79e09ef2fd
gnu: gettext: Update to 0.19.5.
...
* gnu/packages/patches/gettext-msgunfmt.patch: Remove file.
* gnu-system.am (dist_patch_DATA): Remove it.
* gnu/packages/gettext.scm (gnu-gettext): Update to 0.19.5. Remove patch.
2015-07-10 23:47:07 -04:00
c2ba49ef8e
gnu: coreutils: Update to 8.24.
...
* gnu/packages/patches/coreutils-dummy-man.patch: Remove file.
* gnu-system.am (dist_patch_DATA): Remove it.
* gnu/packages/base.scm (coreutils): Update to 8.24. Remove patch.
2015-07-10 23:47:07 -04:00
c1f6a0c2ed
gnu: build: Add Linux container module.
...
* gnu/build/linux-container.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
* .dir-locals.el: Add Scheme indent rules for 'call-with-container', and
'container-excursion'.
* tests/containers.scm: New file.
* Makefile.am (SCM_TESTS): Add it.
2015-07-09 08:23:03 -04:00
9fb00f383d
gnu: wpa-supplicant: Fix WPS and P2P NFC NDEF record payload length validation.
...
* gnu/packages/patches/wpa-supplicant-2015-5-fix.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/admin.scm (wpa-supplicant-light)[source]: Add patch.
2015-07-08 18:27:37 -04:00
56e373ef75
gnu: Add preseq.
...
* gnu/packages/bioinformatics.scm (preseq): New variable.
* gnu/packages/patches/preseq-1.0.2-install-to-PREFIX.patch: New file.
* gnu/packages/patches/preseq-1.0.2-link-with-libbam.patch: New file.
* gnu-system.am (dist_patch_DATA): Add them.
2015-07-08 17:05:00 +02:00
23da88f61e
gnu: liba52: Build shared library.
...
* gnu/packages/patches/liba52-enable-pic.patch,
gnu/packages/patches/liba52-link-with-libm.patch,
gnu/packages/patches/liba52-set-soname.patch,
gnu/packages/patches/liba52-use-mtune-not-mcpu.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/video.scm (liba52)[source]: Add patches.
[native-inputs]: Add autoconf, automake, and libtool.
[arguments]: Add "--enable-shared" to configure-flags.
Add 'bootstrap' phase.
2015-07-07 10:52:04 -04:00
c803ffcb3a
gnu: icecat: Fix build against libvpx 1.4.
...
* gnu/packages/patches/icecat-libvpx-1.4.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/gnuzilla.scm (icecat)[source]: Add patch.
2015-07-06 23:01:56 -04:00
723e886656
gnu: libvpx: Update to 1.4.0.
...
* gnu/packages/patches/libvpx-fix-armhf-link.patch,
gnu/packages/patches/libvpx-fix-ssse3-quantize.patch,
gnu/packages/patches/libvpx-vp9-out-of-bounds-access.patch: Remove files.
* gnu-system.am (dist_patch_DATA): Remove them.
* gnu/packages/video.scm (libvpx): Update to 1.4.0. Remove patches. Update
source URI.
2015-07-06 21:17:05 -04:00
9ed5486439
gnu: libwmf: Fix CVE-2006-3376, CVE-2009-1364, CVE-2015-{0848,4588,4695,4696}.
...
* gnu/packages/patches/libwmf-CVE-2006-3376.patch,
gnu/packages/patches/libwmf-CVE-2009-1364.patch,
gnu/packages/patches/libwmf-CVE-2015-0848+4588+4695+4696.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/image.scm (libwmf)[source]: Add patches.
2015-07-06 20:04:50 -04:00
cc2b77dfc7
gnu: Move content of openssl module into tls module.
...
* gnu/packages/openssl.scm (openssl, perl-net-ssleay): Move to...
* gnu/packages/tls.scm: ...here.
* gnu/packages/openssl.scm: Delete file.
* gnu-system.am (GNU_SYSTEM_MODULES): Unregister deleted file.
* gnu/packages/{admin.scm, bittorrent.scm, certs.scm, ci.scm,
cyrus-sasl.scm, databases.scm, dns.scm, ebook.scm, enlightenment.scm,
gnunet.scm, libreoffice.scm, links.scm, mail.scm, messaging.scm,
networking.scm, ntp.scm, openldap.scm, package-management.scm, pdf.scm,
python.scm, qt.scm, rdesktop.scm, rdf.scm, ruby.scm, ssh.scm,
synergy.scm, tor.scm, version-control.scm, video.scm, vpn.scm,
w3m.scm, web.scm, weechat.scm, xiph.scm}: Adapt module import.
