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Author SHA1 Message Date
Clément Lassieur 85cfb0e9e6
gnu: Add python-intelhex. 
* gnu/packages/python-xyz.scm (python-intelhex): New variable.
 2019-11-19 16:09:00 +01:00
Ludovic Courtès 0d8a8234b5
gnu: hwloc: Adjust references to 'hwloc'. 
This is a followup to 8ec7ca22d3, which
led to a stack overflow (cyclic graph) when attempting to build HWLOC-2.

* gnu/packages/mpi.scm (hwloc-2): Refer to HWLOC-1 instead of HWLOC.
 2019-11-19 11:32:48 +01:00
Alexandros Theodotou 600f680dca
gnu: Add font-dseg. 
* gnu/packages/fonts.scm (font-dseg): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-11-19 10:51:53 +01:00
Pierre Langlois e30bb63c29
gnu: Add emacs-ample-theme. 
* gnu/packages/emacs-xyz.scm (emacs-ample-theme): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-11-19 10:51:53 +01:00
Ludovic Courtès 8ec7ca22d3
gnu: hwloc: Default to 2.x. 
* gnu/packages/mpi.scm (hwloc): Rename to...
(hwloc-1): ... this.
(hwloc-2): Adjust 'inherit' clause accordingly.
(hwloc): New variable.
 2019-11-19 10:51:53 +01:00
Efraim Flashner 10e73bbc5e
gnu: spice-gtk: Build with vala support. 
* gnu/packges/spice.scm (spice-gtk)[native-inputs]: Add vala.
[arguments]: Add '--enable-vala' to configure-flags.
 2019-11-19 09:25:12 +02:00
Maxim Cournoyer 63edbb65e4
gnu: emacs-protobuf-mode: Rename the set-emacs-load-path phase. 
This is a follow up commit to e1d31e6457.

* gnu/packages/protobuf.scm (emacs-protobuf-mode): Add the
change-working-directory phase before the add-source-to-load-path phase
instead of before the set-emacs-load-path phase.
 2019-11-19 13:11:16 +09:00
Maxim Cournoyer ffb2316548
gnu: emacs-erlang: Rename the set-emacs-load-path phase. 
This is a follow up commit to e1d31e6457.

* gnu/packages/erlang.scm (emacs-erlang): Add the change-working-directory
phase before the add-source-to-load-path phase instead of before the
set-emacs-load-path phase.
 2019-11-19 13:07:06 +09:00
Maxim Cournoyer ed94123667
gnu: emacs-pdf-tools: Adapt phase name. 
Follow up commit to c51d4c7746.

* gnu/packages/emacs-xyz.scm (emacs-pdf-tools): Add the emacs-install phase
after the emacs-add-source-to-load-path instead of after the
emacs-set-emacs-load-path phase.

Reported-by: Brett Gilio <brettg@posteo.net>
 2019-11-19 12:58:54 +09:00
Maxim Cournoyer 418febb54f
gnu: emacs-scel: Fix build. 
This is a follow up commit to e1d31e6457.

* gnu/packages/emacs-xyz.scm (emacs-scel): Fix build.
 2019-11-19 12:55:04 +09:00
Maxim Cournoyer 1bb39982f1
gnu: emacs-realgud: Fix build. 
This is a follow up commit to e1d31e6457.

* gnu/packages/emacs-xyz.scm (emacs-realgud): Fix build.
 2019-11-19 12:44:00 +09:00
Maxim Cournoyer c51d4c7746
gnu: emacs-pdf-tools: Fix build. 
This is a follow up commit to e1d31e6457.

* gnu/packages/emacs-xyz.scm (emacs-pdf-tools): Fix build.
 2019-11-19 12:37:17 +09:00
Maxim Cournoyer b44357d02a
gnu: emacs-forge: Fix build. 
This is a follow up commit to e1d31e6457.

* gnu/packages/emacs-xyz.scm (emacs-forge): Fix build.
 2019-11-19 12:07:32 +09:00
Oleg Pykhalov e26867f74b
gnu: tome4: Update to 1.6.1. 
* gnu/packages/games.scm (tome4): Update to 1.6.1.
 2019-11-19 00:07:40 +03:00
Guillaume Le Vaillant 900ef20b1d
linux-boot: Don't ignore options when mounting root file system. 
Fixes <https://bugs.gnu.org/37977>.

* gnu/build/linux-boot.scm (mount-root-file-system): Add the 'options'
  keyword argument and use it when mounting the root file system.
  (boot-system): Pass the root file system options to
  'mount-root-file-system'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-11-18 12:18:42 +01:00
David Wilson 5544f1e3ea
gnu: emacs-eshell-z: Update to 0.4. 
* gnu/packages/emacs-xyz.scm (emacs-eshell-z): Update to 0.4.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2019-11-18 09:59:22 +02:00
Mathieu Othacehe 4de11dda72
gnu: emacs-ccls: Propagate ccls. 
* gnu/packages/emacs-xyz.scm (emacs-ccls)[propagated-inputs]: Add ccls.
 2019-11-18 08:51:47 +01:00
Maxim Cournoyer 47b3b4c2aa
gnu: emacs: Adapt the autoloads auxiliary code to use EMACSLOADPATH. 
The Elisp directories to scan for autoloads are now taken from EMACSLOADPATH
instead of from the user profile, environment profile or system profile.
Manually adding the Elisp directories to the `load-path' is no longer
necessary, as this is covered by Emacs when they are in EMACSLOADPATH.  The
caching logic is also removed, as this code is not typically run often and the
gain is marginal (loading autoloads files is cheap).

