b7392ecbba
gnu: ikiwiki: Propagate some inputs.
...
* gnu/packages/web.scm (ikiwiki)[inputs]: Move perl-html-parser,
perl-html-scrubber, perl-html-template, perl-json,
perl-text-markdown-discount, perl-uri and perl-yaml-libyaml to...
[propagated-inputs]: ...here. New field.
2020-04-29 09:37:12 +01:00
732ffac3bc
gnu: ikiwiki: Build perl inputs for target architecture.
...
* gnu/packages/web.scm (ikiwiki)[native-inputs]: Move perl dependencies ...
[inputs]: ...to here.
2020-04-29 09:37:11 +01:00
add3e168bb
gnu: ikiwiki: Fetch sources from git repository.
...
* gnu/packages/web.scm (ikiwiki)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
[source](snippet): New field.
[arguments]<#:phases>[set-modification-times]: New phase.
2020-04-29 09:36:29 +01:00
cf480830e2
gnu: gnuradio: Fix search paths for third-party blocks.
...
* gnu/packages/radio.scm (gnuradio)[native-search-paths]: Add definition of
the GRC_BLOCKS_PATH variable.
2020-04-29 10:23:23 +02:00
be3abf28af
tests: install: Fix gui-installed-os test.
...
This is a follow-up of a860eddbbd
2020-04-29 10:12:55 +02:00
ae1a0f7583
tests: install: Increase virtual machine RAM.
...
It seems that 'guix system init' is consuming more than the 800M of RAM
currently allocated. Until this is understood, bump the limit to 1.2G.
Reported here:
https://lists.gnu.org/archive/html/bug-guix/2020-04/msg00519.html
* gnu/tests/install.scm (run-install): Bump RAM to 1.2G.
2020-04-29 10:08:54 +02:00
f93eebbf9c
gnu: Add xnec2c.
...
* gnu/packages/radio.scm (xnec2c): New variable.
2020-04-29 01:17:37 +02:00
1797fe1321
gnu: guile-json: Update to 3.5.0.
...
* gnu/packages/guile.scm (guile-json-3): Update to 3.5.0.
2020-04-28 23:28:17 +02:00
ce0f1b1eef
gnu: guix: Update to 619f918.
...
* gnu/packages/package-management.scm (guix): Update to 619f918
2020-04-28 23:28:17 +02:00
0b25812872
gnu: openldap: Fix CVE-2020-12243.
...
* gnu/packages/openldap.scm (openldap)[replacement]: New field.
(openldap/fixed): New variable.
* gnu/packages/patches/openldap-CVE-2020-12243.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2020-04-28 22:52:20 +03:00
cd8c419722
gnu: valgrind: Update source uri.
...
* gnu/packages/valgrind.scm (valgrind)[source]: Remove valgrind host,
add sourceware host.
[home-page]: Use https.
2020-04-28 22:33:40 +03:00
27112236ce
gnu: sbcl: Update to 2.0.4.
...
* gnu/packages/lisp.scm (sbcl): Update to 2.0.4.
2020-04-28 21:10:46 +02:00
a84b7a4af5
gnu: sbcl-parenscript: Update to 2.7.1.
...
* gnu/packages/lisp-xyz.scm (sbcl-parenscript): Update to 2.7.1.
2020-04-28 21:10:46 +02:00
19e1f12ce4
gnu: emacs-telega: Test Emacs environment on startup.
...
Print a more helpful error message when someone attempts to run Telega on an
incompatible Emacs (e.g a 32-bit Emacs without wide ints).
* gnu/packages/patches/emacs-telega-test-env.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/emacs-xyz.scm (emacs-telega)[source]: Use it.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-04-28 20:44:30 +03:00
a663b7040c
gnu: emacs-telega: Build with emacs-wide-int on 32-bit systems.
...
Fixes <https://bugs.gnu.org/39406 >.
Reported by <lmedeiros@riseup.net>.
* gnu/packages/emacs-xyz.scm (emacs-telega)[native-inputs]: Replace emacs with
emacs-wide-int on 32-bit systems. This is needed because Telega requires
64-bit wide ints.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-04-28 20:44:30 +03:00
abbca232ca
gnu: Add emacs-wide-int.
...
* gnu/packages/emacs.scm (emacs-wide-int): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-04-28 20:44:27 +03:00
b2c1d4a273
gnu: Add emacs-magit-annex.
...
* gnu/packages/emacs-xyz.scm (emacs-magit-annex): New variable.
2020-04-28 12:30:41 -04:00
ae0f26b8f4
gnu: lv2: Update to 1.18.0.
...
* gnu/packages/audio.scm (lv2): Update to 1.18.0.
Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>
2020-04-28 18:20:28 +02:00
3b33e0e4ba
gnu: kakoune: Update to 2020.01.16.
...
* gnu/packages/text-editors.scm (kakoune): Update to 2020.01.16.
2020-04-28 18:18:44 +02:00
9615c8511f
gnu: emacs-evil-org: Update to 1.0.2.
...
* gnu/packages/emacs-xyz.scm (emacs-evil-org): Update to 1.0.2.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-04-28 17:30:50 +02:00
f15d324afa
gnu: emacs-sx: Update to 20191229.
...
* gnu/packages/emacs-xyz.scm (emacs-sx): Update to 20191229.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-04-28 17:29:51 +02:00
b3d04190f4
gnu: Add emacs-toml-mode.
...
* gnu/packages/emacs-xyz.scm (emacs-toml-mode): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-04-28 17:27:47 +02:00
085948fbfc
gnu: ungoogled-chromium: Update to 81.0.4044.129-0.c2a89fb [security fixes].
...
This fixes CVE-2020-6462 and CVE-2020-6461.
* gnu/packages/chromium.scm (%chromium-version): Set to 81.0.4044.129.
(%ungoogled-revision): Set to c2a89fb6b5b559c826796c811741fa8ed3e11de8.
(%chromium-origin, %ungoogled-origin): Update hashes.
2020-04-28 14:38:38 +02:00
545e12f40d
gnu: Add variant-tools.
...
* gnu/packages/bioinformatics.scm (variant-tools): New variable.
2020-04-28 12:23:28 +02:00
0b2c883828
gnu: Add hdf5-blosc.
...
* gnu/packages/maths.scm (hdf5-blosc): New variable.
2020-04-28 12:23:28 +02:00
9a2fcb6325
gnu: Add c-blosc.
...
* gnu/packages/compression.scm (c-blosc): New variable.
2020-04-28 12:23:28 +02:00
83812f34d7
gnu: Add kbdd-0.7.1
...
* gnu/packages/xdisorg.scm (kbdd): New variable.
Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>
2020-04-28 11:51:06 +02:00
8ac4be51de
gnu: ecl: Update to 20.4.24.
...
* gnu/packages/lisp.scm (ecl): Update to 20.4.24.
[native-inputs]: Add texinfo to make the manual.
[license]: Set to lgpl2.1+.
2020-04-28 11:47:46 +02:00
143eaa82d6
gnu: sbcl-cl-cffi-gtk: Link source to parent to reduce closure size.
...
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk)[arguments]: Replace source
folder with link to the same folder in the sbcl-cl-cffi-gtk-glib dependency.
2020-04-28 11:47:46 +02:00
80d8c00c84
gnu: sbcl-cl-cffi-gtk-gdk: Link source to parent to reduce closure size.
...
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk-gdk)[arguments]: Replace source
folder with link to the same folder in the sbcl-cl-cffi-gtk-glib dependency.
2020-04-28 11:47:45 +02:00
2666a3361e
gnu: sbcl-cl-cffi-gtk-gdk-pixbuf: Link source to parent to reduce closure size.
