo Wurmus 00d51727e5
gnu: r-biocgenerics: Update to 0.42.0. 
* gnu/packages/bioconductor.scm (r-biocgenerics): Update to 0.42.0.
 2022-05-28 23:19:06 +02:00
Ricardo Wurmus b19400063e
gnu: r-biocversion: Update to 3.15.2. 
* gnu/packages/bioconductor.scm (r-biocversion): Update to 3.15.2.
 2022-05-28 23:19:06 +02:00
Ricardo Wurmus 75628fc7ce
gnu: r-aneufinder: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-aneufinder): Update to 1.24.0.
 2022-05-28 23:19:06 +02:00
Ricardo Wurmus 5f9a73d665
gnu: r-adductomicsr: Update to 1.12.0. 
* gnu/packages/bioconductor.scm (r-adductomicsr): Update to 1.12.0.
 2022-05-28 23:19:06 +02:00
Ricardo Wurmus a5e1a37cdf
gnu: r-agilp: Update to 3.28.0. 
* gnu/packages/bioconductor.scm (r-agilp): Update to 3.28.0.
 2022-05-28 23:19:06 +02:00
Ricardo Wurmus e704ed78b5
gnu: r-aggregatebiovar: Update to 1.6.0. 
* gnu/packages/bioconductor.scm (r-aggregatebiovar): Update to 1.6.0.
 2022-05-28 23:19:06 +02:00
Ricardo Wurmus 6e1d256151
gnu: r-agdex: Update to 1.44.0. 
* gnu/packages/bioconductor.scm (r-agdex): Update to 1.44.0.
 2022-05-28 23:19:06 +02:00
Ricardo Wurmus 052d0d283a
gnu: r-affyrnadegradation: Update to 1.42.0. 
* gnu/packages/bioconductor.scm (r-affyrnadegradation): Update to 1.42.0.
 2022-05-28 23:19:06 +02:00
Ricardo Wurmus f4a85d5555
gnu: r-affixcan: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-affixcan): Update to 1.14.0.
 2022-05-28 23:19:06 +02:00
Ricardo Wurmus 3e524e46a0
gnu: r-adsplit: Update to 1.66.0. 
* gnu/packages/bioconductor.scm (r-adsplit): Update to 1.66.0.
 2022-05-28 23:19:05 +02:00
Ricardo Wurmus 3a29b78fa9
gnu: r-adimpute: Update to 1.6.0. 
* gnu/packages/bioconductor.scm (r-adimpute): Update to 1.6.0.
 2022-05-28 23:19:05 +02:00
Ricardo Wurmus 1d3b5f80e7
gnu: r-adamgui: Update to 1.12.0. 
* gnu/packages/bioconductor.scm (r-adamgui): Update to 1.12.0.
 2022-05-28 23:19:05 +02:00
Ricardo Wurmus 69dc67d9aa
gnu: r-adam: Update to 1.12.0. 
* gnu/packages/bioconductor.scm (r-adam): Update to 1.12.0.
 2022-05-28 23:19:05 +02:00
Ricardo Wurmus 5911a8992b
gnu: r-absseq: Update to 1.50.0. 
* gnu/packages/bioconductor.scm (r-absseq): Update to 1.50.0.
 2022-05-28 23:19:05 +02:00
Ricardo Wurmus 67d858b97c
gnu: r-abarray: Update to 1.64.0. 
* gnu/packages/bioconductor.scm (r-abarray): Update to 1.64.0.
 2022-05-28 23:19:05 +02:00
Ricardo Wurmus 90d165ea86
gnu: r-biostrings: Update to 2.64.0. 
* gnu/packages/bioconductor.scm (r-biostrings): Update to 2.64.0.
[arguments]: Remove build phase 'patch-for-R-4.2.0.
 2022-05-28 23:19:05 +02:00
Ricardo Wurmus 413133e430
gnu: Add r-decoupler. 
* gnu/packages/bioconductor.scm (r-decoupler): New variable.
 2022-05-28 23:19:05 +02:00
Ricardo Wurmus 641f5c599e
gnu: apache-arrow: Update to 8.0.0. 
* gnu/packages/databases.scm (apache-arrow): Update to 8.0.0.
 2022-05-28 23:19:05 +02:00
Ricardo Wurmus 1445f2c508
gnu: Add r-rcppml. 
* gnu/packages/cran.scm (r-rcppml): New variable.
 2022-05-28 23:19:04 +02:00
Ricardo Wurmus 39dab63790
gnu: Add r-dixontest. 
* gnu/packages/cran.scm (r-dixontest): New variable.
 2022-05-28 23:19:04 +02:00
Ricardo Wurmus d723619fc3
gnu: r-biostrings: Patch for R 4.2.0. 
* gnu/packages/bioconductor.scm (r-biostrings)[arguments]: Add build phase
'patch-for-R-4.2.0.
 2022-05-28 23:19:04 +02:00
Ricardo Wurmus 02c8c3ffbd
gnu: r-rcurl: Update to 1.98-1.6. 
* gnu/packages/statistics.scm (r-rcurl): Update to 1.98-1.6.
[source]: Take from CRAN.
[arguments]: Remove trailing #T from build phase.
[native-inputs]: Add libxml2.
[inputs]: Use new input list style.
