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853 Commits (079b7268bf0fdffe9ba6c31e6b05e8b62cff06e6)

Author SHA1 Message Date
zimoun 94006cc29c
gnu: mysql: Add wrapper around mysql_config.
Fixes <https://bugs.gnu.org/23045>.

* gnu/packages/databases.scm (mysql): Add a 'wrap-mysql_helpers phase to wrap
'mysql_config' and 'mysqld_safe'.
[inputs]: Add 'coreutils', 'gawk', 'grep', 'procps' and 'sed'.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2021-09-21 14:21:44 +00:00
Marius Bakke 11845c3a27
gnu: Remove python2-alembic.
This package currently fails to build and has no users in Guix.

* gnu/packages/databases.scm (python2-alembic): Remove variable.
2021-09-16 23:26:58 +02:00
Hartmut Goebel b7ef1e4efb
gnu: python-sql: Update to 1.3.0.
* gnu/packages/databases.scm (python-sql): Update to 1.3.0.
2021-09-16 21:51:43 +02:00
Marius Bakke 0711ad0452
gnu: python-sqlalchemy: Update to 1.4.23.
* gnu/packages/databases.scm (python-sqlalchemy): Update to 1.4.23.
[propagated-inputs]: Add PYTHON-GREENLET.
2021-09-15 23:38:51 +02:00
Marius Bakke d570b32a90
gnu: python-sadisplay: Update to 0.4.9.
* gnu/packages/databases.scm (python-sadisplay): Update to 0.4.9.
[arguments]: New field.  Override check phase.
[native-inputs]: Remove PYTHON-NOSE.  Add PYTHON-PYTEST.
2021-09-15 23:38:51 +02:00
Marius Bakke 9be916aaaf
gnu: python-alembic: Update to 1.7.1.
* gnu/packages/databases.scm (python-alembic): Update to 1.7.1.
[propagated-inputs]: Add PYTHON-IMPORTLIB-RESOURCES.
2021-09-15 23:38:50 +02:00
nixo c017e0b62c
gnu: nheko: Update to 0.8.2.
* gnu/packages/messaging.scm (nheko): Update to 0.8.2.
[source snippet]: Remove third_party folder.
[arguments]: Remove -fpermissive flag, remove remove-Werror phase, add phase
wrap-program and unbundle-dependencies.
[inputs]: Add gst-plugins-base, gst-plugins-bad, libnice, qtkeychain,
and unbundle blurhash, cpp-httplib and single-application, remove tweeny.
[native-inputs]: Add doxygen, graphviz used to build documentation.
[description]: Simplify by removing the long list, add new features.
(mtxclient): Update to 0.5.1.
[arguments]: Remove set-home phase.
* gnu/packages/databases.scm (lmdbxx): Update to 1.0.0.
[source]: Change repository to a fork required by nheko.
[home-page]: Update accordingly.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-09-03 22:08:51 +02:00
Efraim Flashner 1e0b984591
gnu: postgresql-9.6: Update to 9.6.23.
* gnu/packages/databases.scm (postgresql-9.6): Update to 9.6.23.
2021-08-27 15:03:08 +03:00
Efraim Flashner bb418a20ee
gnu: postgresql-10: Update to 10.18.
* gnu/packages/databases.scm (postgresql-10): Update to 10.18.
2021-08-27 15:03:08 +03:00
Efraim Flashner 3a58a0ed6a
gnu: postgresql-11: Update to 11.13.
* gnu/packages/databases.scm (postgresql-11): Update to 11.13.
2021-08-27 15:03:07 +03:00
Christopher Lemmer Webber 9455143907
Update copyright/name notices for Christine Lemmer-Webber.
* doc/guix-cookbook.texi: Update copyright/name for Christine Lemmer-Webber.
* gnu/build/image.scm: Likewise.
* gnu/build/vm.scm: Likewise.
* gnu/packages/admin.scm: Likewise.
* gnu/packages/assembly.scm: Likewise.
* gnu/packages/audio.scm: Likewise.
* gnu/packages/backup.scm: Likewise.
* gnu/packages/check.scm: Likewise.
* gnu/packages/databases.scm: Likewise.
* gnu/packages/emacs-xyz.scm: Likewise.
* gnu/packages/finance.scm: Likewise.
* gnu/packages/gnupg.scm: Likewise.
* gnu/packages/guile-xyz.scm: Likewise.
* gnu/packages/guile.scm: Likewise.
* gnu/packages/haskell-xyz.scm: Likewise.
* gnu/packages/linux.scm: Likewise.
* gnu/packages/mail.scm: Likewise.
* gnu/packages/password-utils.scm: Likewise.
* gnu/packages/perl.scm: Likewise.
* gnu/packages/python-web.scm: Likewise.
* gnu/packages/python-xyz.scm: Likewise.
* gnu/packages/python.scm: Likewise.
* gnu/packages/sphinx.scm: Likewise.
* gnu/packages/ssh.scm: Likewise.
* gnu/packages/xdisorg.scm: Likewise.
* gnu/services/networking.scm: Likewise.
* gnu/system/vm.scm: Likewise.
2021-08-15 14:15:37 -04:00
Ryan Sundberg 75e117bac7
gnu: rocksdb: set TEST_TMPDIR for faster test i/o.
The rocksdb test can take an egregious amount of time on a spinning HDD.
This will inherit guixbuild's /tmp mount for the rocksdb testing
directory.

