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Author SHA1 Message Date
Ricardo Wurmus d72cece70d
gnu: r-rstanarm: Update to 2.21.3. 
* gnu/packages/cran.scm (r-rstanarm): Update to 2.21.3.
 2022-04-12 15:59:57 +02:00
Ricardo Wurmus fb448d177e
gnu: r-rstan: Update to 2.21.5. 
* gnu/packages/cran.scm (r-rstan): Update to 2.21.5.
 2022-04-12 15:59:57 +02:00
Ricardo Wurmus c14f63114c
gnu: r-loo: Update to 2.5.1. 
* gnu/packages/cran.scm (r-loo): Update to 2.5.1.
 2022-04-12 15:59:57 +02:00
Ricardo Wurmus 23aeeca58f
gnu: r-rstantools: Update to 2.2.0. 
* gnu/packages/cran.scm (r-rstantools): Update to 2.2.0.
 2022-04-12 15:59:57 +02:00
Ricardo Wurmus a62c9d21c7
gnu: r-cdm: Update to 7.6-11. 
* gnu/packages/cran.scm (r-cdm): Update to 7.6-11.
 2022-04-12 15:59:57 +02:00
Ricardo Wurmus ca7d935528
gnu: r-bdgraph: Update to 2.65. 
* gnu/packages/cran.scm (r-bdgraph): Update to 2.65.
 2022-04-12 15:59:57 +02:00
Ricardo Wurmus 61f5d714b4
gnu: r-sem: Update to 3.1-15. 
* gnu/packages/cran.scm (r-sem): Update to 3.1-15.
 2022-04-12 15:59:57 +02:00
Ricardo Wurmus 7791d6aa6e
gnu: r-flexclust: Update to 1.4-1. 
* gnu/packages/cran.scm (r-flexclust): Update to 1.4-1.
 2022-04-12 15:59:56 +02:00
Ricardo Wurmus fc244cb509
gnu: r-actuar: Update to 3.2-2. 
* gnu/packages/cran.scm (r-actuar): Update to 3.2-2.
 2022-04-12 15:59:56 +02:00
Ricardo Wurmus 3b566d8994
gnu: r-expint: Update to 0.1-7. 
* gnu/packages/cran.scm (r-expint): Update to 0.1-7.
 2022-04-12 15:59:56 +02:00
Ricardo Wurmus 827c45ced2
gnu: r-genalg: Update to 0.2.1. 
* gnu/packages/cran.scm (r-genalg): Update to 0.2.1.
 2022-04-12 15:59:56 +02:00
Ricardo Wurmus 41c21383e1
gnu: r-tuner: Update to 1.4.0. 
* gnu/packages/cran.scm (r-tuner): Update to 1.4.0.
 2022-04-12 15:59:56 +02:00
Ricardo Wurmus 7eec0fd7b2
gnu: r-lhs: Update to 1.1.5. 
* gnu/packages/cran.scm (r-lhs): Update to 1.1.5.
 2022-04-12 15:59:56 +02:00
Ricardo Wurmus 6c4f030b43
gnu: r-accsda: Update to 1.1.1. 
* gnu/packages/cran.scm (r-accsda): Update to 1.1.1.
[propagated-inputs]: Remove r-rarpack and r-sparselda.
 2022-04-12 15:59:56 +02:00
Ricardo Wurmus 1a91e05174
gnu: r-accept: Update to 0.9.0. 
* gnu/packages/cran.scm (r-accept): Update to 0.9.0.
 2022-04-12 15:59:56 +02:00
Ricardo Wurmus a1dbf372df
gnu: r-pmcmrplus: Update to 1.9.4. 
* gnu/packages/cran.scm (r-pmcmrplus): Update to 1.9.4.
 2022-04-12 15:59:56 +02:00
Ricardo Wurmus 6cf3b286b8
gnu: r-desolve: Update to 1.31. 
* gnu/packages/cran.scm (r-desolve): Update to 1.31.
 2022-04-12 15:59:56 +02:00
Ricardo Wurmus eb9ebff074
gnu: r-rgdal: Update to 1.5-30. 