 2022-05-28 23:19:04 +02:00
Ricardo Wurmus 2e2fed31a3
gnu: nlopt: Update to 2.7.1. 
* gnu/packages/maths.scm (nlopt): Update to 2.7.1.
[source]: Fetch from git.
[build-system]: Use cmake-build-system.
[arguments]: Adjuts 'set-libnlopt-file-name phase.
[inputs]: Replace guile-2.0 with guile-3.0; add octave and python.
[native-inputs]: Add swig.
 2022-05-28 23:19:04 +02:00
Ricardo Wurmus 48328055d8
gnu: r-binom: Update to 1.1-1.1. 
* gnu/packages/statistics.scm (r-binom): Update to 1.1-1.1.
 2022-05-28 23:19:04 +02:00
Ricardo Wurmus 7fadf9bad7
gnu: r-desctools: Update to 0.99.45. 
* gnu/packages/statistics.scm (r-desctools): Update to 0.99.45.
[propagated-inputs]: Add r-httr and r-readxl.
 2022-05-28 23:19:04 +02:00
Ricardo Wurmus 55a04c5245
gnu: r-datasaurus: Update to 0.1.6. 
* gnu/packages/statistics.scm (r-datasaurus): Update to 0.1.6.
 2022-05-28 23:19:04 +02:00
Ricardo Wurmus 7d9ed0b53d
gnu: r-logspline: Update to 2.1.17. 
* gnu/packages/statistics.scm (r-logspline): Update to 2.1.17.
 2022-05-28 23:19:04 +02:00
Ricardo Wurmus 217d08960a
gnu: r-clubsandwich: Update to 0.5.6. 
* gnu/packages/statistics.scm (r-clubsandwich): Update to 0.5.6.
 2022-05-28 23:19:03 +02:00
Ricardo Wurmus a415f00c5d
gnu: r-tclust: Update to 1.5-1. 
* gnu/packages/statistics.scm (r-tclust): Update to 1.5-1.
 2022-05-28 23:19:03 +02:00
Ricardo Wurmus 58c5fe1918
gnu: r-car: Update to 3.0-13. 
* gnu/packages/statistics.scm (r-car): Update to 3.0-13.
 2022-05-28 23:19:03 +02:00
Ricardo Wurmus 40daf6db0a
gnu: r-nloptr: Update to 2.0.3. 
* gnu/packages/statistics.scm (r-nloptr): Update to 2.0.3.
 2022-05-28 23:19:03 +02:00
Ricardo Wurmus 8685079a32
gnu: r-quantreg: Update to 5.93. 
* gnu/packages/statistics.scm (r-quantreg): Update to 5.93.
[propagated-inputs]: Add r-mass and r-survival.
[native-inputs]: Add r-r-rsp.
[arguments]: Add phase 'set-HOME.
 2022-05-28 23:19:03 +02:00
Ricardo Wurmus f4721c4a41
gnu: r-rrcov: Update to 1.7-0. 
* gnu/packages/statistics.scm (r-rrcov): Update to 1.7-0.
 2022-05-28 23:19:03 +02:00
Ricardo Wurmus f327949d97
gnu: r-pcapp: Update to 2.0-1. 
* gnu/packages/statistics.scm (r-pcapp): Update to 2.0-1.
 2022-05-28 23:19:03 +02:00
Ricardo Wurmus 347104de8a
gnu: r-mclust: Update to 5.4.10. 
* gnu/packages/statistics.scm (r-mclust): Update to 5.4.10.
 2022-05-28 23:19:03 +02:00
Ricardo Wurmus 917c943fbc
gnu: r-randomforest: Update to 4.7-1.1. 
* gnu/packages/statistics.scm (r-randomforest): Update to 4.7-1.1.
 2022-05-28 23:19:03 +02:00
Ricardo Wurmus d1856b061c
gnu: r-lars: Update to 1.3. 
* gnu/packages/statistics.scm (r-lars): Update to 1.3.
 2022-05-28 23:19:03 +02:00
Ricardo Wurmus 98e40f2d46
gnu: r-gplots: Update to 3.1.3. 
* gnu/packages/statistics.scm (r-gplots): Update to 3.1.3.
 2022-05-28 23:19:02 +02:00
Ricardo Wurmus 9879075a14
gnu: r-gdata: Update to 2.18.0.1. 
* gnu/packages/statistics.scm (r-gdata): Update to 2.18.0.1.
 2022-05-28 23:19:02 +02:00
Ricardo Wurmus a853e9c7c4
gnu: r-gtools: Update to 3.9.2.1. 
* gnu/packages/statistics.scm (r-gtools): Update to 3.9.2.1.
 2022-05-28 23:19:02 +02:00
Ricardo Wurmus 417517cd3f
gnu: r-hmisc: Update to 4.7-0. 
* gnu/packages/statistics.scm (r-hmisc): Update to 4.7-0.
 2022-05-28 23:19:02 +02:00
Ricardo Wurmus e6b17481d9
gnu: r-matrixstats: Update to 0.62.0. 
* gnu/packages/statistics.scm (r-matrixstats): Update to 0.62.0.
 2022-05-28 23:19:02 +02:00
Ricardo Wurmus 334a26cb37
gnu: r-bigmemory: Update to 4.6.1. 
* gnu/packages/statistics.scm (r-bigmemory): Update to 4.6.1.
[propagated-inputs]: Add r-uuid.
