Ricardo Wurmus
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e640da33f3
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Merge branch 'wip-r'
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2022-05-29 11:49:03 +02:00 |
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Ricardo Wurmus
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89e9262012
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gnu: r-bsgenome-hsapiens-ucsc-hg19-masked: Update to 1.3.993.
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ucsc-hg19-masked): Update to 1.3.993.
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2022-05-29 11:44:09 +02:00 |
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Mădălin Ionel Patrașcu
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a5f4c03df1
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gnu: Add r-scmap.
* gnu/packages/bioconductor.scm (r-scmap): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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2022-05-29 00:43:05 +02:00 |
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Ricardo Wurmus
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66bfe55848
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gnu: Add r-msdata.
* gnu/packages/bioconductor.scm (r-msdata): New variable.
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2022-05-28 23:19:48 +02:00 |
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Ricardo Wurmus
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79158a5624
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gnu: r-tcgabiolinksgui-data: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-tcgabiolinksgui-data): Update to 1.16.0.
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2022-05-28 23:19:48 +02:00 |
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Ricardo Wurmus
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9d538de266
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gnu: r-curatedtcgadata: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-curatedtcgadata): Update to 1.18.0.
[native-inputs]: Add r-knitr.
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2022-05-28 23:19:47 +02:00 |
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Ricardo Wurmus
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1c4d0fc9a9
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gnu: r-gagedata: Update to 2.34.0.
* gnu/packages/bioconductor.scm (r-gagedata): Update to 2.34.0.
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2022-05-28 23:19:47 +02:00 |
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Ricardo Wurmus
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c56b553e97
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gnu: r-affydata: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-affydata): Update to 1.44.0.
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2022-05-28 23:19:47 +02:00 |
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Ricardo Wurmus
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e06ee7a745
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gnu: r-all: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-all): Update to 1.38.0.
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2022-05-28 23:19:47 +02:00 |
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Ricardo Wurmus
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15e10974ef
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gnu: r-hsmmsinglecell: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-hsmmsinglecell): Update to 1.16.0.
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2022-05-28 23:19:47 +02:00 |
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Ricardo Wurmus
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3ff4e48e85
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gnu: r-pasilla: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-pasilla): Update to 1.24.0.
[propagated-inputs]: Remove r-biocstyle, r-knitr, and r-rmarkdown.
[native-inputs]: Add r-knitr.
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2022-05-28 23:19:47 +02:00 |
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Ricardo Wurmus
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4f2ac5f19f
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gnu: r-genomationdata: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-genomationdata): Update to 1.28.0.
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2022-05-28 23:19:47 +02:00 |
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Ricardo Wurmus
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d24b0702b6
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gnu: r-genelendatabase: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-genelendatabase): Update to 1.32.0.
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2022-05-28 23:19:47 +02:00 |
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Ricardo Wurmus
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7a58c9af46
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gnu: r-copyhelper: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-copyhelper): Update to 1.28.0.
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2022-05-28 23:19:47 +02:00 |
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Ricardo Wurmus
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e437cf10a4
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gnu: r-chromstardata: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-chromstardata): Update to 1.22.0.
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2022-05-28 23:19:47 +02:00 |
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Ricardo Wurmus
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1413f9f214
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gnu: r-celldex: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-celldex): Update to 1.6.0.
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2022-05-28 23:19:46 +02:00 |
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Ricardo Wurmus
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3ce819d563
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gnu: r-biscuiteerdata: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-biscuiteerdata): Update to 1.10.0.
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2022-05-28 23:19:46 +02:00 |
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Ricardo Wurmus
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ccb66a16a0
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gnu: r-arrmdata: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-arrmdata): Update to 1.32.0.
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2022-05-28 23:19:46 +02:00 |
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Ricardo Wurmus
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9db43e4979
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gnu: r-aneufinderdata: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-aneufinderdata): Update to 1.24.0.
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2022-05-28 23:19:46 +02:00 |
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Ricardo Wurmus
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c89eb68ede
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gnu: r-adductdata: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-adductdata): Update to 1.12.0.
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2022-05-28 23:19:46 +02:00 |
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Ricardo Wurmus
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7feae8098c
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gnu: r-pfam-db: Update to 3.15.0.
* gnu/packages/bioconductor.scm (r-pfam-db): Update to 3.15.0.
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2022-05-28 23:19:46 +02:00 |
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Ricardo Wurmus
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5efae7b049
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gnu: r-txdb-hsapiens-ucsc-hg38-knowngene: Update to 3.15.0.
* gnu/packages/bioconductor.scm (r-txdb-hsapiens-ucsc-hg38-knowngene): Update to 3.15.0.
[propagated-inputs]: Add r-annotationdbi.
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2022-05-28 23:19:46 +02:00 |
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Ricardo Wurmus
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8ee1246a38
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gnu: r-bsgenome-hsapiens-ucsc-hg38: Update to 1.4.4.
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ucsc-hg38): Update to 1.4.4.
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2022-05-28 23:19:46 +02:00 |
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Ricardo Wurmus
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3d93251ea5
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gnu: r-bsgenome-hsapiens-ucsc-hg19: Update to 1.4.3.
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ucsc-hg19): Update to 1.4.3.
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2022-05-28 23:19:46 +02:00 |
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Ricardo Wurmus
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549a9e6f6a
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gnu: r-leidenbase: Update to 0.1.9.
