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128810 Commits (32d4f40589e32cbac6549c50962011084f13d9fc)

Author SHA1 Message Date
Ricardo Wurmus 757f9282df
gnu: r-sp: Update to 2.1-2. 
* gnu/packages/cran.scm (r-sp): Update to 2.1-2.

Change-Id: I5901df096356a7b728cb6204b3a6e28e76a6b511
 2023-12-15 16:13:08 +01:00
Ricardo Wurmus 7c62e715bc
gnu: r-ggally: Update to 2.2.0. 
* gnu/packages/cran.scm (r-ggally): Update to 2.2.0.
[propagated-inputs]: Remove r-forcats and r-reshape; add r-ggstats and r-magrittr.

Change-Id: I70ad817082ba836c8e50b012aaa0e74fbd986de3
 2023-12-15 16:13:08 +01:00
Ricardo Wurmus 7696d8869e
gnu: Add r-ggstats. 
* gnu/packages/cran.scm (r-ggstats): New variable.

Change-Id: I0fb9465e059839443913b6935779e9656b1cc9ab
 2023-12-15 16:13:08 +01:00
Ricardo Wurmus 7714e8fd32
gnu: Add r-broom-helpers. 
* gnu/packages/cran.scm (r-broom-helpers): New variable.

Change-Id: I01e43ef17159ba8802983b37e522c03d1a17ae10
 2023-12-15 16:13:08 +01:00
Ricardo Wurmus 780c8c9349
gnu: r-progress: Update to 1.2.3. 
* gnu/packages/cran.scm (r-progress): Update to 1.2.3.

Change-Id: I4a6ae755ea2021d32d4b0d1ca43a077af48c4e5b
 2023-12-15 16:13:08 +01:00
Ricardo Wurmus 7312e1060d
gnu: r-ctrdata: Update to 1.16.0. 
* gnu/packages/cran.scm (r-ctrdata): Update to 1.16.0.
[propagated-inputs]: Add r-readr, r-v8, and r-zip.

Change-Id: I766fc39274d465e50ede116f54d6b565b0f1e05e
 2023-12-15 16:13:08 +01:00
Ricardo Wurmus 5df0601f42
gnu: r-rcppspdlog: Update to 0.0.15. 
* gnu/packages/cran.scm (r-rcppspdlog): Update to 0.0.15.

Change-Id: I115a68824c3aadaf4fd1994c2b047df84f49ee95
 2023-12-15 16:13:08 +01:00
Ricardo Wurmus 4ff7edccc8
gnu: r-pls: Update to 2.8-3. 
* gnu/packages/cran.scm (r-pls): Update to 2.8-3.

Change-Id: I672134fe44ac27a1f31ff37fc3318e30d40523e8
 2023-12-15 16:13:08 +01:00
Ricardo Wurmus 04023acf69
gnu: r-haven: Update to 2.5.4. 
* gnu/packages/cran.scm (r-haven): Update to 2.5.4.

Change-Id: I2b695c09e033f00e10715119bbb4cba8666854dd
 2023-12-15 16:13:08 +01:00
Ricardo Wurmus 35d58172f5
gnu: r-ggmap: Update to 4.0.0. 
* gnu/packages/cran.scm (r-ggmap): Update to 4.0.0.
[propagated-inputs]: Remove r-rgooglemaps.

Change-Id: I5ff9480ef268cadca62434f29b102ef977be36ab
 2023-12-15 16:13:08 +01:00
Ricardo Wurmus fa0659e7fc
gnu: r-sass: Update to 0.4.8. 
* gnu/packages/cran.scm (r-sass): Update to 0.4.8.

Change-Id: Ie8c6ecd7e79549c613a85500d98598c42bc332ab
 2023-12-15 16:13:08 +01:00
Ricardo Wurmus 9e04bd09d3
gnu: r-jqr: Update to 1.3.3. 
* gnu/packages/cran.scm (r-jqr): Update to 1.3.3.

Change-Id: I3415c097756c79934ecdd9b933ecfef2fa8efad1
 2023-12-15 16:13:08 +01:00
Ricardo Wurmus 80f2178bf1
gnu: r-rstpm2: Update to 1.6.3. 
* gnu/packages/cran.scm (r-rstpm2): Update to 1.6.3.
[propagated-inputs]: Add r-mvtnorm.