[inputs]: Add util-linux:lib.
 2022-05-28 23:19:02 +02:00
Ricardo Wurmus 2af5707049
gnu: r-rtsne: Update to 0.16. 
* gnu/packages/statistics.scm (r-rtsne): Update to 0.16.
 2022-05-28 23:19:02 +02:00
Ricardo Wurmus c7563bf578
gnu: r-glmnet: Update to 4.1-4. 
* gnu/packages/statistics.scm (r-glmnet): Update to 4.1-4.
 2022-05-28 23:19:02 +02:00
Ricardo Wurmus 33c177ee36
gnu: r-dt: Update to 0.23. 
* gnu/packages/statistics.scm (r-dt): Update to 0.23.
 2022-05-28 23:19:02 +02:00
Ricardo Wurmus b2197d6e07
gnu: r-segmented: Update to 1.5-0. 
* gnu/packages/statistics.scm (r-segmented): Update to 1.5-0.
 2022-05-28 23:19:02 +02:00
Ricardo Wurmus acf09b40b5
gnu: r-rsqlite: Update to 2.2.14. 
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.2.14.
 2022-05-28 23:19:02 +02:00
Ricardo Wurmus 0bf0250138
gnu: r-rmarkdown: Update to 2.14. 
* gnu/packages/statistics.scm (r-rmarkdown): Update to 2.14.
 2022-05-28 23:19:02 +02:00
Ricardo Wurmus 195779e048
gnu: r-rcpparmadillo: Update to 0.11.1.1.0. 
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.11.1.1.0.
 2022-05-28 23:19:01 +02:00
Ricardo Wurmus 6f62d6f811
gnu: r-httr: Update to 1.4.3. 
* gnu/packages/statistics.scm (r-httr): Update to 1.4.3.
 2022-05-28 23:19:01 +02:00
Ricardo Wurmus 2d694eb39b
gnu: r-openssl: Update to 2.0.2. 
* gnu/packages/statistics.scm (r-openssl): Update to 2.0.2.
 2022-05-28 23:19:01 +02:00
Ricardo Wurmus cf63da4707
gnu: r-roxygen2: Update to 7.2.0. 
* gnu/packages/statistics.scm (r-roxygen2): Update to 7.2.0.
[propagated-inputs]: Add r-cli and r-withr.
 2022-05-28 23:19:01 +02:00
Ricardo Wurmus 69dc1acefd
gnu: r-checkmate: Update to 2.1.0. 
* gnu/packages/statistics.scm (r-checkmate): Update to 2.1.0.
[native-inputs]: Add r-knitr.
 2022-05-28 23:19:01 +02:00
Ricardo Wurmus 17e540f66f
gnu: r-ade4: Update to 1.7-19. 
* gnu/packages/statistics.scm (r-ade4): Update to 1.7-19.
 2022-05-28 23:19:01 +02:00
Ricardo Wurmus e5bc9d8cd8
gnu: r-dplyr: Update to 1.0.9. 
* gnu/packages/statistics.scm (r-dplyr): Update to 1.0.9.
 2022-05-28 23:19:01 +02:00
Ricardo Wurmus 3fa3f4c39e
gnu: r-tibble: Update to 3.1.7. 
* gnu/packages/statistics.scm (r-tibble): Update to 3.1.7.
 2022-05-28 23:19:01 +02:00
Ricardo Wurmus 51d6e174eb
gnu: r-testthat: Update to 3.1.4. 
* gnu/packages/statistics.scm (r-testthat): Update to 3.1.4.
 2022-05-28 23:19:01 +02:00
Ricardo Wurmus f4b6733924
gnu: r-knitr: Update to 1.39. 
* gnu/packages/statistics.scm (r-knitr): Update to 1.39.
 2022-05-28 23:19:01 +02:00
Ricardo Wurmus 3bdc46b1f3
gnu: r-ggplot2: Update to 3.3.6. 
* gnu/packages/statistics.scm (r-ggplot2): Update to 3.3.6.
 2022-05-28 23:19:01 +02:00
Ricardo Wurmus e4178aceb9
gnu: r-dichromat: Update to 2.0-0.1. 
* gnu/packages/statistics.scm (r-dichromat): Update to 2.0-0.1.
 2022-05-28 23:19:00 +02:00
Ricardo Wurmus a9ba9c78ac
gnu: r-mass: Update to 7.3-57. 
* gnu/packages/statistics.scm (r-mass): Update to 7.3-57.
 2022-05-28 23:19:00 +02:00
Ricardo Wurmus 7718bdabbd
gnu: r-mlearning: Update to 1.1.1. 
* gnu/packages/cran.scm (r-mlearning): Update to 1.1.1.
 2022-05-28 23:19:00 +02:00
Ricardo Wurmus 97a7dedc41
gnu: r-zoolog: Update to 1.0.1. 
* gnu/packages/cran.scm (r-zoolog): Update to 1.0.1.
 2022-05-28 23:19:00 +02:00
Ricardo Wurmus 0632b773f0
gnu: r-rfigshare: Update to 0.3.8. 
* gnu/packages/cran.scm (r-rfigshare): Update to 0.3.8.
[propagated-inputs]: Remove r-plyr.
[native-inputs]: Add r-knitr.