* gnu/packages/bioconductor.scm (r-leidenbase): Update to 0.1.9.
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2022-05-28 23:19:46 +02:00 |
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Ricardo Wurmus
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319fa58dac
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gnu: r-phyloseq: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-phyloseq): Update to 1.40.0.
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2022-05-28 23:19:45 +02:00 |
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Ricardo Wurmus
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e0be852a1e
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gnu: r-tximeta: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.14.0.
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2022-05-28 23:19:45 +02:00 |
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Ricardo Wurmus
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e290d834d9
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gnu: r-tricycle: Update to 1.4.0.
* gnu/packages/bioconductor.scm (r-tricycle): Update to 1.4.0.
[propagated-inputs]: Add r-ggnewscale.
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2022-05-28 23:19:45 +02:00 |
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Ricardo Wurmus
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5ec7143f69
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gnu: r-tcgabiolinks: Update to 2.24.1.
* gnu/packages/bioconductor.scm (r-tcgabiolinks): Update to 2.24.1.
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2022-05-28 23:19:45 +02:00 |
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Ricardo Wurmus
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a4f03b0a55
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gnu: r-biscuiteer: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-biscuiteer): Update to 1.10.0.
[propagated-inputs]: Add r-iranges.
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2022-05-28 23:19:45 +02:00 |
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Ricardo Wurmus
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6f31f4618a
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gnu: r-omnipathr: Update to 3.4.0.
* gnu/packages/bioconductor.scm (r-omnipathr): Update to 3.4.0.
[propagated-inputs]: Add r-withr.
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2022-05-28 23:19:45 +02:00 |
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Ricardo Wurmus
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b1c215755a
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gnu: r-dmrseq: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-dmrseq): Update to 1.16.0.
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2022-05-28 23:19:45 +02:00 |
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Ricardo Wurmus
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4ab8327ba4
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gnu: r-bsseq: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-bsseq): Update to 1.32.0.
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2022-05-28 23:19:45 +02:00 |
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Ricardo Wurmus
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397bdc4329
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gnu: r-biotmle: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-biotmle): Update to 1.20.0.
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2022-05-28 23:19:45 +02:00 |
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Ricardo Wurmus
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4b3f9a16f2
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gnu: r-biotip: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-biotip): Update to 1.10.0.
[propagated-inputs]: Remove r-hmisc; add r-scran.
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2022-05-28 23:19:45 +02:00 |
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Ricardo Wurmus
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e8e3d333f0
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gnu: r-bioqc: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-bioqc): Update to 1.24.0.
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2022-05-28 23:19:44 +02:00 |
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Ricardo Wurmus
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dba6a33e3d
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gnu: r-bionetstat: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-bionetstat): Update to 1.16.0.
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2022-05-28 23:19:44 +02:00 |
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Ricardo Wurmus
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8fe9bcf0a4
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gnu: r-bionet: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-bionet): Update to 1.56.0.
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2022-05-28 23:19:44 +02:00 |
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Ricardo Wurmus
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f5262fa4ed
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gnu: r-bionero: Update to 1.4.0.
* gnu/packages/bioconductor.scm (r-bionero): Update to 1.4.0.
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2022-05-28 23:19:44 +02:00 |
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Ricardo Wurmus
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3391ff6ddb
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gnu: r-biomvrcns: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-biomvrcns): Update to 1.36.0.
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2022-05-28 23:19:44 +02:00 |
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Ricardo Wurmus
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7fe83026b7
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gnu: r-biomvcclass: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-biomvcclass): Update to 1.64.0.
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2022-05-28 23:19:44 +02:00 |
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Ricardo Wurmus
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a3a8109fe8
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gnu: r-mvcclass: Update to 1.70.0.
* gnu/packages/bioconductor.scm (r-mvcclass): Update to 1.70.0.
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2022-05-28 23:19:44 +02:00 |
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Ricardo Wurmus
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eb18527e5f
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gnu: r-biomformat: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-biomformat): Update to 1.24.0.
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2022-05-28 23:19:44 +02:00 |
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Ricardo Wurmus
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12ee563b41
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gnu: r-biodb: Update to 1.4.0.
* gnu/packages/bioconductor.scm (r-biodb): Update to 1.4.0.
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2022-05-28 23:19:44 +02:00 |
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Ricardo Wurmus
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259c003f02
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gnu: r-biocdockermanager: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-biocdockermanager): Update to 1.8.0.
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2022-05-28 23:19:43 +02:00 |
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Ricardo Wurmus
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6766fbb003
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gnu: r-biocthis: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-biocthis): Update to 1.6.0.
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2022-05-28 23:19:43 +02:00 |
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Ricardo Wurmus
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b007802e4b
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gnu: r-basilisk: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-basilisk): Update to 1.8.0.
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2022-05-28 23:19:43 +02:00 |
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Ricardo Wurmus
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90e56ba6e3
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gnu: r-basilisk-utils: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-basilisk-utils): Update to 1.8.0.
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2022-05-28 23:19:43 +02:00 |
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Ricardo Wurmus
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5d2c07021c
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gnu: r-dir-expiry: Update to 1.4.0.
* gnu/packages/bioconductor.scm (r-dir-expiry): Update to 1.4.0.
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2022-05-28 23:19:43 +02:00 |
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Ricardo Wurmus
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3c65a7d577
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gnu: r-genetclassifier: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-genetclassifier): Update to 1.36.0.
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2022-05-28 23:19:43 +02:00 |
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