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Author SHA1 Message Date
(unmatched-parenthesis 4fb0b075e4
gnu: Add go-github-com-gogs-chardet.
* gnu/packages/golang.scm (go-github-com-gogs-chardet): New variable.

Signed-off-by: Raghav Gururajan <rg@raghavgururajan.name>
2022-11-20 08:54:11 -05:00
(unmatched-parenthesis a2af6352e3
gnu: Add go-github-com-ssor-bom.
* gnu/packages/golang.scm (go-github-com-ssor-bom): New variable.

Signed-off-by: Raghav Gururajan <rg@raghavgururajan.name>
2022-11-20 08:54:11 -05:00
(unmatched-parenthesis 9290e943cf
gnu: Add go-github-com-rivo-tview.
* gnu/packages/golang.scm (go-github-com-rivo-tview): New variable.

Signed-off-by: Raghav Gururajan <rg@raghavgururajan.name>
2022-11-20 08:54:11 -05:00
Guillaume Le Vaillant 52fdcf299d
gnu: cl-virality: Don't install examples.
* gnu/packages/lisp-xyz.scm (sbcl-virality)[arguments]: Add 'delete-examples'
  phase.
2022-11-20 14:45:00 +01:00
Paul A. Patience c8f406056f
gnu: Add cl-simplified-types.
* gnu/packages/lisp-xyz.scm (sbcl-simplified-types, cl-simplified-types,
  ecl-simplified-types): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-11-20 14:45:00 +01:00
Paul A. Patience 46a2e98ca9
gnu: Add cl-pp-toml.
* gnu/packages/lisp-xyz.scm (sbcl-pp-toml, cl-pp-toml, ecl-pp-toml): New
  variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-11-20 14:45:00 +01:00
Sharlatan Hellseher 9c2d6ddfbe
gnu: Add cl-virality.
* gnu/packages/lisp-xyz.scm (cl-virality, sbcl-virality): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-11-20 14:45:00 +01:00
(unmatched-parenthesis ae90aaa60c
gnu: Rename go-golang-org-colorful to go-github-com-lucasb-eyer-go-colorful.
* gnu/packages/golang.scm (go-golang-org-colorful): Deprecate and rename to...
(go-github-com-lucasb-eyer-go-colorful): ...this.
(go-github-com-gdamore-tcell)[inputs]: Rename go-golang-org-colorful to
go-github-com-lucasb-eyer-go-colorful.
(go-github-com-muesli-termenv)[inputs]: Likewise.
(go-github-com-charmbracelet-glamour)[inputs]: Likewise.
(go-github-com-charmbracelet-bubbletea)[inputs]: Likewise.
* gnu/packages/configuration-management.scm (chezmoi)[native-inputs]: Rename
go-golang-org-colorful to go-github-com-lucasb-eyer-go-colorful.
* gnu/packages/image-viewers.scm (pixterm)[inputs]: Likewise.

Signed-off-by: Raghav Gururajan <rg@raghavgururajan.name>
2022-11-20 08:31:05 -05:00
(unmatched-parenthesis 35cbf0c04a
gnu: Add go-github-com-go-ini-ini.
* gnu/packages/golang.scm (go-github-com-go-ini-ini): New variable.

Signed-off-by: Raghav Gururajan <rg@raghavgururajan.name>
2022-11-20 08:31:05 -05:00
( cfec9f0552
gnu: go-github-com-zenhack-go-notmuch: Use ungexp-native.
* gnu/packages/golang.scm (go-github-com-zenhack-go-notmuch)
[arguments]<#:phases>{'unpack-test-fixtures}: Use ungexp-native with
notmuch-fixtures.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2022-11-20 12:00:04 +00:00
Leo Nikkilä d072bcebbf
gnu: Fix copyright line.
This is a follow-up to commit 9ad311ec15.

* gnu/packages/virtualization.scm: Remove copyright line.
* gnu/services/virtualization.scm: Add copyright line.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2022-11-20 12:00:04 +00:00
Christopher Baines dafab37110
services: guix-build-coordinator: Remove duplicate log timestamp.
* gnu/services/guix.scm (guix-build-coordinator-shepherd-services,
guix-build-coordinator-agent-shepherd-services,
guix-build-coordinator-queue-builds-shepherd-services): Set
%current-logfile-date-format to "".

Signed-off-by: Christopher Baines <mail@cbaines.net>
2022-11-20 12:00:04 +00:00
Marius Bakke b8fd2877c9
gnu: python-pbkdf2: Don't use python-pycrypto.
* gnu/packages/python-xyz.scm (python-pbkdf2)[propagated-inputs]: Remove.
2022-11-20 12:17:30 +01:00
Marius Bakke 0985bba557
gnu: python-flask-restful: Remove unused dependency.
* gnu/packages/python-web.scm (python-flask-restful)[propagated-inputs]:
Remove PYTHON-PYCRYPTO.
2022-11-20 12:17:30 +01:00
Marius Bakke 92be7e088d
gnu: ansible-core: Build with python-pycryptodome.
* gnu/packages/admin.scm (ansible-core)[native-inputs]: Replace
PYTHON-PYCRYPTO with PYTHON-PYCRYPTODOME.
2022-11-20 12:17:30 +01:00
Marius Bakke 39d607796b
gnu: python-pycryptodome: Update to 3.15.0.
* gnu/packages/python-crypto.scm (python-pycryptodome): Update to 3.15.0.
(python-pycryptodomex): Update hash.
2022-11-20 12:17:30 +01:00
kiasoc5 4727f45d04
gnu: iwd: Update to 2.0.
* gnu/packages/networking.scm (iwd): Update to 2.0.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-11-20 11:02:03 +02:00
kiasoc5 904decf7c0
gnu: ell: Update to 0.54.
* gnu/packages/linux.scm (ell): Update to 0.54.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-11-20 11:01:51 +02:00
Andy Tai 8db67a3854
gnu: lightning: Update to 2.2.0.
gnu/packages/assembly.scm (lightning): Update to 2.2.0.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-11-20 10:50:22 +02:00
Adam Faiz 923be63b44
gnu: chipmunk: Use gexps.
* gnu/packages/game-development.scm (chipmunk)[arguments]: Use gexps.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-11-20 10:47:29 +02:00
Adam Faiz 3d1a5a3ec7
gnu: chipmunk: Fix build.
* gnu/packages/game-development.scm (chipmunk)[source]: Don't include
the <sys/sysctl.h> header. It has been removed in glibc since 2.32.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-11-20 10:46:30 +02:00
Liliana Marie Prikler d09a4cc7c7
gnu: Remove last reference to fortune-mod.
Since fortune-mod was removed in 6b6b947b61,
it makes no sense to mention it in the description of bsd-games.

