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Author SHA1 Message Date
Ricardo Wurmus c14f5bd30a
gnu: r-genetclassifier: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-genetclassifier): Update to 1.34.0.
 2021-11-07 22:34:58 +00:00
Ricardo Wurmus b8394117f9
gnu: r-minet: Update to 3.52.0. 
* gnu/packages/bioconductor.scm (r-minet): Update to 3.52.0.
 2021-11-07 22:34:58 +00:00
Ricardo Wurmus 6cec550e20
gnu: r-biobtreer: Update to 1.6.0. 
* gnu/packages/bioconductor.scm (r-biobtreer): Update to 1.6.0.
 2021-11-07 22:34:58 +00:00
Ricardo Wurmus b223a11c41
gnu: r-bgeedb: Update to 2.20.0. 
* gnu/packages/bioconductor.scm (r-bgeedb): Update to 2.20.0.
 2021-11-07 22:34:58 +00:00
Ricardo Wurmus bdb55dcdf7
gnu: r-bgeecall: Update to 1.10.0. 
* gnu/packages/bioconductor.scm (r-bgeecall): Update to 1.10.0.
 2021-11-07 22:34:58 +00:00
Ricardo Wurmus 744c9f4351
gnu: r-beclear: Update to 2.10.0. 
* gnu/packages/bioconductor.scm (r-beclear): Update to 2.10.0.
 2021-11-07 22:34:58 +00:00
Ricardo Wurmus 8dd33b890a
gnu: r-megadepth: Update to 1.4.0. 
* gnu/packages/bioconductor.scm (r-megadepth): Update to 1.4.0.
 2021-11-07 22:34:58 +00:00
Ricardo Wurmus 7ed7b40b18
gnu: r-ballgown: Update to 2.26.0. 
* gnu/packages/bioconductor.scm (r-ballgown): Update to 2.26.0.
 2021-11-07 22:34:57 +00:00
Ricardo Wurmus 558abe3b47
gnu: r-sushi: Update to 1.31.0. 
* gnu/packages/bioconductor.scm (r-sushi): Update to 1.31.0.
 2021-11-07 22:34:57 +00:00
Ricardo Wurmus c7641e4327
gnu: r-guitar: Update to 2.10.0. 
* gnu/packages/bioconductor.scm (r-guitar): Update to 2.10.0.
 2021-11-07 22:34:57 +00:00
Ricardo Wurmus 97c0e316d3
gnu: r-chromstar: Update to 1.19.0. 
* gnu/packages/bioconductor.scm (r-chromstar): Update to 1.19.0.
 2021-11-07 22:34:57 +00:00
Ricardo Wurmus 41c4e6391d
gnu: r-snpstats: Update to 1.44.0. 
* gnu/packages/bioconductor.scm (r-snpstats): Update to 1.44.0.
 2021-11-07 22:34:57 +00:00
Ricardo Wurmus ce510880ec
gnu: r-pathview: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-pathview): Update to 1.34.0.
 2021-11-07 22:34:57 +00:00
Ricardo Wurmus a8fb8beb31
gnu: r-ldblock: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-ldblock): Update to 1.24.0.
 2021-11-07 22:34:57 +00:00
Ricardo Wurmus 7b6b39bd97
gnu: r-kegggraph: Update to 1.54.0. 
* gnu/packages/bioconductor.scm (r-kegggraph): Update to 1.54.0.
 2021-11-07 22:34:57 +00:00
Ricardo Wurmus ab00f1b61c
gnu: r-gwascat: Update to 2.26.0. 
* gnu/packages/bioconductor.scm (r-gwascat): Update to 2.26.0.
 2021-11-07 22:34:57 +00:00
Ricardo Wurmus 38a7f29374
gnu: r-gviz: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.38.0.
 2021-11-07 22:34:57 +00:00
Ricardo Wurmus 6d193b3288
gnu: r-ggbio: Update to 1.42.0. 
* gnu/packages/bioconductor.scm (r-ggbio): Update to 1.42.0.
 2021-11-07 22:34:57 +00:00
Ricardo Wurmus b1de4e61a0
gnu: r-erma: Update to 1.10.0. 
* gnu/packages/bioconductor.scm (r-erma): Update to 1.10.0.
