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Author SHA1 Message Date
Arne Babenhauserheide eb71211478
gnu: python-aiohttp: Update to 3.5.4
* gnu/packages/python-web.scm (python-aiohttp): Update to 3.5.4.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-15 12:48:49 +02:00
Arne Babenhauserheide c31302fda7
gnu: python-aiorpcx: Update to 0.18.3
* gnu/packages/python-web.scm (python-aiorpcx): Update to 0.18.3

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-15 12:48:49 +02:00
Ludovic Courtès e591541d36
doc: Build a top-level index of the manuals.
Suggested by Julien Lepiller.

* doc/build.scm (html-manual-indexes)[build]: Add 'with-extensions'.
(translate): Actually honor DOMAIN.  Add call to 'bindtextdomain' for
ISO-CODES.
(%iso639-languages): New variable.
(language-code->name, top-level-index): New procedures.
Add call to 'write-html' for OUTPUT/index.html.
2019-07-15 12:48:49 +02:00
Ludovic Courtès 21bec78357
doc: Generalize build procedures of HTML indexes.
* doc/build.scm (html-manual-indexes)[build](sxml-index): Generalize;
add a 'title' and a 'body' parameter and honor them.
(language-index): New procedure.
(write-index): Remove.
(write-html): New procedure.
Use 'write-html' and 'language-index'.
2019-07-15 12:48:49 +02:00
Guillaume Le Vaillant cb45aad9b0
gnu: monero: Make tests more verbose.
Increase the verbosity of the 'check' phase to prevent 'core_tests' from
hitting 'max-silent-timeout'.

* gnu/packages/finance.scm (monero)[arguments]: Add '--verbose' option to
  'check' phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-15 12:48:49 +02:00
Ricardo Wurmus 886986b744
gnu: Add python-ont-fast5-api.
* gnu/packages/bioinformatics.scm (python-ont-fast5-api): New variable.
2019-07-15 12:18:01 +02:00
Ricardo Wurmus d71d85cd17
gnu: Add python-progressbar33.
* gnu/packages/python-xyz.scm (python-progressbar33): New variable.
2019-07-15 12:18:01 +02:00
Efraim Flashner 64ed7c2258
gnu: rkflashtool: Update to 5.2-1.8966c4e.
* gnu/packages/flashing-tools.scm (rkflashtool): Update to 5.2-1.8966c4e.
[version]: Use 'git-version'.
[source]: Use 'git-file-name'.
2019-07-15 12:10:32 +03:00
Ludovic Courtès 9af75a2630
channels: Avoid use of 'derivation-input-path'.
* guix/channels.scm (old-style-guix?): Use 'derivation-name' rather than
'derivation-input-path'.
2019-07-15 10:01:05 +02:00
Ludovic Courtès b9373e2627
gexp: 'lowered-gexp-guile' now returns a <derivation-input>.
* guix/derivations.scm (derivation-input-output-path): New procedure.
* guix/gexp.scm (lower-gexp): Wrap GUILE in a <derivation-input>.
(gexp->derivation): Adjust accordingly.
* guix/remote.scm (remote-pipe-for-gexp, remote-eval): Adjust
accordingly.
* tests/gexp.scm ("lower-gexp"): Adjust accordingly.
2019-07-15 10:01:05 +02:00
Ludovic Courtès 93c2a00739
derivations: Deprecate the previous calling convention.
We will eventually require #:inputs to be a list of <derivation-input>;
store items will have to be passed as #:sources, already interned.

