6a5e5bb9e2
gnu: r-biodb: Update to 1.2.1.
...
* gnu/packages/bioconductor.scm (r-biodb): Update to 1.2.1.
2021-11-18 13:18:01 +00:00
13f8140290
gnu: r-chromstar: Update to 1.20.2.
...
* gnu/packages/bioconductor.scm (r-chromstar): Update to 1.20.2.
2021-11-18 13:18:00 +00:00
34d17d5f62
gnu: r-scran: Update to 1.22.1.
...
* gnu/packages/bioconductor.scm (r-scran): Update to 1.22.1.
2021-11-18 13:18:00 +00:00
0f72bdada5
gnu: r-hdf5array: Update to 1.22.1.
...
* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.22.1.
2021-11-18 13:18:00 +00:00
ddb9d228b4
gnu: r-s4vectors: Update to 0.32.2.
...
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.32.2.
2021-11-18 13:18:00 +00:00
ef5bbc3416
gnu: r-biocset: Update to 1.8.1.
...
* gnu/packages/bioconductor.scm (r-biocset): Update to 1.8.1.
2021-11-18 13:18:00 +00:00
3cfeeace83
gnu: r-biocpkgtools: Update to 1.12.2.
...
* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.12.2.
2021-11-18 13:17:59 +00:00
6350413325
gnu: r-mixomics: Update to 6.18.0.
...
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.18.0.
2021-11-18 13:17:59 +00:00
a03c84244d
gnu: r-rsubread: Update to 2.8.1.
...
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.8.1.
2021-11-18 13:17:59 +00:00
d30d9c6001
gnu: r-geoquery: Update to 2.62.1.
...
* gnu/packages/bioconductor.scm (r-geoquery): Update to 2.62.1.
[propagated-inputs]: Add r-r-utils.
2021-11-18 13:17:59 +00:00
f4b108d872
gnu: r-icobra: Update to 1.22.1.
...
* gnu/packages/bioconductor.scm (r-icobra): Update to 1.22.1.
2021-11-18 13:17:58 +00:00
7e9a13d789
gnu: r-ggtree: Update to 3.2.1.
...
* gnu/packages/bioconductor.scm (r-ggtree): Update to 3.2.1.
2021-11-18 13:17:58 +00:00
e52eb93765
gnu: r-treeio: Update to 1.18.1.
...
* gnu/packages/bioconductor.scm (r-treeio): Update to 1.18.1.
2021-11-18 13:17:58 +00:00
34ba8b256b
gnu: r-systempiper: Update to 2.0.1.
...
* gnu/packages/bioconductor.scm (r-systempiper): Update to 2.0.1.
2021-11-18 13:17:58 +00:00
6b1375d3af
gnu: r-msnbase: Update to 2.20.1.
...
* gnu/packages/bioconductor.scm (r-msnbase): Update to 2.20.1.
2021-11-18 13:17:58 +00:00
f917fa4e50
gnu: r-ensembldb: Update to 2.18.2.
...
* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.18.2.
2021-11-18 13:17:57 +00:00
30038c5738
gnu: r-chipseeker: Update to 1.30.2.
...
* gnu/packages/bioconductor.scm (r-chipseeker): Update to 1.30.2.
2021-11-18 13:17:57 +00:00
443ed83bc3
gnu: r-annotationdbi: Update to 1.56.2.
...
* gnu/packages/bioconductor.scm (r-annotationdbi): Update to 1.56.2.
2021-11-18 13:17:57 +00:00
f66da037b4
tests: Replace texlive importer tests.
...
* tests/texlive.scm (xml, sxml): Remove variables.
("fetch-sxml: returns SXML for valid XML", "sxml->package"): Remove tests.
("texlive->guix-package"): Add new test.
2021-11-18 13:17:57 +00:00
424f2c92b4
import: texlive: Take different package database as optional argument.
...
* guix/import/texlive.scm (tlpdb->package): Expect PACKAGE-DATABASE as
argument.
(texlive->guix-package): Accept PACKAGE-DATABASE keyword.
2021-11-18 13:17:57 +00:00
a030511fd9
import: texlive: Print inputs with labels and guixified names.