* gnu/packages/cran.scm (r-rgdal): Update to 1.5-30.
 2022-04-12 15:59:56 +02:00
Ricardo Wurmus d6bdf4fa39
gnu: r-tidygraph: Update to 1.2.1. 
* gnu/packages/cran.scm (r-tidygraph): Update to 1.2.1.
[propagated-inputs]: Remove r-rcpp; add r-cli and r-cpp11.
 2022-04-12 15:59:56 +02:00
Ricardo Wurmus ca856fb082
gnu: r-umap: Update to 0.2.8.0. 
* gnu/packages/cran.scm (r-umap): Update to 0.2.8.0.
[propagated-inputs]: Add r-matrix.
 2022-04-12 15:59:56 +02:00
Ricardo Wurmus ef7ce112e3
gnu: r-mcmcpack: Update to 1.6-2. 
* gnu/packages/cran.scm (r-mcmcpack): Update to 1.6-2.
 2022-04-12 15:59:55 +02:00
Ricardo Wurmus 1db9ca7bbc
gnu: r-float: Update to 0.3-0. 
* gnu/packages/cran.scm (r-float): Update to 0.3-0.
 2022-04-12 15:59:55 +02:00
Ricardo Wurmus e8bc5d3770
gnu: r-ggnewscale: Update to 0.4.7. 
* gnu/packages/cran.scm (r-ggnewscale): Update to 0.4.7.
 2022-04-12 15:59:55 +02:00
Ricardo Wurmus 45b9b2dbce
gnu: r-aplot: Update to 0.1.3. 
* gnu/packages/cran.scm (r-aplot): Update to 0.1.3.
 2022-04-12 15:59:55 +02:00
Ricardo Wurmus eacc2b0ba9
gnu: r-ggfun: Update to 0.0.6. 
* gnu/packages/cran.scm (r-ggfun): Update to 0.0.6.
 2022-04-12 15:59:55 +02:00
Ricardo Wurmus 782ef63cb0
gnu: r-mpm: Update to 1.0-23. 
* gnu/packages/cran.scm (r-mpm): Update to 1.0-23.
 2022-04-12 15:59:55 +02:00
Ricardo Wurmus 4ab5b26870
gnu: r-msigdbr: Update to 7.5.1. 
* gnu/packages/cran.scm (r-msigdbr): Update to 7.5.1.
 2022-04-12 15:59:55 +02:00
Ricardo Wurmus f75e3f40a1
gnu: r-babelgene: Update to 22.3. 
* gnu/packages/cran.scm (r-babelgene): Update to 22.3.
 2022-04-12 15:59:55 +02:00
Ricardo Wurmus b6f56f68a3
gnu: r-kernlab: Update to 0.9-30. 
* gnu/packages/cran.scm (r-kernlab): Update to 0.9-30.
 2022-04-12 15:59:55 +02:00
Ricardo Wurmus e8c463e8a0
gnu: r-bookdown: Update to 0.25. 
* gnu/packages/cran.scm (r-bookdown): Update to 0.25.
 2022-04-12 15:59:55 +02:00
Ricardo Wurmus be84cf818c
gnu: r-spdep: Update to 1.2-3. 
* gnu/packages/cran.scm (r-spdep): Update to 1.2-3.
 2022-04-12 15:59:55 +02:00
Ricardo Wurmus 3074a0ef14
gnu: r-beanplot: Update to 1.3.1. 
* gnu/packages/cran.scm (r-beanplot): Update to 1.3.1.
 2022-04-12 15:59:55 +02:00
Ricardo Wurmus 86d445fc0f
gnu: r-lavaan: Update to 0.6-11. 
* gnu/packages/cran.scm (r-lavaan): Update to 0.6-11.
 2022-04-12 15:59:55 +02:00
Ricardo Wurmus 9480da70d7
gnu: r-ggextra: Update to 0.10.0. 
* gnu/packages/cran.scm (r-ggextra): Update to 0.10.0.