 2022-05-28 23:19:00 +02:00
Ricardo Wurmus 20d8275a2a
gnu: r-keras: Update to 2.9.0. 
* gnu/packages/cran.scm (r-keras): Update to 2.9.0.
 2022-05-28 23:19:00 +02:00
Ricardo Wurmus 2c3bcdce95
gnu: r-tensorflow: Update to 2.9.0. 
* gnu/packages/cran.scm (r-tensorflow): Update to 2.9.0.
 2022-05-28 23:19:00 +02:00
Ricardo Wurmus 76ecfcb472
gnu: r-stringfish: Update to 0.15.7. 
* gnu/packages/cran.scm (r-stringfish): Update to 0.15.7.
 2022-05-28 23:19:00 +02:00
Ricardo Wurmus c8baed28c2
gnu: r-exactextractr: Update to 0.8.2. 
* gnu/packages/cran.scm (r-exactextractr): Update to 0.8.2.
 2022-05-28 23:19:00 +02:00
Ricardo Wurmus 30cb1c0059
gnu: r-opencpu: Update to 2.2.8. 
* gnu/packages/cran.scm (r-opencpu): Update to 2.2.8.
 2022-05-28 23:19:00 +02:00
Ricardo Wurmus 28af966caa
gnu: r-rmisc: Update to 1.5.1. 
* gnu/packages/cran.scm (r-rmisc): Update to 1.5.1.
[propagated-inputs]: Remove r-rcpp.
 2022-05-28 23:18:59 +02:00
Ricardo Wurmus 1316ceb124
gnu: r-pdftools: Update to 3.2.1. 
* gnu/packages/cran.scm (r-pdftools): Update to 3.2.1.
 2022-05-28 23:18:59 +02:00
Ricardo Wurmus 25a47c6172
gnu: r-qdapregex: Update to 0.7.5. 
* gnu/packages/cran.scm (r-qdapregex): Update to 0.7.5.
 2022-05-28 23:18:59 +02:00
Ricardo Wurmus c484a63b88
gnu: r-pkgdown: Update to 2.0.3. 
* gnu/packages/cran.scm (r-pkgdown): Update to 2.0.3.
 2022-05-28 23:18:59 +02:00
Ricardo Wurmus bb0ac4a0ef
gnu: r-mlr3tuning: Update to 0.13.1. 
* gnu/packages/cran.scm (r-mlr3tuning): Update to 0.13.1.
 2022-05-28 23:18:59 +02:00
Ricardo Wurmus 3dcc98d817
gnu: r-bbotk: Update to 0.5.3. 
* gnu/packages/cran.scm (r-bbotk): Update to 0.5.3.
 2022-05-28 23:18:59 +02:00
Ricardo Wurmus 63691670cd
gnu: r-mlr3learners: Update to 0.5.3. 
* gnu/packages/cran.scm (r-mlr3learners): Update to 0.5.3.
 2022-05-28 23:18:59 +02:00
Ricardo Wurmus abb1d0ad6a
gnu: r-paradox: Update to 0.9.0. 
* gnu/packages/cran.scm (r-paradox): Update to 0.9.0.
 2022-05-28 23:18:59 +02:00
Ricardo Wurmus 5618adb20f
gnu: r-mlr3pipelines: Update to 0.4.1. 
* gnu/packages/cran.scm (r-mlr3pipelines): Update to 0.4.1.
 2022-05-28 23:18:59 +02:00
Ricardo Wurmus d5afacea9b
gnu: r-lpme: Update to 1.1.3. 
* gnu/packages/cran.scm (r-lpme): Update to 1.1.3.
 2022-05-28 23:18:58 +02:00
Ricardo Wurmus 2b8ae352f2
gnu: r-seurat: Update to 4.1.1. 
* gnu/packages/cran.scm (r-seurat): Update to 4.1.1.
 2022-05-28 23:18:58 +02:00
Ricardo Wurmus a72a43b1c1
gnu: r-seuratobject: Update to 4.1.0. 
* gnu/packages/cran.scm (r-seuratobject): Update to 4.1.0.
[propagated-inputs]: Add r-future, r-future-apply, r-progressr, r-rgeos, and r-sp.
 2022-05-28 23:18:58 +02:00
Ricardo Wurmus 11872751c6
gnu: r-altmeta: Update to 4.0. 
* gnu/packages/cran.scm (r-altmeta): Update to 4.0.
 2022-05-28 23:18:58 +02:00
Ricardo Wurmus 0ce4f34b63
gnu: r-lsa: Update to 0.73.3. 
* gnu/packages/cran.scm (r-lsa): Update to 0.73.3.
 2022-05-28 23:18:58 +02:00
Ricardo Wurmus a1ba5d4314
gnu: r-tidytext: Update to 0.3.3. 
* gnu/packages/cran.scm (r-tidytext): Update to 0.3.3.
 2022-05-28 23:18:58 +02:00
Ricardo Wurmus b7f48e45b1
gnu: r-tidypredict: Update to 0.4.9. 
* gnu/packages/cran.scm (r-tidypredict): Update to 0.4.9.
 2022-05-28 23:18:58 +02:00
Ricardo Wurmus 551aa7beab
gnu: r-igraph: Update to 1.3.1. 
* gnu/packages/cran.scm (r-igraph): Update to 1.3.1.
 2022-05-28 23:18:58 +02:00
Ricardo Wurmus d0fdab7c8c
gnu: r-exactranktests: Update to 0.8-35. 
