3843820d5d
gnu: emacs-eldev: Update to 1.10.
...
* gnu/packages/emacs-xyz.scm (emacs-eldev): Update to 1.10.
Change-Id: Iafaf10e545920b424fc709def4ebfc6c831cf76f
Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-05-12 18:51:15 +01:00
8643bb4a82
gnu: nano: Update to 8.0.
...
* gnu/packages/text-editors.scm (nano): Update to 8.0.
Change-Id: I2312dd5140fee4d8cc42f622f733c616d7b39550
Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-05-12 18:50:57 +01:00
069e4d86b8
gnu: emacs-suneater-theme: Update to 2.5.2.
...
* gnu/packages/emacs-xyz.scm (emacs-suneater-theme): Update to 2.5.2.
Change-Id: I09ddb510e59d461b7f383a400ef8b7cfbeb19714
Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-05-12 18:47:08 +01:00
d2b9736c5e
gnu: guile-tap: Update to 0.5.1.
...
* gnu/packages/guile-xyz.scm (guile-tap): Update to 0.5.1.
[arguments]: Patch bin/tap-harness.
Change-Id: Ia8a02400f1d559fcec7eb9861f24a7116928814b
Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-05-12 18:43:18 +01:00
ca571f4259
gnu: Add python-vdf.
...
* gnu/packages/python-xyz.scm (python-vdf): New variable.
Reviewed-by: Steve George <steve@futurile.net>
Signed-off-by: Christopher Baines <mail@cbaines.net>
Change-Id: Ie8a14292b9c9937d22f011ac078562e81abd6b36
2024-05-12 18:40:33 +01:00
0dac1307cc
gnu: tmux: Update to 3.4.
...
* gnu/packages/tmux.scm (tmux): Update to 3.4.
[native-inputs]: Add bison.
Reviewed-by: Dale Mellor <guix-devel-0brg6a@rdmp.org>
Signed-off-by: Christopher Baines <mail@cbaines.net>
Change-Id: I549010a3cf492ffe9cdc9df25b2b4a93c60c6ae1
2024-05-12 18:31:25 +01:00
0eaae8e4d4
gnu: Add m8c.
...
* gnu/packages/electronics.scm (m8c): New variable.
Change-Id: Ibfc2e9364211e24c59d4d9015ab144f0c4ee972c
Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-05-12 18:29:30 +01:00
56980ea500
gnu: python-xcffib: Update to 1.4.0.
...
* gnu/packages/python-xyz.scm (python-xcffib): Update to 1.4.0.
[arguments]: Remove obsolete 'install-doc phase. Remove trailing #t
from phases.
Change-Id: I1b68ddffb2620938042384b9b9a0d444ad05bb0a
2024-05-12 10:53:35 +03:00
60e9765729
gnu: gnome-js-common: Fix build on powerpc64le-linux.
...
* gnu/packages/gnome.scm (gnome-js-common)[arguments]: Replace the
config.guess and config.sub files when building for powerpc64le-linux.
[native-inputs]: Add config when building for powerpc64le-linux.
Change-Id: If0cf8fff36347f6bd52b8cf1f43a11fc7f5323b7
2024-05-12 10:00:00 +03:00
43370c2db3
gnu: strongswan: Skip rsa test on i686-linux.
...
* gnu/packages/vpn.scm (strongswan)[arguments]: Adjust custom
'set-up-test-environment phase to skip the rsa tests on i686-linux.
Change-Id: If4aff3f710f2eb4e0dfbad58deb41838421db89f
2024-05-12 10:00:00 +03:00
39059b9390
gnu: minimap2: Remove included file from gcc.
...
* gnu/packages/bioinformatics.scm (minimap2)[arguments]: Adjust custom
'install phase to remove included emmintrin.h header.
Change-Id: Id994dd2bd4a98e8d1c162c4e011fc77b9d5565d2
2024-05-12 09:59:55 +03:00
2793a79117
gnu: python-scikit-image: Update to 0.23.2.
...
* gnu/packages/python-science.scm (python-scikit-image): Update to 0.23.2.
Change-Id: Ief01a2aef5202dd859f9337a45105088d605509e
2024-05-11 18:44:47 -03:00
4a49457995
gnu: meep: Update to 1.28.0.
...
* gnu/packages/engineering.scm (meep): Update to 1.28.0.
[arguments]: Use G-Expressions.
[native-inputs, inputs]: Use package labels.
Change-Id: I98c867645bb7e052a4b909753bc150c4c25d1638
2024-05-11 18:11:04 -03:00
86c896c12e
gnu: python-kombu: Update to 5.3.7.
...
* gnu/packages/python-xyz.scm (python-kombu): Update to 5.3.7.
Change-Id: I6bfb3e4bb508d5003f5db45d1d8d35bd6b15064f
2024-05-11 16:13:52 -03:00
38d3e90abe
gnu: python-osmnx: Update to 1.9.3.
...
* gnu/packages/geo.scm (python-osmnx): Update to 1.9.3.
Change-Id: I43cfa856ff146b1d699cb3ec6490515ac95a27d5
2024-05-11 16:13:52 -03:00
27664208e3
gnu: python-folium: Update to 0.16.0.
...
* gnu/packages/python-xyz.scm (python-folium): Update to 0.16.0.
[build-system]: Use pyproject-build-system.
[arguments]<#:test-flags>: Skip failing tests.
<#:phases>: Add phase 'pretend-version.
[propagated-inputs]: Add python-xyzservices.
[native-inputs]: Add python-geopandas, python-nbconvert, python-pandas,
python-pillow, python-selenium, python-setuptools-scm.
Change-Id: I93db72f62306c8db2a069733b49ac0933c8888ce
2024-05-11 16:13:52 -03:00
a0339072b6
gnu: python-branca: Update to 0.7.2.
...
* gnu/packages/python-web.scm (python-branca): Update to 0.7.2.