* gnu/packages/aux-files/emacs/guix-emacs.el (guix-emacs-directory)
(guix-emacs-subdirs, guix-emacs-directories): Remove procedures.
(guix-emacs-find-autoloads): Filter the directory entries by passing the
regexp to `directory-files' directly, which is ten times faster.  Remove
deduplication.
(guix-emacs-autoloads-regexp): Remove the group, which used to filter out the
file extension; it no longer works this way due to passing the regexp to the
`directory-files' procedure directly, which doesn't care about groups.
(guix-emacs-autoload-packages): Update doc.  Search package directories from
EMACSLOADPATH.  Do not populate the load-path.  Remove cache.
 2019-11-18 14:34:41 +09:00
Maxim Cournoyer 215a45d9b8
gnu: emacs: Locate Elisp libraries via EMACSLOADPATH. 
* gnu/packages/emacs.scm (emacs): Add a search path specification for
EMACSLOADPATH.
 2019-11-18 14:34:40 +09:00
Maxim Cournoyer 67ed544212
vm: Honor the VOLATILE? parameter when producing a system disk image. 
* gnu/system/vm.scm (system-disk-image): Honor the VOLATILE? parameter instead
of hard coding its value to #t.

Reported-by: Jelle Licht <jlicht@fsfe.org>
 2019-11-18 14:07:12 +09:00
Maxim Cournoyer c09903acae
linux-boot: Fix indentation. 
* gnu/build/linux-boot.scm (boot-system): Re-indent.
 2019-11-18 13:22:16 +09:00
Maxim Cournoyer d2ae8a25db
file-systems: Fix docstring. 
* gnu/build/file-systems.scm (mount-file-system): Clean the documentation from
the no longer existing parameters (these are now encapsulated within a
<file-system> record).
 2019-11-18 13:22:16 +09:00
Maxim Cournoyer 1a034f043e
tests: install: Fix typo. 
* gnu/tests/install.scm (run-install): Fix typo in docstring.
 2019-11-18 13:22:15 +09:00
Ludovic Courtès 65209ffabd
gnu: gsettings-desktop-schemas: Fix file name of default background. 
Reported by Alexandros Theodotou <alex@zrythm.org>
at <https://lists.gnu.org/archive/html/guix-devel/2019-11/msg00157.html>.

* gnu/packages/gnome.scm (gsettings-desktop-schemas)[arguments]: New
field.
[inputs]: Add GNOME-BACKGROUNDS.
 2019-11-17 23:14:54 +01:00
Ludovic Courtès bead6dcb58
gnu: slurm: Allow builds on 32-bit platforms. 
Fixes a regression introduced in
7c96befa52 whereby ./configure would fail
on 32-bit platforms due to 32-bit support being "deprecated".

* gnu/packages/parallel.scm (slurm)[arguments]: Pass
"--enable-deprecated" configure flag unless 'target-64bit?' returns
true.
 2019-11-17 23:14:54 +01:00
Jesse Gibbons 6ba6a1c103
gnu: python-hy: Set HOME to /tmp before install 
Fixes <https://bugs.gnu.org/38241>.

* gnu/packages/python-xyz.scm (python-hy)[arguments]: Add custom
'set-HOME phase before the 'install phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-11-17 23:14:54 +01:00
Nicolas Goaziou ea04211358
gnu: hedgewars: Update to 1.0.0. 
* gnu/packages/games.scm (hedgewars): Update to 1.0.0.
[arguments]: Remove unnecessary phases.
 2019-11-17 23:12:54 +01:00
Mathieu Othacehe 57c7bfec62
gnu: Add clang-toolchain. 
In the same spirit that gcc-toolchain provides a complete gcc toolchain
suitable for user profile installation, add a make-clang-toolchain function
and use it to create clang-toolchain, clang-toolchain-7 and clang-toolchain-6
packages.

* gnu/packages/llvm.scm (make-clang-toolchain): New method.
(clang-toolchain): New public variable defined using previous method,
(clang-toolchain-7): ditto,
(clang-toolchain-6): ditto.
 2019-11-17 11:33:11 +01:00
David Truby 496bbeee7a
gnu: clang-from-llvm: Fix libstdc++ header location search. 
Make clang use libstdc++ from gcc package. In the future, the build of clang
could be parametrized to build clang with libstdc++ support or with libcxx
support.

* gnu/packages/llvm.scm (clang-from-llvm)[arguments]: Make clang look for
libstdc++ in the right location, which is gcc c++ includes directory.

Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
 2019-11-17 11:25:59 +01:00
Efraim Flashner cf9dad6c87
gnu: librsvg-next: Update to 2.46.3. 
* gnu/packages/gnome.scm (librsvg-next): Update to 2.46.3.
[license]: Update to lgpl2.1+.
 2019-11-17 09:24:23 +02:00
Efraim Flashner b3820edc99
gnu: librsvg-next: Don't use name variable in source uri. 
* gnu/packages/gnome.scm (librsvg-next)[source]: Hardcode name.
 2019-11-17 09:23:41 +02:00
Mark H Weaver 2484e0b3e4
gnu: linux-libre: Update deblob scripts. 
* gnu/packages/linux.scm (deblob-scripts-5.3): Update to 5.3.11.
(deblob-scripts-5.19): Update to 4.19.84.
(deblob-scripts-4.14): Update to 4.14.154.
(deblob-scripts-4.9): Update to 4.9.201.
(deblob-scripts-4.4): Update to 4.4.201.
 2019-11-16 17:40:06 -05:00
Kei Kebreau fbdc87a7cb
gnu: crispy-doom: Update to 5.6.3. 
* gnu/packages/games.scm (crispy-doom): Update to 5.6.3.
 2019-11-16 17:26:36 -05:00
Oskar Köök 38df1a5bcd
gnu: elixir: Update to 1.9.4. 
* gnu/packages/elixir.scm (elixir): Update to 1.9.4.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2019-11-16 23:10:24 +02:00
David Wilson bf5dea3aa4
gnu: emacs-desktop-environment: Update to 0.3.0. 
* gnu/packages/emacs-xyz.scm (emacs-desktop-environment): Update to 0.3.0.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2019-11-16 23:05:34 +02:00
Mathieu Othacehe 191a9a26b5
gnu: linux-libre: Remove cross-libc from CROSS_CPATH. 
* gnu/packages/linux.scm (make-linux-libre*)[arguments]: Do not unset
CROSS_CPATH completely, instead remove cross-libc from CROSS_CPATH in the same
way that libc is removed from CPATH.
 2019-11-16 20:40:15 +01:00
Efraim Flashner 4edc4f57bd
gnu: keepassxc: Update to 2.5.1. 
* gnu/packages/password-utils.scm (keepassxc): Update to 2.5.1.
 2019-11-16 21:11:03 +02:00
Kei Kebreau 81d7cd592e
gnu: hyperrogue: Update to 11.2d. 
* gnu/packages/games.scm (hyperrogue): Update to 11.2d.
 2019-11-16 12:32:30 -05:00
Björn Höfling 30502f1dd6
php: Enable more extentions. 
* gnu/packages/php.scm (php)[arguments]: Use libzip instead of zip for
the "--with-libzip" argument, enable intl and zip.
[inputs]: Add icu4c, libzip. Remove zip.
 2019-11-16 18:00:24 +01:00
Björn Höfling a9b15d4c7f
gnu: libzip: Add more inputs. 
This enables encryption.

* gnu/packages/compression.scm (libzip)[inputs]: Add gnutls, openssl.
 2019-11-16 18:00:23 +01:00
Josh Holland 264a63d643
gnu: Add redshift-wayland 
* gnu/packages/xdisorg.scm (redshift-wayland): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-11-16 17:43:49 +01:00
Oskar Köök 2148e68d33
gnu: elixir: Update to 1.9.2. 
* gnu/packages/elixir.scm (elixir): Update to 1.9.2.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-11-16 17:43:49 +01:00
Ludovic Courtès b1077c2234
gnu: openmpi: Silence UCX warnings when running tests. 
* gnu/packages/mpi.scm (%openmpi-setup): Set "UCX_LOG_LEVEL".
 2019-11-16 17:43:49 +01:00
Ludovic Courtès 2401806bdb
gnu: ucx: Avoid relying on /sys/class/net. 
This fixes test failures of packages that use Open MPI, whereby UCX
would error out due to /sys/class/net being unavailable in the build
chroot that the daemon sets up.

* gnu/packages/patches/ucx-tcp-iface-ioctl.patch: New file.
* gnu/packages/fabric-management.scm (ucx)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
 2019-11-16 17:43:49 +01:00
Mark H Weaver bd7df85ea4
gnu: linux-libre@4.9: Update to 4.9.202. 
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.202.
(linux-libre-4.9-pristine-source): Update hash.
 2019-11-16 11:39:42 -05:00
Mark H Weaver 8459cf5756
gnu: linux-libre@4.4: Update to 4.4.202. 
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.202.
(linux-libre-4.4-pristine-source): Update hash.
 2019-11-16 11:38:37 -05:00
Ludovic Courtès 6f160c5c38
Revert "gnu: openmpi: Pass explicit "--with-*" configure flags." 
This reverts commit eaa52b5baa,
which would lead to build failures on systems other than x86_64-linux.
 2019-11-15 23:28:17 +01:00
Ludovic Courtès 96a469f1cd
gnu: openmpi: Fix typo. 
* gnu/packages/mpi.scm (openmpi)[inputs]: For UCX, check the supported
systems of UCX, not PSM2.
 2019-11-15 23:28:17 +01:00
Eric Bavier 257e63044f
gnu: tomb: Use system's sudo. 
* gnu/packages/crypto.scm (tomb)[arguments]: Disallow references to the "sudo"
input.  Remove it's path from the wrapper.
 2019-11-15 14:59:16 -06:00
Eric Bavier 417df5bb57
gnu: tomb: Add lsof input for "ps" and "slam". 
* gnu/packages/crypto.scm (tomb)[inputs]: Add lsof.
[arguments]: Add it to the wrapper PATH.
 2019-11-15 14:59:16 -06:00
Eric Bavier 4535eb91c3
gnu: tomb: Update to 2.7. 
* gnu/packages/patches/tomb-fix-errors-on-open.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/crypto.scm (tomb): Update to 2.7.
[source]: Use the patch.
 2019-11-15 14:59:07 -06:00
Ivan Vilata-i-Balaguer 528b52390d
gnu: CMake: Add version 3.15.5. 
Add CMake version 3.15.5 but do not replace the existing version to avoid
triggering the rebuild of all CMake-based packages.