* gnu/packages/cran.scm (r-exactranktests): Update to 0.8-35.
 2022-05-28 23:18:57 +02:00
Ricardo Wurmus bdd4773a00
gnu: r-spatstat-core: Update to 2.4-4. 
* gnu/packages/cran.scm (r-spatstat-core): Update to 2.4-4.
 2022-05-28 23:18:57 +02:00
Ricardo Wurmus 5e5aaa62af
gnu: r-spatstat-data: Update to 2.2-0. 
* gnu/packages/cran.scm (r-spatstat-data): Update to 2.2-0.
 2022-05-28 23:18:57 +02:00
Ricardo Wurmus b7cec63ed8
gnu: r-spatstat-sparse: Update to 2.1-1. 
* gnu/packages/cran.scm (r-spatstat-sparse): Update to 2.1-1.
 2022-05-28 23:18:57 +02:00
Ricardo Wurmus e6b216b04a
gnu: r-spatstat-utils: Update to 2.3-1. 
* gnu/packages/cran.scm (r-spatstat-utils): Update to 2.3-1.
 2022-05-28 23:18:57 +02:00
Ricardo Wurmus ba2da161bc
gnu: r-iml: Update to 0.11.0. 
* gnu/packages/cran.scm (r-iml): Update to 0.11.0.
[propagated-inputs]: Remove r-keras.
 2022-05-28 23:18:57 +02:00
Ricardo Wurmus f06c37d446
gnu: r-scrypt: Update to 0.1.4. 
* gnu/packages/cran.scm (r-scrypt): Update to 0.1.4.
 2022-05-28 23:18:57 +02:00
Ricardo Wurmus b69e363ada
gnu: r-brms: Update to 2.17.0. 
* gnu/packages/cran.scm (r-brms): Update to 2.17.0.
 2022-05-28 23:18:57 +02:00
Ricardo Wurmus b93b7211d2
gnu: r-projpred: Update to 2.1.2. 
* gnu/packages/cran.scm (r-projpred): Update to 2.1.2.
 2022-05-28 23:18:57 +02:00
Ricardo Wurmus 56a48826ef
gnu: r-optimx: Update to 2022-4.30. 
* gnu/packages/cran.scm (r-optimx): Update to 2022-4.30.
 2022-05-28 23:18:56 +02:00
Ricardo Wurmus 35fb1a91f5
gnu: r-packrat: Update to 0.8.0. 
* gnu/packages/cran.scm (r-packrat): Update to 0.8.0.
 2022-05-28 23:18:56 +02:00
Ricardo Wurmus 984542a9cd
gnu: r-irtoys: Update to 0.2.2. 
* gnu/packages/cran.scm (r-irtoys): Update to 0.2.2.
[native-inputs]: Add r-knitr.
 2022-05-28 23:18:56 +02:00
Ricardo Wurmus d690341eee
gnu: r-tam: Update to 4.0-16. 
* gnu/packages/cran.scm (r-tam): Update to 4.0-16.
 2022-05-28 23:18:56 +02:00
Ricardo Wurmus 91bb9baa95
gnu: r-cdm: Update to 8.1-12. 
* gnu/packages/cran.scm (r-cdm): Update to 8.1-12.
 2022-05-28 23:18:56 +02:00
Ricardo Wurmus 64a8d5df5a
gnu: r-bdgraph: Update to 2.67. 
* gnu/packages/cran.scm (r-bdgraph): Update to 2.67.
[native-inputs]: Add r-knitr.
 2022-05-28 23:18:56 +02:00
Ricardo Wurmus 10ec759fb4
gnu: r-lisreltor: Update to 0.1.5. 
* gnu/packages/cran.scm (r-lisreltor): Update to 0.1.5.
 2022-05-28 23:18:56 +02:00
Ricardo Wurmus ad9c851588
gnu: r-rockchalk: Update to 1.8.152. 
* gnu/packages/cran.scm (r-rockchalk): Update to 1.8.152.
 2022-05-28 23:18:56 +02:00
Ricardo Wurmus bd273a6b17
gnu: r-semtools: Update to 0.5-6. 
* gnu/packages/cran.scm (r-semtools): Update to 0.5-6.
 2022-05-28 23:18:56 +02:00
Ricardo Wurmus 6530b566b9
gnu: r-matrixextra: Update to 0.1.10. 
* gnu/packages/cran.scm (r-matrixextra): Update to 0.1.10.
 2022-05-28 23:18:56 +02:00
Ricardo Wurmus 0352dfa553
gnu: r-rsvg: Update to 2.3.1. 
* gnu/packages/cran.scm (r-rsvg): Update to 2.3.1.
 2022-05-28 23:18:56 +02:00
Ricardo Wurmus 5b9f8d7972
gnu: r-lim: Update to 1.4.7. 
* gnu/packages/cran.scm (r-lim): Update to 1.4.7.
 2022-05-28 23:18:55 +02:00
Ricardo Wurmus d3713d1aec
gnu: r-caret: Update to 6.0-92. 
* gnu/packages/cran.scm (r-caret): Update to 6.0-92.
 2022-05-28 23:18:55 +02:00
Ricardo Wurmus c6178da3d3
gnu: r-fda: Update to 6.0.3. 