2015-07-05 18:27:24 +02:00
a7fd7b68a6
gnu: Rename module gnutls to tls.
...
* gnu/packages/gnutls.scm: Rename to...
* gnu/packages/tls.scm: ... this. Change module name accordingly.
* gnu/packages/{admin.scm, cups.scm, curl.scm, dc.scm, dns.scm, emacs.scm,
ftp.scm, gnome.scm, gnunet.scm, gnupg.scm, gsasl.scm, lynx.scm,
mail.scm, messaging.scm, package-management.scm, shishi.scm,
task-management.scm, version-control.scm, video.scm, vpn.scm,
webkit.scm, weechat.scm, wget.scm, wine.scm, xml.scm}: Adapt module
import to new name.
* gnu-system.am (GNU_SYSTEM_MODULES): Rename gnutls module to tls.
2015-07-05 17:09:42 +02:00
4463c0d216
gnu: icecat: Fix CVE-2015-{2722,2724,2728,2733,2735,2736,2738,2739,2740,2743}.
...
* gnu/packages/patches/icecat-CVE-2015-2722-pt1.patch,
gnu/packages/patches/icecat-CVE-2015-2722-pt2.patch,
gnu/packages/patches/icecat-CVE-2015-2724-pt1.patch,
gnu/packages/patches/icecat-CVE-2015-2724-pt2.patch,
gnu/packages/patches/icecat-CVE-2015-2724-pt3.patch,
gnu/packages/patches/icecat-CVE-2015-2724-pt4.patch,
gnu/packages/patches/icecat-CVE-2015-2728-pt1.patch,
gnu/packages/patches/icecat-CVE-2015-2728-pt2.patch,
gnu/packages/patches/icecat-CVE-2015-2733-pt1.patch,
gnu/packages/patches/icecat-CVE-2015-2733-pt2.patch,
gnu/packages/patches/icecat-CVE-2015-2735.patch,
gnu/packages/patches/icecat-CVE-2015-2736.patch,
gnu/packages/patches/icecat-CVE-2015-2738.patch,
gnu/packages/patches/icecat-CVE-2015-2739.patch,
gnu/packages/patches/icecat-CVE-2015-2740.patch,
gnu/packages/patches/icecat-CVE-2015-2743.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/gnuzilla.scm (icecat)[source]: Add patches.
2015-07-04 05:44:10 -04:00
b5b08878b6
gnu: mutt: Don't retain reference to GCC.
...
* gnu/packages/patches/mutt-store-references.patch: New file.
* gnu/packages/mail.scm (mutt)[source]: Use it.
* gnu-system.am (dist_patch_DATA): Add it.
2015-07-03 15:28:06 +02:00
a17d45641b
gnu: Add deal.II.
...
* gnu/packages/maths.scm (dealii, dealii-openmpi): New variables.
* gnu/packages/patches/dealii-p4est-interface.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.
2015-06-29 15:34:36 -05:00
9a899cceab
gnu: petsc: Upgrade to 3.6.0.
...
* gnu/packages/maths.scm (petsc): Upgrade to 3.6.0.
* gnu/packages/patches/petsc-fix-threadcomm.patch: Delete patch.
* gnu-system.am (dist_patch_DATA): Remove it.
2015-06-29 15:34:36 -05:00
cec86422b7
gnu: Add MUMPS.
...
* gnu/packages/maths.scm (mumps, mumps-metis, mumps-openmpi)
(mumps-metis-openmpi): New variables.
* gnu/packages/patches/mumps-build-parallelism.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.
2015-06-29 15:34:36 -05:00
6c7985408f
gnu: Update scotch to 6.0.4.
...
* gnu/packages/maths.scm (scotch): Update to 6.0.4.
[arguments]: Add -fPIC to CFLAGS.
* gnu/packages/patches/scotch-test-threading.patch: Adjust patch for a
new set of test fixes.
* gnu/packages/patches/pt-scotch-build-parallelism.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.