...
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk-gdk-pixbuf)[arguments]: Replace source
folder with link to the same folder in the sbcl-cl-cffi-gtk-glib dependency.
2020-04-28 11:47:45 +02:00
d27f033f97
gnu: sbcl-cl-cffi-gtk-pango: Link source to parent to reduce closure size.
...
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk-pango)[arguments]: Replace source
folder with link to the same folder in the sbcl-cl-cffi-gtk-glib dependency.
2020-04-28 11:47:45 +02:00
8f46a9d67f
gnu: sbcl-cl-cffi-gtk-cairo: Link source to parent to reduce closure size.
...
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk-cairo)[arguments]: Replace source
folder with link to the same folder in the sbcl-cl-cffi-gtk-glib dependency.
2020-04-28 11:47:45 +02:00
6a7f366864
gnu: sbcl-cl-cffi-gtk-gio: Link source to parent to reduce closure size.
...
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk-gio)[arguments]: Replace source
folder with link to the same folder in the sbcl-cl-cffi-gtk-glib dependency.
2020-04-28 11:47:45 +02:00
eac71f54fe
gnu: sbcl-cl-cffi-gtk-gobject: Link source to parent to reduce closure size.
...
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk-gobject)[arguments]: Replace source
folder with link to the same folder in the sbcl-cl-cffi-gtk-glib dependency.
2020-04-28 11:47:45 +02:00
ef3cc2d883
gnu: Add emacs-trashed.
...
* gnu/packages/emacs-xyz.scm (emacs-trashed): New variable.
2020-04-28 11:47:45 +02:00
62d45e463c
gnu: gnuradio-osmosdr: Add hackrf support.
...
* gnu/packages/radio.scm (gnuradio-osmosdr)[inputs]: Add hackrf.
2020-04-28 10:17:08 +02:00
79c4fb4f36
gnu: Add hackrf.
...
* gnu/packages/radio.scm (hackrf): New variable.
Co-authored-by: Guillaume Le Vaillant <glv@posteo.net>
2020-04-28 10:17:08 +02:00
0ae8505288
gnu: hpcguix-web: Use guile3.0-guix.
...
* gnu/packages/web.scm (hpcguix-web): Update to latest revision and use
guile3.0 inputs.
2020-04-28 10:13:30 +02:00
d9e9a26176
gnu: python-scikit-learn: Make python-joblib a propagated input.
...
* gnu/packages/machine-learning.scm (python-scikit-learn)
[native-inputs]: Move 'python-joblib' to ...
[propagated-inputs]: ... here.
Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
2020-04-28 09:34:29 +02:00
b3cf5f8601
gnu: gst-kaldi-nnet2-online: Update to 0-2.cb227ef.
...
* gnu/packages/machine-learning.scm (gst-kaldi-nnet2-online): Update to
0-2.cb227ef.
2020-04-28 08:44:04 +02:00
0877b74f6e
gnu: kaldi: Update to 0-2.d4791c0.
...
* gnu/packages/machine-learning.scm (kaldi): Update to 0-2.d4791c0.
2020-04-28 08:44:04 +02:00
9c726c485a
gnu: r-hdf5array: Update to 1.14.4.
...
* gnu/packages/bioinformatics.scm (r-hdf5array): Update to 1.14.4.
2020-04-28 08:44:04 +02:00
cda0683295
gnu: r-seurat: Update to 3.1.5.
...
* gnu/packages/bioinformatics.scm (r-seurat): Update to 3.1.5.
[propagated-inputs]: Remove r-metap.
2020-04-28 08:44:04 +02:00
ed720abc26
gnu: r-topicmodels: Update to 0.2-11.
...
* gnu/packages/cran.scm (r-topicmodels): Update to 0.2-11.
2020-04-28 08:44:04 +02:00
1d9e71ed29
gnu: r-stopwords: Update to 2.0.
...
* gnu/packages/cran.scm (r-stopwords): Update to 2.0.
[propagated-inputs]: Add r-desc and r-usethis.
2020-04-28 08:44:04 +02:00
2c439cae92
gnu: r-fda: Update to 5.1.4.
...
* gnu/packages/cran.scm (r-fda): Update to 5.1.4.
2020-04-28 08:44:04 +02:00
e1fe5e9bed
gnu: r-abtest: Update to 0.2.1.
...
* gnu/packages/cran.scm (r-abtest): Update to 0.2.1.
[propagated-inputs]: Add r-qgam; remove r-vgam.
2020-04-28 08:44:04 +02:00
169f9fe13a
gnu: Add r-qgam.
...
* gnu/packages/cran.scm (r-qgam): New variable.
2020-04-28 08:44:03 +02:00
5ffe706b84
gnu: r-systemfonts: Update to 0.2.0.
...
* gnu/packages/cran.scm (r-systemfonts): Update to 0.2.0.
[inputs]: Remove freetype.
[native-inputs]: Add r-knitr.
2020-04-28 08:44:03 +02:00
8165bf6d90
gnu: r-dalex: Update to 1.2.0.
...
* gnu/packages/cran.scm (r-dalex): Update to 1.2.0.
[propagated-inputs]: Add r-ibreakdown and r-ingredients.
2020-04-28 08:44:03 +02:00
1816cb262c
gnu: r-rex: Update to 1.2.0.
...
* gnu/packages/cran.scm (r-rex): Update to 1.2.0.
[propagated-inputs]: Remove r-magrittr.
[native-inputs]: Add r-knitr.
2020-04-28 08:44:03 +02:00
838ec254a0
gnu: r-optparse: Update to 1.6.6.
...
* gnu/packages/cran.scm (r-optparse): Update to 1.6.6.
[native-inputs]: Add r-knitr.
2020-04-28 08:44:03 +02:00
bf4e440c19
gnu: r-sf: Update to 0.9-2.
...
* gnu/packages/cran.scm (r-sf): Update to 0.9-2.
2020-04-28 08:44:03 +02:00
5123ec7858
gnu: r-future-apply: Update to 1.5.0.
...
* gnu/packages/cran.scm (r-future-apply): Update to 1.5.0.
2020-04-28 08:44:03 +02:00
c6eb1fe616
gnu: r-etm: Update to 1.1.
...
* gnu/packages/cran.scm (r-etm): Update to 1.1.
2020-04-28 08:44:03 +02:00
fbcbf8d586
gnu: r-future: Update to 1.17.0.
...
* gnu/packages/cran.scm (r-future): Update to 1.17.0.
2020-04-28 08:44:03 +02:00
d62d838bf9
gnu: r-protviz: Update to 0.6.4.
...
* gnu/packages/cran.scm (r-protviz): Update to 0.6.4.
2020-04-28 08:44:03 +02:00
71c0a61cac
gnu: r-rgl: Update to 0.100.54.
...
* gnu/packages/cran.scm (r-rgl): Update to 0.100.54.
2020-04-28 08:44:03 +02:00
e2a50e5ec4
gnu: r-ggeffects: Update to 0.14.3.
...
* gnu/packages/cran.scm (r-ggeffects): Update to 0.14.3.
2020-04-28 08:44:03 +02:00
09410f17d2
gnu: r-bayestestr: Update to 0.6.0.
...
* gnu/packages/cran.scm (r-bayestestr): Update to 0.6.0.
2020-04-28 08:44:03 +02:00
27588b365f
gnu: r-emmeans: Update to 1.4.6.
...
* gnu/packages/cran.scm (r-emmeans): Update to 1.4.6.
[native-inputs]: Add r-knitr.
2020-04-28 08:44:03 +02:00
09bb872aff
gnu: r-raster: Update to 3.1-5.
...
