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12 Commits (0b7c540032e85fdf69547ca18a4f0294c813c72e)

Author SHA1 Message Date
Ricardo Wurmus 5db8ba1f49
gnu: Add python-msgpack-numpy. 
* gnu/packages/python-science.scm (python-msgpack-numpy): New variable.
 2020-06-23 23:15:54 +02:00
Ricardo Wurmus 4be49afabd
gnu: python-scikit-image: Update to 0.17.2. 
* gnu/packages/python-science.scm (python-scikit-image): Update to 0.17.2.
 2020-06-23 23:15:54 +02:00
Pierre Langlois 3417a25156
gnu: Add python-xarray. 
From 27ec21904f769c1e8114f767972d9037e1e9f68a Mon Sep 17 00:00:00 2001
From: Pierre Langlois <pierre.langlois@gmx.com>
Date: Thu, 18 Jun 2020 00:58:02 +0200
Subject: [PATCH 4/5] gnu: Add python-xarray.

* gnu/package/python-science.scm (python-xarray): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-06-22 15:44:14 +02:00
Pierre Langlois 20b545f768
gnu: python-pandas: Update to 1.0.5. 
But also keep version 0.25.3 around for packages requiring an earlier
versions, as well as version 0.24.2 for a version with python2.

* gnu/packages/python-science.scm (python-pandas): Update to 1.0.5.
[arguments]: Adapt 'patch-which phase.  Add new 'prepare-x phase.  Do not
delete tests that depend on "moto", they are skipped automatically.
[propagated-inputs]: Add python-jinja2.
[inputs]: Add xsel and xclip.
[native-inputs]: Add xorg-server-for-tests so we can test clipboard support.
(python-pandas-0.24): New variable.
(python2-pandas): Inherit from python-pandas-0.25.
* gnu/packages/bioinformatics.scm (python-biom-format)[propagated-inputs]:
Switch to python-pandas-0.25.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-06-22 15:44:08 +02:00
Ricardo Wurmus ed33317893
gnu: Add python2-weave. 
* gnu/packages/python-science.scm (python2-weave): New variable.
 2020-04-30 13:08:33 +02:00
Marius Bakke 68cda767df
gnu: Remove python2-scikit-image. 
Some of the packages that this depends upon no longer supports Python 2.

* gnu/packages/python-science.scm (python2-scikit-image): Remove variable.
 2020-04-09 20:04:44 +02:00
Marius Bakke 3987715415
gnu: python2-pandas: Fix build with Python 2.7.17. 
While at it, fix the inheritance.

* gnu/packages/python-science.scm (python2-pandas): Use INHERIT instead of
PACKAGE/INHERIT.
[source](modules, snippet): New fields.
 2020-03-15 15:09:06 +01:00
Tobias Geerinckx-Rice 082c733c1d
gnu: python-scikit-image: Use HTTPS home page. 
* gnu/packages/python-science.scm (python-scikit-image)[home-page]: Use HTTPS.
 2020-02-19 23:48:15 +01:00
Marius Bakke 55e1475cb5
gnu: python-lxml: Move to (gnu packages xml). 
* gnu/packages/python-xyz.scm (python-lxml): Move from here ...
* gnu/packages/xml.scm (python-lxml): ... to here.
* gnu/packages/django.scm, gnu/packages/drones.scm,
gnu/packages/libreoffice.scm, gnu/packages/nutrition.scm,
gnu/packages/openstack.scm, gnu/packages/pulseaudio.scm,
gnu/packages/python-science.scm, gnu/packages/tryton.scm,
gnu/packages/wireservice.scm: Adjust module imports.
 2020-01-15 20:36:34 +01:00
Ricardo Wurmus 312ec128af
gnu: python-pandas: Move to (gnu packages python-science). 
* gnu/packages/python-xyz.scm (python-pandas, python2-pandas): Move from
here...
* gnu/packages/python-science.scm (python-pandas, python2-pandas): ...to here.
* gnu/packages/benchmark.scm, gnu/packages/databases.scm,
gnu/packages/graph.scm, gnu/packages/parallel.scm,
gnu/packages/serialization.scm: Import (gnu packages python-science).
 2019-12-04 08:56:36 +01:00
Ricardo Wurmus ec1224a73b
gnu: python-scipy: Move to (gnu packages python-science). 
* gnu/packages/python-xyz.scm (python-scipy, python2-scipy): Move these from
here...
* gnu/packages/python-science.scm (python-scipy, python2-scipy): ...to here.
* gnu/packages/bioinformatics.scm, gnu/packages/machine-learning.scm,
gnu/packages/statistics.scm: Adjust module imports.
 2019-12-02 15:25:17 +01:00
Ricardo Wurmus ca7c365312
gnu: python-scikit-image: Move to (gnu packages python-science). 
* gnu/packages/python-xyz.scm (python-scikit-image, python2-scikit-image):
Move these two from here...
* gnu/packages/python-science.scm: ...to this new file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
 2019-12-02 15:25:12 +01:00