See <https://issues.guix.gnu.org/issue/38060>.

* gnu/packages/cmake.scm (cmake-3.15.5): Add CMake 3.15.5.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2019-11-15 19:09:13 +01:00
Marius Bakke ba261f6318
gnu: ungoogled-chromium: Update to 78.0.3904.97-0.acaf163. 
* gnu/packages/chromium.scm (%preserved-third-party-files): Adjust for
Chromium 78.
(%chromium-version): Set to 78.0.3904.97.
(%ungoogled-revision): Set to acaf16383f264d8a2f24142ad054c9b4355771d3.
(%debian-revision): Set to e43d74632091324774a5049668782dba7b09cf72.
(%chromium-origin, %ungoogled-origin, %debian-origin): Update hashes.
(gentoo-patches, %auxiliary-patches): Remove variables.
(ungoogled-chromium-source): Adjust Debian patches for 78.  Don't apply
%AUXILIARY-PATCHES.
(libvpx/chromium): New variable.
(ungoogled-chromium)[arguments]: Add substitution for ICU headers.  Adjust
other substitutions for 78.  Remove obsolete workaround.  Increase ulimit in
'build' phase.  Don't install '22x22' icon, which no longer exists.
[inputs]: Change from LIBVPX to LIBVPX/CHROMIUM.
[properties]: Remove HIDDEN?.
(ungoogled-chromium-wayland)[inputs]: Don't remove inherited inputs.
(ungoogled-chromium-is-deprecated, ungoogled-chromium-wayland-is-deprecated):
Remove variables.
 2019-11-15 19:09:13 +01:00
Marius Bakke 97b672d99f
gnu: gn: Enable tests. 
* gnu/packages/build-tools.scm (gn)[arguments]: Remove #:tests?.  Override
'check' phase.
 2019-11-15 19:09:13 +01:00
Marius Bakke d922724521
gnu: gn: Update to 0.0-1666.6e5ba2e. 
* gnu/packages/build-tools.scm (gn): Update to 0.0-1666.6e5ba2e.
[arguments]: Do not override LDFLAGS.
 2019-11-15 19:09:13 +01:00
Ludovic Courtès faab7082ab
gnu: openmpi: Raise the priority of the PSM2 component. 
This allows us to get better performance by default on machines with
OmniPath hardware.

* gnu/packages/patches/openmpi-psm2-priority.patch: New file.
* gnu/packages/mpi.scm (openmpi)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
 2019-11-15 17:52:45 +01:00
Ludovic Courtès 348caf3d2c
gnu: psm: Add "debug" output. 
* gnu/packages/linux.scm (psm)[outputs]: New field.
 2019-11-15 17:52:45 +01:00
Ludovic Courtès 58a536bb1b
gnu: openmpi, slurm: Switch to hwloc 2.x. 
* gnu/packages/mpi.scm (openmpi)[inputs]: Switch to HWLOC-2.
* gnu/packages/parallel.scm (slurm)[inputs]: Likewise.
 2019-11-15 17:52:45 +01:00
Ludovic Courtès 8c8e108978
gnu: hwloc: Update to 2.1.0. 
* gnu/packages/mpi.scm (hwloc-2.0): Rename to...
(hwloc-2): ... this.  Update to 2.1.0
(hwloc-2.0): Define as deprecated.
* gnu/packages/opencl.scm (pocl)[inputs]: Adjust accordingly.
 2019-11-15 17:52:45 +01:00
Ludovic Courtès 52cd164aad
gnu: slurm: Build shared libraries only. 
* gnu/packages/parallel.scm (slurm)[arguments]: Pass "--disable-static".
 2019-11-15 17:52:45 +01:00
Ludovic Courtès 7c96befa52
gnu: slurm: Update to 19.05.3-2. 
* gnu/packages/parallel.scm (slurm): Update to 19.05.3-2.
[source](snippet): Keep "contribs/mpi" and its reference in
'Makefile.am'.
[inputs]: Remove OPENSSL.
[arguments]: Remove "--with-ssl".  Add 'install-libpmi' phase.
 2019-11-15 17:52:44 +01:00
Ludovic Courtès c1ea4c0793
gnu: Add Intel MPI Benchmarks. 
* gnu/packages/mpi.scm (intel-mpi-benchmarks): New variable.
 2019-11-15 17:52:44 +01:00
Ludovic Courtès e68f954eb3
gnu: rdma-core: Update to 26.0. 
* gnu/packages/linux.scm (rdma-core): Update to 26.0.
[arguments]: Add "-DRST2MAN_EXECUTABLE=..." to #:configure-flags.
[native-inputs]: Add PYTHON-DOCUTILS.
 2019-11-15 17:52:44 +01:00
Ludovic Courtès 2b14c60d38
gnu: rdma-core: Use the "write" ioctl mode. 
* gnu/packages/linux.scm (rdma-core)[arguments]: Add "-DIOCTL_MODE=write"
to #:configure-flags.
 2019-11-15 17:52:44 +01:00
Ludovic Courtès eaa52b5baa
gnu: openmpi: Pass explicit "--with-*" configure flags. 
* gnu/packages/mpi.scm (openmpi)[arguments]: Pass "--with-ucx",
"--with-psm", and "--with-psm2".
 2019-11-15 17:52:44 +01:00
Ludovic Courtès 3b09bb191c
gnu: ucx: Do not install static libraries. 
* gnu/packages/fabric-management.scm (ucx)[arguments]: Pass
"--disable-static".
 2019-11-15 17:52:44 +01:00
Ludovic Courtès b35f621e45
gnu: ucx: Enable InfiniBand support through Verbs. 
Until now, InfiniBand support was missing, as reported by "ucx_info -d"
on a machine with InfiniBand networking.