 2022-04-12 15:59:55 +02:00
Ricardo Wurmus 23dbf2c63e
gnu: r-outliers: Update to 0.15. 
* gnu/packages/cran.scm (r-outliers): Update to 0.15.
 2022-04-12 15:59:54 +02:00
Ricardo Wurmus 548acd62ef
gnu: r-parallelly: Update to 1.31.0. 
* gnu/packages/cran.scm (r-parallelly): Update to 1.31.0.
 2022-04-12 15:59:54 +02:00
Ricardo Wurmus ebc5d78996
gnu: r-protviz: Update to 0.7.3. 
* gnu/packages/cran.scm (r-protviz): Update to 0.7.3.
 2022-04-12 15:59:54 +02:00
Ricardo Wurmus 2ed7dabd67
gnu: r-gmp: Update to 0.6-5. 
* gnu/packages/cran.scm (r-gmp): Update to 0.6-5.
 2022-04-12 15:59:54 +02:00
Ricardo Wurmus a72f198bfb
gnu: r-kohonen: Update to 3.0.11. 
* gnu/packages/cran.scm (r-kohonen): Update to 3.0.11.
 2022-04-12 15:59:54 +02:00
Ricardo Wurmus b05c08e901
gnu: r-rncl: Update to 0.8.6. 
* gnu/packages/cran.scm (r-rncl): Update to 0.8.6.
 2022-04-12 15:59:54 +02:00
Ricardo Wurmus 94bfa15ffd
gnu: r-admisc: Update to 0.26. 
* gnu/packages/cran.scm (r-admisc): Update to 0.26.
 2022-04-12 15:59:54 +02:00
Ricardo Wurmus 0a2e4ffccf
gnu: r-afex: Update to 1.1-0. 
* gnu/packages/cran.scm (r-afex): Update to 1.1-0.
 2022-04-12 15:59:54 +02:00
Ricardo Wurmus ec9f2c0dea
gnu: r-pander: Update to 0.6.5. 
* gnu/packages/cran.scm (r-pander): Update to 0.6.5.
 2022-04-12 15:59:54 +02:00
Ricardo Wurmus f4b8fb38f3
gnu: r-rapportools: Update to 1.1. 
* gnu/packages/cran.scm (r-rapportools): Update to 1.1.
[propagated-inputs]: Remove r-reshape; add r-mass and r-reshape2.
 2022-04-12 15:59:54 +02:00
Ricardo Wurmus 92a88b92c0
gnu: r-gert: Update to 1.6.0. 
* gnu/packages/cran.scm (r-gert): Update to 1.6.0.
 2022-04-12 15:59:54 +02:00
Ricardo Wurmus b81477bf58
gnu: r-ggeffects: Update to 1.1.2. 
* gnu/packages/cran.scm (r-ggeffects): Update to 1.1.2.
 2022-04-12 15:59:54 +02:00
Ricardo Wurmus 6f271927f7
gnu: r-performance: Update to 0.9.0. 
* gnu/packages/cran.scm (r-performance): Update to 0.9.0.
 2022-04-12 15:59:54 +02:00
Ricardo Wurmus cfcd32ef18
gnu: r-tmb: Update to 1.8.1. 
* gnu/packages/cran.scm (r-tmb): Update to 1.8.1.
 2022-04-12 15:59:54 +02:00
Ricardo Wurmus 3459a4e9b4
gnu: r-emmeans: Update to 1.7.3. 
* gnu/packages/cran.scm (r-emmeans): Update to 1.7.3.
 2022-04-12 15:59:53 +02:00
Ricardo Wurmus 73cda719ef
gnu: r-acceptancesampling: Update to 1.0-8. 
* gnu/packages/cran.scm (r-acceptancesampling): Update to 1.0-8.
 2022-04-12 15:59:53 +02:00
Ricardo Wurmus e283da0b8e
gnu: r-dofuture: Update to 0.12.1. 
* gnu/packages/cran.scm (r-dofuture): Update to 0.12.1.
 2022-04-12 15:59:53 +02:00
Ricardo Wurmus fd1f62a8a2
gnu: r-infotheo: Update to 1.2.0.1. 