 2021-11-07 22:34:57 +00:00
Ricardo Wurmus eed4a322f1
gnu: r-catalyst: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-catalyst): Update to 1.18.0.
 2021-11-07 22:34:57 +00:00
Ricardo Wurmus 9df8fa7b38
gnu: r-msmstests: Update to 1.32.0. 
* gnu/packages/bioconductor.scm (r-msmstests): Update to 1.32.0.
 2021-11-07 22:34:57 +00:00
Ricardo Wurmus 357c74ef3e
gnu: r-msmseda: Update to 1.32.0. 
* gnu/packages/bioconductor.scm (r-msmseda): Update to 1.32.0.
 2021-11-07 22:34:57 +00:00
Ricardo Wurmus 2de21518f1
gnu: r-biocio: Update to 1.4.0. 
* gnu/packages/bioconductor.scm (r-biocio): Update to 1.4.0.
 2021-11-07 22:34:56 +00:00
Ricardo Wurmus ffcb3606d0
gnu: r-mscoreutils: Update to 1.6.0. 
* gnu/packages/bioconductor.scm (r-mscoreutils): Update to 1.6.0.
 2021-11-07 22:34:56 +00:00
Ricardo Wurmus 5c75a6d18e
gnu: r-delayedmatrixstats: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.16.0.
 2021-11-07 22:34:56 +00:00
Ricardo Wurmus de38a03f61
gnu: r-sparsematrixstats: Update to 1.6.0. 
* gnu/packages/bioconductor.scm (r-sparsematrixstats): Update to 1.6.0.
 2021-11-07 22:34:56 +00:00
Ricardo Wurmus e4cfcbfda3
gnu: r-scran: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-scran): Update to 1.22.0.
 2021-11-07 22:34:56 +00:00
Ricardo Wurmus 980e6af8aa
gnu: r-scater: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-scater): Update to 1.22.0.
[propagated-inputs]: Add r-ggrepel.
 2021-11-07 22:34:56 +00:00
Ricardo Wurmus 08defd9cdb
gnu: r-scuttle: Update to 1.4.0. 
* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.4.0.
 2021-11-07 22:34:56 +00:00
Ricardo Wurmus c7b54ba026
gnu: r-singlecellexperiment: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-singlecellexperiment): Update to 1.16.0.
 2021-11-07 22:34:56 +00:00
Ricardo Wurmus 9f7327588d
gnu: r-chromvar: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-chromvar): Update to 1.16.0.
 2021-11-07 22:34:56 +00:00
Ricardo Wurmus 5eb0f4d20e
gnu: r-motifmatchr: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-motifmatchr): Update to 1.16.0.
 2021-11-07 22:34:56 +00:00
Ricardo Wurmus d15fac3713
gnu: r-tfbstools: Update to 1.32.0. 
* gnu/packages/bioconductor.scm (r-tfbstools): Update to 1.32.0.
 2021-11-07 22:34:56 +00:00
Ricardo Wurmus d6130127e8
gnu: r-cner: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-cner): Update to 1.30.0.
 2021-11-07 22:34:56 +00:00
Ricardo Wurmus 756f5411a9
gnu: r-beachmat: Update to 2.10.0. 
* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.10.0.
 2021-11-07 22:34:56 +00:00
Ricardo Wurmus 29111142d1
gnu: r-rhdf5lib: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-rhdf5lib): Update to 1.16.0.
 2021-11-07 22:34:56 +00:00
Ricardo Wurmus 6f2d0551f1
gnu: r-hdf5array: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.22.0.
 2021-11-07 22:34:55 +00:00
Ricardo Wurmus 77450726d6
gnu: r-hitc: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-hitc): Update to 1.38.0.
 2021-11-07 22:34:55 +00:00
Ricardo Wurmus 2603747a56
gnu: r-fithic: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-fithic): Update to 1.20.0.
 2021-11-07 22:34:55 +00:00
Ricardo Wurmus 7752397cf1
gnu: r-rgraphviz: Update to 2.38.0. 
* gnu/packages/bioconductor.scm (r-rgraphviz): Update to 2.38.0.
 2021-11-07 22:34:55 +00:00
Ricardo Wurmus 1417f1171c
gnu: r-s4vectors: Update to 0.32.0. 
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.32.0.