* gnu/packages/games.scm (bsd-games): Remove reference to fortune-mod.
2022-11-20 09:22:36 +01:00
(unmatched-parenthesis 8cef05bab6
gnu: Add go-github-com-kyoh86-xdg.
* gnu/packages/golang.scm (go-github-com-kyoh86-xdg): New variable.

Signed-off-by: Raghav Gururajan <rg@raghavgururajan.name>
2022-11-19 23:45:29 -05:00
Philip McGrath ac09fcb955
gnu: racket-vm-cs: Avoid duplicate work.
Only configure with '--enable-racket' for cross-compilation: otherwise,
it effectively overrides '--enable-scheme' and bootstraps Chez Scheme
again. This change saves a couple minutes of build time. See upstream
discussion at <https://github.com/racket/racket/issues/4492>.

* gnu/packages/racket.scm (racket-vm-cs)[native-inputs]: Only supply a
Racket VM when cross-compiling.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2022-11-20 02:22:18 +01:00
Philip McGrath d9f51000ca
gnu: chez-scheme-for-racket: Support riscv64.
Use the new native backend instead of "portable bytecode".

* gnu/packages/chez.scm (target-chez-arch): Support riscv64-linux-gnu.
(%chez-features-table): Likewise.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2022-11-20 02:22:18 +01:00
Philip McGrath fca5e1a507
gnu: racket: Update to 8.7.
Also, update 'chez-scheme-for-racket' to 9.5.9.8.

Note that racket-backport-8.6-cross-install.patch,
racket-backport-8.6-docindex-write.patch, and
racket-backport-8.6-hurd.patch were missing from dist_patch_DATA.

* gnu/packages/patches/racket-backport-8.6-cross-install.patch,
gnu/packages/patches/racket-backport-8.6-docindex-write.patch,
gnu/packages/patches/racket-backport-8.6-hurd.patch,
gnu/packages/patches/racket-backport-8.6-zuo.patch: Remove patches.
* gnu/packages/patches/racket-backport-8.7-pkg-strip.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Update accordingly.
* gnu/packages/racket.scm (%racket-origin)[patches]: Likewise.
(%racket-version): Update to 8.7.
(racket)[inputs]: Add 'scheme-doc' source package from '%racket-origin'.
(racket)[inputs]<compatibility, db, deinprogramm, draw, drracket>
<eopl, errortrace, gui, htdp, mzscheme, parser-tools, pict, plai, plot>
<r6rs, redex, scribble, slideshow, snip, typed-racket, srfi>
<string-constants>: Update checksums.
* gnu/packages/chez.scm (chez-scheme-for-racket): Update to 9.5.9.8.
[arguments]: Enable tests.
[description]: Update.
(chez-scheme-for-racket-bootstrap-bootfiles)[arguments]: Update path to
'rktboot'.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2022-11-20 02:22:18 +01:00
Kaelyn 68925b5ee7
gnu: libreoffice: Build reproducibly.
* gnu/packages/libreoffice.scm (libreoffice)[arguments]: Include ‘.otp’
files in the 'reset-zip-timestamps phase.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2022-11-20 01:00:05 +01:00
Kaelyn 536adbd7cc
gnu: libreoffice: Fix build on i686-linux.
* gnu/packages/libreoffice.scm (libreoffice)[arguments]: Add
"--enable-lto" and "--without-galleries" #:configure-flags.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2022-11-20 01:00:00 +01:00
Leo Famulari bc9234a8f8
gnu: linux-libre 4.9: Update to 4.9.334.
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.334.
(linux-libre-4.9-pristine-source): Update hash.
2022-11-26 14:20:53 -05:00
Leo Famulari 330dca4a35
gnu: linux-libre 4.14: Update to 4.14.300.
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.300.
(linux-libre-4.14-pristine-source): Update hash.
2022-11-26 14:20:52 -05:00
Leo Famulari 4a4e6d932f
gnu: linux-libre 4.19: Update to 4.19.267.
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.267.
(linux-libre-4.19-pristine-source, deblob-scripts-4.19): Update hashes.
2022-11-26 14:20:52 -05:00
Leo Famulari 29fbc55f11
gnu: linux-libre 5.4: Update to 5.4.225.
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.225.
(linux-libre-5.4-pristine-source, deblob-scripst-5.4): Update hashes.
2022-11-26 14:20:52 -05:00
Leo Famulari 319fa83dc9
gnu: linux-libre 5.10: Update to 5.10.156.
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.156.
(linux-libre-5.10-pristine-source): Update hash.
2022-11-26 14:20:52 -05:00
Leo Famulari 241c89dc31
gnu: linux-libre 5.15: Update to 5.15.80.
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.80.
(linux-libre-5.15-pristine-source): Update hash.
2022-11-26 14:20:51 -05:00
Leo Famulari bfb64adb66
gnu: linux-libre: Update to 6.0.10.
* gnu/packages/linux.scm (linux-libre-6.0-version): Update to 6.0.10.
(linux-libre-6.0-pristine-source): Update hash.
2022-11-26 14:20:46 -05:00
Marius Bakke c457c715a8
gnu: cdogs-sdl: Update to 1.4.0.
* gnu/packages/games.scm (cdogs-sdl): Update to 1.4.0.
2022-11-26 15:37:45 +01:00
Marius Bakke ac5b6006cf
gnu: varnish: Update to 7.2.1.
* gnu/packages/web.scm (varnish): Update to 7.2.1.
2022-11-26 15:03:55 +01:00
Liliana Marie Prikler 2404afea8b
gnu: Add cryptominisat.
* gnu/packages/maths.scm (cryptominisat): New variable.