* gnu/packages/cran.scm (r-infotheo): Update to 1.2.0.1.
 2022-04-12 15:59:53 +02:00
Ricardo Wurmus dd8b3daad5
gnu: r-hash: Update to 2.2.6.2. 
* gnu/packages/cran.scm (r-hash): Update to 2.2.6.2.
 2022-04-12 15:59:53 +02:00
Ricardo Wurmus 9613f4d28d
gnu: r-sjlabelled: Update to 1.2.0. 
* gnu/packages/cran.scm (r-sjlabelled): Update to 1.2.0.
[propagated-inputs]: Add r-datawizard.
 2022-04-12 15:59:53 +02:00
Ricardo Wurmus 5db7d12c5b
gnu: r-insight: Update to 0.17.0. 
* gnu/packages/cran.scm (r-insight): Update to 0.17.0.
 2022-04-12 15:59:53 +02:00
Ricardo Wurmus 5bf05abb35
gnu: r-officer: Update to 0.4.2. 
* gnu/packages/cran.scm (r-officer): Update to 0.4.2.
[native-inputs]: Remove r-knitr.
 2022-04-12 15:59:53 +02:00
Ricardo Wurmus 9d7c65735c
gnu: r-rdpack: Update to 2.3. 
* gnu/packages/cran.scm (r-rdpack): Update to 2.3.
 2022-04-12 15:59:53 +02:00
Ricardo Wurmus adfcda5028
gnu: r-rbibutils: Update to 2.2.8. 
* gnu/packages/cran.scm (r-rbibutils): Update to 2.2.8.
 2022-04-12 15:59:53 +02:00
Ricardo Wurmus 209d20cb3f
gnu: r-polynom: Update to 1.4-1. 
* gnu/packages/cran.scm (r-polynom): Update to 1.4-1.
[native-inputs]: Add r-knitr.
 2022-04-12 15:59:53 +02:00
Ricardo Wurmus 8d6e4cfacd
gnu: r-fansi: Update to 1.0.3. 
* gnu/packages/cran.scm (r-fansi): Update to 1.0.3.
 2022-04-12 15:59:53 +02:00
Ricardo Wurmus f42b3ac904
gnu: r-fstcore: Update to 0.9.12. 
* gnu/packages/cran.scm (r-fstcore): Update to 0.9.12.
[inputs]: Add zlib.
[native-inputs]: Add pkg-config.
 2022-04-12 15:59:52 +02:00
Ricardo Wurmus c5979221ff
gnu: r-cubature: Update to 2.0.4.4. 
* gnu/packages/cran.scm (r-cubature): Update to 2.0.4.4.
 2022-04-12 15:59:52 +02:00
Ricardo Wurmus 2321ee0911
gnu: r-tseries: Update to 0.10-50. 
* gnu/packages/cran.scm (r-tseries): Update to 0.10-50.
 2022-04-12 15:59:52 +02:00
Ricardo Wurmus 76322379bf
gnu: r-leaflet: Update to 2.1.1. 
* gnu/packages/cran.scm (r-leaflet): Update to 2.1.1.
 2022-04-12 15:59:52 +02:00
Ricardo Wurmus 4b13e9cedf
gnu: r-tinytex: Update to 0.38. 
* gnu/packages/cran.scm (r-tinytex): Update to 0.38.
 2022-04-12 15:59:52 +02:00
Ricardo Wurmus 87e22a6ee3
gnu: r-uuid: Update to 1.0-4. 
* gnu/packages/cran.scm (r-uuid): Update to 1.0-4.
 2022-04-12 15:59:52 +02:00
Ricardo Wurmus 848a5f084d
gnu: r-vctrs: Update to 0.4.0. 
* gnu/packages/cran.scm (r-vctrs): Update to 0.4.0.
[propagated-inputs]: Remove r-ellipsis; add r-cli.
 2022-04-12 15:59:52 +02:00
Ricardo Wurmus 9b87c4d761
gnu: r-seriation: Update to 1.3.5. 