* guix/derivations.scm (warn-about-derivation-deprecation): New procedure.
(derivation): Add #:%deprecation-warning? parameter.
[warn-deprecation]: New macro.
[input->derivation-input, input->source]: Use it.
(build-expression->derivation): Pass #:%deprecation-warning?.
* po/guix/POTFILES.in: Add guix/derivations.scm.
2019-07-15 10:01:05 +02:00
Ludovic Courtès 9e64302d68
derivations: Update tests to use new calling convention.
* tests/derivations.scm ("build derivation with 1 source"): Adjust to
new 'derivation' calling convention.
("identical files are deduplicated"): Likewise.
("fixed-output-derivation?"): Likewise.
("fixed-output derivation"): Likewise.
("fixed-output derivation, recursive"): Likewise.
("derivation with a fixed-output input"): Likewise.
("multiple-output derivation"): Likewise.
("multiple-output derivation, non-alphabetic order"): Likewise.
("read-derivation vs. derivation"): Likewise.
("user of multiple-output derivation"): Likewise.
("derivation with #:references-graphs"): Likewise.
("derivation #:allowed-references, ok"): Likewise.
("derivation #:allowed-references, not allowed"): Likewise.
("derivation #:allowed-references, self allowed"): Likewise.
("derivation #:allowed-references, self not allowed"): Likewise.
("derivation #:disallowed-references, ok"): Likewise.
("derivation #:disallowed-references, not ok"): Likewise.
("derivation #:leaked-env-vars"): Likewise.
("build derivation with coreutils"): Likewise.
("map-derivation, sources"): Likewise.
("derivation with local file as input"): Remove.
2019-07-15 10:01:05 +02:00
Ludovic Courtès d145832151
derivations: 'map-derivation' uses the new 'derivation' calling convention.
* guix/derivations.scm (map-derivation)[input->output-paths]: Adjust to
deal with an argument that's either 'derivation-input?' or a string.
[rewritten-input]: Return a <derivation-input> or a string.
Pass #:inputs and #:sources to 'derivation'.
2019-07-15 10:01:05 +02:00
Ludovic Courtès 02237f13ee
download: Use the new 'derivation' calling convention.
* guix/download.scm (built-in-download): Pass MIRRORS and
CONTENT-ADDRESSED-MIRRORS as #:sources, not #:inputs.
2019-07-15 10:01:05 +02:00
Ludovic Courtès 266e54e2ac
gnu: guile-bootstrap: Use the new 'derivation' calling convention.
* gnu/packages/bootstrap.scm (raw-build): In 'derivation' call,
distinguish #:inputs from #:sources, passing a list of
<derivation-input> as #:inputs.
2019-07-15 10:01:05 +02:00
Ludovic Courtès 3868577480
gexp: <lowered-gexp> separates sources from derivation inputs.
* guix/gexp.scm (lower-inputs): Return either <derivation-input> records
or store items.
(lower-reference-graphs): Return file/input pairs.
(<lowered-gexp>)[sources]: New field.
(lower-gexp): Adjust accordingly.
(gexp->input-tuple): Remove.
(gexp->derivation)[graphs-file-names]: Handle only the
'derivation-input?' and 'string?' cases.
Pass #:sources to 'raw-derivation'; ensure #:inputs contains only
<derivation-input> records.
* guix/remote.scm (remote-eval): Adjust to the new <lowered-gexp>
interface.
* tests/gexp.scm ("lower-gexp"): Adjust to expect <derivation-input>
records instead of <gexp-input>
2019-07-15 10:01:05 +02:00
Ludovic Courtès 4daf89d619
derivations: 'derivation' primitive accepts <derivation> and #:sources.
This brings us closer to the <derivation> data type.

* guix/derivations.scm (derivation): Add #:sources parameter.
[input->derivation-input]: Add clause for 'derivation-input?'.
Honor SOURCES.
2019-07-15 10:01:04 +02:00
Ludovic Courtès 456c7ade09
syscalls: Use 'define-as-needed' for 'AT_' constants introduced in Guile 2.2.5.
* guix/build/syscalls.scm (AT_FDCWD, AT_SYMLINK_NOFOLLOW, AT_REMOVEDIR)
(AT_SYMLINK_FOLLOW, AT_NO_AUTOMOUNT, AT_EMPTY_PATH): Define using
'define-as-needed'.
2019-07-15 10:00:12 +02:00
Ludovic Courtès 38302bd939
compile: Report the name of the file that cannot be compiled.
Fixes <https://bugs.gnu.org/36640>.
Reported by Robert Vollmert <rob@vllmrt.net>.