Co-authored-by: Maximilian Heisinger <mail@maxheisinger.at>
2022-11-26 14:03:53 +01:00
Liliana Marie Prikler d3ce4a2619
gnu: Add louvain-community.
* gnu/packages/maths.scm (louvain-community): New variable.
2022-11-26 14:03:53 +01:00
Liliana Marie Prikler 58c24ec748
gnu: Add lingeling.
* gnu/packages/maths.scm (lingeling): New variable.
2022-11-26 14:03:53 +01:00
Liliana Marie Prikler fc061ce297
gnu: Add aiger.
* gnu/packages/maths.scm (aiger): New variable.
2022-11-26 14:03:53 +01:00
Christopher Baines ca98b3ab26
gnu: gst-plugins-bad: Skip elements/camerabin test on some systems.
It seems to frequently fail on i686-linux and aarch64-linux.

* gnu/packages/gstreamer.scm (gst-plugins-bad)[arguments]: Skip the
elements/camerabin test on i686-linux and aarch64-linux.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2022-11-26 13:48:26 +01:00
aecepoglu 5ccb5837cc
gnu: cbqn-bootstrap: Update to 0-2.66584ce.
* gnu/packages/bqn.scm (cbqn-bootstrap): Update to 0-2.66584ce.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2022-11-26 13:39:43 +01:00
aecepoglu e1f8802dc1
gnu: bqn-sources: Update to commit 71ce3614...
* gnu/packages/bqn.scm (bqn-sources): Update to commit
71ce36141aaacfa714edca2e408ca522a3bc5554.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2022-11-26 13:36:46 +01:00
( 6c6cc42f0a
gnu: emacs-rec-mode: Patch executable paths.
* gnu/packages/databases.scm (emacs-rec-mode)[#:phases]: Add
‘patch-program-paths’.
[inputs]: Add recutils.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2022-11-26 13:26:37 +01:00
Liliana Marie Prikler 2f0f12933f
gnu: emacs-rec-mode: Use modern package style
* gnu/packages/databases.scm (emacs-rec-mode)[source]<snippet>: Use
G-Expression.
[arguments]: Convert to list of G-Expressions.
[native-inputs]: Drop gratuitous newline.
2022-11-26 13:21:39 +01:00
Nicolas Goaziou adf3eeceda
gnu: lagrange: Update to 1.14.0.
* gnu/packages/web-browsers.scm (lagrange): Update to 1.14.0.
2022-11-26 12:10:10 +01:00
Zhu Zihao c91712aebc
gnu: Add mogan.
* gnu/packages/text-editors.scm (mogan): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2022-11-26 11:59:28 +01:00
Hilton Chain via Guix-patches via 920e809312
gnu: emacs-straight-el: Update to commit f21103d97d18.
* gnu/packages/emacs-xyz.scm (emacs-straight-el): Update to commit
f21103d97d18.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2022-11-26 11:53:56 +01:00
Hilton Chain via Guix-patches via fdad266577
gnu: emacs-ebuku: Update to commit 0c6cf404a49b.
* gnu/packages/emacs-xyz.scm (emacs-ebuku): Update to commit 0c6cf404a49b.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2022-11-26 11:53:23 +01:00
Nicolas Goaziou d223aff97d
gnu: emacs-detached: Update to 0.10.1.
* gnu/packages/emacs-xyz.scm (emacs-detached): Update to 0.10.1.
2022-11-26 11:15:40 +01:00
Nicolas Goaziou 203fe108b5
gnu: emacs-kind-icon: Update to 0.1.9.
* gnu/packages/emacs-xyz.scm (emacs-kind-icon): Update to 0.1.9.
[description]: Use proper Texinfo marker.  Remove useless "etc.".
2022-11-26 11:15:39 +01:00
Nicolas Goaziou 86e47b5ee9
gnu: emacs-xref: Update to 1.6.0.
* gnu/packages/emacs-xyz.scm (emacs-xref): Update to 1.6.0.
2022-11-26 11:15:39 +01:00
Nicolas Goaziou bd6de843e6
gnu: emacs-paredit: Update to 25.
* gnu/packages/emacs-xyz.scm (emacs-paredit): Update to 25.
[description]: Remove out of place emphasis markers.
2022-11-26 11:15:39 +01:00
Antero Mejr afa5fa8d5b
gnu: Add xkcdpass.
* gnu/packages/password-utils.scm (xkcdpass): New variable.

Signed-off-by: Lars-Dominik Braun <lars@6xq.net>
2022-11-26 09:21:10 +01:00
Danny Milosavljevic 7e0ad0dd0f
gnu: docker: Fix tests.
Fixes <https://issues.guix.gnu.org/59551>.
Reported by Edison Ibáñez <arkhan@riseup.net>