[source]: Fetch from GitHub.
[build-system]: Use pyproject-build-system.
[arguments]<#:test-flags>: Ignore a file and skip one test.
<#:phases>: Add phase 'pretend-version.
[propagated-inputs]: Remove python-six.
[native-inputs]: Add python-numpy, python-setuptools-scm.
[description]: Improve it.
Change-Id: I0263797b69fc437b2a268b5d03c211d76e2963c3
2024-05-11 16:13:45 -03:00
6f595eca59
gnu: Add python-botorch.
...
* gnu/packages/machine-learning.scm (python-botorch): New variable.
Change-Id: Iaa67584a3b72ff07bc8bbb92cfa60fde1d9d7647
2024-05-11 15:35:36 -03:00
43e790f4c9
gnu: kdenlive: Update to 24.02.2.
...
* gnu/packages/kde.scm (kdenlive): Update to 24.02.2.
Change-Id: Ib7c50ca2413add01807e792da967108f66fed852
2024-05-11 14:24:49 -03:00
0680eadf3b
gnu: mlt: Update to 7.24.0.
...
* gnu/packages/video.scm (mlt): Update to 7.24.0.
Change-Id: If04fd8aa6db07caa3f5b2a72102b6b93c929b766
2024-05-11 14:24:49 -03:00
30fe006a0b
gnu: python-scikit-rf: Update to 1.0.0.
...
* gnu/packages/engineering.scm (python-scikit-rf): Update to 1.0.0.
Change-Id: I95a3433a365b89ec0f3b641415368823d238244b
2024-05-11 14:24:49 -03:00
6fa742ab31
gnu: python-hy: Update to 0.28.0.
...
* gnu/packages/python-xyz.scm (python-hy): Update to 0.28.0.
[native-inputs]: Replace python-pytest with python-pytest-next.
Change-Id: I6f465a9c834aea51fd0363ba27f9b0ff7b98e82b
2024-05-11 14:24:49 -03:00
6b60d54bbc
gnu: gplates: Update to 2.5.
...
* gnu/packages/geo.scm (gplates): Update to 2.5.
Change-Id: I715a599755b3a7b9ac83ea2ce679a3d79e9409f4
2024-05-11 14:24:49 -03:00
07e59e8c7b
gnu: weechat: Update to 4.2.2.
...
* gnu/packages/irc.scm (weechat): Update to 4.2.2.
Change-Id: I600369749f6a59ae83b312192589bbfdae61e0fe
2024-05-11 14:24:49 -03:00
1568af95bd
gnu: toxic: Update to 0.15.1.
...
* gnu/packages/messaging.scm (toxic): Update to 0.15.1.
[arguments]: Use G-Expressions.
<#:make-flags>: Use gexp variables and cc-for-target.
<#:phases>: Remove trailing #t.
Change-Id: If1d46888e26b16ffcbbca48dc2c88b921e30c433
2024-05-11 14:04:42 -03:00
68c34a7192
gnu: c-toxcore: Update to 0.2.19.
...
* gnu/packages/messaging.scm (c-toxcore): Update to 0.2.19.
[source]: Fetch sources recursively.
[arguments]<#:configure-flags>: Pass "-DENABLE_STATIC=false".
Change-Id: I42fc47b45e1afdbb2c60c80bc56e1b839923ec34
2024-05-11 14:04:42 -03:00
88c170a916
gnu: Add python-libensemble.
...
* gnu/packages/maths.scm (python-libensemble): New variable.
Change-Id: I45d4ba209af746f22f3f6c74a01063726478de0f
2024-05-11 14:04:33 -03:00
4eb1a5426b
gnu: python-metpy: Update to 1.6.2.
...
* gnu/packages/geo.scm (python-metpy): Update to 1.6.2.
Change-Id: I6f05105d969d50acf005ac9035eb8055b9ed53bf
2024-05-11 13:43:09 -03:00
b23183c315
gnu: Add guile-avatar.
...
* gnu/packages/guile-xyz.scm (guile-avatar): New variable.
Change-Id: Ib255842ff8b59b7743c8d7be728a7ca7370024fe
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2024-05-11 17:10:53 +01:00
dd007ed55e
gnu: mumi: Update to 0.1.0.
...
* gnu/packages/mail.scm (mumi): Update to 0.1.0.
[inputs]: Add xdg-utils.
Change-Id: If1444b6abb72f7f039d0417b7d7b38b8221bc9ba
2024-05-11 16:55:04 +01:00
703ae431f4
gnu: guile-xapian: Update to 0.4.0.
...
* gnu/packages/guile-xyz.scm (guile-xapian): Update to 0.4.0.
[source]: Switch to url-fetch.
[native-inputs]: Remove autoconf, autoconf-archive, automake and libtool.
[home-page]: Update home page.
Change-Id: I1e8a1e0126ec2edf94060ba2545be987e380e137
2024-05-10 15:47:40 +01:00
dfe188662b
gnu: qbittorrent-enhanced: Update to 4.6.4.10.
...
* gnu/packages/bittorrent.scm (qbittorrent-enhanced): Update to 4.6.4.10.
Change-Id: I85f1dfaa8cd7eda752778c0d67e311d3ba26a21d
2024-05-10 19:41:33 +08:00
b433ac8d64
gnu: qbittorrent: Update to 4.6.4.
...
* gnu/packages/bittorrent.scm (qbittorrent): Update to 4.6.4.
Change-Id: Iad1fdc9100c4b01e4cab04d101d068e91c5591c4
Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
2024-05-10 19:25:14 +08:00
d59f8f3382
gnu: nghttp3: Update to 1.3.0.
...
* gnu/packages/web.scm (nghttp3): Update to 1.3.0.
Change-Id: I11885d581e61315f68da7570af11ccd992ced51c
Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
2024-05-10 19:22:08 +08:00
790a53b1e6
gnu: ngtcp2: Update to 1.5.0.