2015-06-29 15:34:36 -05:00
ce7d9c989d
gnu: hwloc: Upgrade to 1.10.1.
...
* gnu/packages/patches/hwloc-gather-topology-lstopo.patch: New patch.
* gnu/packages/mpi.scm (hwloc): Upgrade to 1.10.1.
[source]: Use patch.
[propagated-inputs]: Remove libpci.
[inputs]: Add libpciaccess.
* gnu-system.am (dist_patch_DATA): Add patch.
2015-06-29 15:34:36 -05:00
74e03fccd3
gnu: r: Update to 3.2.1.
...
* gnu/packages/statistics.scm (r): Update to 3.2.1.
* gnu/packages/patches/r-fix-15899.patch: Remove file.
* gnu-system.am (dist_patch_DATA): Remove it.
2015-06-29 16:13:28 +02:00
60def646bb
gnu: Add pv.
...
* gnu/package/pv.scm (pv): New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
Signed-off-by: Alex Kost <alezost@gmail.com>
2015-06-27 17:27:49 +03:00
bf76d98789
Merge branch 'master' into core-updates
2015-06-21 14:30:22 -04:00
180a93c72a
gnu: gsl: Fix poly test on i686.
...
* gnu/packages/patches/gsl-poly-test-fix-pt1.patch,
gnu/packages/patches/gsl-poly-test-fix-pt2.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/maths.scm (gsl)[source]: Add patches.
2015-06-20 01:38:56 -04:00
9a6953d28a
gnu: mdadm: Add compilation fix for gcc-4.9.
...
* gnu/packages/patches/mdadm-gcc-4.9-fix.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/linux.scm (mdadm): Add patch.
2015-06-19 22:42:12 -04:00
fd6ae1b983
gnu: clang: Allow 'clang' to link executables.
...
* gnu/packages/patches/clang-libc-search-path.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/llvm.scm (clang-from-llvm)[source]: Use it.
[inputs]: Add "gcc-lib".
[arguments]. Add -DGCC_INSTALL_PREFIX and -DC_INCLUDE_DIRS to
#:configure-flags. Add #:phases argument.
2015-06-19 17:23:48 +02:00
9ae1e92071
gnu: cpio: Fix symlink-bad-length test.
...
* gnu/packages/patches/cpio-fix-symlink-bad-length-test.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/cpio.scm (cpio): Add patch.
2015-06-17 23:19:02 -04:00
8e28d22c91
gnu: libtiff: Add fixes for several CVEs.
...
* gnu/packages/patches/libtiff-CVE-2012-4564.patch,
gnu/packages/patches/libtiff-CVE-2013-1960.patch,
gnu/packages/patches/libtiff-CVE-2013-1961.patch,
gnu/packages/patches/libtiff-CVE-2013-4231.patch,
gnu/packages/patches/libtiff-CVE-2013-4232.patch,
gnu/packages/patches/libtiff-CVE-2013-4243.patch,
gnu/packages/patches/libtiff-CVE-2013-4244.patch,
gnu/packages/patches/libtiff-CVE-2014-8127-pt1.patch,
gnu/packages/patches/libtiff-CVE-2014-8127-pt2.patch,
gnu/packages/patches/libtiff-CVE-2014-8127-pt3.patch,
gnu/packages/patches/libtiff-CVE-2014-8127-pt4.patch,
gnu/packages/patches/libtiff-CVE-2014-8128-pt1.patch,
gnu/packages/patches/libtiff-CVE-2014-8128-pt2.patch,
gnu/packages/patches/libtiff-CVE-2014-8128-pt3.patch,
gnu/packages/patches/libtiff-CVE-2014-8128-pt4.patch,
gnu/packages/patches/libtiff-CVE-2014-8128-pt5.patch,
gnu/packages/patches/libtiff-CVE-2014-8129.patch,
gnu/packages/patches/libtiff-CVE-2014-9330.patch,
gnu/packages/patches/libtiff-CVE-2014-9655.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/image.scm (libtiff)[source]: Add patches.
2015-06-16 01:02:01 -04:00
7d02724b7b
Merge branch 'master' into core-updates
2015-06-16 01:01:54 -04:00
fef3cfaaab
gnu: qemu: Add fixes for CVE-2015-{4037,4103,4104,4105,4106}.
...
