Roel Janssen
|
5f16d1e47d
|
gnu: r-genomicalignments: Update to 1.12.0.
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.12.0.
|
2017-04-28 11:04:59 +02:00 |
|
Roel Janssen
|
d006ee31af
|
gnu: r-summarizedexperiment: Update to 1.6.0.
* gnu/packages/bioinformatics.scm (r-summarizedexperiment):
[source]: Update to 1.6.0,
[propagated-inputs]: Add r-delayedarray.
|
2017-04-28 11:04:58 +02:00 |
|
Roel Janssen
|
6bf5543be8
|
gnu: r-rsamtools: Update to 1.28.0.
* gnu/packages/bioinformatics.scm (r-rsamtools): Update to 1.28.0.
|
2017-04-28 11:04:57 +02:00 |
|
Roel Janssen
|
3ed41af6b5
|
gnu: r-biostrings: Update to 2.44.0.
* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.44.0.
|
2017-04-28 11:04:56 +02:00 |
|
Roel Janssen
|
502da6ffc7
|
gnu: r-biocparallel: Update to 1.10.0.
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.10.0.
|
2017-04-28 11:04:55 +02:00 |
|
Roel Janssen
|
78e7a589c9
|
gnu: r-biomart: Update to 2.32.0.
* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.32.0.
|
2017-04-28 11:04:47 +02:00 |
|
Roel Janssen
|
aafaab22d3
|
gnu: r-annotationdbi: Update to 1.38.0.
* gnu/packages/bioinformatics.scm (r-annotationdbi): Update to 1.38.0.
|
2017-04-28 11:04:46 +02:00 |
|
Roel Janssen
|
b2fff403c8
|
gnu: r-biobase: Update to 2.36.0.
* gnu/packages/bioinformatics.scm (r-biobase): Update to 2.36.0.
|
2017-04-28 11:04:44 +02:00 |
|
Roel Janssen
|
1859712bef
|
gnu: r-genomicranges: Update to 1.28.0.
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.28.0.
|
2017-04-28 11:04:42 +02:00 |
|
Roel Janssen
|
17a02f5149
|
gnu: r-xvector: Update to 0.16.0.
* gnu/packages/bioinformatics.scm (r-xvector): Update to 0.16.0.
|
2017-04-28 11:04:42 +02:00 |
|
Roel Janssen
|
abf5a14e11
|
gnu: r-limma: Update to 3.32.0.
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.32.0.
|
2017-04-28 11:04:41 +02:00 |
|
Roel Janssen
|
d2d7af9832
|
gnu: r-variantannotation: Update to 1.22.0.
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.22.0.
|
2017-04-28 11:04:40 +02:00 |
|
Roel Janssen
|
00ffd55fa1
|
gnu: r-edger: Update to 3.18.0.
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.18.0.
|
2017-04-28 11:04:39 +02:00 |
|
Roel Janssen
|
38b99ccc57
|
gnu: r-genomeinfodb: Update to 1.12.0.
* gnu/packages/bioinformatics.scm (r-genomeinfodb): [source] Update to 1.12.0,
[propagated-inputs]: Add r-genomeinfodbdata.
|
2017-04-28 11:04:37 +02:00 |
|
Roel Janssen
|
7d9ab5d920
|
gnu: r-iranges: Update to 2.10.0.
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.10.0.
|
2017-04-28 11:04:36 +02:00 |
|
Roel Janssen
|
f1f380185b
|
gnu: r-s4vectors: Update to 0.14.0.
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.14.0.
|
2017-04-28 11:04:34 +02:00 |
|
Roel Janssen
|
9b02d49cb0
|
gnu: r-dnacopy: Update to 1.50.0.
* gnu/packages/bioinformatics.scm (r-dnacopy): Update to 1.50.0.
|
2017-04-28 11:04:33 +02:00 |
|
Roel Janssen
|
2e11beec48
|
gnu: r-bioccheck: Update to 1.12.0.
* gnu/packages/bioinformatics.scm (r-bioccheck): Update to 1.12.0.
|
2017-04-28 11:04:32 +02:00 |
|
Roel Janssen
|
3bef24c968
|
gnu: r-biocstyle: Update to 2.4.0.
* gnu/packages/bioinformatics.scm (r-biocstyle): [source] Update to 2.4.0.
[propagated-inputs]: Add r-bookdown, r-knitr, r-rmarkdown, r-yaml.
|
2017-04-28 11:04:31 +02:00 |
|
Roel Janssen
|
68eac34974
|
gnu: r-biocviews: Update to 1.44.0.