...
* gnu/packages/networking.scm (ngtcp2): Update to 1.5.0.
Change-Id: Id119a18ab58517d717b9333385d7946564fcf25a
Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
2024-05-10 19:18:47 +08:00
360fea15cb
gnu: Add sbcl-stumpwm-binwarp.
...
* gnu/packages/wm.scm (sbcl-stumpwm-binwarp): New variable.
Change-Id: Iddf89b0ed79bcf88b35356197ab283916c87f958
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2024-05-09 18:13:24 +02:00
cf5f7a8bf9
gnu: audacity: update to 3.5.1.
...
* gnu/packages/audio.scm (audacity): Update to 3.5.1.
[inputs]: Add opusfile and rapidjson.
* gnu/packages/patches/audacity-ffmpeg-fallback.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Unregister it.
Change-Id: I4245ba1fa21bb54c6b647b001ae9b5cea846c774
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2024-05-09 06:47:09 +02:00
73818c254b
gnu: Add emacs-ellama.
...
* gnu/packages/emacs-xyz.scm (emacs-ellama): New variable.
Change-Id: I47bf40971adca845aa132d08f59cd083154bec0e
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2024-05-09 06:43:35 +02:00
1b6f231c51
gnu: Add emacs-llm.
...
* gnu/packages/emacs-xyz.scm (emacs-llm): New variable.
Change-Id: Ie89eac7a4f0a31245b6d826ae9885a7092528ced
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2024-05-09 06:43:34 +02:00
dc03e6ce50
gnu: python-click-default-group: Enable tests.
...
* gnu/packages/python-xyz.scm (python-click-default-group) [source]:
Swap to git checkout containing tests.
Change-Id: I51d039ce03d4d772ed6246233e5cc830b5548c3a
2024-05-08 22:30:41 +01:00
09c4818beb
gnu: python-qstylizer: Update to 0.2.3.
...
* gnu/packages/python-xyz.scm (python-qstylizer): Update to 0.2.3.
[arguments]: Refresh style.
[propagated-inputs]: Remove python-tinycss; add python-tinycss2.
[native-inputs]: Remove python-pytest-cov, python-pytest-runner, and
python-pytest-xdist.
Change-Id: I99bde105d125053e1316372dfbebf90d4236fcc7
2024-05-08 22:01:47 +01:00
0d7ec97da0
gnu: python-argparse-manpage: Update to 4.5.
...
* gnu/packages/python-xyz.scm (python-argparse-manpage): Update to 4.5.
[build-system]: Switch to pyproject-build-system.
[native-inputs]: Add python-pytest and python-tomli.
Change-Id: I8151fb0cc79181c1126a1c00288dc3a96134aa70
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2024-05-08 21:31:33 +01:00
7b7f299bb4
gnu: r-rcpparmadillo: Update to 0.12.8.3.0.
...
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.12.8.3.0.
Change-Id: I92d8f11bc12a6a0ff7af789aaf0823fdcb33be05
2024-05-08 15:51:45 +02:00
52990b43e1
gnu: r-seuratobject: Update to 5.0.2.
...
* gnu/packages/cran.scm (r-seuratobject): Update to 5.0.2.
Change-Id: I5fef014a90c2b8cf709bfa07f96cd9757059c0fa
2024-05-08 15:51:45 +02:00
8e2a67a4fd
gnu: r-ggpmisc: Update to 0.5.6.
...
* gnu/packages/cran.scm (r-ggpmisc): Update to 0.5.6.
Change-Id: I380326e546d65f356cfd9e1a0f03656bc7c8e93a
2024-05-08 15:51:45 +02:00
d13d6f3d3c
gnu: Add r-mlr3verse.
...
* gnu/packages/cran.scm (r-mlr3verse): New variable.
Change-Id: I52c01fffd13c72b599ae5bc9ff809daea11eaa59
2024-05-08 15:07:04 +02:00
7da082bee9
gnu: Add r-mlr3viz.
...
* gnu/packages/cran.scm (r-mlr3viz): New variable.
Change-Id: Iedca442886ebeb09d26cfa44290192c582aeeef3
2024-05-08 15:07:04 +02:00
3de6e38a14
gnu: Add r-mlr3tuningspaces.
...
* gnu/packages/cran.scm (r-mlr3tuningspaces): New variable.
Change-Id: Ifb35e78dab862921f000b055d3fa1eee3ef79309
2024-05-08 15:07:04 +02:00
77fa0ca7c0
gnu: Add r-mlr3mbo.
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* gnu/packages/cran.scm (r-mlr3mbo): New variable.
Change-Id: I23d7af239f7ab55599faf99d5136621cc45c973f
2024-05-08 15:07:04 +02:00
113a6271e5
gnu: Add r-mlr3hyperband.
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* gnu/packages/cran.scm (r-mlr3hyperband): New variable.
Change-Id: I3e7a829da1f7687ef0bb201f6333bdd519cfa025
2024-05-08 15:07:04 +02:00
de01584414
gnu: Add r-mlr3fselect.
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* gnu/packages/cran.scm (r-mlr3fselect): New variable.
Change-Id: I28ced76c34d99c864c09cbf7b92658fb7676b22c
2024-05-08 15:07:04 +02:00
ab56d90bae
gnu: Add r-mlr3filters.
...
* gnu/packages/cran.scm (r-mlr3filters): New variable.
Change-Id: I94bd79843f5f35eeacb1ea788a76b63e9028f548
2024-05-08 15:07:04 +02:00
4171f8bf3f
gnu: Add r-mlr3data.
...
* gnu/packages/cran.scm (r-mlr3data): New variable.
Change-Id: I93bee828d1ac26da1146c853b4d88fbdec42905f
2024-05-08 15:07:04 +02:00
938f1c065e
gnu: Add r-mlr3cluster.