* guix/build/compile.scm (call/exit-on-exception): Add 'file' parameter
and honor it.
(exit-on-exception): Likewise.
(compile-files): Pass FILE to 'exit-on-exception'.
2019-07-15 10:00:12 +02:00
Pierre Langlois 2f3c0fb39d
gnu: linux-libre: Fix build on aarch64.
* gnu/packages/linux.scm (make-linux-libre)[arguments]: Remove
'work-around-gcc-7-include-path-issue phase.
2019-07-14 15:04:41 -04:00
Mark H Weaver be7eebe26d
gnu: linux-libre: Update to 5.2.
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.2.
(%linux-libre-hash): Update hash.
* linux-libre-5.1: Rename to ...
* linux-libre-5.2: ... this.  Use %linux-libre-5.2-patches.
* linux-libre: Switch to linux-libre-5.2.
* linux-libre-arm-veyron, linux-libre-arm-generic, linux-libre-arm-omap2plus:
Use %linux-libre-5.2-patches.
* linux-libre-headers-5.1: Rename to ...
* linux-libre-headers-5.2: ... this.
* %linux-libre-5.1-patches: Rename to ...
* %linux-libre-5.2-patches: ... this.
* gnu/packages/aux-files/linux-libre/5.1-arm-veyron.conf,
gnu/packages/aux-files/linux-libre/5.1-arm.conf,
gnu/packages/aux-files/linux-libre/5.1-arm64.conf,
gnu/packages/aux-files/linux-libre/5.1-i686.conf,
gnu/packages/aux-files/linux-libre/5.1-x86_64.conf: Delete files.
* gnu/packages/aux-files/linux-libre/5.2-arm-veyron.conf,
gnu/packages/aux-files/linux-libre/5.2-arm.conf,
gnu/packages/aux-files/linux-libre/5.2-arm64.conf,
gnu/packages/aux-files/linux-libre/5.2-i686.conf,
gnu/packages/aux-files/linux-libre/5.2-x86_64.conf: New files.
* Makefile.am (AUX_FILES): Update accordingly.
2019-07-14 15:02:45 -04:00
Julien Lepiller a4bb189210
Revert "guix: node-build-system: Use guile-json instead of a custom parser."
The effect of this change was to import the (json parser) from the host
side into the build side. The solution here would be to do the equivalent
of ‘with-extensions’ for gexps. Since we don't use gexps for build
systems just yet, revert this for now.

This reverts commit 8eb0ba532e.
2019-07-14 20:18:07 +02:00
Arun Isaac 3c6d7fa842
gnu: Add emacs-elpher.
* gnu/packages/emacs-xyz.scm (emacs-elpher): New variable.
2019-07-14 20:14:35 +05:30
Rutger Helling 39a20acc06
gnu: nzbget: Update to 21.0.
* gnu/packages/networking.scm (nzbget): Update to 21.0.
2019-07-14 15:55:47 +02:00
Julien Lepiller 8eb0ba532e
guix: node-build-system: Use guile-json instead of a custom parser.
* guix/build/json.scm: Remove file.
* Makefile.am: Remove it.
* guix/build/node-build-system.scm: Use (json parser) instead of (guix build json).
* guix/build-system/node.scm: Idem.
2019-07-14 14:57:46 +02:00
Jelle Licht 09a1f92f61
build: Add node-build-system.
* guix/build/node-build-system.scm: New file.
* guix/build-system/node.scm: New file.
* guix/build/json.scm: New file.
* doc/guix.texi: Document it.
* Makefile.am: Added new files.