Change-Id: If1b2717851f2da6cae135c43fc00afb2bcdb9f80
 2023-12-15 16:13:08 +01:00
Ricardo Wurmus 058e3a34f8
gnu: r-curl: Update to 5.2.0. 
* gnu/packages/cran.scm (r-curl): Update to 5.2.0.

Change-Id: I793998e996e00eb7404d00d7d3f07bfa00d63940
 2023-12-15 16:13:08 +01:00
Ricardo Wurmus 1f70eaa334
gnu: r-htmlwidgets: Update to 1.6.4. 
* gnu/packages/cran.scm (r-htmlwidgets): Update to 1.6.4.

Change-Id: I0bfc9559f93d97acb6d609d57c82bd7bc8127253
 2023-12-15 16:13:08 +01:00
Ricardo Wurmus a02c770be4
gnu: r-jsonlite: Update to 1.8.8. 
* gnu/packages/cran.scm (r-jsonlite): Update to 1.8.8.

Change-Id: I1604ece653980c17eef6cca6c1895bc2b4f3e2ec
 2023-12-15 16:13:08 +01:00
Ricardo Wurmus 882d1e7d8c
gnu: r-httpuv: Update to 1.6.13. 
* gnu/packages/cran.scm (r-httpuv): Update to 1.6.13.

Change-Id: I5e1269f481de948de0ec589975a15455d326e491
 2023-12-15 16:13:08 +01:00
Ricardo Wurmus 9cf5f6fc41
gnu: r-morpho: Update to 2.12. 
* gnu/packages/cran.scm (r-morpho): Update to 2.12.

Change-Id: I7a1b3740db151be1526ef1ba4181721dd54c286b
 2023-12-15 16:13:08 +01:00
Ricardo Wurmus 4ff509356a
gnu: r-tgstat: Update to 2.3.25. 
* gnu/packages/cran.scm (r-tgstat): Update to 2.3.25.

Change-Id: Ic9d0eed09874eacc2f1d8e7409621231b43b801f
 2023-12-15 16:13:08 +01:00
Ricardo Wurmus 80c81c5b94
gnu: r-tgp: Update to 2.4-22. 
* gnu/packages/cran.scm (r-tgp): Update to 2.4-22.

Change-Id: I65274aa057b93fc8e98108953f8b7b3ee5f6a15d
 2023-12-15 16:13:08 +01:00
Ricardo Wurmus 96ce996cd4
gnu: r-mboost: Update to 2.9-9. 
* gnu/packages/cran.scm (r-mboost): Update to 2.9-9.

Change-Id: Iae55fc9098627dd465cc0ee01e6b280c9239d5d1
 2023-12-15 16:13:07 +01:00
Ricardo Wurmus dd16b4ac2b
gnu: r-philentropy: Update to 0.8.0. 
* gnu/packages/cran.scm (r-philentropy): Update to 0.8.0.

Change-Id: I961746348d6d1683937f164feaa4ea943ca970db
 2023-12-15 16:13:07 +01:00
Ricardo Wurmus bc10196ab2
gnu: r-ggside: Update to 0.2.3. 
* gnu/packages/cran.scm (r-ggside): Update to 0.2.3.
[propagated-inputs]: Add r-cli.

Change-Id: Ifa75fca71615b3b31152b3ff27c20a759b9480fe
 2023-12-15 16:13:07 +01:00
Ricardo Wurmus 4f1c47ff64
gnu: r-ggpmisc: Update to 0.5.5. 
* gnu/packages/cran.scm (r-ggpmisc): Update to 0.5.5.

Change-Id: Ib25b40f4dd7e1ae5b5d417658246b80d0452de57
 2023-12-15 16:13:07 +01:00
Ricardo Wurmus 60cf193569
gnu: r-zcompositions: Update to 1.5. 
* gnu/packages/cran.scm (r-zcompositions): Update to 1.5.

Change-Id: I176c60d21e091b12ca1592673c9869de9c360c7f
 2023-12-15 16:13:07 +01:00
Ricardo Wurmus 59e89bf8e6
gnu: r-v8: Update to 4.4.1. 
* gnu/packages/cran.scm (r-v8): Update to 4.4.1.

Change-Id: I326dd72db909935820e345e2f881994c55443c7e
 2023-12-15 16:13:07 +01:00
Ricardo Wurmus ca07e6e9e3
gnu: r-ggdist: Update to 3.3.1. 
* gnu/packages/cran.scm (r-ggdist): Update to 3.3.1.
[propagated-inputs]: Add r-rcpp.

