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Author SHA1 Message Date
Ricardo Wurmus 6dc964cc19
gnu: r-pixmap: Update to 0.4-13.
* gnu/packages/cran.scm (r-pixmap): Update to 0.4-13.

Change-Id: Ia2270efb3fb0607cf9095b308673dcee1d04df32
2024-05-08 12:53:42 +02:00
Ricardo Wurmus 52b495538d
gnu: r-gridpattern: Update to 1.2.1.
* gnu/packages/cran.scm (r-gridpattern): Update to 1.2.1.

Change-Id: Ib5f335fb1341df372aa85f1fc658509b4006045a
2024-05-08 12:53:42 +02:00
Ricardo Wurmus a5206d48fe
gnu: r-biocmanager: Update to 1.30.23.
* gnu/packages/cran.scm (r-biocmanager): Update to 1.30.23.

Change-Id: Ie6bd5daa07a9d9b3f120563735126a70ed0f882a
2024-05-08 12:53:42 +02:00
Ricardo Wurmus 909b50265d
gnu: r-xopen: Update to 1.0.1.
* gnu/packages/cran.scm (r-xopen): Update to 1.0.1.

Change-Id: Ib6a2cf9f4ab8103277d43f45c5c4379bbb61894e
2024-05-08 12:53:42 +02:00
Ricardo Wurmus 7cf39c3ed4
gnu: r-fs: Update to 1.6.4.
* gnu/packages/cran.scm (r-fs): Update to 1.6.4.

Change-Id: I1611b167864d37b1ff9249727f7e272ce10c103d
2024-05-08 12:53:42 +02:00
Ricardo Wurmus cbc2125aa3
gnu: r-labelled: Update to 2.13.0.
* gnu/packages/cran.scm (r-labelled): Update to 2.13.0.
[propagated-inputs]: Add r-tidyselect.

Change-Id: I0fa1bd6fdd76fbf3900103c00310925662b359f5
2024-05-08 12:53:42 +02:00
Ricardo Wurmus ff52e6b37a
gnu: r-doby: Update to 4.6.21.
* gnu/packages/cran.scm (r-doby): Update to 4.6.21.
[propagated-inputs]: Remove r-magrittr; add r-boot, r-cowplot, r-modelr, r-rlang, and
r-tidyr.

Change-Id: I11a033414510a6ce09863eb69e27186471e85856
2024-05-08 12:53:42 +02:00
Ricardo Wurmus 5c988ff569
gnu: r-flextable: Update to 0.9.6.
* gnu/packages/cran.scm (r-flextable): Update to 0.9.6.

Change-Id: Ib61b62ddb06d1eaea5b5a0cfa9ebfea381337190
2024-05-08 12:53:42 +02:00
Ricardo Wurmus 9a343e53a9
gnu: r-prediction: Update to 0.3.17.
* gnu/packages/cran.scm (r-prediction): Update to 0.3.17.

Change-Id: Idf811d30e662c4ed25c1d4d9f0ead292b709957b
2024-05-08 12:53:42 +02:00
Ricardo Wurmus 8f7f134a57
gnu: r-officer: Update to 0.6.6.
* gnu/packages/cran.scm (r-officer): Update to 0.6.6.

Change-Id: I2758460e3c1eb7f020530431d191970d4ecc6f22
2024-05-08 12:53:42 +02:00
Ricardo Wurmus b778d59156
gnu: r-rapiclient: Update to 0.1.4.
* gnu/packages/cran.scm (r-rapiclient): Update to 0.1.4.

Change-Id: I1c637b91a9463b2e8dd0f85fe80c89b41914ee79
2024-05-08 12:53:42 +02:00
Ricardo Wurmus 8849663588
gnu: r-tinytex: Update to 0.51.
* gnu/packages/cran.scm (r-tinytex): Update to 0.51.

Change-Id: Ia99bf297807fff8aaf5e3e7ec7eafe96b541dec2
2024-05-08 12:53:42 +02:00
Ricardo Wurmus ad7d89daef
gnu: r-debugme: Update to 1.2.0.
* gnu/packages/cran.scm (r-debugme): Update to 1.2.0.

Change-Id: I0a43ead356a49e59506be73ec7e449813e8e1dc6
2024-05-08 12:53:41 +02:00
Ricardo Wurmus f560edf277
gnu: r-ips: Update to 0.0.12.
* gnu/packages/cran.scm (r-ips): Update to 0.0.12.
[propagated-inputs]: Remove r-seqinr; add r-data-table.

Change-Id: I948da8f5d5e4813096db71560a2aead3003cec06
2024-05-08 12:53:41 +02:00
Ricardo Wurmus 88ac0306d5
gnu: r-evd: Update to 2.3-7.
* gnu/packages/cran.scm (r-evd): Update to 2.3-7.

Change-Id: I6009ea9eb4138fd25542ef8c4bc1e51c60a257ab
2024-05-08 12:53:41 +02:00
Ricardo Wurmus be22689e75
gnu: r-sp: Update to 2.1-4.
* gnu/packages/cran.scm (r-sp): Update to 2.1-4.