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* gnu/packages/cran.scm (r-mlr3cluster): New variable.
Change-Id: I3d970afeeaf4de1793974177bcf5abf64c957d6b
2024-05-08 15:07:04 +02:00
6745d692d4
gnu: rcas-web: Update to latest commit.
...
The latest commit fixes a problem in configure.ac.
* gnu/packages/bioinformatics.scm (rcas-web)[source]: Fetch from git.
[arguments]: Remove 'find-RCAS phase; use G-expression.
[inputs]: Drop labels. Use Guile 3.0.
[native-inputs]: Add autoconf and automake.
Change-Id: I6f1d300df589a99b9493b2857f58d49e468b210e
2024-05-08 12:53:43 +02:00
ba8d10c65a
FIXUP r-bigmelon
...
Change-Id: Ic9b038a93c14595da8575de5449b7aa0504d031e
2024-05-08 12:53:43 +02:00
babafe251c
gnu: r-icellnet: Update to 2.2.1-1.e10ee4a.
...
* gnu/packages/bioinformatics.scm (r-icellnet): Update to 2.2.1-1.e10ee4a.
[propagated-inputs]: Add r-complexheatmap and r-circlize.
Change-Id: Ib844f83cb1ca4f88259593153d9e66289307dccc
2024-05-08 12:53:43 +02:00
cb5b2d6d24
gnu: emacs-ess: Disable one more test.
...
* gnu/packages/statistics.scm (emacs-ess)[arguments]: Disable browser test.
Change-Id: Ia63f1e35c3eb4d0cce84cd5388b7376b39facb8e
2024-05-08 12:53:43 +02:00
5fe06b3bc5
gnu: r-fpc: Update to 2.2-12.
...
* gnu/packages/statistics.scm (r-fpc): Update to 2.2-12.
Change-Id: I0da322d7059b27b08de6f07216fc250827554412
2024-05-08 12:53:43 +02:00
5a4c6947a3
gnu: r-mclust: Update to 6.1.1.
...
* gnu/packages/statistics.scm (r-mclust): Update to 6.1.1.
Change-Id: I9fed05d2d124a07b8775306002bc8accde23fa80
2024-05-08 12:53:43 +02:00
820ff31ad9
gnu: r-sfsmisc: Update to 1.1-18.
...
* gnu/packages/statistics.scm (r-sfsmisc): Update to 1.1-18.
Change-Id: Iaaf71756973ebe6613848fc9785f4d867a9d4a66
2024-05-08 12:53:43 +02:00
85426f50cf
gnu: r-gtable: Update to 0.3.5.
...
* gnu/packages/statistics.scm (r-gtable): Update to 0.3.5.
Change-Id: Icc622408ebc0db096d9c82fdeebe9b4620b21b56
2024-05-08 12:53:43 +02:00
066f6f698a
gnu: r-ggplot2: Update to 3.5.1.
...
* gnu/packages/statistics.scm (r-ggplot2): Update to 3.5.1.
Change-Id: I3b18fcdfbf6b57ccd02114a364d5d6227856535c
2024-05-08 12:53:43 +02:00
de611a91c5
gnu: r-stringi: Update to 1.8.4.
...
* gnu/packages/statistics.scm (r-stringi): Update to 1.8.4.
Change-Id: Ifad35d93dcd2efdac025e1b29860609357eec75c
2024-05-08 12:53:43 +02:00
8456d51266
gnu: r-survival: Update to 3.6-4.
...
* gnu/packages/statistics.scm (r-survival): Update to 3.6-4.
Change-Id: Ie76a72abc4c23213e9ab382e78960b26d4816f89
2024-05-08 12:53:43 +02:00
2b4fb63498
gnu: r-matrix: Update to 1.7-0.
...
* gnu/packages/statistics.scm (r-matrix): Update to 1.7-0.
Change-Id: I7a9ae42611a916c8748bc2139ef08b478a533bfe
2024-05-08 12:53:43 +02:00
fa1f85c777
gnu: r-mass: Update to 7.3-60.2.
...
* gnu/packages/statistics.scm (r-mass): Update to 7.3-60.2.
Change-Id: I351639b3c07afebdc5d59866e493214fcb07c36b
2024-05-08 12:53:43 +02:00
9b27e26df7
gnu: r-ragg: Update to 1.3.1.
...
* gnu/packages/cran.scm (r-ragg): Update to 1.3.1.
Change-Id: Iac1219839875056725a38b4bb816447ac216abba
2024-05-08 12:53:43 +02:00
742d5b1673
gnu: r-mlr3: Update to 0.19.0.
...
* gnu/packages/cran.scm (r-mlr3): Update to 0.19.0.
Change-Id: I424e6285e79d0082da45a848d2f1e131ad7975ac
2024-05-08 12:53:43 +02:00
7fa235cc9b
gnu: r-mlr3pipelines: Update to 0.5.2.
...
* gnu/packages/cran.scm (r-mlr3pipelines): Update to 0.5.2.
Change-Id: I0179b7a822f86b7c4c24d7d3f15deab1838e27d3
2024-05-08 12:53:42 +02:00
5c5d63c3b8
gnu: r-iml: Update to 0.11.3.
...
* gnu/packages/cran.scm (r-iml): Update to 0.11.3.
Change-Id: I07cb8a5fb52b04ceab6b4e1a7aaf4133b9af8dd9
2024-05-08 12:53:42 +02:00
03e1518d57
gnu: r-stanheaders: Update to 2.32.7.
...
* gnu/packages/cran.scm (r-stanheaders): Update to 2.32.7.
Change-Id: I367bba897a937c915bd9b5b3e2246209c785e424
2024-05-08 12:53:42 +02:00
ea6f3dd9ae
gnu: r-quanteda: Update to 4.0.2.
...
* gnu/packages/cran.scm (r-quanteda): Update to 4.0.2.