* gnu/packages/fabric-management.scm (ucx)[arguments]: Build with
"--with-verbs".
 2019-11-15 17:52:44 +01:00
Kyle Meyer f3560c626d
gnu: git-annex: Update to 7.20191114. 
* gnu/packages/haskell-apps.scm (git-annex): Update to 7.20191114.

Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
 2019-11-15 14:48:32 +01:00
Pierre Langlois bcdf11d6ff
gnu: rtmidi: Update to 4.0.0. 
* gnu/packages/audio.scm (rtmidi): Update to 4.0.0.
[source]: Download tarball from upstream URL rather than the powertab github
fork.
[arguments]: Enable tests.  Remove 'build and 'install phases and add a new
'noconfigure phase to prevent the bootstrap script from invoking configure.
[home-page]: Update homepage to upstream URL.
* gnu/packages/music.scm (powertabeditor)[arguments]: Add phase that substitutes
the rtmidi #include directive to find the header.

Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
 2019-11-15 14:29:57 +01:00
John Soo ae5525c591
gnu: freecad: Update to 0.18.4. 
* gnu/packages/engineering.scm (freecad): Update to 0.18.4.

Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
 2019-11-15 13:50:03 +01:00
Mathieu Othacehe b02a9523b3
gnu: emacs-flycheck-cpplint: Set cpplint path. 
* gnu/packages/emacs-xyz.scm (emacs-flycheck-cpplint)[inputs]: Add cpplint.
[arguments]: Add a set-cpplint-path phase to set the path of cpplint.
 2019-11-15 11:04:23 +01:00
Mathieu Othacehe 7e08be71ac
gnu: Add cpplint. 
* gnu/packages/cpp.scm (cpplint): New variable.
 2019-11-15 10:50:19 +01:00
Tobias Geerinckx-Rice 37d473c5d1
gnu: fluidsynth: Update to 2.0.9. 
* gnu/packages/audio.scm (fluidsynth): Update to 2.0.9.
 2019-11-14 18:01:41 +01:00
Tobias Geerinckx-Rice daa03aca15
gnu: perl-type-tiny: Update to 1.006000. 
* gnu/packages/perl.scm (perl-type-tiny): Update to 1.006000.
 2019-11-14 18:01:40 +01:00
Tobias Geerinckx-Rice 84748e719d
gnu: msitools: Update to 0.100. 
* gnu/packages/package-management.scm (msitools): Update to 0.100.
 2019-11-14 18:01:40 +01:00
Tobias Geerinckx-Rice 3b27ffec0f
gnu: perl-mail-dkim: Update to 0.58. 
* gnu/packages/mail.scm (perl-mail-dkim): Update to 0.58.
 2019-11-14 18:01:40 +01:00
Jan Nieuwenhuizen 99b340f5ee
gnu: Add m2-planet. 
* gnu/packages/mes.scm (m2-planet): New variable.
 2019-11-14 16:41:55 +01:00
Pierre Neidhardt 5a17042e70
gnu: Add emacs-helm-fish-completion. 
* gnu/packages/emacs-xyz.scm (emacs-helm-fish-completion): New variable.
 2019-11-14 15:39:56 +01:00
Ricardo Wurmus 4dcf32b56b
gnu: r-gprofiler: Update to 0.7.0. 
* gnu/packages/bioinformatics.scm (r-gprofiler): Update to 0.7.0.
 2019-11-14 10:14:10 +01:00
Ricardo Wurmus f40fedd8fd
gnu: r-hexbin: Update to 1.28.0. 
* gnu/packages/statistics.scm (r-hexbin): Update to 1.28.0.
 2019-11-14 10:14:10 +01:00
Ricardo Wurmus d458b2a9e5
gnu: r-r-oo: Update to 1.23.0. 
* gnu/packages/statistics.scm (r-r-oo): Update to 1.23.0.
 2019-11-14 10:14:09 +01:00
Ricardo Wurmus f046f43bb8
gnu: r-glmnet: Update to 3.0. 
* gnu/packages/statistics.scm (r-glmnet): Update to 3.0.
[inputs]: Move gfortran from here...
[native-inputs]: ...to here.
[propagated-inputs]: Add r-shape.
 2019-11-14 10:14:09 +01:00
Ricardo Wurmus 3a3ece336b
gnu: r-dt: Update to 0.10. 
* gnu/packages/statistics.scm (r-dt): Update to 0.10.
 2019-11-14 10:14:09 +01:00
Ricardo Wurmus 85d44cf6de
gnu: r-rmarkdown: Update to 1.17. 
* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.17.
 2019-11-14 10:14:08 +01:00
Ricardo Wurmus a713371db1
gnu: r-hms: Update to 0.5.2. 
* gnu/packages/statistics.scm (r-hms): Update to 0.5.2.
 2019-11-14 10:14:08 +01:00
Ricardo Wurmus 2295a17e64
gnu: r-roxygen2: Update to 7.0.0. 
* gnu/packages/statistics.scm (r-roxygen2): Update to 7.0.0.
[propagated-inputs]: Add r-rlang.
 2019-11-14 10:14:08 +01:00
Ricardo Wurmus 30301c0993