Co-Authored-By: Julien Lepiller <julien@lepiller.eu>
2019-07-14 12:20:48 +02:00
Efraim Flashner 041e03847b
gnu: Add evisum.
* gnu/packages/enlightenment.scm (evisum): New variable.
2019-07-14 11:02:23 +03:00
Jan Nieuwenhuizen 53f2164272
channels: Add optional directory to channel metadata.
* guix/channels.scm (<channel-metadata>): Add directory slot.  Update users.
(read-channel-metadata-from-source): New function.
(standard-module-derivation): Use it.
* doc/guix.texi (Package Modules in a Subdirectory): New subsection.
2019-07-14 00:58:09 +02:00
Christopher Baines bee9f97e0a
gnu: Add s-tui.
* gnu/packages/admin.scm (s-tui): New variable.
2019-07-13 23:18:54 +01:00
Ricardo Wurmus 29fe71152f
gnu: python-rpy2: Update to 3.0.4-1.19868a8.
* gnu/packages/statistics.scm (python-rpy2): Update to 3.0.4-1.19868a8.
[source]: Fetch from repository.
[propagated-inputs]: Add python-cffi, python-numpy, python-pandas,
python-ipython, and python-tzlocal.
[native-inputs]: Add python-pytest.
[arguments]: Set TZ variable and use pytest to run the tests.
2019-07-13 23:50:01 +02:00
Leo Famulari 06e1ecbf17
doc: Update keyserver URL.
* HACKING (Commit Access): Change keyserver URL to 'keys.openpgp.org'.
2019-07-13 14:25:19 -04:00
Hartmut Goebel 6b61dea336
gnu: Add pngquant.
* gnu/packages/image.scm (pngquant): New variable.
2019-07-13 20:04:44 +02:00
Hartmut Goebel 8db1bd188b
gnu: Add libimagequant.
* gnu/packages/image.scm (libimagequant): New variable.
2019-07-13 20:04:44 +02:00
Jacob MacDonald f24276de9a
gnu: docker-compose: Update to 1.24.1.
* gnu/packages/docker.scm (docker-compose): Update to 1.24.1.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-13 15:13:53 +02:00
Jacob MacDonald 3146b6da6d
gnu: python-docker-py: Update to 3.7.3.
* gnu/packages/docker.scm (python-docker-py): Update to 3.7.3.
[inputs]: Use PYTHON-REQUESTS-2.20 instead of PYTHON-REQUESTS.
Add PYTHON-DOCKER-PYCREDS, PYTHON-IPADDRESS, PYTHON-PARAMIKO, and
PYTHON-URLLIB3-1.24.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2019-07-13 15:13:53 +02:00
Jacob MacDonald 8bb591d426
gnu: python-dockerpty: Update to 0.4.1.
* gnu/packages/docker.scm (python-dockerpty): Update to 0.4.1.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-13 15:13:53 +02:00
Jacob MacDonald d59d56b2ad
gnu: python-docker-pycreds: Update to 0.4.0.
* gnu/packages/docker.scm (python-docker-pycreds): Update to 0.4.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-13 15:13:53 +02:00
Jacob MacDonald 52cc489292
gnu: python-texttable: Update to 0.9.1.
* gnu/packages/python-xyz.scm (python-texttable): Update to 0.9.1.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-13 15:13:53 +02:00
Jacob MacDonald 97f0bd7d68
gnu: Add python-requests-2.20.
* gnu/packages/python-web.scm (python-requests-2.20): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-13 15:13:53 +02:00
Jacob MacDonald a76e6a690f
gnu: Add python-idna-2.7.
* gnu/packages/python-xyz.scm (python-idna-2.7): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-13 15:13:53 +02:00
Jacob MacDonald 7deb086864
gnu: Add python-urllib3-1.24.
* gnu/packages/python-web.scm (python-urllib3-1.24): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-13 15:13:52 +02:00
Jacob MacDonald e308b4f06a
gnu: Add python-cached-property.
* gnu/packages/python-xyz.scm (python-cached-property): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-13 15:13:52 +02:00
Ludovic Courtès 86b0b7917f
gnu: rush: Update to 2.1.
* gnu/packages/rush.scm (rush): Update to 2.1.
2019-07-13 15:13:52 +02:00
Ricardo Wurmus c1b87329bf
gnu: pigx-rnaseq: Update to 0.0.10.
* gnu/packages/bioinformatics.scm (pigx-rnaseq): Update to 0.0.10.
2019-07-13 13:51:52 +02:00
Tobias Geerinckx-Rice 2a059ab995
doc: Increase VM memory size.
* doc/guix.texi (Running Guix in a VM): Bump ‘-m‘ to 1 GiB to match its
@item below, and have a chance of being usable, too.
2019-07-13 05:26:01 +02:00
Tobias Geerinckx-Rice ffae5a7946
doc: Update gpg key fetching instructions.
This mirrors the steps performed by etc/guix-install.sh.

* doc/guix.texi (KEY-SERVER): Replace moribund SKS key servers with...
(OPENPGP-SIGNING-KEY-URL): ...the TLS PKI of the future.
(Binary Installation, USB Stick and DVD Installation): Update the
@example gpg command to download the key directly from Savannah.
2019-07-13 04:55:46 +02:00
Tobias Geerinckx-Rice 2516ba81be
gnu: wcslib: Update to 6.2.
* gnu/packages/astronomy.scm (wcslib): Update to 6.2.
[arguments]: Add #:configure-flags to find CFITSIO.
2019-07-13 00:20:21 +02:00
Tobias Geerinckx-Rice 7fc2d3a92d
gnu: wcslib: Don't use NAME in source URI.
* gnu/packages/astronomy.scm (wcslib)[source]: Hard-code NAME.
2019-07-13 00:20:21 +02:00
Arne Babenhauserheide 17f90b679f
gnu: guile-wisp: fix url
* gnu/packages/guile-xyz.scm (guile-wisp): add www to url (required due to hoster-changes)

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-12 23:54:19 +02:00
Arne Babenhauserheide 65610f7326
gnu: wisp: update to 1.0.2.
* gnu/packages/guile-xyz (wisp): update to version 1.0.2.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-12 23:54:19 +02:00