 2021-11-07 22:34:55 +00:00
Ricardo Wurmus 51f9943d1e
gnu: r-preprocesscore: Update to 1.56.0. 
* gnu/packages/bioconductor.scm (r-preprocesscore): Update to 1.56.0.
 2021-11-07 22:34:55 +00:00
Ricardo Wurmus fdf61867d6
gnu: r-icens: Update to 1.66.0. 
* gnu/packages/bioconductor.scm (r-icens): Update to 1.66.0.
 2021-11-07 22:34:55 +00:00
Ricardo Wurmus 0d62874ccf
gnu: r-m3c: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-m3c): Update to 1.16.0.
 2021-11-07 22:34:55 +00:00
Ricardo Wurmus 1be95ea425
gnu: r-rgreat: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-rgreat): Update to 1.26.0.
 2021-11-07 22:34:55 +00:00
Ricardo Wurmus af5ff34f24
gnu: r-pcatools: Update to 2.6.0. 
* gnu/packages/bioconductor.scm (r-pcatools): Update to 2.6.0.
 2021-11-07 22:34:55 +00:00
Ricardo Wurmus b24de9bf77
gnu: r-biodist: Update to 1.66.0. 
* gnu/packages/bioconductor.scm (r-biodist): Update to 1.66.0.
 2021-11-07 22:34:55 +00:00
Ricardo Wurmus b9c74b05d7
gnu: r-biocworkflowtools: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-biocworkflowtools): Update to 1.20.0.
 2021-11-07 22:34:55 +00:00
Ricardo Wurmus 2e0b3797af
gnu: r-biocset: Update to 1.8.0. 
* gnu/packages/bioconductor.scm (r-biocset): Update to 1.8.0.
 2021-11-07 22:34:55 +00:00
Ricardo Wurmus b2253e6ceb
gnu: r-biocpkgtools: Update to 1.12.0. 
* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.12.0.
 2021-11-07 22:34:55 +00:00
Ricardo Wurmus a6dd46bfc5
gnu: r-biocor: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-biocor): Update to 1.18.0.
 2021-11-07 22:34:55 +00:00
Ricardo Wurmus b9275baa5a
gnu: r-bioconcotk: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-bioconcotk): Update to 1.14.0.
 2021-11-07 22:34:54 +00:00
Ricardo Wurmus e46b5ad21b
gnu: r-multiassayexperiment: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.20.0.
 2021-11-07 22:34:54 +00:00
Ricardo Wurmus c208e75fe4
gnu: r-grohmm: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-grohmm): Update to 1.28.0.
 2021-11-07 22:34:54 +00:00
Ricardo Wurmus 2adab76473
gnu: r-experimenthub: Update to 2.2.0. 
* gnu/packages/bioconductor.scm (r-experimenthub): Update to 2.2.0.
 2021-11-07 22:34:54 +00:00
Ricardo Wurmus f1014a64c9
gnu: r-biocviews: Update to 1.62.1. 
* gnu/packages/bioconductor.scm (r-biocviews): Update to 1.62.1.
 2021-11-07 22:34:54 +00:00
Ricardo Wurmus d13db6d1c5
gnu: r-biocstyle: Update to 2.22.0. 
* gnu/packages/bioconductor.scm (r-biocstyle): Update to 2.22.0.
 2021-11-07 22:34:54 +00:00
Ricardo Wurmus 388fa5f020
gnu: r-biocgraph: Update to 1.56.0. 
* gnu/packages/bioconductor.scm (r-biocgraph): Update to 1.56.0.
 2021-11-07 22:34:54 +00:00
Ricardo Wurmus fa77f4f154
gnu: r-bioccheck: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-bioccheck): Update to 1.30.0.
 2021-11-07 22:34:54 +00:00
Ricardo Wurmus 755fd4d87d
gnu: r-ebarrays: Update to 2.58.0. 
* gnu/packages/bioconductor.scm (r-ebarrays): Update to 2.58.0.
 2021-11-07 22:34:54 +00:00
Ricardo Wurmus 71eae6eabe
gnu: r-reactomepa: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-reactomepa): Update to 1.38.0.
 2021-11-07 22:34:54 +00:00
Ricardo Wurmus 7ea681d5d5
gnu: r-graphite: Update to 1.40.0. 
* gnu/packages/bioconductor.scm (r-graphite): Update to 1.40.0.