gnu: r-r6: Update to 2.4.1. 
* gnu/packages/statistics.scm (r-r6): Update to 2.4.1.
 2019-11-14 10:14:08 +01:00
Ricardo Wurmus 3d2c2a55fd
gnu: r-testthat: Update to 2.3.0. 
* gnu/packages/statistics.scm (r-testthat): Update to 2.3.0.
[propagated-inputs]: Add r-ellipsis and r-pkgload.
 2019-11-14 10:14:08 +01:00
Ricardo Wurmus bc697e716d
gnu: r-knitr: Update to 1.26. 
* gnu/packages/statistics.scm (r-knitr): Update to 1.26.
 2019-11-14 10:14:08 +01:00
Ricardo Wurmus 44ffff99d3
gnu: r-survival: Update to 3.1-7. 
* gnu/packages/statistics.scm (r-survival): Update to 3.1-7.
 2019-11-14 10:14:08 +01:00
Ricardo Wurmus f4061505dc
gnu: r-farver: Update to 2.0.1. 
* gnu/packages/cran.scm (r-farver): Update to 2.0.1.
[propagated-inputs]: Remove r-rcpp.
 2019-11-14 10:14:08 +01:00
Ricardo Wurmus f72874fe26
gnu: r-ggeffects: Update to 0.13.0. 
* gnu/packages/cran.scm (r-ggeffects): Update to 0.13.0.
[propagated-inputs]: Remove r-scales.
 2019-11-14 10:14:08 +01:00
Ricardo Wurmus 389f169a7e
gnu: r-learnr: Update to 0.10.0. 
* gnu/packages/cran.scm (r-learnr): Update to 0.10.0.
[propagated-inputs]: Add r-checkmate, r-ellipsis, and r-renv.
 2019-11-14 10:14:08 +01:00
Ricardo Wurmus a6412edf29
gnu: r-ggfortify: Update to 0.4.8. 
* gnu/packages/cran.scm (r-ggfortify): Update to 0.4.8.
 2019-11-14 10:14:08 +01:00
Ricardo Wurmus 17c5b6fcce
gnu: r-kernlab: Update to 0.9-29. 
* gnu/packages/cran.scm (r-kernlab): Update to 0.9-29.
 2019-11-14 10:14:07 +01:00
Ricardo Wurmus e6f1468c93
gnu: r-bookdown: Update to 0.15. 
* gnu/packages/cran.scm (r-bookdown): Update to 0.15.
 2019-11-14 10:14:07 +01:00
Ricardo Wurmus d4f4b30bbc
gnu: r-future: Update to 1.15.0. 
* gnu/packages/cran.scm (r-future): Update to 1.15.0.
 2019-11-14 10:14:07 +01:00
Ricardo Wurmus 610f2acc7c
gnu: r-rbamtools: Update to 2.16.17. 
* gnu/packages/cran.scm (r-rbamtools): Update to 2.16.17.
 2019-11-14 10:14:06 +01:00
Ricardo Wurmus e5a06add04
gnu: r-fields: Update to 10.0. 
* gnu/packages/cran.scm (r-fields): Update to 10.0.
 2019-11-14 10:14:06 +01:00
Ricardo Wurmus b32172cab6
gnu: r-spam: Update to 2.4-0. 
* gnu/packages/cran.scm (r-spam): Update to 2.4-0.
 2019-11-14 10:14:05 +01:00
Ricardo Wurmus 0da4cb546a
gnu: r-rcppannoy: Update to 0.0.14. 
* gnu/packages/cran.scm (r-rcppannoy): Update to 0.0.14.
 2019-11-14 10:14:05 +01:00
Ricardo Wurmus 5fbd92469d
gnu: r-rvcheck: Update to 0.1.6. 
* gnu/packages/cran.scm (r-rvcheck): Update to 0.1.6.
 2019-11-14 10:14:05 +01:00
Ricardo Wurmus aa3d1dca60
gnu: r-rootsolve: Update to 1.8.1. 
* gnu/packages/cran.scm (r-rootsolve): Update to 1.8.1.
 2019-11-14 10:14:05 +01:00
Ricardo Wurmus 56b88f6c8d
gnu: r-flextable: Update to 0.5.6. 
* gnu/packages/cran.scm (r-flextable): Update to 0.5.6.
 2019-11-14 10:14:05 +01:00
Ricardo Wurmus 7f4025aa83
gnu: r-officer: Update to 0.3.6. 
* gnu/packages/cran.scm (r-officer): Update to 0.3.6.
 2019-11-14 10:14:05 +01:00
Ricardo Wurmus b0fd313e38
gnu: r-rjags: Update to 4-10. 
* gnu/packages/cran.scm (r-rjags): Update to 4-10.
 2019-11-14 10:14:05 +01:00
Ricardo Wurmus 1ca049273c
gnu: r-ggpubr: Update to 0.2.4. 
* gnu/packages/cran.scm (r-ggpubr): Update to 0.2.4.
 2019-11-14 10:14:05 +01:00
Ricardo Wurmus 383ab0daa2
gnu: r-openxlsx: Update to 4.1.3. 
* gnu/packages/cran.scm (r-openxlsx): Update to 4.1.3.
[propagated-inputs]: Add r-rlang and r-stringi.
 2019-11-14 10:14:05 +01:00
Ricardo Wurmus 36b7a23f83
gnu: r-tinytex: Update to 0.17. 
* gnu/packages/cran.scm (r-tinytex): Update to 0.17.
 2019-11-14 10:14:04 +01:00
Ricardo Wurmus 58fb4f3207
gnu: r-xfun: Update to 0.11. 
* gnu/packages/cran.scm (r-xfun): Update to 0.11.
 2019-11-14 10:14:03 +01:00
Ricardo Wurmus aba7435f80
gnu: r-prodlim: Update to 2019.10.13. 
* gnu/packages/cran.scm (r-prodlim): Update to 2019.10.13.