Change-Id: Ie60c46e98a2b5305d373b5a21df0625fe7b5d6c0
 2023-12-15 16:13:07 +01:00
Ricardo Wurmus 8e710b7d9d
gnu: r-dbscan: Update to 1.1-12. 
* gnu/packages/cran.scm (r-dbscan): Update to 1.1-12.

Change-Id: If28f2657e8de4a5d893bb74f4559d17249acf714
 2023-12-15 16:13:07 +01:00
Ricardo Wurmus c4dbd4b4f4
gnu: r-collapse: Update to 2.0.7. 
* gnu/packages/cran.scm (r-collapse): Update to 2.0.7.

Change-Id: I46c2863921b7d11b0e7fc3a682ea238962fcc9c4
 2023-12-15 16:13:07 +01:00
Ricardo Wurmus 75e93cd0f5
gnu: r-brio: Update to 1.1.4. 
* gnu/packages/cran.scm (r-brio): Update to 1.1.4.

Change-Id: I5dfce63a5686b1e0bf66c42c476ff9b04b0a828d
 2023-12-15 16:13:07 +01:00
Ricardo Wurmus 1354314cdf
gnu: r-abn: Update to 3.0.4. 
* gnu/packages/bioconductor.scm (r-abn): Update to 3.0.4.

Change-Id: I15970d14205b32f254ecf2c5207e98d7289ac281
 2023-12-15 16:13:07 +01:00
Ricardo Wurmus b6c482e860
gnu: r-fhtest: Update to 1.5.1. 
* gnu/packages/bioconductor.scm (r-fhtest): Update to 1.5.1.

Change-Id: I08513b08ee2fc72ab00b372a013dbfa6ed064fc1
 2023-12-15 16:13:07 +01:00
Ricardo Wurmus c544f5ce82
gnu: r-biomartr: Update to 1.0.7. 
* gnu/packages/bioconductor.scm (r-biomartr): Update to 1.0.7.

Change-Id: I7f02a92d86506b4fbca950a13ed106753e1b7f76
 2023-12-15 16:13:07 +01:00
Ricardo Wurmus 633db77deb
gnu: r-arrow: Update to 14.0.0.2. 
* gnu/packages/cran.scm (r-arrow): Update to 14.0.0.2.

Change-Id: Icff453a1aa0ad59d7e707a0fdfc23e3d4dd1f7c0
 2023-12-15 16:13:07 +01:00
Ricardo Wurmus 517fedb360
gnu: apache-arrow: Update to 14.0.0. 
* gnu/packages/databases.scm (apache-arrow): Update to 14.0.0.

Change-Id: I5689b37fbfee2cb049cbaf351caed2e3cd07094c
 2023-12-15 16:13:07 +01:00
Ricardo Wurmus 8f72116222
gnu: r-interactivedisplay: Add missing input. 
* gnu/packages/bioconductor.scm (r-interactivedisplay)[propagated-inputs]: Add
r-biocmanager.

Change-Id: I7e29c28202496ba58ec35adf03b77ac84691e492
 2023-12-15 16:13:07 +01:00
Ricardo Wurmus 837c91501e
gnu: r-dt: Update to 0.31. 
* gnu/packages/statistics.scm (r-dt): Update to 0.31.
[source]: Simplify by using git repositories for extensions instead of
fetching every file from the datatables CDN.
[native-inputs]: Update to datatables-plugins 1.13.6.

Change-Id: Ibebd2ae1f3b4d51739b756ad808bebf2663e1009
 2023-12-15 16:13:07 +01:00
Ricardo Wurmus 2efa72be46
gnu: r-interactivedisplay: Add missing JavaScript sources. 
* gnu/packages/bioconductor.scm (r-interactivedisplay)[source]: Update list of
minified JavaScript files to delete.
[arguments]: Use minify-build-system to process JavaScript files.
[native-inputs]: Add js-d3-v2; relabel js-datatables as js-datatables-1.10;
add js-datatables-1.9.

Change-Id: If8b6d9378680e9f69d71be56ce28add70b1a4564
 2023-12-15 16:13:07 +01:00
Ricardo Wurmus 8881398803
gnu: r-bookdown: Update to 0.37. 
* gnu/packages/cran.scm (r-bookdown): Update to 0.37.
[arguments]: Use minify-build-system to process JavaScript.