* gnu/packages/linux.scm (xfsprogs-5.9): New variable.
* gnu/packages/docker.scm (docker)[inputs]: Replace xfsprogs by xfsprogs-5.9.
2022-11-25 14:46:15 +01:00
Sharlatan Hellseher 78ee6dcfe1
gnu: Add python-sunpy.
* gnu/packages/astronomy.scm (python-sunpy): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2022-11-25 10:51:52 +00:00
Sharlatan Hellseher a3d85918f9
gnu: Add python-reproject.
* gnu/packages/astronomy.scm (python-reproject): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2022-11-25 10:51:52 +00:00
Sharlatan Hellseher 0575012803
gnu: Add python-hvpy.
* gnu/packages/astronomy.scm (python-hvpy): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2022-11-25 10:51:52 +00:00
Sharlatan Hellseher 0458cbd84c
gnu: Add python-mpl-animators.
* gnu/packages/astronomy.scm (python-mpl-animators): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2022-11-25 10:51:52 +00:00
Sharlatan Hellseher 3271fa1f40
gnu: Add python-drms.
* gnu/packages/astronomy.scm (python-drms): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2022-11-25 10:51:52 +00:00
conses 6827d76d38
gnu: Add portfolio.
* gnu/packages/gnome-xyz.scm (portfolio): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2022-11-25 10:51:52 +00:00
Ahriman 123e6f5f24
gnu: Add raider.
* gnu/packages/gnome.scm (raider): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2022-11-25 10:51:51 +00:00
Navid Afkhami b095dac8e0
gnu: Add r-btools.
* gnu/packages/bioinformatics.scm (r-btools): New variable.
2022-11-25 11:17:56 +01:00
Guillaume Le Vaillant 79e40b6ce8
gnu: bitcoin-core: Update to 23.0.
According to <https://bitcoincore.org/en/lifecycle/#schedule>, versions 0.20
and 0.21 have passed end of life.

* gnu/packages/finance.scm (bitcoin-core): Update to 23.0.
  (bitcoin-core-23.0): New variable.
  (bitcoin-core-0.20, bitcoin-core-0.21): Remove variables.
2022-11-25 10:52:16 +01:00
Paul A. Patience d0b4baf51f
gnu: Add cl-system-load.
* gnu/packages/lisp-xyz.scm (sbcl-system-load, cl-system-load,
  ecl-system-load): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-11-25 10:28:29 +01:00
Paul A. Patience 13eafd6730
gnu: Add cl-file-notify.
* gnu/packages/lisp-xyz.scm (sbcl-file-notify, cl-file-notify,
  ecl-file-notify): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-11-25 10:25:49 +01:00
Paul A. Patience 5c93d51366
gnu: Add cl-marray.
* gnu/packages/lisp-xyz.scm (sbcl-marray, cl-marray): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-11-25 10:23:39 +01:00
Paul A. Patience fe09d32e34
gnu: Add cl-atomichron.
* gnu/packages/lisp-xyz.scm (sbcl-atomichron, cl-atomichron,
  ecl-atomichron): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-11-25 10:15:55 +01:00
Paul A. Patience 63374ef9b9
gnu: Add cl-concurrent-hash-tables.
* gnu/packages/lisp-xyz.scm (sbcl-concurrent-hash-tables,
  cl-concurrent-hash-tables, ecl-concurrent-hash-tables): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-11-25 10:12:05 +01:00
Guillaume Le Vaillant 045b868261
gnu: electrum: Update to 4.3.2.
* gnu/packages/finance.scm (electrum): Update to 4.3.2.
2022-11-25 10:03:39 +01:00
Guillaume Le Vaillant 753a88c980
gnu: electron-cash: Update to 4.2.12.
* gnu/packages/finance.scm (electron-cash): Update to 4.2.12.
2022-11-25 09:58:51 +01:00
Guillaume Le Vaillant 4777c104be
gnu: xmrig: Update to 6.18.1.
* gnu/packages/finance.scm (xmrig): Update to 6.18.1.
2022-11-25 09:54:08 +01:00
Guillaume Le Vaillant 77fe40060d
gnu: p2pool: Update to 2.5.
* gnu/packages/finance.scm (p2pool): Update to 2.5.
2022-11-25 09:51:46 +01:00
Nicolas Goaziou 5eb2995c00
gnu: emacs-popon: Update to 0.12.
* gnu/packages/emacs-xyz.scm (emacs-popon): Update to 0.12.
2022-11-24 23:47:32 +01:00
Nicolas Goaziou 94907932b8
gnu: emacs-flymake-mypy: Update to 0.3.0.
* gnu/packages/emacs-xyz.scm (emacs-flymake-mypy): Update to 0.3.0.
2022-11-24 23:45:05 +01:00
Nicolas Goaziou d858714ffc
gnu: burgerspace: Update to 1.9.5.
* gnu/packages/games.scm (burgerspace): Update to 1.9.5.
2022-11-24 23:36:03 +01:00
Nicolas Goaziou fa5701964d
gnu: emacs-inspector: Activate tests.
* gnu/packages/emacs-xyz.scm (emacs-inspector)[arguments]: Add tests.  Skip
failing test.  Fix compatibility with Emacs 28 and older.
2022-11-24 23:30:57 +01:00
Nicolas Goaziou 84136e95b2
gnu: emacs-inspector: Fix base version.
* gnu/packages/emacs-xyz.scm (emacs-inspector)[version]: Use "0.8" as base
version, which is the version from "inspector.el" instead of
"tree-inspector.el".
2022-11-24 23:30:56 +01:00
Maxim Cournoyer 82c43b276d
gnu: linux-libre: Enable building info doc.
* gnu/packages/patches/linux-libre-infodocs-target.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/linux.scm (linux-libre-6.0-source, linux-libre-5.15-source)
(linux-libre-5.10-source): Apply above patch.
(doc-supported?): New procedure.
(make-linux-libre) [DOC-SUPPORTED?]: Add new patch in
the default patches used.  Add a BUILD-DOC? argument.
(make-linux-libre*): Add a BUILD-DOC? argument.  Validate BUILD-DOC? for
supported VERSION.
[arguments]: Conditionally add the build-doc and install-doc phases.
[native-inputs]: Conditionally add fontconfig, graphviz, python-wrapper,
python-sphinx, texinfo and which.
2022-11-24 16:35:11 -05:00
Ricardo Wurmus 5f8c11d48e
gnu: emacs-s: Do not use full-fledged Emacs to run tests.
* gnu/packages/emacs-xyz.scm (emacs-s)[arguments]: Use emacs-minimal.
2022-11-24 22:32:53 +01:00
Efraim Flashner b3beeaa309
gnu: arm-trusted-firmware: Remove blobs in a snippet.
* gnu/packages/firmware.scm (make-arm-trusted-firmware)[source]: Add
snippet to remove binary blobs.
[arguments]: Remove related phase.
2022-11-24 22:22:39 +02:00
Efraim Flashner 255450bed2
gnu: arm-trusted-firmware: Update to 2.8.
* gnu/packages/firmware.scm (make-arm-trusted-firmware): Update to 2.8.
[arguments]: Remove trailing #t from phases. Clean up regexes.
2022-11-24 22:22:38 +02:00
Efraim Flashner 564dcaa1fa
gnu: python-brotlicffi: Unbundle brotli.
* gnu/packages/python-compression.scm (python-brotlicffi)[source]: Add
snippet to delete bundled libbrotli.
[arguments]: Add phase to configure using shared libbrotli.
[inputs]: Add brotli.
2022-11-24 22:22:32 +02:00
Maxim Cournoyer 4c9e94a453
gnu: Add qt-creator.
* gnu/packages/qt.scm (qt-creator): New variable.