 2019-11-14 10:14:03 +01:00
Ricardo Wurmus 8b4178cd94
gnu: r-rcpp: Update to 1.0.3. 
* gnu/packages/cran.scm (r-rcpp): Update to 1.0.3.
 2019-11-14 10:14:03 +01:00
Ricardo Wurmus 65d81e7513
gnu: r-haven: Update to 2.2.0. 
* gnu/packages/cran.scm (r-haven): Update to 2.2.0.
[propagated-inputs]: Add r-rlang and r-tidyselect.
 2019-11-14 10:14:03 +01:00
Ricardo Wurmus a9b6601908
gnu: Add r-renv. 
* gnu/packages/cran.scm (r-renv): New variable.
 2019-11-14 10:14:03 +01:00
Efraim Flashner 7696af421b
gnu: links: Update to 2.20.2. 
* gnu/packages/web-browsers.scm (links): Update to 2.20.2.
 2019-11-14 10:45:51 +02:00
Alexandros Theodotou bcf851bc4a
gnu: Add avldrums-lv2. 
* gnu/packages/music.scm: (avldrums-lv2): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2019-11-14 00:16:12 +01:00
Alexandros Theodotou 5b1bf92e16
gnu: Add dpf-plugins. 
* gnu/packages/music.scm: (dpf-plugins): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2019-11-14 00:16:12 +01:00
Marius Bakke 2f491b884d
gnu: geonkick: Do not use unstable source tarball. 
* gnu/packages/music.scm (geonkick)[source]: Change to GIT-FETCH.
 2019-11-14 00:16:12 +01:00
Alexandros Theodotou 2ac65b9cbd
gnu: Add geonkick. 
* gnu/packages/music.scm: (geonkick): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2019-11-14 00:16:11 +01:00
Marius Bakke 83ba0e4291
gnu: redkite: Do not use unstable tarball. 
* gnu/packages/audio.scm (redkite)[source]: Change to GIT-FETCH.
 2019-11-14 00:16:11 +01:00
Alexandros Theodotou 74f9a8fbbe
gnu: Add redkite. 
* gnu/packages/audio.scm: (redkite): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2019-11-14 00:16:11 +01:00
Alexandros Theodotou 9a00130a94
gnu: Add zam-plugins. 
* gnu/packages/music.scm: (zam-plugins): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2019-11-14 00:16:11 +01:00
Alexandros Theodotou fe06a6ee70
gnu: Add x42-plugins. 
* gnu/packages/music.scm: (x42-plugins): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2019-11-14 00:16:11 +01:00
Alexandros Theodotou 0f2ce44800
gnu: Add libltc. 
* gnu/packages/audio.scm: (libltc): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2019-11-14 00:16:11 +01:00
Alexandros Theodotou 5182fbe063
gnu: Add sherlock-lv2. 
* gnu/packages/music.scm: (sherlock-lv2): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2019-11-14 00:16:11 +01:00
Marius Bakke 95f6e6dad8
gnu: sratom: Adjust indentation. 
* gnu/packages/audio.scm (sratom): Re-indent.
 2019-11-14 00:16:11 +01:00
Marius Bakke 6e0b18bf09
gnu: sratom: Propagate required inputs. 
* gnu/packages/audio.scm (sratom)[inputs]: Change to ...
[propagated-inputs]: ... this.
 2019-11-14 00:16:11 +01:00
David Wilson 35338b5001
gnu: Add emacs-spacegray-theme. 
* gnu/packages/emacs-xyz.scm (emacs-spacegray-theme) New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-11-13 23:26:36 +01:00
Ludovic Courtès 1f8ca28b9e
services: dbus: Simplify 'dbus-uuidgen' invocation. 
* gnu/services/dbus.scm (dbus-activation): Use the "--ensure" option of
'dbus-uuidgen' instead of forking and redirecting ports.
 2019-11-13 23:26:36 +01:00
Ludovic Courtès 7462a1de22
services: dbus: Log to syslog. 
* gnu/services/dbus.scm (dbus-shepherd-service): Add 'syslogd' to
'requirement'.  Pass the "--syslog-only" command-line option.
 2019-11-13 23:26:36 +01:00
Ludovic Courtès a01d2e300a
services: dbus: Add description. 
* gnu/services/dbus.scm (dbus-root-service-type)[description]: New
field.
 2019-11-13 23:26:36 +01:00
Ludovic Courtès 887fd835a7
tests: "make check-system" uses Guix built with (guix self). 
This is a followup to 7e6d8d366a.
It means that "make check-system" can run tests from (gnu tests install)
much faster because it does not need to build a full 'guix' package.