* gnu/packages/cran.scm (r-raster): Update to 3.1-5.
2020-04-28 08:44:02 +02:00
35f84a7f27
gnu: r-insight: Update to 0.8.3.
...
* gnu/packages/cran.scm (r-insight): Update to 0.8.3.
2020-04-28 08:44:02 +02:00
f1f77bb64e
gnu: r-tinytex: Update to 0.22.
...
* gnu/packages/cran.scm (r-tinytex): Update to 0.22.
2020-04-28 08:44:02 +02:00
e965442b38
gnu: r-tsp: Update to 1.1-10.
...
* gnu/packages/cran.scm (r-tsp): Update to 1.1-10.
2020-04-28 08:44:02 +02:00
839c39b178
gnu: r-broom: Update to 0.5.6.
...
* gnu/packages/cran.scm (r-broom): Update to 0.5.6.
[native-inputs]: Add r-knitr.
2020-04-28 08:44:02 +02:00
92d81a5e5b
gnu: r-distillery: Update to 1.0-7.
...
* gnu/packages/cran.scm (r-distillery): Update to 1.0-7.
2020-04-28 08:44:02 +02:00
4c0cf66cfc
gnu: r-ff: Update to 2.2-14.2.
...
* gnu/packages/cran.scm (r-ff): Update to 2.2-14.2.
2020-04-28 08:44:02 +02:00
d911e22af3
gnu: r-powerlaw: Update to 0.70.6.
...
* gnu/packages/cran.scm (r-powerlaw): Update to 0.70.6.
[propagated-inputs]: Remove r-vgam; add r-pracma.
[native-inputs]: Add r-knitr.
2020-04-28 08:44:02 +02:00
92f5ed2fd7
gnu: r-shinyfiles: Update to 0.8.0.
...
* gnu/packages/cran.scm (r-shinyfiles): Update to 0.8.0.
2020-04-28 08:44:02 +02:00
50f298a54f
gnu: Add r-ibreakdown.
...
* gnu/packages/cran.scm (r-ibreakdown): New variable.
2020-04-28 08:44:02 +02:00
befa394f45
gnu: Add r-ingredients.
...
* gnu/packages/cran.scm (r-ingredients): New variable.
2020-04-28 08:44:02 +02:00
d29cd83bd8
gnu: r-purrr: Update to 0.3.4.
...
* gnu/packages/statistics.scm (r-purrr): Update to 0.3.4.
[native-inputs]: Add r-knitr.
2020-04-28 08:44:02 +02:00
0e3003930e
gnu: r-plotrix: Update to 3.7-8.
...
* gnu/packages/statistics.scm (r-plotrix): Update to 3.7-8.
2020-04-28 08:44:02 +02:00
67aced6323
gnu: r-withr: Update to 2.2.0.
...
* gnu/packages/statistics.scm (r-withr): Update to 2.2.0.
[native-inputs]: Add r-knitr.
2020-04-28 08:44:02 +02:00
7ef5f77b91
gnu: r-xml2: Update to 1.3.2.
...
* gnu/packages/statistics.scm (r-xml2): Update to 1.3.2.
2020-04-28 08:44:01 +02:00
568d1d7bfc
gnu: r-dbplyr: Update to 1.4.3.
...
* gnu/packages/statistics.scm (r-dbplyr): Update to 1.4.3.
[propagated-inputs]: Add r-lifecycle.
[native-inputs]: Add r-knitr.
2020-04-28 08:44:01 +02:00
666d97964a
gnu: r-tibble: Update to 3.0.1.
...
* gnu/packages/statistics.scm (r-tibble): Update to 3.0.1.
2020-04-28 08:44:01 +02:00
288ab9039b
gnu: r-foreign: Update to 0.8-78.
...
* gnu/packages/statistics.scm (r-foreign): Update to 0.8-78.
2020-04-28 08:44:01 +02:00
c1dc7858d7
gnu: r-with-tests, r-minimal: Update to 4.0.0.
...
* gnu/packages/statistics.scm (r-with-tests, r-minimal): Update to 4.0.0.
(r-with-tests)[arguments]: Add phase "set-locales".
[native-inputs]: Add texlive-ae, texlive-inconsolata, and
texlive-latex-xkeyval to texlive-union.
[inputs]: Replace pcre with pcre2.
2020-04-28 08:44:01 +02:00
89909327d0
gnu: stellarium: Update to 0.20.1.
...
* gnu/packages/astronomy.scm (stellarium): Update to 0.20.1.
2020-04-28 00:23:35 +02:00
78799a6fdc
gnu: Update minimap2 to 2.17.
...
* gnu/packages/bioinformatics.scm (minimap2): Update to 2.17.
2020-04-27 21:34:10 +02:00
693d0fffc8
gnu: Add sbcl-stumpwm-swm-gaps.
...
* gnu/packages/wm.scm (sbcl-stumpwm-swm-gaps): New variable.
2020-04-27 22:21:35 +03:00
bb6d9e2633
gnu: tarsplitter: Fix typo in description (spilt/split).
...
* gnu/packages/compression.scm (tarsplitter)[description]: Fix typo.
2020-04-27 20:43:32 +02:00
58a361fef4
gnu: Add wf-recorder.
...
* gnu/packages/video.scm (wf-recorder): New variable.
Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
2020-04-27 18:22:56 +02:00
c53886a55a
gnu: ktsuss: Use setuid "su" and "sudo" commands.
...
This has ktsudo actually gain root access.
* gnu/packages/admin.scm (ktsuss)[arguments]: Instead of <sudo>/bin/{su,sudo}
file names, use the setuid' verrsions.
2020-04-27 18:17:24 +02:00
138896e1ea
gnu: herbstluftwm: Update to 0.8.1
...
* gnu/packages/wm.scm: herbstluftwm: Update to 0.8.1
Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>
2020-04-27 18:05:11 +02:00
f38ba7b65d
gnu: fldigi: Update to 4.1.12.
...
* gnu/packages/radio.scm (fldigi): Update to 4.1.12.
2020-04-27 16:54:34 +02:00
2ef4d273d1
file-systems: mount the PID cgroup filesystem.
...
* gnu/system/file-systems.scm (%control-groups): Add "pids".
* gnu/services/docker.scm (docker-shepherd-service): Resolve a TODO.
This has allowed me to make a specific configuration of nsjail work.
2020-04-27 14:14:47 +02:00
639ae3f20b
gnu: Add python-scikit-rebate.
...
* gnu/packages/machine-learning.scm (python-scikit-rebate): New variable.
2020-04-27 13:54:43 +02:00
ccf70a80a1
gnu: Add python-deeptools.
...
* gnu/packages/bioinformatics.scm (python-deeptools): New variable.
2020-04-27 13:43:05 +02:00
c43edf6f30
gnu: Add python-deeptoolsintervals.
...
* gnu/packages/bioinformatics.scm (python-deeptoolsintervals): New variable.
2020-04-27 13:39:25 +02:00
4c24186ae0
gnu: Add python-bitarray.
...
* gnu/packages/python-xyz.scm (python-bitarray): New variable.
2020-04-27 13:09:02 +02:00
06fc1a5142
gnu: Add r-cummerbund.
...
* gnu/packages/bioconductor.scm (r-cummerbund): New variable.
2020-04-27 11:46:08 +02:00
91370829f4
gnu: Add r-inum.
...
* gnu/packages/cran.scm (r-inum): New variable.
2020-04-27 11:15:38 +02:00
415176e89d
gnu: Add r-ggpmisc.
...
* gnu/packages/cran.scm (r-ggpmisc): New variable.
2020-04-27 11:05:49 +02:00
0c0ef9c5a6
gnu: Add r-coverageview.
...