...
* guix/import/texlive.scm (tlpdb->package): Improve handling of propagated-inputs.
2021-11-18 13:17:56 +00:00
039c3848c3
gnu: wireshark: Update to 3.4.10.
...
* gnu/packages/networking.scm (wireshark): Update to 3.4.10.
2021-11-18 09:18:41 +01:00
f4aa543f74
gnu: emacs-elfeed-score: Update to 1.2.0.
...
* gnu/packages/emacs-xyz.scm (emacs-elfeed-score): Update to 1.2.0.
2021-11-18 09:13:22 +01:00
7537ec816f
gnu: coq-stdpp: Adjust '#:make-flags'.
...
* gnu/packages/coq.scm (coq-stdpp)[arguments]<#:make-flags>: Set install
destination.
<#:phases>: Remove replace 'install.
Signed-off-by: Julien Lepiller <julien@lepiller.eu>
2021-11-18 04:30:41 +01:00
4423caece6
gnu: coq-equations: Adjust '#:make-flags'.
...
* gnu/packages/coq.scm (coq-equations)[arguments]<#:make-flags>: Set install
destination.
<#:phases>: Remove replace 'install.
Signed-off-by: Julien Lepiller <julien@lepiller.eu>
2021-11-18 04:25:38 +01:00
5d7d64ff85
gnu: coq-autosubst: Adjust '#:make-flags'.
...
* gnu/packages/coq.scm (coq-autosubst)[arguments]<#:make-flags>: Set install
destination.
<#:phases>: Remove replace 'install.
Signed-off-by: Julien Lepiller <julien@lepiller.eu>
2021-11-18 04:22:21 +01:00
7b93c6d777
gnu: coq-mathcomp: Adjust '#:make-flags'.
...
* gnu/packages/coq.scm (coq-mathcomp)[arguments]<#:make-flags>: Set install
destination.
<#:phases>: Remove replace 'install.
Signed-off-by: Julien Lepiller <julien@lepiller.eu>
2021-11-18 04:08:08 +01:00
2d60af4d6d
gnu: Add coq-semantics.
...
* gnu/packages/coq.scm (coq-semantics): New variable.
Signed-off-by: Julien Lepiller <julien@lepiller.eu>
2021-11-18 04:08:00 +01:00
e930d4a747
gnu: perl-tie-handle-offset: Fix typo.
...
* gnu/packages/perl.scm (perl-tie-handle-offset)[description]: Fix "This
module" typo.
2021-11-17 17:46:13 -08:00
67900b9555
gnu: perl-business-ismn: Fix typo.
...
* gnu/packages/perl.scm (perl-business-ismn)[description]: Fix "This module"
typo.
2021-11-17 17:46:05 -08:00
e52032ac1d
gnu: perl-business-issn: Fix typo.
...
* gnu/packages/perl.scm (perl-business-issn)[description]: Fix "This module"
typo.
2021-11-17 17:46:01 -08:00
f4f93b38aa
gnu: perl-business-isbn: Fix typo.
...
* gnu/packages/perl.scm (perl-business-isbn)[description]: Fix "This module"
typo.
2021-11-17 17:45:53 -08:00
8f6ac12fe4
gnu: perl-test-dir: Fix typo.
...
* gnu/packages/perl-check.scm (perl-test-dir)[description]: Fix "This module"
typo.
2021-11-17 17:45:49 -08:00
e782bb901b
gnu: python-sgmllib3k: Fix typo.
...
* gnu/packages/python-xyz.scm (python-sgmllib3k)[description]: Fix "This
package" typo.
2021-11-17 17:45:45 -08:00
fb1cd494d7
gnu: rust-fever-api-0.2: Fix typo.
...
* gnu/packages/crates-io.scm (rust-fever-api-0.2)[description]: Fix "This
package" typo.
2021-11-17 17:45:38 -08:00
747403aca5
gnu: perl-test-nowarnings: Fix typo.
...
* gnu/packages/perl-check.scm (perl-test-nowarnings)[description]: Fix "This
module" typo.