* gnu/packages/cran.scm (r-fda): Update to 6.0.3.
[propagated-inputs]: Remove r-matrix.
[native-inputs]: Add r-knitr.
 2022-05-28 23:18:55 +02:00
Ricardo Wurmus 61052b3f1e
gnu: r-alabama: Update to 2022.4-1. 
* gnu/packages/cran.scm (r-alabama): Update to 2022.4-1.
 2022-05-28 23:18:55 +02:00
Ricardo Wurmus b788f97e26
gnu: r-gamlss: Update to 5.4-3. 
* gnu/packages/cran.scm (r-gamlss): Update to 5.4-3.
 2022-05-28 23:18:55 +02:00
Ricardo Wurmus 45b991e7e1
gnu: r-randtoolbox: Update to 2.0.0. 
* gnu/packages/cran.scm (r-randtoolbox): Update to 2.0.0.
[native-inputs]: Remove gfortran.
 2022-05-28 23:18:55 +02:00
Ricardo Wurmus d26d9d82eb
gnu: r-mda: Update to 0.5-3. 
* gnu/packages/cran.scm (r-mda): Update to 0.5-3.
 2022-05-28 23:18:55 +02:00
Ricardo Wurmus 78f653116a
gnu: r-reldist: Update to 1.7-1. 
* gnu/packages/cran.scm (r-reldist): Update to 1.7-1.
[propagated-inputs]: Remove r-hmisc.
 2022-05-28 23:18:55 +02:00
Ricardo Wurmus 4416578f91
gnu: r-subplex: Update to 1.8. 
* gnu/packages/cran.scm (r-subplex): Update to 1.8.
 2022-05-28 23:18:55 +02:00
Ricardo Wurmus a87f437b91
gnu: r-desolve: Update to 1.32. 
* gnu/packages/cran.scm (r-desolve): Update to 1.32.
 2022-05-28 23:18:55 +02:00
Ricardo Wurmus 51ddbf1368
gnu: r-rgdal: Update to 1.5-32. 
* gnu/packages/cran.scm (r-rgdal): Update to 1.5-32.
 2022-05-28 23:18:55 +02:00
Ricardo Wurmus 018becea7e
gnu: r-parameters: Update to 0.18.0. 
* gnu/packages/cran.scm (r-parameters): Update to 0.18.0.
 2022-05-28 23:18:54 +02:00
Ricardo Wurmus 6f73001e39
gnu: r-leiden: Update to 0.4.2. 
* gnu/packages/cran.scm (r-leiden): Update to 0.4.2.
 2022-05-28 23:18:54 +02:00
Ricardo Wurmus 9abfef11fd
gnu: r-xgboost: Update to 1.6.0.1. 
* gnu/packages/cran.scm (r-xgboost): Update to 1.6.0.1.
 2022-05-28 23:18:54 +02:00
Ricardo Wurmus 1655a72596
gnu: r-dalex: Update to 2.4.1. 
* gnu/packages/cran.scm (r-dalex): Update to 2.4.1.
 2022-05-28 23:18:54 +02:00
Ricardo Wurmus b9f2b030e4
gnu: r-pbmcapply: Update to 1.5.1. 
* gnu/packages/cran.scm (r-pbmcapply): Update to 1.5.1.
 2022-05-28 23:18:54 +02:00
Ricardo Wurmus f93554e5cc
gnu: r-mcmcpack: Update to 1.6-3. 
* gnu/packages/cran.scm (r-mcmcpack): Update to 1.6-3.
 2022-05-28 23:18:54 +02:00
Ricardo Wurmus 7131132ae5
gnu: r-text2vec: Update to 0.6.1. 
* gnu/packages/cran.scm (r-text2vec): Update to 0.6.1.
 2022-05-28 23:18:54 +02:00
Ricardo Wurmus 3aa01ca69f
gnu: r-mlapi: Update to 0.1.1. 
* gnu/packages/cran.scm (r-mlapi): Update to 0.1.1.
 2022-05-28 23:18:54 +02:00
Ricardo Wurmus ee8c5112c9
gnu: r-arrow: Update to 8.0.0. 
* gnu/packages/cran.scm (r-arrow): Update to 8.0.0.
 2022-05-28 23:18:54 +02:00
Ricardo Wurmus d66e52f2d9
gnu: r-aplot: Update to 0.1.4. 
* gnu/packages/cran.scm (r-aplot): Update to 0.1.4.
[propagated-inputs]: Remove r-yulab-utils.
 2022-05-28 23:18:54 +02:00
Ricardo Wurmus 62ba432c08
gnu: r-extrafont: Update to 0.18. 
* gnu/packages/cran.scm (r-extrafont): Update to 0.18.
 2022-05-28 23:18:54 +02:00
Ricardo Wurmus b6b8f8c395
gnu: r-r2html: Update to 2.3.3. 
* gnu/packages/cran.scm (r-r2html): Update to 2.3.3.
 2022-05-28 23:18:53 +02:00
Ricardo Wurmus a124a69046
gnu: r-hapassoc: Update to 1.2-9. 
* gnu/packages/cran.scm (r-hapassoc): Update to 1.2-9.
 2022-05-28 23:18:53 +02:00
Ricardo Wurmus 1d58744415
gnu: r-hierfstat: Update to 0.5-11. 
* gnu/packages/cran.scm (r-hierfstat): Update to 0.5-11.