* gnu/packages/bioconductor.scm (r-coverageview): New variable.
2020-04-27 10:57:22 +02:00
d4f86c8b66
gnu: Add peek.
...
* gnu/packages/video.scm (peek): New variable.
2020-04-27 10:46:12 +02:00
c170a15996
gnu: emacs-org-reveal: Fix syntax error in description.
...
* gnu/packages/emacs-xyz.scm (emacs-org-reveal)[description]: Fix Texinfo
syntax error.
2020-04-27 10:45:51 +02:00
320dd1195e
gnu: Add texlive-inconsolata.
...
* gnu/packages/tex.scm (texlive-inconsolata): New variable.
2020-04-27 10:45:51 +02:00
8ce240fdbf
gnu: Add r-bsgenome-hsapiens-ucsc-hg38.
...
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ucsc-hg38): New variable.
2020-04-27 10:43:51 +02:00
cb1ab0352b
gnu: Add r-karyoploter.
...
* gnu/packages/bioconductor.scm (r-karyoploter): New variable.
2020-04-27 10:37:42 +02:00
e658838c62
gnu: Add r-bezier.
...
* gnu/packages/cran.scm (r-bezier): New variable.
2020-04-27 10:28:50 +02:00
e8d435f7a2
gnu: Add r-ideoviz.
...
* gnu/packages/bioconductor.scm (r-ideoviz): New variable.
2020-04-27 10:24:20 +02:00
df6c7f0487
gnu: Add r-ecp.
...
* gnu/packages/cran.scm (r-ecp): New variable.
2020-04-27 10:18:48 +02:00
8521d93854
gnu: Add r-reordercluster.
...
* gnu/packages/cran.scm (r-reordercluster): New variable.
2020-04-27 10:11:21 +02:00
9c63165d9e
gnu: liblinphone: Move documentation and tester to separate outputs.
...
* gnu/packages/linphone.scm (liblinphone)[outputs]: Add a "doc" and "tester"
outputs.
[phases]: Add a separate-outputs phase. Move the
glib-or-gtk-compile-schemas and glib-or-gtk-wrap phases after it.
2020-04-27 00:54:44 -04:00
1ae4325734
gnu: liblinphone: Fix the input type of some dependencies.
...
Libraries being linked to such as libxml2, libiconv and zlib should appear as
'inputs' rather than 'native-inputs'.
* gnu/packages/linphone.scm (liblinphone)[native-inputs]: Move libiconv,
libxml2 and zlib to...
[inputs]: ...here. Move eudev, python-pystache and python-six to
native-inputs.
2020-04-27 00:54:30 -04:00
8472c26c25
gnu: liblinphone: Remove hicolor-icon-theme and murrine inputs.
...
Icon themes and theme engines are best left for the users to select and
install themselves.
* gnu/packages/linphone.scm (liblinphone)[inputs]: Remove hicolor-icon-theme.
[propagated-inputs]: Remove murrine.
2020-04-27 00:54:30 -04:00
3b177a6c33
gnu: Add loadable module to wireguard-linux-compat.
...
* gnu/packages/vpn.scm (wireguard-linux-compat)[build-system]: Replace
'gnu-build-system' by 'linux-module-build-system'.
[outputs]: Add 'kernel-patch'.
[arguments]: Adjust the build system. Add phases 'change-directory' and
'reset-cwd'. Rename phases 'build' to 'build-patch' and 'install' to
'install-patch'.
[description]: Mention the loadable module.
Signed-off-by: Leo Famulari <leo@famulari.name>
2020-04-26 18:24:28 -04:00
0e5c2d5e14
services: system: Initial entries are non-monadic.
...
* gnu/system.scm (operating-system-directory-base-entries): Return a
regular, non-monadic value.
* gnu/services.scm (system-derivation): Adjust accordingly.
* gnu/system/linux-container.scm (container-essential-services): Likewise.
2020-04-26 22:49:49 +02:00
45bd91334f
services: profile: Use a declarative profile.
...
* gnu/services.scm (packages->profile-entry): Use 'profile' instead of
'profile-derivation'.
2020-04-26 22:49:48 +02:00
cda751105e
system: 'operating-system-directory-base-entries' uses 'profile'.
...
* gnu/system.scm (operating-system-directory-base-entries): Use a
declarative profile instead of 'profile-derivation'.
2020-04-26 22:49:48 +02:00
1408e2abeb
gnu: r-snplocs-hsapiens-dbsnp144-grch37: Fix description.
...
* gnu/packages/bioconductor.scm: Use two spaces after ending a sentence.
2020-04-26 21:47:19 +02:00
63daca1e92
gnu: Add r-snplocs-hsapiens-dbsnp144-grch37.
...
* gnu/packages/bioconductor.scm (r-snplocs-hsapiens-dbsnp144-grch37): New
variable.
2020-04-26 21:34:49 +02:00
b58a22e5b7
gnu: Add hackneyed-x11-cursors.
...
* gnu/packages/xorg.scm (hackneyed-x11-cursors): New variable.
2020-04-26 15:32:10 -04:00
886125d791
gnu: Add r-motifbreakr.
...
* gnu/packages/bioconductor.scm (r-motifbreakr): New variable.
2020-04-26 21:24:03 +02:00
3699bcf54a
gnu: Add r-motifdb.
...
* gnu/packages/bioconductor.scm (r-motifdb): New variable.
2020-04-26 21:07:45 +02:00
ec20858a6a
gnu: Add r-pasilla.
...
* gnu/packages/bioconductor.scm (r-pasilla): New variable.
2020-04-26 21:02:00 +02:00
f476238431
gnu: guile3.0-chickadee: Rename to guile3.0-chickadee.
...
This avoids having to packages, both called guile-chickadee.
* gnu/packages/game-development.scm (guile3.0-chickadee)[name]: Change from
guile-chickadee to guile3.0-chickadee.
2020-04-26 19:44:33 +01:00
53aa66c3df
reconfigure: Don't call build-derivations for upgrade-services test
...
This commit adjusts the upgrade-services system test to not build anything
when computing the derivation for the system test. I came across this when
looking at issues computing the system test derivations to store in the Guix
Data Service.
* gnu/tests/reconfigure.scm (run-upgrade-services-test): Remove the use of,
and definition for ensure-service-file.
2020-04-26 19:41:56 +01:00
910bf1f7a1
gnu: Add tarsplitter.
...
* gnu/packages/compression.scm (tarsplitter): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-04-26 21:07:43 +03:00
ca4b55882a
gnu: Add rav1e.
...
* gnu/packages/video.scm (rav1e): New variable.
* gnu/packages/rust-apps.scm (rust-cbindgen-0.12, rust-cargo-c): New
variables.
* gnu/packages/crates-io.scm: Various new packages and upgrades.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-04-26 19:57:46 +03:00
ee8de73814
gnu: python-scanpy: Update to 1.4.6.
...
* gnu/packages/bioinformatics.scm (python-scanpy): Update to 1.4.6.
[arguments]: Add another network based test to skip.
[propagated-inputs]: Add python-tqdm.
2020-04-26 15:03:50 +03:00
2b829898c7
gnu: python-publicsuffix2: Adjust for Guile 3.0.
...
* gnu/packages/python-web.scm (python-publicsuffix2): Provide explicit
destination in calls to FORMAT.
2020-04-26 13:31:16 +02:00
52bdd30407
gnu: nim: Adjust for Guile 3.0.
...
* gnu/packages/nim.scm (nim)[arguments]: Provide explicit destination in calls
to FORMAT.
2020-04-26 13:31:16 +02:00
05e3ed302f
gnu: tpacpi-bat: Adjust for Guile 3.0.