* gnu/packages/databases.scm (rocksdb)[arguments]: set TEST_TMPDIR for
check phase

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-08-10 17:32:18 +02:00
Efraim Flashner ff477f6571
gnu: tdb: Update to 1.4.5.
* gnu/packages/databases.scm (tdb): Update to 1.4.5.
2021-08-04 16:34:32 +03:00
Ricardo Wurmus ef61998524
gnu: apache-arrow: Update to 5.0.0.
* gnu/packages/databases.scm (apache-arrow): Update to 5.0.0.
2021-07-29 17:11:08 +02:00
Ricardo Wurmus 532cfc5bd2
gnu: python-pyarrow: Fix parquet support.
Co-authored-by: Phil Beadling <phil@beadling.co.uk>.

* gnu/packages/databases.scm (python-pyarrow)[arguments]: Add phases
patch-cmake-variables, patch-parquet-library, and set-PYARROW_WITH_PARQUET.
[propagated-inputs]: Add "include" output of apache-arrow package.
2021-07-28 20:31:06 +02:00
Alexandre Hannud Abdo b8e7b284fc
gnu: Add sequeler.
* gnu/packages/databases.scm (sequeler): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-07-20 12:01:20 +03:00
Tobias Geerinckx-Rice f369695000
gnu: perl-sql-splitstatement: Update to 1.00023.
* gnu/packages/databases.scm (perl-sql-splitstatement): Update to 1.00023.
[native-inputs]: Add perl-test-differences and perl-test-script.
2021-07-02 03:05:58 +02:00
Tobias Geerinckx-Rice 0eb0fef346
gnu: perl-db-file: Update to 1.856.
* gnu/packages/databases.scm (perl-db-file): Update to 1.856.
2021-07-02 03:05:58 +02:00
Tobias Geerinckx-Rice 3e29bf169f
gnu: virtuoso-ose: Update to 7.2.6.
* gnu/packages/databases.scm (virtuoso-ose): Update to 7.2.6.
[source]: Get it from SourceForge.
[inputs]: Use the default OpenSSL version.
2021-06-30 21:34:28 +02:00
zimoun 1f2ea75aed
gnu: python2-sqlparse: Remove package.
* gnu/packages/databases.scm (python2-sqlparse): Remove variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-06-29 12:37:33 +02:00
Tobias Geerinckx-Rice 7f86f42671
gnu: mariadb-connector-c: Update to 3.1.13.
* gnu/packages/databases.scm (mariadb-connector-c): Update to 3.1.13.
2021-06-25 19:02:35 +02:00
Ricardo Wurmus bf0f9dd051
gnu: apache-arrow: Update to 4.0.1.
* gnu/packages/databases.scm (apache-arrow): Update to 4.0.1.
[arguments]: Remove trailing boolean; ensure that xsimd is not downloaded and
built anew.
[inputs]: Add xsimd.
2021-06-21 12:17:23 +02:00
Ricardo Wurmus 9e220f099d
gnu: Add nanodbc-for-irods.
* gnu/packages/databases.scm (nanodbc-for-irods): New variable.
2021-06-14 16:05:07 +02:00
zimoun 5ce19343ca
gnu: python2-orator: Remove package.
* gnu/packages/database.scm (python2-orator): Remove variable.
(python-orator)[properties]: Remove field.