 2022-05-28 23:18:53 +02:00
Ricardo Wurmus bad6152523
gnu: r-bookdown: Update to 0.26. 
* gnu/packages/cran.scm (r-bookdown): Update to 0.26.
 2022-05-28 23:18:53 +02:00
Ricardo Wurmus adfb8261c9
gnu: r-rms: Update to 6.3-0. 
* gnu/packages/cran.scm (r-rms): Update to 6.3-0.
 2022-05-28 23:18:53 +02:00
Ricardo Wurmus 6957585a41
gnu: r-polspline: Update to 1.1.20. 
* gnu/packages/cran.scm (r-polspline): Update to 1.1.20.
 2022-05-28 23:18:53 +02:00
Ricardo Wurmus ae53d4e29c
gnu: r-adegenet: Update to 2.1.6. 
* gnu/packages/cran.scm (r-adegenet): Update to 2.1.6.
 2022-05-28 23:18:53 +02:00
Ricardo Wurmus 0ab5079af9
gnu: r-spdep: Update to 1.2-4. 
* gnu/packages/cran.scm (r-spdep): Update to 1.2-4.
 2022-05-28 23:18:53 +02:00
Ricardo Wurmus 085029e733
gnu: r-seqinr: Update to 4.2-16. 
* gnu/packages/cran.scm (r-seqinr): Update to 4.2-16.
 2022-05-28 23:18:53 +02:00
Ricardo Wurmus 74ee51895a
gnu: r-gmodels: Update to 2.18.1.1. 
* gnu/packages/cran.scm (r-gmodels): Update to 2.18.1.1.
 2022-05-28 23:18:53 +02:00
Ricardo Wurmus 4c16cb4403
gnu: r-penalized: Update to 0.9-52. 
* gnu/packages/cran.scm (r-penalized): Update to 0.9-52.
 2022-05-28 23:18:53 +02:00
Ricardo Wurmus d4bfec54d7
gnu: r-moments: Update to 0.14.1. 
* gnu/packages/cran.scm (r-moments): Update to 0.14.1.
 2022-05-28 23:18:52 +02:00
Ricardo Wurmus a3613ed76d
gnu: r-minpack-lm: Update to 1.2-2. 
* gnu/packages/cran.scm (r-minpack-lm): Update to 1.2-2.
 2022-05-28 23:18:52 +02:00
Ricardo Wurmus d8a7ea0073
gnu: r-shinybs: Update to 0.61.1. 
* gnu/packages/cran.scm (r-shinybs): Update to 0.61.1.
 2022-05-28 23:18:52 +02:00
Ricardo Wurmus 1906d197b8
gnu: r-future-apply: Update to 1.9.0. 
* gnu/packages/cran.scm (r-future-apply): Update to 1.9.0.
 2022-05-28 23:18:52 +02:00
Ricardo Wurmus 3be0661b5f
gnu: r-future: Update to 1.26.1. 
* gnu/packages/cran.scm (r-future): Update to 1.26.1.
 2022-05-28 23:18:52 +02:00
Ricardo Wurmus 26cf8fd7a5
gnu: r-parallelly: Update to 1.31.1. 
* gnu/packages/cran.scm (r-parallelly): Update to 1.31.1.
 2022-05-28 23:18:52 +02:00
Ricardo Wurmus ec5682eaf4
gnu: r-globals: Update to 0.15.0. 
* gnu/packages/cran.scm (r-globals): Update to 0.15.0.
 2022-05-28 23:18:52 +02:00
Ricardo Wurmus 2b1400d659
gnu: r-epi: Update to 2.46. 
* gnu/packages/cran.scm (r-epi): Update to 2.46.
[propagated-inputs]: Remove r-purrr; add r-magrittr.
 2022-05-28 23:18:52 +02:00
Ricardo Wurmus 2ce26f27a4
gnu: r-spatialextremes: Update to 2.1-0. 
* gnu/packages/cran.scm (r-spatialextremes): Update to 2.1-0.
 2022-05-28 23:18:52 +02:00
Ricardo Wurmus 75a2d8e318
gnu: r-assertive-properties: Update to 0.0-5. 
* gnu/packages/cran.scm (r-assertive-properties): Update to 0.0-5.
 2022-05-28 23:18:52 +02:00
Ricardo Wurmus 0396e479f7
gnu: r-rnexml: Update to 2.4.7. 
* gnu/packages/cran.scm (r-rnexml): Update to 2.4.7.
 2022-05-28 23:18:51 +02:00
Ricardo Wurmus ad798636b8
gnu: r-flare: Update to 1.7.0.1. 
* gnu/packages/cran.scm (r-flare): Update to 1.7.0.1.
 2022-05-28 23:18:51 +02:00
Ricardo Wurmus 9683a3bfa6
gnu: r-rspectra: Update to 0.16-1. 
* gnu/packages/cran.scm (r-rspectra): Update to 0.16-1.
[native-inputs]: Add r-knitr.
 2022-05-28 23:18:51 +02:00
Ricardo Wurmus d408f8df2a
gnu: r-colorramps: Update to 2.3.1. 
* gnu/packages/cran.scm (r-colorramps): Update to 2.3.1.
 2022-05-28 23:18:51 +02:00
Ricardo Wurmus 13dc616316
gnu: r-admisc: Update to 0.27. 