wip
2022-11-24 14:55:57 -05:00
Maxim Cournoyer 085831010c
gnu: qttools: Add clang-15 as input.
* gnu/packages/qt.scm (qttools) [inputs]: Add clang-15, so that the qdoc
command can be built.
[phases] {sanity-check}: New phase, to guard against a problem that proved
difficult to isolate.
2022-11-24 14:55:57 -05:00
Maxim Cournoyer d1dc2c47fe
gnu: Add clazy.
* gnu/packages/qt.scm (clazy): New variable.
2022-11-24 14:55:57 -05:00
Maxim Cournoyer 9381e14536
gnu: Add qttranslations.
* gnu/packages/qt.scm (qttranslations): New variable.
2022-11-24 14:52:56 -05:00
Nicolas Goaziou 8f3e10ae81
gnu: emacs-projectile: Activate tests.
* gnu/packages/emacs-xyz.scm (emacs-projectile)[source]: Use Git repository
instead of released tarball to get the test file.
[arguments]: Activate tests, and fix a failing one.
2022-11-24 18:06:33 +01:00
Nicolas Goaziou b438e1f231
gnu: emacs-projectile: Improve description.
* gnu/packages/emacs-xyz.scm (emacs-projectile)[description]: Use proper
capitalization, expand some words, add Texinfo markup, remove fancy typography.
2022-11-24 18:05:41 +01:00
Nicolas Goaziou 826d862eb3
gnu: emacs-projectile: Update to 2.7.0.
* gnu/packages/emacs-xyz.scm (emacs-projectile): Update to 2.7.0.
2022-11-24 18:05:41 +01:00
Nicolas Goaziou 071d0cac80
gnu: emacs-kind-icon: Update to 0.1.8.
* gnu/packages/emacs-xyz.scm (emacs-kind-icon): Update to 0.1.8.
2022-11-24 18:05:40 +01:00
Nicolas Goaziou 95aa64e9fe
gnu: emacs-vertico: Update to 0.29.
* gnu/packages/emacs-xyz.scm (emacs-vertico): Update to 0.29.
2022-11-24 18:05:40 +01:00
Nicolas Goaziou 49cfa7d8bd
gnu: emacs-eldev: Update to 1.3.
* gnu/packages/emacs-xyz.scm (emacs-eldev): Update to 1.3.
2022-11-24 18:05:40 +01:00
Nicolas Goaziou b8eb99f817
gnu: emacs-detached: Update to 0.10.0.
* gnu/packages/emacs-xyz.scm (emacs-detached): Update to 0.10.0.
2022-11-24 18:05:39 +01:00
Nicolas Goaziou 3174c4c17d
gnu: emacs-org-modern: Update to 0.6.
* gnu/packages/emacs-xyz.scm (emacs-org-modern): Update to 0.6.
2022-11-24 18:05:39 +01:00
Ricardo Wurmus c29d999a34
gnu: r-ancombc: Update to 2.0.1.
* gnu/packages/bioconductor.scm (r-ancombc): Update to 2.0.1.
[propagated-inputs]: Remove r-microbiome, r-nlme, and r-phyloseq; add r-cvxr, r-emmeans,
r-lme4, r-lmertest, r-mia, r-rngtools, r-s4vectors,
r-singlecellexperiment, r-summarizedexperiment, and
r-treesummarizedexperiment.
2022-11-24 18:02:15 +01:00
Ricardo Wurmus 139da51753
gnu: Add r-mia.
* gnu/packages/bioconductor.scm (r-mia): New variable.
2022-11-24 18:02:15 +01:00
Ricardo Wurmus 90d8ac279f
gnu: Add r-treesummarizedexperiment.
* gnu/packages/bioconductor.scm (r-treesummarizedexperiment): New variable.
2022-11-24 18:02:15 +01:00
Ricardo Wurmus efb965a4fa
gnu: Add r-cvxr.
* gnu/packages/cran.scm (r-cvxr): New variable.
2022-11-24 18:02:15 +01:00
Ricardo Wurmus bde758150f
gnu: Add r-ecosolver.
* gnu/packages/cran.scm (r-ecosolver): New variable.
2022-11-24 18:02:15 +01:00
Ricardo Wurmus 697a0f8ca4
gnu: Add r-scs.
* gnu/packages/cran.scm (r-scs): New variable.
2022-11-24 18:02:15 +01:00
Ricardo Wurmus 8b1bee45f7
gnu: Add r-osqp.
* gnu/packages/cran.scm (r-osqp): New variable.
2022-11-24 18:02:15 +01:00
Mădălin Ionel Patrașcu 8d3bd8e4b0
gnu: Add r-ancombc.
* gnu/packages/bioconductor.scm (r-ancombc): New variable.
2022-11-24 18:02:15 +01:00
Leo Famulari a8c36bf8c4
gnu: linux-libre 4.19: Update to 4.19.266.
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.266.
(linux-libre-4.19-pristine-source): Update hash.
2022-11-24 11:25:51 -05:00
Ricardo Wurmus fa59a22140
gnu: r-aims: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-aims): Update to 1.30.0.
2022-11-24 15:36:18 +01:00
Mădălin Ionel Patrașcu 2e85d26ebb
gnu: Add r-aims.
* gnu/packages/bioconductor.scm (r-aims): New variable.
2022-11-24 15:35:38 +01:00
Ricardo Wurmus 6f39e16124
gnu: r-alevinqc: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-alevinqc): Update to 1.14.0.
2022-11-24 15:28:15 +01:00
Mădălin Ionel Patrașcu 5dc82a7f8b
gnu: Add r-alevinqc.
* gnu/packages/bioconductor.scm (r-alevinqc): New variable.
2022-11-24 15:22:28 +01:00
Ricardo Wurmus 610616d448
gnu: r-alphabeta: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-alphabeta): Update to 1.12.0.
2022-11-24 15:13:50 +01:00
Mădălin Ionel Patrașcu 6c7f0849c1
gnu: Add r-alphabeta.
* gnu/packages/bioconductor.scm (r-alphabeta): New variable.
2022-11-24 15:09:13 +01:00
Ricardo Wurmus c706a0a2af