...
* gnu/packages/linux.scm (tpacpi-bat)[arguments]: Provide explicit destination
in calls to FORMAT.
2020-04-26 13:31:16 +02:00
30d0f7fa8f
gnu: nmoldyn: Adjust for Guile 3.0.
...
* gnu/packages/chemistry.scm (nmoldyn)[arguments]: Provide explicit
destination in calls to FORMAT.
2020-04-26 13:31:16 +02:00
02de4b1da1
gnu: calcurse: Adjust for Guile 3.0.
...
* gnu/packages/calcurse.scm (calcurse)[arguments]: Provide explicit
destination in calls to FORMAT.
2020-04-26 13:31:15 +02:00
f989dffd2c
gnu: thinkfan: Adjust for Guile 3.0.
...
* gnu/packages/linux.scm (thinkfan)[arguments]: Provide explicit destination
in calls to FORMAT (destination is no longer optional with Guile 3).
2020-04-26 13:31:15 +02:00
660611e5f6
gnu: Add sylpheed.
...
* gnu/packages/mail.scm (sylpheed): New variable.
Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
2020-04-26 12:47:19 +02:00
0745e28d66
gnu: Add xarchiver.
...
* gnu/packages/compression (xarchiver): New variable.
Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
2020-04-26 12:25:59 +02:00
0bf66cbb72
gnu: Add python-osc.
...
* gnu/packages/python-xyz.scm (python-osc): New variable.
Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
2020-04-26 12:15:09 +02:00
bb85018ceb
gnu: hugin: Update to 2019.2.0.
...
* gnu/packages/photo.scm (hugin): Update to 2019.2.0.
Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
2020-04-26 12:14:49 +02:00
018114baa7
gnu: maradns: Fix cross compilation.
...
* gnu/packages/dns.scm (maradns)[arguments]: Build make_32bit_tables for the
host.
2020-04-26 15:14:46 +05:30
796b387bc2
vm: Remove unused import.
...
* gnu/system/vm.scm: Do not import (gnu packages make-bootstrap).
2020-04-26 11:27:06 +02:00
186f99f0f7
gnu: perl-glib: Update to 1.3292.
...
* gnu/packages/glib.scm (perl-glib): Update to 1.3292.
2020-04-26 10:22:14 +03:00
a17e5092bc
gnu: svt-av1: Update to 0.8.2.
...
* gnu/packages/video.scm (svt-av1): Update to 0.8.2.
2020-04-25 22:26:49 -04:00
9b7e41f2d7
gnu: arm-trusted-firmware: Update to 2.3.
...
* gnu/packages/firmware (make-arm-trusted-firmware): Update to 2.3.
[source]: Remove hdcp patch.
* gnu/packages/patches/arm-trusted-firmware-disable-hdcp.patch: Remove patch.
* gnu/local.mk: Update accordingly.
2020-04-25 17:08:52 -07:00
396eb9e1a9
gnu: Add sbcl-stumpwm-globalwindows.
...
* gnu/packages/wm.scm (sbcl-stumpwm-globalwindows): New variable.
2020-04-26 01:59:33 +03:00
5cca16968e
gnu: pavucontrol: Fix icons.
...
* gnu/packages/pulseaudio.scm (pavucontrol): Fix icons.
[build-system]: Use glib-or-gtk-build-system instead of gnu-build-system.
[inputs]: Add adwaita-icon-theme. Re-order inputs.
Since the adwaita icon theme is hard-coded in the application, there is
no choice for the user anyway. So added adwaita-icon-theme to inputs and
changed build-system to glib-or-gtk to fix loading of icons.
2020-04-25 23:01:29 +02:00
3a5d1c9b6b
gnu: fontmanager: Update to 0.7.7.
...
* gnu/packages/fontutils.scm (fontmanager): Update to 0.7.7.
2020-04-25 22:54:11 +02:00
b0ec8c675e
gnu: python-webob: Update to 1.8.3
...
* gnu/packages/python-web.scm (python-webob): Update to 1.8.3.
2020-04-25 22:38:11 +02:00
82bd276d60
gnu: python-pastedeploy: Update to 2.1.0
...
* gnu/packages/python-web.scm (python-pastedeploy): Update to 2.1.0.
[arguments]: Add test-target.
[native-inputs]: Replace python-nose with python-pytest and python-pytest-runner.
2020-04-25 22:38:11 +02:00
731e92f0f8
gnu: elixir: Update to 1.10.3.
...
* gnu/packages/elixir.scm (elixir): Update to 1.10.3.
2020-04-25 22:26:48 +02:00
813a88bb5a
gnu: flowee: Update to 2020.03.2
...
* gnu/packages/finance.scm (flowee): Update to 2020.03.2
2020-04-25 22:24:00 +02:00
ba11dddbfe
gnu: texlive-latex-pdfx: Fix typo.
...
* gnu/packages/tex.scm (texlive-latex-pdfx)[description]: Fix typo.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-04-25 22:23:20 +02:00
e56ab46ba0
gnu: python-reportlib: Update to 3.5.42.
...
* gnu/packages/pdf.scm (python-reportlib): Update to 3.5.42.
2020-04-25 22:51:37 +03:00
2d8270ad56
gnu: python-reportlib: Add missing libraries.
...
* gnu/packages/pdf.scm (python-reportlib)[arguments]: Add
'use-system-libart' configure flag. Add custom phase to find libraries.
[inputs]: Add libart-lgpl, font-curve-files.
2020-04-25 22:46:34 +03:00
8cf6d150b4
gnu: Add osicat.
...
* gnu/packages/lisp-xyz.scm (closicat, sbcl-osicat): New variables.
2020-04-25 19:45:29 +02:00
f84b036305
gnu: webkitgtk: Update to 2.28.2.
...
* gnu/packages/webkit.scm (webkitgtk): Update to 2.28.2.
2020-04-24 23:20:09 -04:00
f2ce2d1274
gnu: linux-libre@5.6: Update deblob scripts.
...
* gnu/packages/linux.scm (deblob-scripts-5.6): Update to 5.6.7.
2020-04-24 19:06:13 -04:00
c10e8cf75e
gnu: u-boot: Update to 2020.04.
...
* gnu/packages/bootloaders (u-boot): Update to 2020.04.
[native-inputs]: Replace sdl with sdl2.
Co-authored-by: Vagrant Cascadian <vagrant@debian.org>
2020-04-24 15:59:44 -07:00
0d36d0baea
gnu: Add maradns.
...
* gnu/packages/dns.scm (maradns): New variable.
2020-04-25 03:43:08 +05:30
1317ff3259
gnu: linux-libre@4.14: Update to 4.14.177.
...
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.177.
(linux-libre-4.14-pristine-source): Update hash.
2020-04-24 18:07:54 -04:00
0c8941b504
gnu: linux-libre@4.9: Update to 4.9.220.
...
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.220.
(linux-libre-4.9-pristine-source): Update hash.
2020-04-24 18:07:18 -04:00
9c8b5d5e08
gnu: linux-libre@4.4: Update to 4.4.220.
...
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.220.
(linux-libre-4.4-pristine-source): Update hash.
2020-04-24 18:06:14 -04:00
45320ad808
gnu: pdfpc: Upgrade to 4.4.0
...
* gnu/packages/pdf.scm (pdfpc): Upgrade to 4.4.0.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2020-04-24 23:24:23 +02:00
5e57967652
gnu: python-pytest-timeout: Update to 1.3.4.
...
* gnu/packages/check.scm (python-pytest-timeout): Update to 1.3.4.
[arguments]: Override check phase.
[native-inputs]: Add PYTHON-PEXPECT.