* gnu/packages/patches/qemu-CVE-2015-4037.patch,
gnu/packages/patches/qemu-CVE-2015-4103.patch,
gnu/packages/patches/qemu-CVE-2015-4104.patch,
gnu/packages/patches/qemu-CVE-2015-4105.patch,
gnu/packages/patches/qemu-CVE-2015-4106-pt1.patch,
gnu/packages/patches/qemu-CVE-2015-4106-pt2.patch,
gnu/packages/patches/qemu-CVE-2015-4106-pt3.patch,
gnu/packages/patches/qemu-CVE-2015-4106-pt4.patch,
gnu/packages/patches/qemu-CVE-2015-4106-pt5.patch,
gnu/packages/patches/qemu-CVE-2015-4106-pt6.patch,
gnu/packages/patches/qemu-CVE-2015-4106-pt7.patch,
gnu/packages/patches/qemu-CVE-2015-4106-pt8.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/qemu.scm (qemu-headless)[source]: Add patches.
2015-06-16 00:29:28 -04:00
d3b4c1358c
gnu: tar: Skip tests that rely on undefined unlinkat(2) behavior.
...
Fixes <http://bugs.gnu.org/20597 >.
Reported by Andrew Patterson <ajpatter@uwaterloo.ca>.
* gnu/packages/patches/tar-skip-unreliable-tests.patch: New file.
* gnu/packages/base.scm (tar)[source](patches): Add it.
* gnu-system.am (dist_patch_DATA): Add it.
2015-06-16 00:27:27 +02:00
25cc3fe703
gnu: gettext: Fix non-deterministic msgunfmt behavior.
...
Suggested by Alírio Eyng <alirioeyng@gmail.com>.
* gnu/packages/patches/gettext-msgunfmt.patch: New file.
* gnu/packages/gettext.scm (gnu-gettext)[source]: Use it.
* gnu-system.am (dist_patch_DATA): Add it.
2015-06-15 23:34:01 +02:00
975b8942a6
gnu: Rename (gnu packages dwm) to (gnu packages suckless).
...
* gnu/packages/dwm.scm: Rename this ...
* gnu/packages/suckless.scm: ... to this.
* gnu-system.am (GNU_SYSTEM_MODULES): Change dwm.scm to suckless.scm.
2015-06-15 17:25:41 -04:00
bcf2971f6e
Merge branch 'master' into core-updates
...
Conflicts:
gnu/packages/commencement.scm
gnu/packages/xml.scm
2015-06-14 08:49:42 -04:00
0ad8f76f7f
gnu: perl-net-ssleay: Disable test that fails with openssl-1.0.2b.
...
* gnu/packages/patches/perl-net-ssleay-disable-ede-test.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/openssl.scm (perl-net-ssleay): Add patch.
2015-06-13 23:01:07 -04:00
4c50e5ab3a
gnu: python: Disable ssl test that fails with openssl-1.0.2b.
...
* gnu/packages/patches/python-disable-ssl-test.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python): Add patch.
2015-06-13 23:01:07 -04:00
0061079a19
gnu: Add hydra.
...
* gnu/packages/ci.scm: New file.
* gnu/packages/patches/hydra-automake-1.15.patch,
gnu/packages/patches/hydra-disable-darcs-test.patch: New files.
* gnu-system.am (GNU_SYSTEM_MODULES): Add file.
(dist_patch_DATA): Add patches.
2015-06-13 08:05:01 -05:00
16cae799db
gnu: patch: Set PATH_MAX for Hurd systems.
...
* gnu/packages/patches/patch-hurd-path-max.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
2015-06-12 15:46:25 +03:00
741115b649
gnu: Add libsvm.
...
* gnu/packages/machine-learning.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
2015-06-12 12:57:30 +02:00
1492801655
Merge branch 'master' into core-updates
2015-06-10 17:50:27 -04:00
3dbb0e5f8b
gnu: qemu: Add fix for CVE-2015-3209.
...
* gnu/packages/patches/qemu-CVE-2015-3209.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/qemu.scm (qemu): Add patch.
2015-06-10 15:42:16 -04:00
56eba3d152
gnu: sed: Set PATH_MAX for Hurd systems.
...
* gnu/packages/patches/sed-hurd-path-max.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
2015-06-08 22:26:28 +03:00
716e20a2bc
gnu: icecat: Update to 31.7.0-gnu1.