[native-inputs]: Remove r-knitr.
 2021-11-07 22:34:54 +00:00
Ricardo Wurmus 7034456e2c
gnu: r-biobroom: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-biobroom): Update to 1.26.0.
 2021-11-07 22:34:54 +00:00
Ricardo Wurmus 27791b2517
gnu: r-bioassayr: Update to 1.32.0. 
* gnu/packages/bioconductor.scm (r-bioassayr): Update to 1.32.0.
 2021-11-07 22:34:54 +00:00
Ricardo Wurmus 9e6f77714b
gnu: r-chemminer: Update to 3.46.0. 
* gnu/packages/bioconductor.scm (r-chemminer): Update to 3.46.0.
[propagated-inputs]: Add r-jsonlite and r-stringi.
 2021-11-07 22:34:54 +00:00
Ricardo Wurmus 97e275b7b9
gnu: r-bigpint: Update to 1.10.0. 
* gnu/packages/bioconductor.scm (r-bigpint): Update to 1.10.0.
 2021-11-07 22:34:53 +00:00
Ricardo Wurmus 8eef74bce1
gnu: r-biggr: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-biggr): Update to 1.30.0.
 2021-11-07 22:34:53 +00:00
Ricardo Wurmus 2b5e606027
gnu: r-hyperdraw: Update to 1.46.0. 
* gnu/packages/bioconductor.scm (r-hyperdraw): Update to 1.46.0.
 2021-11-07 22:34:53 +00:00
Ricardo Wurmus 14b524486d
gnu: r-hypergraph: Update to 1.66.0. 
* gnu/packages/bioconductor.scm (r-hypergraph): Update to 1.66.0.
 2021-11-07 22:34:53 +00:00
Ricardo Wurmus 66674da16d
gnu: r-rsbml: Update to 2.52.0. 
* gnu/packages/bioconductor.scm (r-rsbml): Update to 2.52.0.
 2021-11-07 22:34:53 +00:00
Ricardo Wurmus 4100392b19
gnu: r-bifet: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-bifet): Update to 1.14.0.
 2021-11-07 22:34:53 +00:00
Ricardo Wurmus afb55b19d4
gnu: r-bicare: Update to 1.52.0. 
* gnu/packages/bioconductor.scm (r-bicare): Update to 1.52.0.
 2021-11-07 22:34:53 +00:00
Ricardo Wurmus 69362a6222
gnu: r-bhc: Update to 1.46.0. 
* gnu/packages/bioconductor.scm (r-bhc): Update to 1.46.0.
 2021-11-07 22:34:53 +00:00
Ricardo Wurmus 8c6a8a6072
gnu: r-bgx: Update to 1.60.0. 
* gnu/packages/bioconductor.scm (r-bgx): Update to 1.60.0.
 2021-11-07 22:34:53 +00:00
Ricardo Wurmus 1feba301d6
gnu: r-bgmix: Update to 1.54.0. 
* gnu/packages/bioconductor.scm (r-bgmix): Update to 1.54.0.
 2021-11-07 22:34:53 +00:00
Ricardo Wurmus fcaf2e80ad
gnu: r-universalmotif: Update to 1.12.1. 
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.12.1.
 2021-11-07 22:34:53 +00:00
Ricardo Wurmus cdb78e54e6
gnu: r-unifiedwmwqpcr: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-unifiedwmwqpcr): Update to 1.30.0.
 2021-11-07 22:34:53 +00:00
Ricardo Wurmus f61d3ac6ce
gnu: r-htqpcr: Update to 1.48.0. 
* gnu/packages/bioconductor.scm (r-htqpcr): Update to 1.48.0.
 2021-11-07 22:34:53 +00:00
Ricardo Wurmus de8a55d138
gnu: r-variancepartition: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.24.0.
[propagated-inputs]: Remove r-colorramps; add r-matrix and r-rlang.
 2021-11-07 22:34:53 +00:00
Ricardo Wurmus beb530df2a
gnu: r-variantfiltering: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-variantfiltering): Update to 1.30.0.
 2021-11-07 22:34:53 +00:00
Ricardo Wurmus 8dbca889e0
gnu: r-timeseriesexperiment: Update to 1.12.0. 
* gnu/packages/bioconductor.scm (r-timeseriesexperiment): Update to 1.12.0.