* gnu/packages/cran.scm (r-admisc): Update to 0.27.
 2022-05-28 23:18:51 +02:00
Ricardo Wurmus 11e13a213d
gnu: r-ouch: Update to 2.18. 
* gnu/packages/cran.scm (r-ouch): Update to 2.18.
 2022-05-28 23:18:51 +02:00
Ricardo Wurmus 9d96f5c9c5
gnu: r-activity: Update to 1.3.2. 
* gnu/packages/cran.scm (r-activity): Update to 1.3.2.
[propagated-inputs]: Remove r-circular.
 2022-05-28 23:18:51 +02:00
Ricardo Wurmus e1048c8ef5
gnu: r-circular: Update to 0.4-95. 
* gnu/packages/cran.scm (r-circular): Update to 0.4-95.
 2022-05-28 23:18:50 +02:00
Ricardo Wurmus 3db089a292
gnu: r-ks: Update to 1.13.5. 
* gnu/packages/cran.scm (r-ks): Update to 1.13.5.
 2022-05-28 23:18:50 +02:00
Ricardo Wurmus 9f4b3bfec5
gnu: r-rgl: Update to 0.108.3.2. 
* gnu/packages/cran.scm (r-rgl): Update to 0.108.3.2.
 2022-05-28 23:18:50 +02:00
Ricardo Wurmus b4ad23fd8d
gnu: r-biocmanager: Update to 1.30.18. 
* gnu/packages/cran.scm (r-biocmanager): Update to 1.30.18.
 2022-05-28 23:18:50 +02:00
Ricardo Wurmus c64d37aa2d
gnu: r-afex: Update to 1.1-1. 
* gnu/packages/cran.scm (r-afex): Update to 1.1-1.
 2022-05-28 23:18:50 +02:00
Ricardo Wurmus 41261ba3c8
gnu: r-summarytools: Update to 1.0.1. 
* gnu/packages/cran.scm (r-summarytools): Update to 1.0.1.
 2022-05-28 23:18:50 +02:00
Ricardo Wurmus d90ccca7a4
gnu: r-usethis: Update to 2.1.6. 
* gnu/packages/cran.scm (r-usethis): Update to 2.1.6.
 2022-05-28 23:18:50 +02:00
Ricardo Wurmus 1a4f4cc6f5
gnu: r-effectsize: Update to 0.7.0. 
* gnu/packages/cran.scm (r-effectsize): Update to 0.7.0.
 2022-05-28 23:18:50 +02:00
Ricardo Wurmus 50f2249e19
gnu: r-bayestestr: Update to 0.12.1. 
* gnu/packages/cran.scm (r-bayestestr): Update to 0.12.1.
 2022-05-28 23:18:50 +02:00
Ricardo Wurmus 142ce27e7a
gnu: r-tmb: Update to 1.9.0. 
* gnu/packages/cran.scm (r-tmb): Update to 1.9.0.
 2022-05-28 23:18:49 +02:00
Ricardo Wurmus b56c3b790c
gnu: r-emmeans: Update to 1.7.4-1. 
* gnu/packages/cran.scm (r-emmeans): Update to 1.7.4-1.
 2022-05-28 23:18:49 +02:00
Ricardo Wurmus 847c134325
gnu: r-multcomp: Update to 1.4-19. 
* gnu/packages/cran.scm (r-multcomp): Update to 1.4-19.
 2022-05-28 23:18:49 +02:00
Ricardo Wurmus 0d606a229e
gnu: r-th-data: Update to 1.1-1. 
* gnu/packages/cran.scm (r-th-data): Update to 1.1-1.
 2022-05-28 23:18:49 +02:00
Ricardo Wurmus 80730da84e
gnu: r-furrr: Update to 0.3.0. 
* gnu/packages/cran.scm (r-furrr): Update to 0.3.0.
[propagated-inputs]: Remove r-ellipsis.
 2022-05-28 23:18:49 +02:00
Ricardo Wurmus f230bab5d9
gnu: r-svdialogs: Update to 1.1.0. 
* gnu/packages/cran.scm (r-svdialogs): Update to 1.1.0.
 2022-05-28 23:18:49 +02:00
Ricardo Wurmus bf192c0bef
gnu: r-labelled: Update to 2.9.1. 
* gnu/packages/cran.scm (r-labelled): Update to 2.9.1.
 2022-05-28 23:18:49 +02:00
Ricardo Wurmus c00b0070bf
gnu: r-dofuture: Update to 0.12.2. 
* gnu/packages/cran.scm (r-dofuture): Update to 0.12.2.
 2022-05-28 23:18:49 +02:00
Ricardo Wurmus 256e1f2358
gnu: r-drtmle: Update to 1.1.1. 
* gnu/packages/cran.scm (r-drtmle): Update to 1.1.1.
 2022-05-28 23:18:48 +02:00
Ricardo Wurmus 2bdc02ca09
gnu: r-cmplot: Update to 4.1.0. 
* gnu/packages/cran.scm (r-cmplot): Update to 4.1.0.
 2022-05-28 23:18:48 +02:00
Ricardo Wurmus 5ac39e4738
gnu: r-doby: Update to 4.6.13. 
* gnu/packages/cran.scm (r-doby): Update to 4.6.13.
 2022-05-28 23:18:48 +02:00