Change-Id: I02fbefc305e1a7673c52359da86eae77964a47bb
2024-05-08 12:53:42 +02:00
ae1a664241
gnu: r-flexclust: Update to 1.4-2.
...
* gnu/packages/cran.scm (r-flexclust): Update to 1.4-2.
Change-Id: I1fe773b23e814ac5ebc5e52c855ba889c6c79f1b
2024-05-08 12:53:42 +02:00
58a34e1c9c
gnu: r-imager: Update to 1.0.1.
...
* gnu/packages/cran.scm (r-imager): Update to 1.0.1.
Change-Id: I75f935e3197d072148067d57947560397d4e7dff
2024-05-08 12:53:42 +02:00
fc1f6f1734
gnu: r-lda: Update to 1.5.2.
...
* gnu/packages/cran.scm (r-lda): Update to 1.5.2.
Change-Id: I2fe10d6cdb94982650c7f94ea7e011a1853ed8e1
2024-05-08 12:53:42 +02:00
c65406f254
gnu: r-mlbench: Update to 2.1-5.
...
* gnu/packages/cran.scm (r-mlbench): Update to 2.1-5.
Change-Id: If044d9180ce60eb105100ead97d0ffa5f9f3a87a
2024-05-08 12:53:42 +02:00
dd1fe56edc
gnu: r-apcluster: Update to 1.4.13.
...
* gnu/packages/cran.scm (r-apcluster): Update to 1.4.13.
Change-Id: Ib99a946abf710052daae5ee5fe4bf91f38ee1c0e
2024-05-08 12:53:42 +02:00
82499b5a91
gnu: r-nonnest2: Update to 0.5-7.
...
* gnu/packages/cran.scm (r-nonnest2): Update to 0.5-7.
Change-Id: I9d30b4374033517c9e25e3ba20fb2427df492381
2024-05-08 12:53:42 +02:00
6dc964cc19
gnu: r-pixmap: Update to 0.4-13.
...
* gnu/packages/cran.scm (r-pixmap): Update to 0.4-13.
Change-Id: Ia2270efb3fb0607cf9095b308673dcee1d04df32
2024-05-08 12:53:42 +02:00
52b495538d
gnu: r-gridpattern: Update to 1.2.1.
...
* gnu/packages/cran.scm (r-gridpattern): Update to 1.2.1.
Change-Id: Ib5f335fb1341df372aa85f1fc658509b4006045a
2024-05-08 12:53:42 +02:00
a5206d48fe
gnu: r-biocmanager: Update to 1.30.23.
...
* gnu/packages/cran.scm (r-biocmanager): Update to 1.30.23.
Change-Id: Ie6bd5daa07a9d9b3f120563735126a70ed0f882a
2024-05-08 12:53:42 +02:00
909b50265d
gnu: r-xopen: Update to 1.0.1.
...
* gnu/packages/cran.scm (r-xopen): Update to 1.0.1.
Change-Id: Ib6a2cf9f4ab8103277d43f45c5c4379bbb61894e
2024-05-08 12:53:42 +02:00
7cf39c3ed4
gnu: r-fs: Update to 1.6.4.
...
* gnu/packages/cran.scm (r-fs): Update to 1.6.4.
Change-Id: I1611b167864d37b1ff9249727f7e272ce10c103d
2024-05-08 12:53:42 +02:00
cbc2125aa3
gnu: r-labelled: Update to 2.13.0.
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* gnu/packages/cran.scm (r-labelled): Update to 2.13.0.
[propagated-inputs]: Add r-tidyselect.
Change-Id: I0fa1bd6fdd76fbf3900103c00310925662b359f5
2024-05-08 12:53:42 +02:00
ff52e6b37a
gnu: r-doby: Update to 4.6.21.
...
* gnu/packages/cran.scm (r-doby): Update to 4.6.21.
[propagated-inputs]: Remove r-magrittr; add r-boot, r-cowplot, r-modelr, r-rlang, and
r-tidyr.
Change-Id: I11a033414510a6ce09863eb69e27186471e85856
2024-05-08 12:53:42 +02:00
5c988ff569
gnu: r-flextable: Update to 0.9.6.
...
* gnu/packages/cran.scm (r-flextable): Update to 0.9.6.
Change-Id: Ib61b62ddb06d1eaea5b5a0cfa9ebfea381337190
2024-05-08 12:53:42 +02:00
9a343e53a9
gnu: r-prediction: Update to 0.3.17.
...
* gnu/packages/cran.scm (r-prediction): Update to 0.3.17.
Change-Id: Idf811d30e662c4ed25c1d4d9f0ead292b709957b
2024-05-08 12:53:42 +02:00
8f7f134a57
gnu: r-officer: Update to 0.6.6.
...
* gnu/packages/cran.scm (r-officer): Update to 0.6.6.
Change-Id: I2758460e3c1eb7f020530431d191970d4ecc6f22
2024-05-08 12:53:42 +02:00
b778d59156
gnu: r-rapiclient: Update to 0.1.4.
...
* gnu/packages/cran.scm (r-rapiclient): Update to 0.1.4.
Change-Id: I1c637b91a9463b2e8dd0f85fe80c89b41914ee79
2024-05-08 12:53:42 +02:00
8849663588
gnu: r-tinytex: Update to 0.51.
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* gnu/packages/cran.scm (r-tinytex): Update to 0.51.
Change-Id: Ia99bf297807fff8aaf5e3e7ec7eafe96b541dec2
2024-05-08 12:53:42 +02:00
ad7d89daef
gnu: r-debugme: Update to 1.2.0.
...
* gnu/packages/cran.scm (r-debugme): Update to 1.2.0.
Change-Id: I0a43ead356a49e59506be73ec7e449813e8e1dc6
2024-05-08 12:53:41 +02:00
f560edf277
gnu: r-ips: Update to 0.0.12.
...