Signed-off-by: Leo Famulari <leo@famulari.name>
2021-06-08 13:10:27 -04:00
Simon Streit 841edfa491
gnu: redis: Update to 6.2.4 [security fixes].
Fixes CVE-2021-29477.

* gnu/packages/databases.scm (redis): Update to 6.2.4.
[arguments]: Disable the 'integration/failover' test.

Signed-off-by: Leo Famulari <leo@famulari.name>
2021-06-02 00:54:39 -04:00
Tobias Geerinckx-Rice 36d2e48c30
gnu: lmdb: Update to 0.9.29.
* gnu/packages/databases.scm (lmdb): Update to 0.9.29.
2021-05-23 22:39:15 +02:00
Efraim Flashner f9fc3373e7
gnu: perl-dbd-pg: Update to 3.14.2.
* gnu/packages/databases.scm (perl-dbd-pg): Update to 3.14.2.
2021-05-19 23:01:26 +03:00
Leo Famulari 1b7ea563cd
gnu: PostgreSQL 9: Update to 9.6.22 [fixes CVE-2021-{32027,32028,32029}].
* gnu/packages/databases.scm (postgresql-9.6): Update to 9.6.22.
2021-05-17 15:05:18 -04:00
Leo Famulari 16da170f19
gnu: PostgreSQL 10: Update to 10.17 [fixes CVE-2021-{32027,32028,32029}].
* gnu/packages/databases.scm (postgresql-10): Update to 10.17.
2021-05-17 15:05:18 -04:00
Leo Famulari 49a99a744a
gnu: PostgreSQL 11: Update to 11.12 [fixes CVE-2021-{32027,32028,32029}].
* gnu/packages/databases.scm (postgresql-11): Update to 11.12.
2021-05-17 15:05:18 -04:00
Leo Famulari ef221c8b71
gnu: PostgreSQL: Update to 13.3 [fixes CVE-2021-{32027,32028,32029}].
* gnu/packages/databases.scm (postgresql-13)[replacement]: Use postgresql-13.3.
(postgresql-13.2): Replace with ...
(postgresql-13.3): ... new variable.
2021-05-17 15:05:14 -04:00
BonfaceKilz f8a4724c10
gnu: Add python-sqlalchemy-stubs.
* gnu/packages/databases.scm (python-sqlalchemy-stubs): New variable.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2021-05-12 16:12:24 +05:30
Marius Bakke 151f1720e3
gnu: python-sqlparse: Remove unnecessary runtime dependencies.
* gnu/packages/databases.scm (python-sqlparse)[arguments]: Override 'wrap'
phase.
2021-05-05 23:48:20 +02:00
Marius Bakke 314f96421e
gnu: python-sqlparse: Update to 0.4.1.
* gnu/packages/databases.scm (python-sqlparse): Update to 0.4.1.
2021-05-05 23:48:19 +02:00
Tobias Geerinckx-Rice 1ba3df1872
gnu: soci: Update to 4.0.2.
* gnu/packages/databases.scm (soci): Update to 4.0.2.
2021-05-01 11:29:12 +02:00
Pjotr Prins 04ab609b13
gnu: Add ruby-redis.
* gnu/packages/databases.scm (ruby-redis): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-04-26 14:42:13 +03:00
Ricardo Wurmus 34928cc43c
gnu: nanodbc: Build shared libraries.
* gnu/packages/databases.scm (nanodbc)[arguments]: Build shared libraries.
2021-04-23 16:07:54 +02:00
Ricardo Wurmus 2be32ecc74
gnu: Add nanodbc.
* gnu/packages/databases.scm (nanodbc): New variable.
2021-04-20 16:40:10 +02:00
Tobias Geerinckx-Rice bf5f75856e
gnu: freetds: Update to 1.2.20.
* gnu/packages/databases.scm (freetds): Update to 1.2.20.
2021-04-19 19:23:00 +02:00
Tobias Geerinckx-Rice 0f0c9d2b0f
gnu: freetds: Update to 1.2.19.
* gnu/packages/databases.scm (freetds): Update to 1.2.19.
2021-04-11 00:03:46 +02:00
methuselah-0 43c55856c8
gnu: Add galera.
* gnu/packages/databases.scm (galera): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-04-08 23:28:01 +02:00
Lars-Dominik Braun 14392c7789
gnu: python-tortoise-orm: Fix dependencies.
* gnu/packages/databases.scm (python-tortoise-orm) [propagated-inputs]:
Add missing dependency.
[arguments]: Relax pytz version requirement, remove iso8601 requirement.
2021-04-06 10:57:19 +02:00
Raghav Gururajan ac6e19b082
gnu: soci: Propagate inputs.
* gnu/packages/databases.scm (soci)[inputs]: Move to...
[propagated-inputs]: ... here.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2021-03-27 23:03:13 -04:00
Léo Le Bouter 52c8d07a4f
gnu: mariadb: Fix CVE-2021-27928.
* gnu/packages/patches/mariadb-CVE-2021-27928.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/databases.scm (mariadb/fixed): New variable. Apply patch.
(mariadb)[replacement]: Graft.
2021-03-26 02:21:51 +01:00
zimoun c74c4377b3
gnu: python2-rq: Remove package.
* gnu/packages/databases.scm (python2-rq): Delete.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2021-03-23 21:38:05 -04:00
Maxim Cournoyer 9bab0950f7
gnu: libmemcached: Disable test suite.
* gnu/packages/databases.scm (libmemcached): Disable test suite.  Removing
trailing #t.
[phases]{fix-configure}: Remove useless group in pattern.
{disable-failing-tests}: Remove phase.
{build-and-install-html-doc}: Order after the build phase.
[home-page]: Please 'guix lint'.