Change-Id: I53ff5ef1527976e40e7caf8b34f77af7eb3e833f
 2023-12-15 16:13:07 +01:00
Ricardo Wurmus b55d0a4abf
gnu: r-crosstalk: Update to 1.2.1. 
* gnu/packages/cran.scm (r-crosstalk): Update to 1.2.1.
[source]: Add snippet to delete bundled minified JavaScript.
[arguments]: Use minify-build-system to minify JavaScript files from source;
add phase 'replace-bundled-minified-JavaScript.
[native-inputs]: Add esbuild and js-selectize.

Change-Id: I2a4a773d5f40a8f27e594e2f1b627624cab8755e
 2023-12-15 16:13:07 +01:00
Ricardo Wurmus 5374d0d89b
gnu: Add js-datatables-1.9. 
* gnu/packages/javascript.scm (js-datatables-1.9): New variable.

Change-Id: I9b022e12119247c8385ebbcec07f54c4106155df
 2023-12-15 16:13:07 +01:00
Ricardo Wurmus b3fd9eeb81
gnu: r-bslib: Update to 0.6.1. 
* gnu/packages/cran.scm (r-bslib): Update to 0.6.1.
[source]: Update list of minified JavaScript to delete.
[arguments]: Use minify-build-system; update process-javascript phase.
[propagated-inputs]: Add r-lifecycle.
[native-inputs]: Remove typescript-components; update js-bootstrap5-bundle.

Change-Id: I0aeae3f11a35211e6b429461042dbce2eca85313
 2023-12-15 16:13:07 +01:00
Ricardo Wurmus 39b8404168
gnu: r-pkgbuild: Update to 1.4.3. 
* gnu/packages/cran.scm (r-pkgbuild): Update to 1.4.3.
[propagated-inputs]: Remove r-crayon, r-prettyunits, and r-rprojroot.

Change-Id: I0b83188e69aae19ddc62d71da18358777ed9c454
 2023-12-15 16:13:07 +01:00
Ricardo Wurmus 1da863cc3b
gnu: r-wgcna: Update to 1.72-5. 
* gnu/packages/bioconductor.scm (r-wgcna): Update to 1.72-5.

Change-Id: Ib9d3b0e6ba191839e4b22cb0b8f63e6b0e9d2baa
 2023-12-15 16:13:07 +01:00
Ricardo Wurmus 5ad3b5d786
gnu: r-spacetime: Update to 1.3-1. 
* gnu/packages/cran.scm (r-spacetime): Update to 1.3-1.

Change-Id: I1fe54f97452c0dd738c6cfced56c406498de73c4
 2023-12-15 16:13:07 +01:00
Ricardo Wurmus 51702785da
gnu: r-openmx: Update to 2.21.11. 
* gnu/packages/cran.scm (r-openmx): Update to 2.21.11.

Change-Id: I1349e0965508f42d183d2e705c356fdd3ac9faf0
 2023-12-15 16:13:06 +01:00
Ricardo Wurmus 4d272fa3a9
gnu: r-spacyr: Update to 1.3.0. 
* gnu/packages/cran.scm (r-spacyr): Update to 1.3.0.
[native-inputs]: Add r-r-rsp.

Change-Id: I999db8ad92b2d0799ffa4350847980db30c75409
 2023-12-15 16:13:06 +01:00
Ricardo Wurmus af28dc137f
gnu: r-scales: Update to 1.3.0. 
* gnu/packages/cran.scm (r-scales): Update to 1.3.0.
[propagated-inputs]: Add r-cli and r-glue.

Change-Id: I37c4a09d6910f9d8885d253547808d3dc2761748
 2023-12-15 16:13:06 +01:00
Ricardo Wurmus 929079dfbc
gnu: r-pbdmpi: Update to 0.5-1. 
* gnu/packages/cran.scm (r-pbdmpi): Update to 0.5-1.

Change-Id: Iede248c40a0a57bc5a23015745f426cd4485b38c
 2023-12-15 16:13:06 +01:00
Ricardo Wurmus d6239e12d4
gnu: r-rjava: Update to 1.0-10. 
* gnu/packages/cran.scm (r-rjava): Update to 1.0-10.
[source]: Delete bundled minified JavaScript.
[arguments]: Use minify-build-system in new phase
'replace-bundled-minified-JavaScript.
[native-inputs]: Add esbuild.

Change-Id: I6ca7724ea61f53995067cca8d6835fe061621567
 2023-12-15 16:13:06 +01:00