* gnu/packages/cran.scm (r-ips): Update to 0.0.12.
[propagated-inputs]: Remove r-seqinr; add r-data-table.
Change-Id: I948da8f5d5e4813096db71560a2aead3003cec06
2024-05-08 12:53:41 +02:00
88ac0306d5
gnu: r-evd: Update to 2.3-7.
...
* gnu/packages/cran.scm (r-evd): Update to 2.3-7.
Change-Id: I6009ea9eb4138fd25542ef8c4bc1e51c60a257ab
2024-05-08 12:53:41 +02:00
be22689e75
gnu: r-sp: Update to 2.1-4.
...
* gnu/packages/cran.scm (r-sp): Update to 2.1-4.
Change-Id: Id4d21cf39ac47dba310f16d26d294ec314925b45
2024-05-08 12:53:41 +02:00
1b6f915a88
gnu: r-rcppspdlog: Update to 0.0.17.
...
* gnu/packages/cran.scm (r-rcppspdlog): Update to 0.0.17.
Change-Id: I2558509ee09e4a732e8a2aaf1addab22375f4d85
2024-05-08 12:53:41 +02:00
6f95883d01
FIXUP r-infercnv
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Change-Id: I94a80f498afb34052dc4b2c3394fd94a463241bc
2024-05-08 12:53:41 +02:00
5ad635ec49
gnu: r-job: Update to 0.3.1.
...
* gnu/packages/cran.scm (r-job): Update to 0.3.1.
Change-Id: I3c47b59da4d497df1ef4b19d85bf8cc1b618295d
2024-05-08 12:53:41 +02:00
40529de4f9
gnu: r-secretbase: Update to 0.5.0.
...
* gnu/packages/cran.scm (r-secretbase): Update to 0.5.0.
Change-Id: Ia0a2d14a98e43ef68794d7204fc6e60dfcf76fde
2024-05-08 12:53:41 +02:00
21c96d6d03
gnu: r-mboost: Update to 2.9-10.
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* gnu/packages/cran.scm (r-mboost): Update to 2.9-10.
Change-Id: I68b980e21438220989258c0d98791ab25e9211a6
2024-05-08 12:53:41 +02:00
c6d4cc67ec
gnu: r-oompadata: Update to 3.1.4.
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* gnu/packages/cran.scm (r-oompadata): Update to 3.1.4.
Change-Id: Id09f253cd6e62032fb6ffb90a776d3dfece8675b
2024-05-08 12:53:41 +02:00
80ead87638
gnu: r-ggpp: Update to 0.5.7.
...
* gnu/packages/cran.scm (r-ggpp): Update to 0.5.7.
[propagated-inputs]: Add r-vctrs.
Change-Id: Ib8e2ddcdd38a943183fa349eabdeef8db625566f
2024-05-08 12:53:41 +02:00
e76b664a36
gnu: r-brio: Update to 1.1.5.
...
* gnu/packages/cran.scm (r-brio): Update to 1.1.5.
Change-Id: I8cad71c2d24161c268698ac4fe72d910b81f034e
2024-05-08 12:53:41 +02:00
7ba06e0c7b
gnu: r-classdiscovery: Update to 3.4.5.
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* gnu/packages/bioconductor.scm (r-classdiscovery): Update to 3.4.5.
Change-Id: I8f712ffb99ff1fc94edf7095bb66ba10184843da
2024-05-08 12:53:41 +02:00
c35e5cecbc
gnu: r-valr: Update to 0.8.1.
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* gnu/packages/bioconductor.scm (r-valr): Update to 0.8.1.
Change-Id: I66b405f9baecdf7e11187748241d553614a39269
2024-05-08 12:53:41 +02:00
8182017710
gnu: r-scgate: Update to 1.6.2.
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* gnu/packages/bioconductor.scm (r-scgate): Update to 1.6.2.
Change-Id: I7c1d1884a07db5b6dcf0475fa524cde98297b62c
2024-05-08 12:53:41 +02:00
aebf218eb7
gnu: r-phyloseq: Update to 1.48.0.
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* gnu/packages/bioconductor.scm (r-phyloseq): Update to 1.48.0.
Change-Id: I6e9204c00ab56f6d1441ab15a01d9680de368e9e
2024-05-08 12:53:41 +02:00
23535051f4
gnu: r-tximeta: Update to 1.22.0.
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* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.22.0.
[propagated-inputs]: Add r-txdbmaker.
Change-Id: I1a87fadeb0cef5687abc3be91517c7cdcfaa950d
2024-05-08 12:53:41 +02:00
55d89a17f9
gnu: r-tricycle: Update to 1.12.0.
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* gnu/packages/bioconductor.scm (r-tricycle): Update to 1.12.0.
Change-Id: I469d3387d52cce2d443e08ca21f3c18334c7b1f1
2024-05-08 12:53:41 +02:00
7dd229853b
gnu: r-tcgabiolinks: Update to 2.32.0.
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* gnu/packages/bioconductor.scm (r-tcgabiolinks): Update to 2.32.0.
Change-Id: I8ea8c5b220a262e921bcc4448b039153d48ad5c8
2024-05-08 12:53:41 +02:00
3ea719d1bf
gnu: r-biscuiteer: Update to 1.18.0.
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* gnu/packages/bioconductor.scm (r-biscuiteer): Update to 1.18.0.
Change-Id: If9119ebcde80e8548df5bcd4ffab1b0dca4ca726
2024-05-08 12:53:41 +02:00
4689ba62f5
gnu: r-omnipathr: Update to 3.11.10.
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* gnu/packages/bioconductor.scm (r-omnipathr): Update to 3.11.10.
Change-Id: I3e93662d106c84cbe611f788f2c16f5caa748fbc
2024-05-08 12:53:41 +02:00
a37cf20566
gnu: r-omicade4: Update to 1.44.0.