2020-04-24 23:24:23 +02:00
ddb0fef554
gnu: Add ktsuss.
...
* gnu/packages/admin.scm (ktsuss): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-04-24 22:10:57 +02:00
bf37b49cdd
gnu: spacefm: Add dependencies for extra functionality.
...
* gnu/packages/lxde.scm (spacefm): Add dependencies for extra functionality.
Adding these inputs and making required changes to build-system+arguments;
provides icons, privilege-management and disk-management.
2020-04-24 22:03:09 +02:00
9b42918edd
gnu: guix: Update to 7dd0539.
...
* gnu/packages/package-management.scm (guix): Update to 1.1.0-1.7dd0539.
2020-04-24 16:53:43 +02:00
40fd909e3d
gnu: biber: Downgrade to 2.11.
...
Biber 2.12 is incompatible with biblatex 3.11, which is what's currently
packaged. This is a followup to 41a010875b
2020-04-24 16:22:02 +02:00
122b3cd68d
gnu: biber: Address test failures.
...
* gnu/packages/patches/biber-sortinithash.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/tex.scm (biber)[source]: Use it.
2020-04-24 16:21:13 +02:00
2520059bdb
pack: 'guix pack -R' wrapper correctly reports exit code.
...
Fixes <https://bugs.gnu.org/40816 >.
Reported by Jan (janneke) Nieuwenhuizen <janneke@gnu.org>.
* gnu/packages/aux-files/run-in-namespace.c (main): In the 'default'
case, check 'WIFEXITED (status)' and exit with the corresponding code in
that case. Exit with 255 in other cases.
* tests/guix-pack-relocatable.sh: Add test.
2020-04-24 16:21:13 +02:00
193192ca77
gnu: llvm: Add 10.0.0.
...
* gnu/packages/llvm.scm (llvm-10, clang-runtime-10, clang-10)
(clang-toolchain-10, llvm-9, clang-runtime-9, clang-9)
(clang-toolchain-9): New variables.
(llvm, clang, clang-runtime, clang-toolchain): Redefine as aliases to
the '-9' bindings.
* gnu/packages/patches/clang-10.0-libc-search-path.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2020-04-24 16:21:13 +02:00
4ac3461a80
gnu: Add r-rxnat.
...
* gnu/packages/cran.scm (r-rxnat): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-04-24 15:56:54 +02:00
5b38f038f6
gnu: Add r-rcdd.
...
* gnu/packages/cran.scm (r-rcdd): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-04-24 15:54:42 +02:00
53269e6971
gnu: Add r-dcv.
...
* gnu/packages/cran.scm (r-dcv): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-04-24 15:53:21 +02:00
3a8ee5ef42
gnu: r-tea: Fix typo.
...
* gnu/packages/cran.scm (r-tea)[description]: Fix typo.
2020-04-24 15:51:52 +02:00
26e5dab74a
gnu: Add r-stam.
...
* gnu/packages/cran.scm (r-stam): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-04-24 15:51:39 +02:00
d234006b38
gnu: Add r-grouped.
...
* gnu/packages/cran.scm (r-grouped): New variable.
2020-04-24 15:51:39 +02:00
aa3fdca85c
gnu: Add r-sgloptim.
...
* gnu/packages/cran.scm (r-sgloptim): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-04-24 15:51:39 +02:00
ea43d299fa
gnu: Add r-aws.
...
* gnu/packages/cran.scm (r-aws): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-04-24 15:51:38 +02:00
fe14871edd
gnu: Add r-awsmethods.
...
* gnu/packages/cran.scm (r-awsmethods): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-04-24 15:43:01 +02:00
ba07c7f067
gnu: Add r-tea.
...
* gnu/packages/cran.scm (r-tea): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-04-24 15:40:10 +02:00
a1d369f139
gnu: Add texlive-csquotes.
...
* gnu/packages/tex.scm (texlive-csquotes): New variable.
2020-04-24 15:19:35 +02:00
1e700c656a
gnu: datamash: Update to 1.7.
...
* gnu/packages/datamash.scm (datamash): Update to 1.7.
2020-04-24 14:52:32 +03:00
2fea2b6414
gnu: java-eclipse-jetty-test-helper: Don't use unstable tarball.
...
* gnu/packages/web.scm (java-eclipse-jetty-test-helper)[source]: Download
using git-fetch.
2020-04-24 14:52:32 +03:00
298c113134
gnu: linux-libre: Update to 5.4.35.
...
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.35.
(linux-libre-5.4-pristine-source): Update hash.
2020-04-23 19:57:00 -04:00
3fdccd5ba6
gnu: linux-libre@5.6: Update to 5.6.7.
...
* gnu/packages/linux.scm (linux-libre-5.6-version): Update to 5.6.7.
(linux-libre-5.6-pristine-source): Update hash.
2020-04-23 19:56:13 -04:00
887c61e67f
gnu: linux-libre@4.19: Update to 4.19.118.
...
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.118.
(linux-libre-4.19-pristine-source): Update hash.
2020-04-23 19:55:15 -04:00
5a91563221
gnu: Add wsjtx.
...
* gnu/packages/radio.scm (wsjtx-hamlib): New variable.
(wsjtx): New variable.
2020-04-24 00:00:33 +02:00
e6d141652c
gnu: fldigi: Add hamlib support.
...
* gnu/packages/radio.scm (fldigi)[inputs]: Add hamlib and libusb.
2020-04-24 00:00:33 +02:00
409dfdf03d
gnu: Add hamlib.
...
* gnu/packages/radio.scm (hamlib): New package.
2020-04-24 00:00:33 +02:00
b90b7f16ed
gnu: Add wolf-spectrum.
...
* gnu/packages/music.scm (wolf-spectrum): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-04-23 23:59:23 +02:00
59be2959a6
gnu: Add wolf-shaper.
...
* gnu/packages/music.scm (wolf-shaper): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-04-23 23:59:23 +02:00
0f25feb159
gnu: Squid: Update to 4.11 [fixes CVE-2020-{11945,12519,12521}].
...
* gnu/packages/networking.scm (squid): Update to 4.11.
2020-04-23 13:25:14 -04:00
54b3d583af
gnu: grammalecte: Update to 1.9.0.
...
* gnu/packages/dictionaries.scm (grammalecte): Update to 1.9.0.
2020-04-23 19:17:52 +02:00
0fb2bc8392
gnu: liburcu: Update to 0.12.1.
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* gnu/packages/datastructures.scm (liburcu): Update to 0.12.1.
2020-04-23 19:07:20 +02:00
8e2a423800
gnu: GNU FreeFont: Add a deprecated alias for "font-gnu-freefont-ttf".
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This is a followup to commit 5483a2d0a9
2020-04-23 12:35:43 -04:00
cf4a56d748
gnu: Add texlive-marginnote.
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* gnu/packages/tex.scm (texlive-marginnote): New variable.
2020-04-23 15:04:12 +02:00
938df0de73
Revert "gnu: u-boot: Update to 2020.04."
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This reverts commit be0ecfb178
2020-04-23 13:03:35 +02:00
4eff273542
gnu: emacs-4clojure: Fix license.
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* gnu/packages/emacs-xyz.scm (emacs-4clojure)[license]: Use GPL3+.
2020-04-23 10:32:06 +02:00
c47f48d972
gnu: Add visidata.
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* gnu/packages/visidata.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-04-23 07:08:07 +02:00
179c59c3d3
gnu: Add pyzo.
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* gnu/packages/python-xyz.scm (pyzo): New variable.
2020-04-23 01:12:41 +02:00
50d31a40f1
gnu: Add piper.
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* gnu/packages/gnome.scm (piper): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-04-23 00:55:51 +02:00
2cd1de321f
gnu: Add libratbag.
