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114138 Commits (2ee15aee56af61f9ca21f6aa057659377b3a4b09)

Author SHA1 Message Date
Ricardo Wurmus 2ee15aee56
gnu: r-arrmnormalization: Update to 1.40.0. 
* gnu/packages/bioconductor.scm (r-arrmnormalization): Update to 1.40.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 8f88c0243c
gnu: r-progeny: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-progeny): Update to 1.22.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 0bffa9d7e7
gnu: r-rbowtie2: Update to 2.6.0. 
* gnu/packages/bioconductor.scm (r-rbowtie2): Update to 2.6.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 5c7824bffa
gnu: r-zfpkm: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-zfpkm): Update to 1.22.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 8f89dba276
gnu: r-zinbwave: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-zinbwave): Update to 1.22.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus f8add36afb
gnu: r-webbioc: Update to 1.72.0. 
* gnu/packages/bioconductor.scm (r-webbioc): Update to 1.72.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 58a016c5b2
gnu: r-widgettools: Update to 1.78.0. 
* gnu/packages/bioconductor.scm (r-widgettools): Update to 1.78.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus f86f2584f9
gnu: r-wiggleplotr: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-wiggleplotr): Update to 1.24.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus a8a248b0c8
gnu: r-wrench: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-wrench): Update to 1.18.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 1ad2255a5b
gnu: r-wppi: Update to 1.8.0. 
* gnu/packages/bioconductor.scm (r-wppi): Update to 1.8.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus dd19f928e7
gnu: r-xcms: Update to 3.22.0. 
* gnu/packages/bioconductor.scm (r-xcms): Update to 3.22.0.
[propagated-inputs]: Add r-multtest.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 48ad54e1c0
gnu: r-massspecwavelet: Update to 1.66.0. 
* gnu/packages/bioconductor.scm (r-massspecwavelet): Update to 1.66.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 88acb3def5
gnu: r-roar: Update to 1.36.0. 
* gnu/packages/bioconductor.scm (r-roar): Update to 1.36.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 4c26b3049a
gnu: r-yarn: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-yarn): Update to 1.26.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 041dbd604b
gnu: r-quantro: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-quantro): Update to 1.34.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 48e5c920d2
gnu: r-gcrma: Update to 2.72.0. 
* gnu/packages/bioconductor.scm (r-gcrma): Update to 2.72.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus a88af8976b
gnu: r-yapsa: Update to 1.25.0. 
* gnu/packages/bioconductor.scm (r-yapsa): Update to 1.25.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus ef2b8e94bf
gnu: r-somaticsignatures: Update to 2.36.0. 
* gnu/packages/bioconductor.scm (r-somaticsignatures): Update to 2.36.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 46158e258b
gnu: r-gtrellis: Update to 1.32.0. 
* gnu/packages/bioconductor.scm (r-gtrellis): Update to 1.32.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 7cbc47eadd
gnu: r-yamss: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-yamss): Update to 1.26.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 6f5209f1a9
gnu: r-ebimage: Update to 4.42.0. 
* gnu/packages/bioconductor.scm (r-ebimage): Update to 4.42.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus ba31e05d75
gnu: r-aucell: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-aucell): Update to 1.22.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus bade0db654
gnu: r-allelicimbalance: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-allelicimbalance): Update to 1.38.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus ecc70c623f
gnu: r-annotationtools: Update to 1.74.0. 
* gnu/packages/bioconductor.scm (r-annotationtools): Update to 1.74.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus c901ed6127
gnu: r-gofuncr: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-gofuncr): Update to 1.20.0.
 2023-04-29 20:28:01 +02:00
Ricardo Wurmus 88362fc7ff
gnu: r-atacseqqc: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.24.0.
 2023-04-29 20:28:01 +02:00
Ricardo Wurmus 98e54bf5ca
gnu: r-genomicscores: Update to 2.12.0. 
* gnu/packages/bioconductor.scm (r-genomicscores): Update to 2.12.0.
 2023-04-29 20:28:01 +02:00
Ricardo Wurmus 46b87ee7e7
gnu: r-bionetstat: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-bionetstat): Update to 1.20.0.
[source]: Delete minified JavaScript file.
[arguments]: Add 'process-javascript phase.
[native-inputs]: Add esbuild and r-rmarkdown.
 2023-04-29 20:28:01 +02:00
Ricardo Wurmus 1d91760996
gnu: r-motifstack: Update to 1.44.0. 
* gnu/packages/bioconductor.scm (r-motifstack): Update to 1.44.0.
[source]: Delete minified JavaScript file.
[arguments]: Add 'process-javascript phase.
[native-inputs]: Add esbuild and sources for d3.v4.js.