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* gnu/packages/bioconductor.scm (r-omicade4): Update to 1.44.0.
Change-Id: Iace759b9cc18c774f8a595f5ae05aa7256078901
2024-05-08 12:53:40 +02:00
74d8555fc0
gnu: r-dmrseq: Update to 1.24.0.
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* gnu/packages/bioconductor.scm (r-dmrseq): Update to 1.24.0.
Change-Id: Ia0a2aff28eb12c730933c81a1afe203805c51a25
2024-05-08 12:53:40 +02:00
b138e6fc5b
gnu: r-dada2: Update to 1.32.0.
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* gnu/packages/bioconductor.scm (r-dada2): Update to 1.32.0.
Change-Id: I6e8764f77d05923b3534aff1388bf021491118fe
2024-05-08 12:53:40 +02:00
7cb5aac097
gnu: r-bsseq: Update to 1.40.0.
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* gnu/packages/bioconductor.scm (r-bsseq): Update to 1.40.0.
Change-Id: If2cb52db5144dd8c625d428c7a83736d0eb9ce68
2024-05-08 12:53:40 +02:00
73a75b1a72
gnu: r-biotmle: Update to 1.28.0.
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* gnu/packages/bioconductor.scm (r-biotmle): Update to 1.28.0.
Change-Id: Idd65b115b561e4069470133fdf70da803b7e463e
2024-05-08 12:53:40 +02:00
65a3deae8c
gnu: r-bioqc: Update to 1.32.0.
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* gnu/packages/bioconductor.scm (r-bioqc): Update to 1.32.0.
Change-Id: If59869b7ced6952d277b9fb45a25bd903abb9bb2
2024-05-08 12:53:40 +02:00
84047fe00d
gnu: r-bionet: Update to 1.64.0.
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* gnu/packages/bioconductor.scm (r-bionet): Update to 1.64.0.
Change-Id: I3a66573dfe5b4a2758bea8e7af6a05b22a14b218
2024-05-08 12:53:40 +02:00
7315d4d4e1
gnu: r-bionero: Update to 1.12.0.
...
* gnu/packages/bioconductor.scm (r-bionero): Update to 1.12.0.
Change-Id: I17d7d7bab2ea647e5a49c8f8482251dac34edda2
2024-05-08 12:53:40 +02:00
3150174b01
gnu: r-biomvrcns: Update to 1.44.0.
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* gnu/packages/bioconductor.scm (r-biomvrcns): Update to 1.44.0.
Change-Id: I7a392cab724c7757b4e41e472fd9644031674ddb
2024-05-08 12:53:40 +02:00
65e8360b94
gnu: r-biomvcclass: Update to 1.72.0.
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* gnu/packages/bioconductor.scm (r-biomvcclass): Update to 1.72.0.
Change-Id: I64be6be30c5a64517cc285842b438a9bbfd9b463
2024-05-08 12:53:40 +02:00
f6436cd8cc
gnu: r-mvcclass: Update to 1.78.0.
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* gnu/packages/bioconductor.scm (r-mvcclass): Update to 1.78.0.
Change-Id: Ib40c3da90a3a77dbac7563eb1c3053669069325c
2024-05-08 12:53:40 +02:00
d310e9ea81
gnu: r-biomformat: Update to 1.32.0.
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* gnu/packages/bioconductor.scm (r-biomformat): Update to 1.32.0.
Change-Id: I6d789e28a5f87ed6af111c20346c388e00f75697
2024-05-08 12:53:40 +02:00
f8cb2a50dc
gnu: r-biodb: Update to 1.12.0.
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* gnu/packages/bioconductor.scm (r-biodb): Update to 1.12.0.
Change-Id: If7001f4b7fd5393a45799562d2ece279e0a60215
2024-05-08 12:53:40 +02:00
5748d5c626
gnu: r-biocthis: Update to 1.14.0.
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* gnu/packages/bioconductor.scm (r-biocthis): Update to 1.14.0.
Change-Id: I1ee87d7a43237325ee4c4d93d9f69f0c3764a13b
2024-05-08 12:53:40 +02:00
5090b976d5
gnu: r-bcrank: Update to 1.66.0.
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* gnu/packages/bioconductor.scm (r-bcrank): Update to 1.66.0.
Change-Id: I33ab9ad800c550b90268e7382ca1237874ca8d86
2024-05-08 12:53:40 +02:00
a791fbd1a3
gnu: r-bbcanalyzer: Update to 1.34.0.
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* gnu/packages/bioconductor.scm (r-bbcanalyzer): Update to 1.34.0.
Change-Id: I14da55ec9487fe641aac8e7e85708253afc1bc83
2024-05-08 12:53:40 +02:00
856c5c775f
gnu: r-baynorm: Update to 1.22.0.
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* gnu/packages/bioconductor.scm (r-baynorm): Update to 1.22.0.
Change-Id: I49339ce8e370d45a1c2b018d14dc38a2ce1a8fef
2024-05-08 12:53:40 +02:00
019b2f05a3
gnu: r-bayesspace: Update to 1.14.0.
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* gnu/packages/bioconductor.scm (r-bayesspace): Update to 1.14.0.
Change-Id: Id08d540943a7821eba58dbfd933cc1efb30059aa
2024-05-08 12:53:40 +02:00
92383b27d6
gnu: r-bayesknockdown: Update to 1.30.0.
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* gnu/packages/bioconductor.scm (r-bayesknockdown): Update to 1.30.0.
Change-Id: I02fd2b4f87eca8e9ef6446a05f1b17445b37698c
2024-05-08 12:53:40 +02:00
a088ccde60
gnu: r-basilisk: Update to 1.16.0.
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* gnu/packages/bioconductor.scm (r-basilisk): Update to 1.16.0.
Change-Id: I48bf7fef391d1025cc348b6f76538523c4adb1e8
2024-05-08 12:53:40 +02:00
4cf075578a
gnu: r-basilisk-utils: Update to 1.16.0.