* gnu/packages/cran.scm (r-seriation): Update to 1.3.5.
 2022-04-12 15:59:52 +02:00
Ricardo Wurmus 1cdff104e0
gnu: r-processx: Update to 3.5.3. 
* gnu/packages/cran.scm (r-processx): Update to 3.5.3.
 2022-04-12 15:59:52 +02:00
Ricardo Wurmus 8cb09ced1a
gnu: r-psych: Update to 2.2.3. 
* gnu/packages/cran.scm (r-psych): Update to 2.2.3.
 2022-04-12 15:59:52 +02:00
Ricardo Wurmus b17977beeb
gnu: r-ddalpha: Update to 1.3.13. 
* gnu/packages/cran.scm (r-ddalpha): Update to 1.3.13.
 2022-04-12 15:59:52 +02:00
Ricardo Wurmus 92d3dfb18f
gnu: r-lmtest: Update to 0.9-40. 
* gnu/packages/cran.scm (r-lmtest): Update to 0.9-40.
 2022-04-12 15:59:52 +02:00
Ricardo Wurmus b3b1d1a48a
gnu: r-restrserve: Update to 1.0.0. 
* gnu/packages/cran.scm (r-restrserve): Update to 1.0.0.
 2022-04-12 15:59:52 +02:00
Ricardo Wurmus 372dec0880
gnu: r-auc: Update to 0.3.2. 
* gnu/packages/cran.scm (r-auc): Update to 0.3.2.
 2022-04-12 15:59:51 +02:00
Ricardo Wurmus 6325f0e27d
gnu: r-rcppthread: Update to 2.1.3. 
* gnu/packages/cran.scm (r-rcppthread): Update to 2.1.3.
 2022-04-12 15:59:51 +02:00
Ricardo Wurmus b5c3a90adb
gnu: r-rcpp: Update to 1.0.8.3. 
* gnu/packages/cran.scm (r-rcpp): Update to 1.0.8.3.
 2022-04-12 15:59:51 +02:00
Ricardo Wurmus d5ee4a0ac4
gnu: r-sass: Update to 0.4.1. 
* gnu/packages/cran.scm (r-sass): Update to 0.4.1.
 2022-04-12 15:59:51 +02:00
Ricardo Wurmus 095e64db88
gnu: r-hwriter: Update to 1.3.2.1. 
* gnu/packages/cran.scm (r-hwriter): Update to 1.3.2.1.
 2022-04-12 15:59:51 +02:00
Ricardo Wurmus 658842b0fd
gnu: r-hmm: Update to 1.0.1. 
* gnu/packages/cran.scm (r-hmm): Update to 1.0.1.
 2022-04-12 15:59:51 +02:00
Ricardo Wurmus c7ade5c6cc
gnu: r-readxl: Update to 1.4.0. 
* gnu/packages/cran.scm (r-readxl): Update to 1.4.0.
[propagated-inputs]: Remove r-rcpp; add r-cpp11.
[native-inputs]: Add r-knitr.
 2022-04-12 15:59:51 +02:00
Ricardo Wurmus 829b934572
gnu: r-mboost: Update to 2.9-6. 
* gnu/packages/cran.scm (r-mboost): Update to 2.9-6.
 2022-04-12 15:59:51 +02:00
Ricardo Wurmus df9bd7785d
gnu: r-ggpmisc: Update to 0.4.6. 
* gnu/packages/cran.scm (r-ggpmisc): Update to 0.4.6.
 2022-04-12 15:59:51 +02:00
Ricardo Wurmus c63d9495ab
gnu: r-ggpp: Update to 0.4.4. 
* gnu/packages/cran.scm (r-ggpp): Update to 0.4.4.
 2022-04-12 15:59:51 +02:00
Ricardo Wurmus bfeafc8b1d
gnu: r-waldo: Update to 0.4.0. 
* gnu/packages/cran.scm (r-waldo): Update to 0.4.0.
 2022-04-12 15:59:51 +02:00
Ricardo Wurmus f233cb384a
gnu: r-datawizard: Update to 0.4.0. 