2021-11-17 17:45:21 -08:00
407594d21b
gnu: foo2zjs: Use archived home page.
...
* gnu/packages/cups.scm (foo2zjs)[home-page]: Link to the Web Archive'd
URL.
2021-11-18 01:12:21 +01:00
90c524c94e
gnu: sg3-utils: Omit static library.
...
* gnu/packages/scsi.scm (sg3-utils)[arguments]: Add "--disable-static"
to #:configure-flags.
2021-11-18 01:12:15 +01:00
f41fbda9db
gnu: sg3-utils: Update to 1.47.
...
* gnu/packages/scsi.scm (sg3-utils): Update to 1.47.
2021-11-18 01:08:30 +01:00
e3f70c947f
gnu: ungoogled-chromium: Update to 96.0.4664.45-0.
...
* gnu/packages/chromium.scm (%preserved-third-party-files): Adjust for M96.
(%chromium-version): Set to 96.0.4664.45.
(%ungoogled-origin, ungoogled-chromium): Update hashes.
2021-11-17 23:57:52 +01:00
b432cd1189
gnu: libtorrent-rasterbar: Update to 1.2.14.
...
* gnu/packages/bittorrent.scm (libtorrent-rasterbar): Update to 1.2.14.
[source](uri): Adjust tag name.
[build-system]: Change to CMAKE-BUILD-SYSTEM.
[arguments]: Adjust accordingly. Override the check phase to fake the time
for one test, and disable another.
[native-inputs]: Add LIBFAKETIME.
2021-11-17 23:57:52 +01:00
94fbcf7b78
gnu: Add rcs-blame.
...
* gnu/packages/version-control.scm (rcs-blame): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-11-17 23:05:59 +01:00
b737607c54
gnu: rcs: Install rcsfreeze.
...
* gnu/packages/version-control.scm (rcs): Install rcsfreeze.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-11-17 23:05:58 +01:00
7c4142628a
gnu: system: Improve location of some configuration warnings.
...
* gnu/bootloader.scm (%warn-target-field-deprecation): Remove it.
* gnu/bootloader.scm (warn-target-field-deprecation): Use
define-with-syntax-properties.
* gnu/system.scm (ensure-setuid-program-list): Ditto. Also rename the
'location' variable to 'properties'.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-11-17 23:05:58 +01:00
346d2f6488
diagnostics: Add syntax to capture arguments' syntax-properties.
...
* guix/diagnostics.scm (define-with-syntax-properties): Add it.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-11-17 23:05:58 +01:00
fa67d6eef6
doc: Improve wording for param spec of `./configure`.
...
* doc/contributing.texi (Running Guix Before It Is Installed): Writing "Do
<this>. But it won't work unless ..." is a bad practice.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-11-17 23:05:58 +01:00
cb768f3860
gnu: tidy-html: Update to 5.8.0.
...
* gnu/packages/web.scm (tidy-html): Update to 5.8.0.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-11-17 23:05:58 +01:00
f5fc395ab4
scripts: home: Make ‘guix home import’ write home-configuration.scm.
...
* guix/scripts/home.scm (process-command): Populate ‘home-configuration.scm’
in the destination directory instead of printing to stdout.
* doc/guix.texi (Declaring the Home Environment): Adjust accordingly.
(Invoking guix home): Likewise.
Suggested-by: Ludovic Courtès <ludo@gnu.org>
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2021-11-17 23:05:58 +01:00
609066e996
gnu: xfce4-whiskermenu-plugin: Update to 2.6.1.
...
* gnu/packages/xfce.scm (xfce4-whiskermenu-plugin): Update to 2.6.1.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-11-17 23:05:57 +01:00
7fe5742e03
gnu: ristretto: Update to 0.12.0.
...
* gnu/packages/xfce.scm (ristretto): Update to 0.12.0.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-11-17 23:05:57 +01:00
Ricardo Wurmus
Nicolas Goaziou
zimoun
Vagrant Cascadian
Tobias Geerinckx-Rice
Marius Bakke
Foo Chuan Wei
Josselin Poiret
Rostislav Svoboda
Philip McGrath
Xinglu Chen
Michael Rohleder