 2021-11-07 22:34:52 +00:00
Ricardo Wurmus a326c65428
gnu: r-wavcluster: Update to 2.28.0. 
* gnu/packages/bioconductor.scm (r-wavcluster): Update to 2.28.0.
 2021-11-07 22:34:52 +00:00
Ricardo Wurmus bbfeee3ee4
gnu: r-reqon: Update to 1.40.0. 
* gnu/packages/bioconductor.scm (r-reqon): Update to 1.40.0.
 2021-11-07 22:34:52 +00:00
Ricardo Wurmus 10a7837bb8
gnu: r-seqbias: Update to 1.42.0. 
* gnu/packages/bioconductor.scm (r-seqbias): Update to 1.42.0.
 2021-11-07 22:34:52 +00:00
Ricardo Wurmus 8305dd2411
gnu: r-bigmelon: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-bigmelon): Update to 1.20.0.
[propagated-inputs]: Add r-illuminaio.
 2021-11-07 22:34:52 +00:00
Ricardo Wurmus 0837205009
gnu: r-gdsfmt: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.30.0.
 2021-11-07 22:34:52 +00:00
Ricardo Wurmus f3e1fe2b2f
gnu: r-watermelon: Update to 2.0.0. 
* gnu/packages/bioconductor.scm (r-watermelon): Update to 2.0.0.
[native-inputs]: Add r-knitr.
 2021-11-07 22:34:52 +00:00
Ricardo Wurmus 316bf235c0
gnu: r-roc: Update to 1.70.0. 
* gnu/packages/bioconductor.scm (r-roc): Update to 1.70.0.
[propagated-inputs]: Remove r-knitr.
[native-inputs]: Add r-knitr.
 2021-11-07 22:34:52 +00:00
Ricardo Wurmus 26e3242dba
gnu: r-genie3: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-genie3): Update to 1.16.0.
 2021-11-07 22:34:52 +00:00
Ricardo Wurmus cace0f424b
gnu: r-circrnaprofiler: Update to 1.8.0. 
* gnu/packages/bioconductor.scm (r-circrnaprofiler): Update to 1.8.0.
 2021-11-07 22:34:52 +00:00
Ricardo Wurmus 6f9be50deb
gnu: r-cicero: Update to 1.12.0. 
* gnu/packages/bioconductor.scm (r-cicero): Update to 1.12.0.
 2021-11-07 22:34:52 +00:00
Ricardo Wurmus 75aed1303a
gnu: r-chicago: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-chicago): Update to 1.22.0.
 2021-11-07 22:34:51 +00:00
Ricardo Wurmus 398007448c
gnu: r-rcistarget: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-rcistarget): Update to 1.14.0.
 2021-11-07 22:34:51 +00:00
Ricardo Wurmus 20d81fa969
gnu: r-depecher: Update to 1.10.0. 
* gnu/packages/bioconductor.scm (r-depecher): Update to 1.10.0.
 2021-11-07 22:34:51 +00:00
Ricardo Wurmus 765ed6a2c9
gnu: r-mixomics: Update to 6.17.26. 
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.17.26.
 2021-11-07 22:34:51 +00:00
Ricardo Wurmus 789958567e
gnu: r-flowsom: Update to 2.2.0. 
* gnu/packages/bioconductor.scm (r-flowsom): Update to 2.2.0.
 2021-11-07 22:34:51 +00:00
Ricardo Wurmus 76a0df65d2
gnu: r-cytoml: Update to 2.6.0. 
* gnu/packages/bioconductor.scm (r-cytoml): Update to 2.6.0.
 2021-11-07 22:34:51 +00:00
Ricardo Wurmus b6410270ba
gnu: r-opencyto: Update to 2.6.0. 
* gnu/packages/bioconductor.scm (r-opencyto): Update to 2.6.0.
 2021-11-07 22:34:51 +00:00
Ricardo Wurmus 101cad4791
gnu: r-flowstats: Update to 4.6.0. 
* gnu/packages/bioconductor.scm (r-flowstats): Update to 4.6.0.
 2021-11-07 22:34:51 +00:00
Ricardo Wurmus 42df07647a
gnu: r-flowworkspace: Update to 4.6.0. 
* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 4.6.0.
 2021-11-07 22:34:51 +00:00