Change-Id: Id4d21cf39ac47dba310f16d26d294ec314925b45
2024-05-08 12:53:41 +02:00
Ricardo Wurmus 1b6f915a88
gnu: r-rcppspdlog: Update to 0.0.17.
* gnu/packages/cran.scm (r-rcppspdlog): Update to 0.0.17.

Change-Id: I2558509ee09e4a732e8a2aaf1addab22375f4d85
2024-05-08 12:53:41 +02:00
Ricardo Wurmus 6f95883d01
FIXUP r-infercnv
Change-Id: I94a80f498afb34052dc4b2c3394fd94a463241bc
2024-05-08 12:53:41 +02:00
Ricardo Wurmus 5ad635ec49
gnu: r-job: Update to 0.3.1.
* gnu/packages/cran.scm (r-job): Update to 0.3.1.

Change-Id: I3c47b59da4d497df1ef4b19d85bf8cc1b618295d
2024-05-08 12:53:41 +02:00
Ricardo Wurmus 40529de4f9
gnu: r-secretbase: Update to 0.5.0.
* gnu/packages/cran.scm (r-secretbase): Update to 0.5.0.

Change-Id: Ia0a2d14a98e43ef68794d7204fc6e60dfcf76fde
2024-05-08 12:53:41 +02:00
Ricardo Wurmus 21c96d6d03
gnu: r-mboost: Update to 2.9-10.
* gnu/packages/cran.scm (r-mboost): Update to 2.9-10.

Change-Id: I68b980e21438220989258c0d98791ab25e9211a6
2024-05-08 12:53:41 +02:00
Ricardo Wurmus c6d4cc67ec
gnu: r-oompadata: Update to 3.1.4.
* gnu/packages/cran.scm (r-oompadata): Update to 3.1.4.

Change-Id: Id09f253cd6e62032fb6ffb90a776d3dfece8675b
2024-05-08 12:53:41 +02:00
Ricardo Wurmus 80ead87638
gnu: r-ggpp: Update to 0.5.7.
* gnu/packages/cran.scm (r-ggpp): Update to 0.5.7.
[propagated-inputs]: Add r-vctrs.

Change-Id: Ib8e2ddcdd38a943183fa349eabdeef8db625566f
2024-05-08 12:53:41 +02:00
Ricardo Wurmus e76b664a36
gnu: r-brio: Update to 1.1.5.
* gnu/packages/cran.scm (r-brio): Update to 1.1.5.

Change-Id: I8cad71c2d24161c268698ac4fe72d910b81f034e
2024-05-08 12:53:41 +02:00
Ricardo Wurmus 7ba06e0c7b
gnu: r-classdiscovery: Update to 3.4.5.
* gnu/packages/bioconductor.scm (r-classdiscovery): Update to 3.4.5.

Change-Id: I8f712ffb99ff1fc94edf7095bb66ba10184843da
2024-05-08 12:53:41 +02:00
Ricardo Wurmus c35e5cecbc
gnu: r-valr: Update to 0.8.1.
* gnu/packages/bioconductor.scm (r-valr): Update to 0.8.1.

Change-Id: I66b405f9baecdf7e11187748241d553614a39269
2024-05-08 12:53:41 +02:00
Ricardo Wurmus 8182017710
gnu: r-scgate: Update to 1.6.2.
* gnu/packages/bioconductor.scm (r-scgate): Update to 1.6.2.

Change-Id: I7c1d1884a07db5b6dcf0475fa524cde98297b62c
2024-05-08 12:53:41 +02:00
Ricardo Wurmus aebf218eb7
gnu: r-phyloseq: Update to 1.48.0.
* gnu/packages/bioconductor.scm (r-phyloseq): Update to 1.48.0.

Change-Id: I6e9204c00ab56f6d1441ab15a01d9680de368e9e
2024-05-08 12:53:41 +02:00
Ricardo Wurmus 23535051f4
gnu: r-tximeta: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.22.0.
[propagated-inputs]: Add r-txdbmaker.

Change-Id: I1a87fadeb0cef5687abc3be91517c7cdcfaa950d
2024-05-08 12:53:41 +02:00
Ricardo Wurmus 55d89a17f9
gnu: r-tricycle: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-tricycle): Update to 1.12.0.

Change-Id: I469d3387d52cce2d443e08ca21f3c18334c7b1f1
2024-05-08 12:53:41 +02:00
Ricardo Wurmus 7dd229853b
gnu: r-tcgabiolinks: Update to 2.32.0.
* gnu/packages/bioconductor.scm (r-tcgabiolinks): Update to 2.32.0.

Change-Id: I8ea8c5b220a262e921bcc4448b039153d48ad5c8
2024-05-08 12:53:41 +02:00
Ricardo Wurmus 3ea719d1bf
gnu: r-biscuiteer: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-biscuiteer): Update to 1.18.0.