* gnu/packages/cran.scm (r-datawizard): Update to 0.4.0.
 2022-04-12 15:59:51 +02:00
Ricardo Wurmus 418c6aff40
gnu: r-abn: Update to 2.7-0. 
* gnu/packages/bioconductor.scm (r-abn): Update to 2.7-0.
[propagated-inputs]: Add r-graph.
 2022-04-12 15:59:51 +02:00
Ricardo Wurmus ba5e32d9ce
gnu: r-nmf: Update to 0.24.0. 
* gnu/packages/bioconductor.scm (r-nmf): Update to 0.24.0.
 2022-04-12 15:59:51 +02:00
Guillaume Le Vaillant 59377f88ed
gnu: cl-py4cl: Improve package definition. 
This is a follow-up to 917c25b3ba.

* gnu/packages/lisp-xyz.scm (sbcl-py4cl)[propagated-inputs]: Move python
  to...
  [inputs]: ... here.
  [arguments]: Use 'search-input-file' instead of 'which' in
  'fix-python3-path' phase.
 2022-04-12 15:08:08 +02:00
Paul A. Patience 917c25b3ba
gnu: cl-py4cl: Fix path to python3. 
* gnu/packages/lisp-xyz.scm (sbcl-py4cl)[arguments]: Add the
  'fix-python3-path' phase.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-04-12 13:59:17 +02:00
Paul A. Patience 1f22508a8a
gnu: cl-py4cl: Fix path to py4cl.py. 
* gnu/packages/lisp-xyz.scm (sbcl-py4cl)[arguments]: Fix
  'replace-*base-directory*-var' phase.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-04-12 13:53:34 +02:00
Attila Lendvai d3d2881acf
gnu: trezor-agent: Fix it by deleting the sanity-check phase. 
* gnu/packages/finance.scm (trezor-agent)[arguments]: Delete 'sanity-check'
  phase.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-04-12 13:39:12 +02:00
Vagrant Cascadian ba1ce250c8
gnu: genimage: Update to 15. 
* gnu/packages/genimage.scm (genimage): Update to 15.
  [arguments]: Update 'fix-failing-tests phase to reference new files.
 2022-04-11 14:48:35 -07:00
Vagrant Cascadian 8aae96b44c
gnu: genext2fs: Update to 1.5.0. 
* gnu/packages/linux.scm (genext2fs): Update to 1.5.0.
  [source] Update URL.
  [arguments] Remove 'apply-debian-patches phase.
  [home-page] Update URL.
 2022-04-11 14:48:26 -07:00
zimoun 6413d0898b
gnu: Add r-copykat. 
* gnu/packages/bioinformatics.scm (r-copykat): New variable.
 2022-04-11 16:11:45 +02:00
zimoun b96c0b051d
gnu: Add r-dlm. 
* gnu/packages/cran.scm (r-dlm): New variable.
 2022-04-11 16:11:45 +02:00
zimoun 7cd1dd3e10
gnu: Add r-paralleldist. 
* gnu/packages/cran.scm (r-paralleldist): New variable.
 2022-04-11 16:11:45 +02:00
Ludovic Courtès 88d0b086a9
gnu: openmpi: Remove trailing #t. 
* gnu/packages/mpi.scm (openmpi)[arguments]: Remove trailing #t.
 2022-04-11 15:49:33 +02:00
Ludovic Courtès 46b3b7e5a7
gnu: openmpi: Update to 4.1.3. 
* gnu/packages/mpi.scm (openmpi): Update to 4.1.3.
 2022-04-11 15:49:33 +02:00
Ludovic Courtès b478d55ac4
gnu: openmpi: Remove input labels. 
* gnu/packages/mpi.scm (openmpi)[inputs]: Remove input labels.
 2022-04-11 15:49:33 +02:00
Ludovic Courtès 649556ea09
gnu: hwloc: Remove trailing #t. 
* gnu/packages/mpi.scm (hwloc-1)[arguments]: Remove trailing #t.
(hwloc-2)[arguments]: Likewise.
 2022-04-11 15:49:33 +02:00