gnu: r-asafe: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-asafe): Update to 1.24.0.
2022-11-24 15:02:41 +01:00
Mădălin Ionel Patrașcu 01124e5a10
gnu: Add r-asafe.
* gnu/packages/bioconductor.scm (r-asafe): New variable.
2022-11-24 15:02:10 +01:00
Ricardo Wurmus c2cba91ac9
gnu: r-arrayexpress: Update to 1.57.0.
* gnu/packages/bioconductor.scm (r-arrayexpress): Update to 1.57.0.
2022-11-24 14:54:41 +01:00
Mădălin Ionel Patrașcu 13e8930efb
gnu: Add r-arrayexpress.
* gnu/packages/bioconductor.scm (r-arrayexpress): New variable.
2022-11-24 14:53:09 +01:00
Ricardo Wurmus f43a41d196
gnu: r-scuttle: Update to 1.8.1.
* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.8.1.
2022-11-24 12:32:11 +01:00
Ricardo Wurmus a2ad5b53bf
gnu: r-rgreat: Update to 2.0.2.
* gnu/packages/bioconductor.scm (r-rgreat): Update to 2.0.2.
2022-11-24 12:32:11 +01:00
Ricardo Wurmus 8bfac375aa
gnu: r-bioccheck: Update to 1.34.2.
* gnu/packages/bioconductor.scm (r-bioccheck): Update to 1.34.2.
2022-11-24 12:32:11 +01:00
Ricardo Wurmus f9747ecc2c
gnu: r-dose: Update to 3.24.2.
* gnu/packages/bioconductor.scm (r-dose): Update to 3.24.2.
2022-11-24 12:32:10 +01:00
Ricardo Wurmus a5ee462b7a
gnu: r-shortread: Update to 1.56.1.
* gnu/packages/bioconductor.scm (r-shortread): Update to 1.56.1.
2022-11-24 12:32:10 +01:00
Ricardo Wurmus 3bc54ddeab
gnu: r-chipseeker: Update to 1.34.1.
* gnu/packages/bioconductor.scm (r-chipseeker): Update to 1.34.1.
2022-11-24 12:32:10 +01:00
Ricardo Wurmus d3696e71a9
gnu: r-deconvr: Update to 1.4.2.
* gnu/packages/bioconductor.scm (r-deconvr): Update to 1.4.2.
2022-11-24 12:32:10 +01:00
Ricardo Wurmus 04340b27ba
gnu: r-bambu: Update to 3.0.2.
* gnu/packages/bioconductor.scm (r-bambu): Update to 3.0.2.
2022-11-24 12:32:10 +01:00
Ricardo Wurmus 4c0449ba8f
gnu: r-minimal: Simplify build phase.
* gnu/packages/statistics.scm (r-minimal)[arguments]: Simplify phase
"remove-extraneous-references".
2022-11-24 12:32:10 +01:00
Ricardo Wurmus a8082fefe0
gnu: r-minimal: Use %store-directory instead of /gnu/store.
* gnu/packages/statistics.scm (r-minimal)[arguments]: Use %store-directory
instead of hard-coding "/gnu/store" prefix.
2022-11-24 12:32:10 +01:00
Ricardo Wurmus eeeca2341d
gnu: r-with-tests: Update to 4.2.2.
* gnu/packages/statistics.scm (r-with-tests): Update to 4.2.2.
[arguments]: Patch DESCRIPTION file of "tools" package to avoid
non-deterministic line break.
2022-11-24 12:32:09 +01:00
Ricardo Wurmus ffe149ccc5
gnu: r-with-tests: Drop labels from input lists.
* gnu/packages/statistics.scm (r-with-tests)[native-inputs]: Drop input
labels.
[inputs]: Same.
(r-minimal)[arguments]: Remove lookup of "texlive" package.
2022-11-24 12:32:09 +01:00
Ricardo Wurmus f3004710fa
gnu: r-ggtern: Update to 3.4.0.
* gnu/packages/cran.scm (r-ggtern): Update to 3.4.0.
2022-11-24 12:32:09 +01:00
zimoun 54afdb3de1
gnu: r-phyloseq: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-phyloseq): Update to 1.42.0.
2022-11-24 12:32:09 +01:00
zimoun 9988c60ea3
gnu: r-tximeta: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.16.0.
2022-11-24 12:32:09 +01:00
zimoun 5140be4c81
gnu: r-tricycle: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-tricycle): Update to 1.6.0.
2022-11-24 12:32:09 +01:00
zimoun 7a33311bfd
gnu: r-tcgabiolinks: Update to 2.25.3.
* gnu/packages/bioconductor.scm (r-tcgabiolinks): Update to 2.25.3.
2022-11-24 12:32:09 +01:00
zimoun dde0da5a95
gnu: r-biscuiteer: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-biscuiteer): Update to 1.12.0.
2022-11-24 12:32:09 +01:00
zimoun 926fe78f73
gnu: r-omnipathr: Update to 3.5.25.
* gnu/packages/bioconductor.scm (r-omnipathr): Update to 3.5.25.
[propagated-inputs]: Add r-rmarkdown and r-rvest.
2022-11-24 12:32:08 +01:00
zimoun 3f58454739
gnu: r-omicade4: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-omicade4): Update to 1.38.0.
2022-11-24 12:32:08 +01:00
zimoun e524c12e06
gnu: r-dmrseq: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-dmrseq): Update to 1.18.0.
2022-11-24 12:32:08 +01:00
zimoun 95792cda89
gnu: r-dada2: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-dada2): Update to 1.26.0.
2022-11-24 12:32:08 +01:00
zimoun c2c91d9dfe
gnu: r-bsseq: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-bsseq): Update to 1.34.0.
2022-11-24 12:32:08 +01:00
zimoun 3b8df103f7
gnu: r-biotmle: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-biotmle): Update to 1.22.0.
2022-11-24 12:32:08 +01:00