 2023-04-29 20:28:01 +02:00
Ricardo Wurmus dfd9bb7b1a
gnu: r-motifbreakr: Update to 2.13.7. 
* gnu/packages/bioconductor.scm (r-motifbreakr): Update to 2.13.7.
 2023-04-29 20:28:01 +02:00
Ricardo Wurmus cee1f0ae56
gnu: r-motifdb: Update to 1.42.0. 
* gnu/packages/bioconductor.scm (r-motifdb): Update to 1.42.0.
[native-inputs]: Add r-formatr, r-markdown, and r-rmarkdown.
 2023-04-29 20:28:01 +02:00
Ricardo Wurmus 4d36726a8c
gnu: r-rgadem: Update to 2.48.0. 
* gnu/packages/bioconductor.scm (r-rgadem): Update to 2.48.0.
 2023-04-29 20:28:01 +02:00
Ricardo Wurmus d4f475a68b
gnu: r-bacon: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-bacon): Update to 1.28.0.
 2023-04-29 20:28:01 +02:00
Ricardo Wurmus 17f1c0e530
gnu: r-abseqr: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-abseqr): Update to 1.18.0.
 2023-04-29 20:28:01 +02:00
Ricardo Wurmus 6fbb674db9
gnu: r-a4: Update to 1.48.0. 
* gnu/packages/bioconductor.scm (r-a4): Update to 1.48.0.
 2023-04-29 20:28:01 +02:00
Ricardo Wurmus f9f9c3f64e
gnu: r-a4base: Update to 1.48.0. 
* gnu/packages/bioconductor.scm (r-a4base): Update to 1.48.0.
 2023-04-29 20:28:01 +02:00
Ricardo Wurmus 775bb851d1
gnu: r-a4reporting: Update to 1.48.0. 
* gnu/packages/bioconductor.scm (r-a4reporting): Update to 1.48.0.
 2023-04-29 20:28:01 +02:00
Ricardo Wurmus 71118c1b26
gnu: r-a4preproc: Update to 1.48.0. 
* gnu/packages/bioconductor.scm (r-a4preproc): Update to 1.48.0.
 2023-04-29 20:28:01 +02:00
Ricardo Wurmus d2e98617e8
gnu: r-a4classif: Update to 1.48.0. 
* gnu/packages/bioconductor.scm (r-a4classif): Update to 1.48.0.
 2023-04-29 20:28:01 +02:00
Ricardo Wurmus d596e1db96
gnu: r-a4core: Update to 1.48.0. 
* gnu/packages/bioconductor.scm (r-a4core): Update to 1.48.0.
 2023-04-29 20:28:01 +02:00
Ricardo Wurmus ae28601ad1
gnu: r-annaffy: Update to 1.72.0. 
* gnu/packages/bioconductor.scm (r-annaffy): Update to 1.72.0.
 2023-04-29 20:28:01 +02:00
Ricardo Wurmus 34b3010a74
gnu: r-mlinterfaces: Update to 1.80.0. 
* gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.80.0.
[native-inputs]: Add r-knitr.
 2023-04-29 20:28:01 +02:00
Ricardo Wurmus 46dd98333f
gnu: r-clusterexperiment: Update to 2.20.0. 
* gnu/packages/bioconductor.scm (r-clusterexperiment): Update to 2.20.0.
 2023-04-29 20:28:01 +02:00
Ricardo Wurmus e2484544a5
gnu: r-clusterprofiler: Update to 4.8.0. 
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.8.0.
 2023-04-29 20:28:01 +02:00
Ricardo Wurmus e878a97766
gnu: r-enrichplot: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.20.0.
 2023-04-29 20:28:01 +02:00
Ricardo Wurmus 96575cde15
gnu: r-dose: Update to 3.26.0. 
* gnu/packages/bioconductor.scm (r-dose): Update to 3.26.0.
 2023-04-29 20:28:01 +02:00
Ricardo Wurmus d85403b837
gnu: r-fgsea: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-fgsea): Update to 1.26.0.
[propagated-inputs]: Add r-scales.
 2023-04-29 20:28:01 +02:00
Ricardo Wurmus 490e8a9004
gnu: r-fcscan: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-fcscan): Update to 1.14.0.
 2023-04-29 20:28:01 +02:00
Ricardo Wurmus 2cbb845e7d
gnu: r-anota: Update to 1.48.0. 
* gnu/packages/bioconductor.scm (r-anota): Update to 1.48.0.
 2023-04-29 20:28:01 +02:00
Ricardo Wurmus 288da213c8
gnu: r-gosemsim: Update to 2.26.0. 
* gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.26.0.
 2023-04-29 20:28:01 +02:00