* gnu/packages/bioinformatics.scm (r-biocviews): Update to 1.44.0.
|
2017-04-28 11:04:30 +02:00 |
|
Roel Janssen
|
3bef15286a
|
gnu: r-biocinstaller: Update to 1.26.0.
* gnu/packages/bioinformatics.scm (r-biocinstaller): Update to 1.26.0.
|
2017-04-28 11:04:28 +02:00 |
|
Roel Janssen
|
28a5b3f2c6
|
gnu: r-biocgenerics: Update to 0.22.0.
* gnu/packages/bioinformatics.scm (r-biocgenerics): Update to 0.22.0.
|
2017-04-28 11:04:26 +02:00 |
|
Roel Janssen
|
795a604526
|
gnu: r-grohmm: Update to 1.10.0.
* gnu/packages/bioinformatics.scm (r-grohmm): Update to 1.10.0.
|
2017-04-28 11:04:25 +02:00 |
|
Roel Janssen
|
026dc7e4fc
|
gnu: r-systempiper: Update to 1.10.0.
* gnu/packages/bioinformatics.scm (r-systempiper): Update to 1.10.0.
|
2017-04-28 11:04:24 +02:00 |
|
Roel Janssen
|
34c276f761
|
gnu: r-shortread: Update to 1.34.0.
* gnu/packages/bioinformatics.scm (r-shortread): Update to 1.34.0.
|
2017-04-28 11:04:22 +02:00 |
|
Roel Janssen
|
9511773423
|
gnu: r-gostats: Update to 2.42.0.
* gnu/packages/bioinformatics.scm (r-gostats): Update to 2.42.0.
|
2017-04-28 11:04:21 +02:00 |
|
Roel Janssen
|
ca0289aee7
|
gnu: r-category: Update to 2.42.0.
* gnu/packages/bioinformatics.scm (r-category): Update to 2.42.0.
|
2017-04-28 11:04:20 +02:00 |
|
Roel Janssen
|
c584a07ffd
|
gnu: r-gseabase: Update to 1.38.0.
* gnu/packages/bioinformatics.scm (r-gseabase): Update to 1.38.0.
|
2017-04-28 11:04:19 +02:00 |
|
Roel Janssen
|
8ab6f241ea
|
gnu: r-rbgl: Update to 1.52.0.
* gnu/packages/bioinformatics.scm (r-rbgl): Update to 1.52.0.
|
2017-04-28 11:04:16 +02:00 |
|
Roel Janssen
|
46972a4427
|
gnu: r-annotationforge: Update to 1.18.0.
* gnu/packages/bioinformatics.scm (r-annotationforge): Update to 1.18.0.
|
2017-04-28 11:04:12 +02:00 |
|
Roel Janssen
|
3ae74e451c
|
gnu: r-deseq2: Update to 1.16.0.
* gnu/packages/bioinformatics.scm (r-deseq2): Update to 1.16.0.
|
2017-04-28 11:04:09 +02:00 |
|
Roel Janssen
|
b5bc3a3963
|
gnu: r-genefilter: Update to 1.58.0.
* gnu/packages/bioinformatics.scm (r-genefilter): Update to 1.58.0.
|
2017-04-28 11:04:06 +02:00 |
|
Roel Janssen
|
97a50e4f34
|
gnu: r-geneplotter: Update to 1.54.0.
* gnu/packages/bioinformatics.scm (r-geneplotter): Update to 1.54.0.
|
2017-04-28 11:03:59 +02:00 |
|
Roel Janssen
|
dbab99b6d2
|
gnu: r-annotate: Update to 1.54.0.
* gnu/packages/bioinformatics.scm (r-annotate): Update to 1.54.0.
|
2017-04-28 11:03:47 +02:00 |
|
Roel Janssen
|
ffef27f3d2
|
gnu: Add r-genomeinfodbdata.
* gnu/packages/bioinformatics.scm (r-genomeinfodbdata): New variable.
|
2017-04-28 10:17:06 +02:00 |
|
Roel Janssen
|
71e34e6b5b
|
gnu: Add r-delayedarray.
* gnu/packages/bioinformatics.scm (r-delayedarray): New variable.
|
2017-04-28 10:15:12 +02:00 |
|
Roel Janssen
|
2abfc5b827
|
gnu: Add r-bookdown.
* gnu/packages/bioinformatics.scm (r-bookdown): New variable.
|
2017-04-28 10:09:31 +02:00 |
|
Ricardo Wurmus
|
31c374e081
|
gnu: python-pysam: Disable tests.