Change-Id: If9119ebcde80e8548df5bcd4ffab1b0dca4ca726
2024-05-08 12:53:41 +02:00
Ricardo Wurmus 4689ba62f5
gnu: r-omnipathr: Update to 3.11.10.
* gnu/packages/bioconductor.scm (r-omnipathr): Update to 3.11.10.

Change-Id: I3e93662d106c84cbe611f788f2c16f5caa748fbc
2024-05-08 12:53:41 +02:00
Ricardo Wurmus a37cf20566
gnu: r-omicade4: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-omicade4): Update to 1.44.0.

Change-Id: Iace759b9cc18c774f8a595f5ae05aa7256078901
2024-05-08 12:53:40 +02:00
Ricardo Wurmus 74d8555fc0
gnu: r-dmrseq: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-dmrseq): Update to 1.24.0.

Change-Id: Ia0a2aff28eb12c730933c81a1afe203805c51a25
2024-05-08 12:53:40 +02:00
Ricardo Wurmus b138e6fc5b
gnu: r-dada2: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-dada2): Update to 1.32.0.

Change-Id: I6e8764f77d05923b3534aff1388bf021491118fe
2024-05-08 12:53:40 +02:00
Ricardo Wurmus 7cb5aac097
gnu: r-bsseq: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-bsseq): Update to 1.40.0.

Change-Id: If2cb52db5144dd8c625d428c7a83736d0eb9ce68
2024-05-08 12:53:40 +02:00
Ricardo Wurmus 73a75b1a72
gnu: r-biotmle: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-biotmle): Update to 1.28.0.

Change-Id: Idd65b115b561e4069470133fdf70da803b7e463e
2024-05-08 12:53:40 +02:00
Ricardo Wurmus 65a3deae8c
gnu: r-bioqc: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-bioqc): Update to 1.32.0.

Change-Id: If59869b7ced6952d277b9fb45a25bd903abb9bb2
2024-05-08 12:53:40 +02:00
Ricardo Wurmus 84047fe00d
gnu: r-bionet: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-bionet): Update to 1.64.0.

Change-Id: I3a66573dfe5b4a2758bea8e7af6a05b22a14b218
2024-05-08 12:53:40 +02:00
Ricardo Wurmus 7315d4d4e1
gnu: r-bionero: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-bionero): Update to 1.12.0.

Change-Id: I17d7d7bab2ea647e5a49c8f8482251dac34edda2
2024-05-08 12:53:40 +02:00
Ricardo Wurmus 3150174b01
gnu: r-biomvrcns: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-biomvrcns): Update to 1.44.0.

Change-Id: I7a392cab724c7757b4e41e472fd9644031674ddb
2024-05-08 12:53:40 +02:00
Ricardo Wurmus 65e8360b94
gnu: r-biomvcclass: Update to 1.72.0.
* gnu/packages/bioconductor.scm (r-biomvcclass): Update to 1.72.0.

Change-Id: I64be6be30c5a64517cc285842b438a9bbfd9b463
2024-05-08 12:53:40 +02:00
Ricardo Wurmus f6436cd8cc
gnu: r-mvcclass: Update to 1.78.0.
* gnu/packages/bioconductor.scm (r-mvcclass): Update to 1.78.0.

Change-Id: Ib40c3da90a3a77dbac7563eb1c3053669069325c
2024-05-08 12:53:40 +02:00
Ricardo Wurmus d310e9ea81
gnu: r-biomformat: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-biomformat): Update to 1.32.0.

Change-Id: I6d789e28a5f87ed6af111c20346c388e00f75697
2024-05-08 12:53:40 +02:00
Ricardo Wurmus f8cb2a50dc
gnu: r-biodb: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-biodb): Update to 1.12.0.

Change-Id: If7001f4b7fd5393a45799562d2ece279e0a60215
2024-05-08 12:53:40 +02:00
Ricardo Wurmus 5748d5c626
gnu: r-biocthis: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-biocthis): Update to 1.14.0.

Change-Id: I1ee87d7a43237325ee4c4d93d9f69f0c3764a13b
2024-05-08 12:53:40 +02:00
Ricardo Wurmus 5090b976d5
gnu: r-bcrank: Update to 1.66.0.
* gnu/packages/bioconductor.scm (r-bcrank): Update to 1.66.0.

Change-Id: I33ab9ad800c550b90268e7382ca1237874ca8d86
2024-05-08 12:53:40 +02:00
Ricardo Wurmus a791fbd1a3
gnu: r-bbcanalyzer: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-bbcanalyzer): Update to 1.34.0.

Change-Id: I14da55ec9487fe641aac8e7e85708253afc1bc83
2024-05-08 12:53:40 +02:00
Ricardo Wurmus 856c5c775f
gnu: r-baynorm: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-baynorm): Update to 1.22.0.

Change-Id: I49339ce8e370d45a1c2b018d14dc38a2ce1a8fef
2024-05-08 12:53:40 +02:00