zimoun 3ed0a63106
gnu: r-biotip: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-biotip): Update to 1.12.0.
2022-11-24 12:32:08 +01:00
zimoun f230df5f4f
gnu: r-bioqc: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-bioqc): Update to 1.26.0.
2022-11-24 12:32:07 +01:00
zimoun 219b98fee9
gnu: r-bionetstat: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-bionetstat): Update to 1.18.0.
2022-11-24 12:32:07 +01:00
zimoun 01fb7c35e7
gnu: r-bionet: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-bionet): Update to 1.58.0.
2022-11-24 12:32:07 +01:00
zimoun 1118d6e856
gnu: r-bionero: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-bionero): Update to 1.6.0.
2022-11-24 12:32:07 +01:00
zimoun 858d9ccd9b
gnu: r-biomvrcns: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-biomvrcns): Update to 1.38.0.
2022-11-24 12:32:07 +01:00
zimoun c0412736d8
gnu: r-biomvcclass: Update to 1.66.0.
* gnu/packages/bioconductor.scm (r-biomvcclass): Update to 1.66.0.
2022-11-24 12:32:07 +01:00
zimoun 3879ddbdb9
gnu: r-mvcclass: Update to 1.72.0.
* gnu/packages/bioconductor.scm (r-mvcclass): Update to 1.72.0.
2022-11-24 12:32:07 +01:00
zimoun 4875f37cb6
gnu: r-biomformat: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-biomformat): Update to 1.26.0.
2022-11-24 12:32:06 +01:00
zimoun ffd5e53e87
gnu: r-biodb: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-biodb): Update to 1.6.0.
2022-11-24 12:32:06 +01:00
zimoun efc663040b
gnu: r-biocdockermanager: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-biocdockermanager): Update to 1.10.0.
2022-11-24 12:32:06 +01:00
zimoun 4fcf1f08ec
gnu: r-biocthis: Update to 1.8.1.
* gnu/packages/bioconductor.scm (r-biocthis): Update to 1.8.1.
2022-11-24 12:32:06 +01:00
zimoun 3aea2c40d8
gnu: r-basilisk: Update to 1.10.2.
* gnu/packages/bioconductor.scm (r-basilisk): Update to 1.10.2.
2022-11-24 12:32:06 +01:00
zimoun f5a514b605
gnu: r-basilisk-utils: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-basilisk-utils): Update to 1.10.0.
2022-11-24 12:32:06 +01:00
zimoun 925642f837
gnu: r-dir-expiry: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-dir-expiry): Update to 1.6.0.
2022-11-24 12:32:06 +01:00
zimoun 727cd07d1a
gnu: r-genetclassifier: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-genetclassifier): Update to 1.38.0.
2022-11-24 12:32:05 +01:00
zimoun dbaad2365a
gnu: r-minet: Update to 3.56.0.
* gnu/packages/bioconductor.scm (r-minet): Update to 3.56.0.
2022-11-24 12:32:05 +01:00
zimoun 8ba466faff
gnu: r-biobtreer: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-biobtreer): Update to 1.10.0.
2022-11-24 12:32:05 +01:00
zimoun 009ac4e3a9
gnu: r-bgeedb: Update to 2.24.0.
* gnu/packages/bioconductor.scm (r-bgeedb): Update to 2.24.0.
2022-11-24 12:32:05 +01:00
zimoun 3912f43996
gnu: r-bgeecall: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-bgeecall): Update to 1.14.0.
2022-11-24 12:32:05 +01:00
zimoun 81cea8424d
gnu: r-beclear: Update to 2.14.0.
* gnu/packages/bioconductor.scm (r-beclear): Update to 2.14.0.
[propagated-inputs]: Add r-ids.
2022-11-24 12:32:05 +01:00
zimoun 5604f64c34
gnu: r-megadepth: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-megadepth): Update to 1.8.0.
2022-11-24 12:32:05 +01:00
zimoun 3823aa40a3
gnu: r-ballgown: Update to 2.30.0.
* gnu/packages/bioconductor.scm (r-ballgown): Update to 2.30.0.
2022-11-24 12:32:04 +01:00
zimoun 3ca58a4ff3
gnu: r-guitar: Update to 2.14.0.
* gnu/packages/bioconductor.scm (r-guitar): Update to 2.14.0.
2022-11-24 12:32:04 +01:00
zimoun 5950a171ba
gnu: r-chromstar: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-chromstar): Update to 1.24.0.
2022-11-24 12:32:04 +01:00
zimoun 1ff0bc4e7b
gnu: r-snpstats: Update to 1.48.0.
* gnu/packages/bioconductor.scm (r-snpstats): Update to 1.48.0.
2022-11-24 12:32:04 +01:00
zimoun ddc7edf0b3
gnu: r-pathview: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-pathview): Update to 1.38.0.
2022-11-24 12:32:04 +01:00
zimoun 1315c532de
gnu: r-ldblock: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-ldblock): Update to 1.28.0.
2022-11-24 12:32:04 +01:00
zimoun db290bf5b9
gnu: r-kegggraph: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-kegggraph): Update to 1.58.0.
2022-11-24 12:32:04 +01:00
zimoun b6e56ceeb9
gnu: r-gwascat: Update to 2.30.0.
* gnu/packages/bioconductor.scm (r-gwascat): Update to 2.30.0.
2022-11-24 12:32:03 +01:00
zimoun 5f3ff4f884