* gnu/packages/bioinformatics.scm (python-pysam): Disable tests.
|
2017-04-25 14:05:59 +02:00 |
|
Ricardo Wurmus
|
b2955e224e
|
gnu: python-pysam: Fix tests, again.
* gnu/packages/bioinformatics.scm (python-pysam)[arguments]: Run nosetests
explicitly with a single process.
|
2017-04-24 18:46:28 +02:00 |
|
Efraim Flashner
|
c136240efc
|
gnu: diamond: Enable building on all architectures.
* gnu/packages/bioinformatics.scm (diamond)[supported-systems]: Remove
field.
|
2017-04-24 19:30:10 +03:00 |
|
Ricardo Wurmus
|
1a84edeb0b
|
gnu: r-seqminer: Update to 5.9.
* gnu/packages/bioinformatics.scm (r-seqminer): Update to 5.9.
|
2017-04-22 23:30:31 +02:00 |
|
Ben Woodcroft
|
a7d12a9e71
|
gnu: proteinortho: Update to 5.16.
* gnu/packages/bioinformatics.scm (proteinortho): Update to 5.16.
|
2017-04-21 23:03:56 +10:00 |
|
Ben Woodcroft
|
37199768e8
|
gnu: diamond: Update to 0.8.38.
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.38.
|
2017-04-21 23:03:55 +10:00 |
|
Tobias Geerinckx-Rice
|
d1e4ad1b02
|
gnu: Fix typos in descriptions.
* gnu/packages/admin.scm (di)[description]: Likewise.
* gnu/packages/bioinformatics.scm (r-annotate)[description]: Likewise.
* gnu/packages/datastructures.scm (sparsehash)[description]: Likewise.
* gnu/packages/dns.scm (knot)[description]: Likewise.
* gnu/packages/emacs.scm (emacs-idle-highlight)[synopsis, description]:
Likewise.
* gnu/packages/gnome.scm (libpeas)[description]: Likewise.
* gnu/packages/gtk.scm (python2-pygtk)[description]: Likewise.
* gnu/packages/kde-frameworks.scm (kactivities)[description]: Fix typo.
* gnu/packages/libevent.scm (perl-anyevent)[description]: Likewise.
* gnu/packages/machine-learning.scm (ghmm)[description]: Likewise.
* gnu/packages/mail.scm (mlmmj)[description]: Likewise.
* gnu/packages/maths.scm (vc)[description]: Likewise.
* gnu/packages/music.scm (gx-super-fuzz-lv2)[description]: Likewise.
* gnu/packages/networking.scm (nload)[description]: Likewise.
* gnu/packages/python.scm (python-execnet)[description]: Likewise.
* gnu/packages/terminals.scm (tilda)[description]: Likewise.
* gnu/packages/python.scm (python-execnet, python-tables)
(python2-coverage-test-runner, python2-rope)[description]: Likewise.
|
2017-04-17 02:04:08 +02:00 |
|
Ben Woodcroft
|
88eb119f95
|
gnu: mafft: Update to 7.310.
* gnu/packages/bioinformatics.scm (mafft): Update to 7.310.
|
2017-04-14 15:19:37 +10:00 |
|
Ben Woodcroft
|
e9e0fab079
|
gnu: raxml: Update to 8.2.10.
* gnu/packages/bioinformatics.scm (raxml): Update to 8.2.10.
|
2017-04-09 21:44:14 +10:00 |
|
Ricardo Wurmus
|
6acdff5875
|
gnu: r-rsamtools: Update to 1.26.2.
* gnu/packages/bioinformatics.scm (r-rsamtools): Update to 1.26.2.
|
2017-04-09 13:34:53 +02:00 |
|
Ricardo Wurmus
|
dc8ebe43af
|
gnu: r-biocparallel: Update to 1.8.2.
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.8.2.
|
2017-04-09 13:34:53 +02:00 |
|
Ricardo Wurmus
|
1d65b5379b
|
gnu: r-vegan: Update to 2.4-3.
* gnu/packages/bioinformatics.scm (r-vegan): Update to 2.4-3.
[arguments]: Remove build phase "revert-test-deletion".
[native-inputs]: Remove "r-vegan-delete-tests-patch".
|
2017-04-08 10:25:50 +02:00 |
|
Ben Woodcroft
|
37982693ca
|
gnu: vsearch: Update to 2.4.3.
* gnu/packages/bioinformatics.scm (vsearch): Update to 2.4.3.
|
2017-04-07 21:35:07 +10:00 |
|