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* gnu/packages/bioconductor.scm (r-basilisk-utils): Update to 1.16.0.
Change-Id: I4c6a737383c616b990a880848edfae7fec2d0ee5
2024-05-08 12:53:40 +02:00
a6a6760a3e
gnu: r-basicstarrseq: Update to 1.32.0.
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* gnu/packages/bioconductor.scm (r-basicstarrseq): Update to 1.32.0.
Change-Id: I282493d98bc9d765ac29a28c58bc6531b0153dd5
2024-05-08 12:53:40 +02:00
f5ac7b45a1
gnu: r-basics: Update to 2.16.0.
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* gnu/packages/bioconductor.scm (r-basics): Update to 2.16.0.
Change-Id: Ie3d41d7d58bc45d9e95379d0d1523e21e09009e0
2024-05-08 12:53:40 +02:00
f01e5511a2
gnu: r-basic4cseq: Update to 1.40.0.
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* gnu/packages/bioconductor.scm (r-basic4cseq): Update to 1.40.0.
Change-Id: Idba4d11fc6def781e93c7d575c93f09c546e3170
2024-05-08 12:53:40 +02:00
03d957d0db
gnu: r-dir-expiry: Update to 1.12.0.
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* gnu/packages/bioconductor.scm (r-dir-expiry): Update to 1.12.0.
Change-Id: I5d75a7d3e56963c653d20b3c9cce8023b76306ac
2024-05-08 12:53:39 +02:00
d80573f55e
gnu: r-genetclassifier: Update to 1.44.0.
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* gnu/packages/bioconductor.scm (r-genetclassifier): Update to 1.44.0.
Change-Id: I750ee3bacbf9e819ef0853a3f951f4f32ab7b77e
2024-05-08 12:53:39 +02:00
249598455d
gnu: r-minet: Update to 3.62.0.
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* gnu/packages/bioconductor.scm (r-minet): Update to 3.62.0.
Change-Id: I2519b6e7526c481bf58f2ba75b2e0a1381f41679
2024-05-08 12:53:39 +02:00
581f74075e
gnu: r-biobtreer: Update to 1.16.0.
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* gnu/packages/bioconductor.scm (r-biobtreer): Update to 1.16.0.
Change-Id: I8917872cb9e42225fa69750d50b66c745810c58d
2024-05-08 12:53:39 +02:00
736fcfd110
gnu: r-bgeedb: Update to 2.30.0.
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* gnu/packages/bioconductor.scm (r-bgeedb): Update to 2.30.0.
Change-Id: I61720c75925a44f1c6e8c94d8ca18271005a662c
2024-05-08 12:53:39 +02:00
ffb3969e8a
gnu: r-beclear: Update to 2.20.0.
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* gnu/packages/bioconductor.scm (r-beclear): Update to 2.20.0.
Change-Id: I16ff50c678cf7e56002083f8e9c1eec3053354d1
2024-05-08 12:53:39 +02:00
6aed2982ec
gnu: r-megadepth: Update to 1.14.0.
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* gnu/packages/bioconductor.scm (r-megadepth): Update to 1.14.0.
[inputs]: Remove megadepth.
Change-Id: Ia0fc8a1e7266a996249f04447eabf9cf86b00f07
2024-05-08 12:53:39 +02:00
3f806f9667
gnu: r-ballgown: Update to 2.36.0.
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* gnu/packages/bioconductor.scm (r-ballgown): Update to 2.36.0.
Change-Id: Ia60e45a814c4f6bb873b25a7e959b593fcdebb0d
2024-05-08 12:53:39 +02:00
531842c537
gnu: r-guitar: Update to 2.20.0.
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* gnu/packages/bioconductor.scm (r-guitar): Update to 2.20.0.
Change-Id: Ic9bb33324aac858f5fc056cf0fe393f7031c949e
2024-05-08 12:53:39 +02:00
7579df216b
gnu: r-chromstar: Update to 1.30.0.
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* gnu/packages/bioconductor.scm (r-chromstar): Update to 1.30.0.
Change-Id: Id729863b51653a14a0e30558065d69dc14df375e
2024-05-08 12:53:39 +02:00
6cf9da8ff3
gnu: r-snpstats: Update to 1.54.0.
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* gnu/packages/bioconductor.scm (r-snpstats): Update to 1.54.0.
Change-Id: Iea939d944d7574c4da573e2d84b43850dc204762
2024-05-08 12:53:39 +02:00
50df6f88e3
gnu: r-snprelate: Update to 1.38.0.
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* gnu/packages/bioconductor.scm (r-snprelate): Update to 1.38.0.
Change-Id: Ic7b56fc80e6983ee4f86a2de43ad1f831584911f
2024-05-08 12:53:39 +02:00
38f7662dc5
gnu: r-pathview: Update to 1.44.0.
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* gnu/packages/bioconductor.scm (r-pathview): Update to 1.44.0.
Change-Id: I1b186e58ff9116f403295122f02e03b018de0f1c
2024-05-08 12:53:39 +02:00
9a0b026184
gnu: r-parody: Update to 1.62.0.
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* gnu/packages/bioconductor.scm (r-parody): Update to 1.62.0.
Change-Id: I558464136d242e6e6d62974b2b8df324faf5c0f2
2024-05-08 12:53:39 +02:00
Suhail Singh
Andy Tai
Fredrik Salomonsson
Frank Terbeck
Giacomo Leidi via Guix-patches via
Ashish SHUKLA
Juliana Sims
Efraim Flashner
Vinicius Monego
Felix Lechner
Arun Isaac
Zheng Junjie
Timotej Lazar
Tomas Volf
bigbug
Roman Scherer
Sharlatan Hellseher
Dariqq
Ricardo Wurmus
Mădălin Ionel Patrașcu