* gnu/ci.scm (channel-instance->package): Export.
* build-aux/run-system-tests.scm (tests-for-channel-instance): New
procedure, with code formerly in 'run-system-tests'.
(run-system-tests): Call 'interned-file' for SOURCE, and add call to
'tests-for-channel-instance'.
 2019-11-13 23:26:35 +01:00
Julien Lepiller f041db8696
gnu: Add josm. 
* gnu/packages/geo.scm (josm): New variable.
 2019-11-13 22:49:55 +01:00
Julien Lepiller 934b83e45a
gnu: Add java-commons-jcs. 
* gnu/packages/java.scm (java-commons-jcs): New variable.
 2019-11-13 22:49:39 +01:00
Julien Lepiller f31ea164be
gnu: Add java-commons-dbcp. 
* gnu/packages/java.scm (java-commons-dbcp): New variable.
 2019-11-13 22:49:37 +01:00
Julien Lepiller b635d2728e
gnu: Add java-commons-pool. 
* gnu/packages/java.scm (java-commons-pool): New variable.
 2019-11-13 22:49:33 +01:00
Julien Lepiller ff56e6efe3
gnu: Add java-jboss-transaction-api-spec. 
* gnu/packages/java.scm (java-jboss-transaction-api-spec): New variable.
 2019-11-13 22:49:29 +01:00
Julien Lepiller 0dd6089d34
gnu: Add java-svg-salamander. 
* gnu/packages/java.scm (java-svg-salamander): New variable.
* gnu/packages/patches/java-svg-salamander-Fix-non-det.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2019-11-13 22:49:11 +01:00
Julien Lepiller 6dd0e41d43
gnu: Add java-jmapviewer. 
* gnu/packages/geo.scm (java-jmapviewer): New variable.
 2019-11-13 22:49:08 +01:00
Julien Lepiller 68a13319aa
gnu: Add java-openjfx-media. 
* gnu/packages/java.scm (java-openjfx-media): New variable.
 2019-11-13 22:49:05 +01:00
Julien Lepiller 36f73d7058
gnu: Add java-openjfx-graphics. 
* gnu/packages/java.scm (java-openjfx-graphics): New variable.
 2019-11-13 22:49:03 +01:00
Julien Lepiller 46f0543983
gnu: Add java-openjfx-base. 
* gnu/packages/java.scm (java-openjfx-base): New variable.
 2019-11-13 22:49:00 +01:00
Julien Lepiller 7214fbd2f1
gnu: Add java-openjfx-build. 
* gnu/packages/java.scm (java-openjfx-build): New variable.
 2019-11-13 22:48:56 +01:00
Julien Lepiller 16fdf2f55d
gnu: javacc: Install binaries. 
* gnu/packages/java.scm (javacc)[arguments]: Add install-bin phase.
 2019-11-13 22:48:50 +01:00
Julien Lepiller a005c63a21
gnu: Add java-metadata-extractor. 
* gnu/packages/java.scm (java-metadata-extractor): New variable.
 2019-11-13 22:48:45 +01:00
Julien Lepiller 357f456400
gnu: Add java-xmp. 
* gnu/packages/java.scm (java-xmp): New variable.
 2019-11-13 22:48:38 +01:00
Julien Lepiller d45f73c9a1
gnu: Add java-jsonp-impl. 
* gnu/packages/java.scm (java-jsonp-impl): New variable.
 2019-11-13 22:48:33 +01:00
Julien Lepiller da655b1eb2
gnu: Add java-jsonp-api. 
* gnu/packages/java.scm (java-jsonp-api): New variable.
 2019-11-13 22:48:04 +01:00
Julien Lepiller cfdbf2a5c4
gnu: Add java-signpost-core. 
* gnu/packages/web.scm (java-signpost-core): New variable.
 2019-11-13 22:47:54 +01:00
Julien Lepiller 570f3b6370
gnu: antlr3: Fix building after changes in ant-build-system. 
* gnu/packages/java.scm (antlr3, antlr3-3.1, antlr3-3.3): Fix copying
resources causing an error message later in the bootstrap chain.
 2019-11-13 22:47:41 +01:00