...
* gnu/packages/patches/icecat-CVE-2015-0797.patch,
gnu/packages/patches/icecat-CVE-2015-2708-pt1.patch,
gnu/packages/patches/icecat-CVE-2015-2708-pt2.patch,
gnu/packages/patches/icecat-CVE-2015-2708-pt3.patch,
gnu/packages/patches/icecat-CVE-2015-2708-pt4.patch,
gnu/packages/patches/icecat-CVE-2015-2710-pt1.patch,
gnu/packages/patches/icecat-CVE-2015-2710-pt2.patch,
gnu/packages/patches/icecat-CVE-2015-2710-pt3.patch,
gnu/packages/patches/icecat-CVE-2015-2713-pt1.patch,
gnu/packages/patches/icecat-CVE-2015-2713-pt2.patch,
gnu/packages/patches/icecat-CVE-2015-2716.patch: Remove files.
* gnu-system.am (dist_patch_DATA): Remove them.
* gnu/packages/gnuzilla.scm (icecat): Update to 31.7.0-gnu1. Remove patches.
2015-06-06 08:02:45 -04:00
67dfa1986d
gnu: findutils: Use /var as the localstatedir, for 'updatedb'.
...
* gnu/packages/patches/findutils-localstatedir.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/base.scm (findutils)[source]: Use it.
[arguments]: Pass --localstatedir=/var.
2015-06-04 12:49:43 +02:00
e7e8ea069e
gnu: webkitgtk-2.4: Update to 2.8.9, build with gtk3.
...
* gnu/packages/webkit.scm (webkitgtk-2.4): Update to 2.8.9, build with gtk3.
Move flex and which to 'native-inputs'. Remove #:configure-flags.
(webkitgtk/gtk+-2): New variable.
* gnu/packages/gnucash.scm (gnucash): Use webkitgtk/gtk+-2.
* gnu/packages/patches/webkitgtk-2.4.8-gmutexlocker.patch: Remove file.
* gnu-system.am (dist_patch_DATA): Remove it.
Co-authored-by: Feng Shu <tumashu@163.com>
2015-05-29 16:05:49 +08:00
77af7b2407
gnu: maxima: Update to 5.36.1.
...
* gnu/packages/patches/maxima-defsystem-mkdir.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/maths.scm (maxima): Update to 5.36.1. Add patch.
2015-05-26 10:23:38 -04:00
94d915d0b0
gnu: base: Fix a bug that occurs in non-Linux systems.
...
* gnu/packages/base.scm (tar): Apply patch.
* gnu/packages/patches/tar-d_ino_in_dirent-fix.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
2015-05-23 22:24:25 +03:00
936715c9f4
gnu: gnutls: Update to 3.4.1.
...
* gnu/packages/patches/gnutls-fix-duplicate-manpages.patch: Remove file.
* gnu-system.am (dist_patch_DATA): Remove it.
* gnu/packages/gnutls.scm (gnutls): Update to 3.4.1. Remove patch.
2015-05-22 23:00:30 -04:00
4de02f36ac
gnu: fuse: Add fix for CVE-2015-3202.
...
* gnu/packages/patches/fuse-CVE-2015-3202.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/linux.scm (fuse): Add patch.
2015-05-22 00:10:43 -04:00
9099e88182
gnu: r: Apply patch to fix linking against R.
...
* gnu/packages/patches/r-fix-15899.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/statistics.scm (r)[source]: Use it.
2015-05-21 11:54:46 +02:00
3a6fb858ad
gnu: bitlbee: Update to 3.4.
...
* gnu/packages/patches/bitlbee-configure-doc-fix.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/messaging.scm (bitlbee): Update to 3.4. Add patch.
[inputs]: Remove 'zlib'.
2015-05-20 16:07:09 -04:00
f6708fcdb2
gnu: qemu: Update to 2.3.0; add fix for CVE-2015-3456.
...
* gnu/packages/patches/qemu-CVE-2015-3456.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/qemu.scm (qemu-headless): Update to 2.3.0. Add patch.
2015-05-14 19:36:19 -04:00
Mark H Weaver
David Thompson
Ricardo Wurmus
Andreas Enge
Ludovic Courtès
Eric Bavier
Claes Wallin
amz3
Manolis Ragkousis
宋文武