gnu: r-gviz: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.42.0.
2022-11-24 12:32:03 +01:00
zimoun 34867ac9cf
gnu: r-ggbio: Update to 1.46.0.
* gnu/packages/bioconductor.scm (r-ggbio): Update to 1.46.0.
2022-11-24 12:32:03 +01:00
zimoun 77f2aa3fa4
gnu: r-erma: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-erma): Update to 1.14.0.
2022-11-24 12:32:03 +01:00
zimoun dbeb05e6a3
gnu: r-catalyst: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-catalyst): Update to 1.22.0.
2022-11-24 12:32:03 +01:00
zimoun 01e78296bc
gnu: r-msmstests: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-msmstests): Update to 1.36.0.
2022-11-24 12:32:03 +01:00
zimoun 5c6c7831d6
gnu: r-msmseda: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-msmseda): Update to 1.36.0.
2022-11-24 12:32:03 +01:00
zimoun 94a86e7e39
gnu: r-biocio: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-biocio): Update to 1.8.0.
2022-11-24 12:32:02 +01:00
zimoun 0640f750b4
gnu: r-msfeatures: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-msfeatures): Update to 1.6.0.
2022-11-24 12:32:02 +01:00
zimoun b5a0d81448
gnu: r-mscoreutils: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-mscoreutils): Update to 1.10.0.
2022-11-24 12:32:02 +01:00
zimoun 377a9b2177
gnu: r-delayedmatrixstats: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.20.0.
2022-11-24 12:32:02 +01:00
zimoun 2dc26068eb
gnu: r-sparsematrixstats: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-sparsematrixstats): Update to 1.10.0.
2022-11-24 12:32:02 +01:00
zimoun c73d3e9bad
gnu: r-scran: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-scran): Update to 1.26.0.
2022-11-24 12:32:02 +01:00
zimoun 14e3905c6e
gnu: r-scater: Update to 1.26.1.
* gnu/packages/bioconductor.scm (r-scater): Update to 1.26.1.
[propagated-inputs]: Add r-ggrastr, r-pheatmap, and r-uwot.
2022-11-24 12:32:02 +01:00
zimoun 3fa18b5504
gnu: r-scuttle: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.8.0.
2022-11-24 12:32:01 +01:00
zimoun 54a67ddf86
gnu: r-singler: Update to 2.0.0.
* gnu/packages/bioconductor.scm (r-singler): Update to 2.0.0.
2022-11-24 12:32:01 +01:00
zimoun d748ae3d00
gnu: r-singlecellexperiment: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-singlecellexperiment): Update to 1.20.0.
2022-11-24 12:32:01 +01:00
zimoun 64ccd0ff3c
gnu: r-chromvar: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-chromvar): Update to 1.20.0.
2022-11-24 12:32:01 +01:00
zimoun 5374b55b68
gnu: r-motifmatchr: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-motifmatchr): Update to 1.20.0.
2022-11-24 12:32:01 +01:00
zimoun 8b332d676d
gnu: r-maftools: Update to 2.14.0.
* gnu/packages/bioconductor.scm (r-maftools): Update to 2.14.0.
2022-11-24 12:32:01 +01:00
zimoun 21b32e45bd
gnu: r-tfbstools: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-tfbstools): Update to 1.36.0.
2022-11-24 12:32:00 +01:00
zimoun 6dc8ec0358
gnu: r-cner: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-cner): Update to 1.34.0.
2022-11-24 12:32:00 +01:00
zimoun 6dfa3f50b9
gnu: r-beachmat: Update to 2.14.0.
* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.14.0.
2022-11-24 12:32:00 +01:00
zimoun 2a5fb31db9
gnu: r-rhdf5lib: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-rhdf5lib): Update to 1.20.0.
2022-11-24 12:32:00 +01:00
zimoun 9e45f2c183
gnu: r-hdf5array: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.26.0.
2022-11-24 12:32:00 +01:00
zimoun ab92277de4
gnu: r-hitc: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-hitc): Update to 1.42.0.
2022-11-24 12:32:00 +01:00
zimoun 06c18fde52
gnu: r-fithic: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-fithic): Update to 1.24.0.
2022-11-24 12:31:59 +01:00
zimoun 65866be416
gnu: r-fishpond: Update to 2.4.0.
* gnu/packages/bioconductor.scm (r-fishpond): Update to 2.4.0.
2022-11-24 12:31:59 +01:00
zimoun f074346f2c
gnu: r-rgraphviz: Update to 2.42.0.
* gnu/packages/bioconductor.scm (r-rgraphviz): Update to 2.42.0.
2022-11-24 12:31:59 +01:00
zimoun 96cd3b4bcf
gnu: r-s4vectors: Update to 0.36.0.
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.36.0.
2022-11-24 12:31:59 +01:00
zimoun 4737a25691
gnu: r-preprocesscore: Update to 1.60.0.
* gnu/packages/bioconductor.scm (r-preprocesscore): Update to 1.60.0.
2022-11-24 12:31:59 +01:00
zimoun a02007bd88
gnu: r-icens: Update to 1.70.0.
* gnu/packages/bioconductor.scm (r-icens): Update to 1.70.0.
2022-11-24 12:31:59 +01:00