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* gnu/packages/gnome.scm (libratbag): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-04-23 00:49:16 +02:00
e74b2c8e68
gnu: Add python-evdev.
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* gnu/packages/linux.scm (python-evdev): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-04-23 00:49:16 +02:00
159e9dce17
gnu: Add udevil.
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* gnu/packages/disk.scm (udevil): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-04-23 00:19:21 +02:00
e36065c1a4
gnu: emacs-4clojure: Fix typos in description.
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* gnu/packages/emacs-xyz.scm (emacs-4clojure)[description]: Fix typos.
2020-04-23 00:13:11 +02:00
034a3eacf7
gnu: emacs-4clojure: Fix version.
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* gnu/packages/emacs-xyz.scm (emacs-4clojure)[version]: Use `git-version' as
there is no proper release.
2020-04-23 00:10:08 +02:00
4e74cef97a
gnu: Add emacs-4clojure.
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* gnu/packages/emacs-xyz.scm (emacs-4clojure): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-04-23 00:06:23 +02:00
5483a2d0a9
gnu: font-gnu-freefont: Add otf and woff font types.
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* gnu/packages/fonts.scm (font-gnu-freefont): Add otf and woff font types.
* gnu/packages/genealogy.scm (gramps)[inputs]: Replace font-gnu-freefont-tff
with font-gnu-freefont.
* doc/guix.texi: Adjust a reference to the package.
Signed-off-by: Leo Famulari <leo@famulari.name>
2020-04-22 17:59:44 -04:00
9fb2b7eeab
gnu: clipmenu: Fix hash.
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* gnu/packages/xdisorg.scm (clipmenu):[origin] Update hash.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-04-22 23:55:33 +02:00
541ec4d6e8
gnu: Add emacs-xclip.
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* gnu/packages/emacs-xyz.scm (emacs-xclip): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-04-22 23:47:59 +02:00
f91ad0b13d
system: Automatically adjust linux-module packages to use the
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operating-system's kernel.
* gnu/system.scm (package-for-kernel): New procedure.
(operating-system-directory-base-entries): Use it.
* gnu/tests/linux-module.scm: Test it.
2020-04-22 22:59:39 +02:00
2213d00fac
gnu: wget2: Add support for gnu updater.
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* gnu/packages/wget.scm (wget2)[properties]: New field. Add
ftp-directory.
2020-04-22 23:35:54 +03:00
c9508c4337
gnu: commoncpp: Add support for gnu updater.
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* gnu/packages/telephony.scm (commoncpp)[properties]: New field. Add
ftp-directory, upstream-name.
2020-04-22 23:34:20 +03:00
6ecce47180
gnu: osip: Update to 5.1.1.
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* gnu/packages/telephony.scm (osip): Update to 5.1.1.
2020-04-22 23:16:39 +03:00
6439c340a8
gnu: osip: Add support for gnu updater.
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* gnu/packages/telephony.scm (osip)[properties]: New field. Add
upstream-name, ftp-directory.
2020-04-22 23:14:19 +03:00
f13f02f8b3
gnu: gama: Update to 2.08.
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* gnu/packages/gps.scm (gama): Update to 2.08.
2020-04-22 23:10:22 +03:00
a9164807bd
gnu: parallel: Update to 20200422.
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* gnu/packages/parallel.scm (parallel): Update to 20200422.
2020-04-22 23:10:22 +03:00
eee4173ccc
gnu: guile-8sync: Add support for gnu updater.
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* gnu/packages/guile-xyz.scm (guile-8sync)[properties]: New field. Add
upstream-name.
2020-04-22 23:10:22 +03:00
2b0c0d9301
services: Add udev-rules-service helper.
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* doc/guix.texi (Base services): Add documentation for
'udev-rules-service'. Replace examples of 'udev-service-type' extension
with 'udev-rules-service'.
* gnu/services/base.scm (udev-rules-service): New procedure.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-04-22 19:23:58 +02:00
6ca2d7dae0
gnu: maths: dune-*: Update to version 2.7
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* gnu/packages/maths.scm (dune-*): Update to version 2.7.
(dune-uggrid)[source] Download from Git, as no release tarball for
version 2.7 exists.
(dune-alugrid,dune-subgrid,dune-pdelab)[source] Use commit hashes as no
tags for version 2.7 exist (yet?).
(dune-istl)[source](patches) Add patch required to build version 2.7
without openmpi.
* gnu/packages/patches/dune-istl-2.7-fix-non-mpi-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-04-22 19:23:58 +02:00
93664feee1
system: Split %BASE-PACKAGES in smaller parts.
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* gnu/system.scm: (%base-packages-interactive, %base-packages-linux,
%base-packages-networking, %base-packages-utils): New variables.
(%base-packages): Use those new variables.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-04-22 19:23:57 +02:00
3183148992
gnu: Add blueman.
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* gnu/packages/networking.scm (blueman): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-04-22 19:23:57 +02:00
2e37d1583a
system: 'operating-system-boot-parameters-file' uses 'scheme-file'.
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* gnu/system.scm (operating-system-boot-parameters-file): Use
'scheme-file' instead of 'gexp->file'.
(operating-system-directory-base-entries): Adjust accordingly.
2020-04-22 19:23:57 +02:00
f916ac128a
gnu: pari-gp: Update to 2.11.4.
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* gnu/packages/algebra.scm (pari-gp): Update to 2.11.4.
2020-04-22 18:29:52 +02:00
8e61dbc828
gnu: ungoogled-chromium: Update to 81.0.4044.122-0.31d6e60 [security fixes].
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This fixes CVE-2020-6459, CVE-2020-6460, and CVE-2020-6458.
* gnu/packages/chromium.scm (%chromium-version): Set to 81.0.4044.122.
(%ungoogled-revision): Set to 31d6e60c96481599b42072b4489e4468280198e3.
(%chromium-origin, %ungoogled-origin): Update hashes.
2020-04-22 16:08:26 +02:00
808d12bb08
gnu: qt@4: Update source URI.
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* gnu/packages/qt.scm (qt-4)[source](uri): Adjust to current.
2020-04-22 16:08:26 +02:00
cbd2e1edc8
gnu: Remove mumimu.
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* gnu/packages/mail.scm (mumimu): Remove variable.
2020-04-22 15:44:30 +02:00
decf7f6c41
gnu: mumi: Update to 0.0.0-16.9175199.
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* gnu/packages/mail.scm (mumi): Update to 0.0.0-16.9175199.
[inputs]: Add guile-xapian; remove mumimu.
2020-04-22 15:44:30 +02:00
618819aa2f
gnu: Add w-scan.
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* gnu/packages/video.scm (w-scan): New variable.
2020-04-22 11:02:43 +02:00
ed248424d8
gnu: Add font-meera-inimai.
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* gnu/packages/fonts.scm (font-meera-inimai): New variable.
2020-04-22 09:58:38 +05:30
d2b237d0cc
gnu: Add python-google-brotli.
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* gnu/packages/compression.scm (python-google-brotli): New variable.
2020-04-22 09:58:28 +05:30
6e8f58fe31
gnu: linux-libre: Update to 5.4.34.
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* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.34.
(linux-libre-5.4-pristine-source): Update hash.
2020-04-21 18:22:09 -04:00
5800d54bee
gnu: linux-libre@5.6: Update to 5.6.6.
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* gnu/packages/linux.scm (linux-libre-5.6-version): Update to 5.6.6.
(linux-libre-5.6-pristine-source): Update hash.
2020-04-21 18:21:11 -04:00
fe8b2fc24a
gnu: linux-libre@4.19: Update to 4.19.117.