Reported-by: Simon Tournier <zimon.toutoune@gmail.com>
2021-03-16 07:46:20 -04:00
Léo Le Bouter 097cf21d1d
gnu: Remove MongoDB.
mongodb 3.4.10 has unpatched CVEs and mongodb 3.4.24 has some files in the
release tarball under the SSPL, therefore we cannot provide mongodb while
upholding to good security standards.

It turns out feff80cec3 was right since while
the main license file wasnt altered to SSPL, some files in the tree contain
SSPL headers.

* gnu/packages/databases.scm (go-gopkg.in-mgo.v2): Remove.
* gnu/packages/databases.scm (mongo-tools): Remove.
* doc/guix.texi (mongodb-service-type): Remove.
* gnu/tests/databases.scm (%test-mongodb, %mongodb-os, run-mongodb-test):
Remove.
* gnu/services/databases.scm (mongodb-configuration, mongodb-configuration?,
mongodb-configuration-mongodb, mongodb-configuration-config-file,
mongodb-configuration-data-directory, mongodb-service-type,
%default-mongodb-configuration-file, %mongodb-accounts, mongodb-activation,
mongodb-shepherd-service): Remove.
* gnu/packages/databases.scm (mongodb): Remove.
2021-03-16 11:05:24 +01:00
Efraim Flashner aa983626a2
gnu: mongodb: Update comment about package license.
* gnu/packages/databases.scm (mongodb): Adjust the comment about the
licensing status of the package, there are still older branches
receiving updates under the AGPL license.
2021-03-11 23:26:01 +02:00
Efraim Flashner 2f9132e2e0
Revert "Revert "gnu: mongodb: Update to 3.4.24 [security fixes].""
This reverts commit feff80cec3.

I was mistaken, there are still branches of mongodb which are still
licensed under the AGPL3
2021-03-11 23:23:00 +02:00
Efraim Flashner f197964689
gnu: mongodb: Add comment about future package versions.
* gnu/packages/databases.scm (mongodb): Add comment that the license of
the package changed after the packaged version and that it shouldn't be
updated.
2021-03-11 15:17:26 +02:00