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* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.117.
(linux-libre-4.19-pristine-source): Update hash.
2020-04-21 18:20:03 -04:00
0b9a117765
gnu: OpenSSL: Update to 1.1.1g [fixes CVE-2020-1967].
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* gnu/packages/tls.scm (openssl)[replacement]: Replace with openssl-1.1.1g.
(openssl-1.1.1e): Replace variable with ...
(openssl-1.1.1g): ... this.
2020-04-21 16:03:29 -04:00
a1c34680b3
gnu: emacs-dired-toggle-sudo: Update to 1.0-0.13bbe52.
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* gnu/packages/emacs-xyz.scm (emacs-dired-toggle-sudo): Update to 1.0-0.13bbe52.
* gnu/packages/patches/emacs-dired-toggle-sudo-emacs-26.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
Signed-off-by: Leo Famulari <leo@famulari.name>
2020-04-21 12:53:56 -04:00
7681246325
gnu: shepherd: Add Guile 2.0 variant.
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* gnu/packages/admin.scm (guile2.0-shepherd): New variable.
2020-04-21 16:33:21 +02:00
e3358a831e
gnu: shepherd: Update to 0.8.0.
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* gnu/packages/admin.scm (shepherd): Update to 0.8.0.
* gnu/services/shepherd.scm (shepherd-configuration-file): Use
'default-pid-file-timeout' instead of fiddling with '%pid-file-timeout'.
2020-04-21 16:33:21 +02:00
aa7b3c6c0e
tests: web: Explicitly wait for the HTTP port.
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* gnu/tests/web.scm (run-webserver-test)["HTTP port ready"]: New test.
2020-04-21 16:33:21 +02:00
a295a1ca29
tests: ssh: Explicitly wait for port 22.
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Previously we could occasionally try to connect before the server is
actually listening, both for OpenSSH and Dropbear.
* gnu/tests/ssh.scm (run-ssh-test)["wait for port 22"]: New test.
2020-04-21 16:33:21 +02:00
d10e7a348c
gnu: guile-xapian: Update to 0.1.0.
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* gnu/packages/guile-xyz.scm (guile-xapian): Update to 0.1.0.
2020-04-21 14:34:47 +02:00
0e64f12db5
gnu: Add python-rdflib-jsonld.
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* gnu/packages/rdf.scm (python-rdflib-jsonld): New variable.
2020-04-21 12:41:47 +03:00
5d29808bea
gnu: rdf.scm: Use license: prefix.
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* gnu/packages/rdf.scm: Use a 'license:' prefix for package licenses
instead of only importing a select number of licenses.
2020-04-21 12:38:19 +03:00
5327b399a8
gnu: Add u-boot-pinebook-pro-rk3399.
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* gnu/packages/bootloaders (u-boot-pinebook-pro-rk3399): New variable.
* gnu/packages/patches/u-boot-DT-for-Pinebook-Pro.patch: New file.
* gnu/packages/patches/u-boot-add-boe-nv140fhmn49-display.patch: New file.
* gnu/packages/patches/u-boot-gpio-keys-binding-cons.patch: New file.
* gnu/packages/patches/u-boot-leds-common-binding-con.patch: New file.
* gnu/packages/patches/u-boot-support-Pinebook-Pro-laptop.patch: New file.
* gnu/packages/patches/u-boot-video-rockchip-fix-build.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add new patches.
* gnu/bootloader/u-boot.scm (install-pinebook-pro-rk3399-u-boot,
u-boot-pinebook-pro-rk3399-bootloader): New variable.
Co-authored-by: Jan Nieuwenhuizen <janneke@gnu.org>
2020-04-20 19:13:35 -07:00
41169f21e6
gnu: liblinphone: Fix icons.
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* gnu/packages/linphone.scm (liblinphone): Fix icons.
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2020-04-20 21:50:27 -04:00
ce5f4701d1
gnu: obs: Update to 25.0.7.
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* gnu/packages/video (obs): Update to 25.0.7.
2020-04-20 15:10:18 -07:00
71977a6c59
Revert "system: Don’t create a module database when no modules are available."
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This reverts commit b2fff3b5dehttps://bugs.gnu.org/40713 >.
Reported by pkill9 <pkill9@runbox.com>.
This commit is incorrect: its effect depends on whether KERNEL's build
output is already available in the store, it breaks with non-package
kernels as reported at <https://bugs.gnu.org/40713 >, and the
LINUX-MODULE-DATABASE hook is required at all times since
5c79f23863
2020-04-21 00:06:40 +02:00
a322e9d16b
services: etc: Detect and report duplicate entries.
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Fixes <https://bugs.gnu.org/40729 >.
Reported by Christopher Baines <mail@cbaines.net>.
* gnu/services.scm (files->etc-directory)[assert-no-duplicates]: New
procedure.
Use it.
2020-04-21 00:06:40 +02:00
b25ecfa2e0
services: dovecot: 'stop' method returns #f upon success.
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* gnu/services/mail.scm (dovecot-shepherd-service)[stop]: Use 'invoke'
instead of 'make-forkexec-constructor'. Previously, the 'stop' method
would return the PID of the "dovecot stop" process, which would be
interpreted as a failure to stop the service.
2020-04-21 00:06:40 +02:00
7d903d2ff7
services: Don't use the deprecated 'make-forkexec-constructor' call.
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Passing 'make-forkexec-constructor' a string or several string arguments
has been deprecated since dmd 0.1.
* gnu/services/base.scm (rngd-service-type): In 'start' method, pass a
list as the first argument to 'make-forkexec-constructor'.
* gnu/services/desktop.scm (bluetooth-shepherd-service): Likewise.
* gnu/services/spice.scm (spice-vdagent-shepherd-service): Likewise.
2020-04-21 00:06:40 +02:00
b6cb4aeff8
gnu: mcron: Remove now unneeded phase.
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This is a followup to a52aa7fdef
2020-04-21 00:06:39 +02:00
b023a8acd3
gnu: cgit: Update Git source code to 2.25.4.
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* gnu/packages/version-control.scm (cgit)[inputs]: Update git-source to 2.25.4.
2020-04-20 16:21:08 -04:00
781af06533
gnu: Git: Update to 2.26.2 [fixes CVE-2020-11008].
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* gnu/packages/version-control.scm (git): Update to 2.26.2.
[native-inputs]: Update git-manpages.
2020-04-20 16:21:04 -04:00
Paul Garlick
Guillaume Le Vaillant
Mathieu Othacehe
Ludovic Courtès
Efraim Flashner
Pierre Neidhardt
Diego Nicola Barbato
Christopher Lemmer Webber
Alexandros Theodotou
Nicolas Goaziou
John Soo
Joseph LaFreniere
Marius Bakke
Ricardo Wurmus
Boris A. Dekshteyn
Christopher Howard
Roel Janssen
Konrad Hinsen
Björn Höfling
Oleg Pykhalov
Vincent Legoll
Alex McGrath
Raghav Gururajan
Jakub Kądziołka
Maxim Cournoyer
Brice Waegeneire
Christopher Baines
Lars-Dominik Braun
Leo Famulari
Eric Brown
Giacomo Leidi
Evan Straw
Arun Isaac
Vagrant Cascadian
Boris A. Dekshteyn
Holger Peters
Oskar Köök
TomZ
Matthew Kraai
Mark H Weaver
Pierre Langlois
Jack Hill
Ludovic Courtès
Naga Malleswari
Tobias Geerinckx-Rice
Ryan Prior
Brendan Tildesley
Alberto Eleuterio Flores Guerrero
Danny Milosavljevic
Felix Gruber
Andreas Enge
Michael Rohleder
Pjotr Prins