4ae8390ffc
gnu: python-djangorestframework: Update to 3.12.4.
...
* gnu/packages/django.scm (python-djangorestframework): Update to 3.12.4.
2021-05-05 23:48:20 +02:00
7cacd8c8da
gnu: python-django-picklefield: Test with Django 2.2.
...
* gnu/packages/django.scm (python-django-picklefield)[native-inputs]: Change
from PYTHON-DJANGO to PYTHON-DJANGO-2.2.
2021-05-05 23:48:20 +02:00
3239a2d5a5
gnu: python-django-debug-toolbar: Update to 3.2.1.
...
* gnu/packages/django.scm (python-django-debug-toolbar): Update to 3.2.1.
2021-05-05 23:48:20 +02:00
151f1720e3
gnu: python-sqlparse: Remove unnecessary runtime dependencies.
...
* gnu/packages/databases.scm (python-sqlparse)[arguments]: Override 'wrap'
phase.
2021-05-05 23:48:20 +02:00
b36b588105
gnu: python-cached-property: Update to 1.5.2.
...
* gnu/packages/python-xyz.scm (python-cached-property): Update to 1.5.2.
2021-05-05 23:48:20 +02:00
9e5acf045d
gnu: python-netaddr: Update to 0.8.0.
...
* gnu/packages/python-xyz.scm (python-netaddr): Update to 0.8.0.
2021-05-05 23:48:19 +02:00
4cfc87d699
gnu: python-asgiref: Update to 3.3.4.
...
* gnu/packages/python-web.scm (python-asgiref): Update to 3.3.4.
2021-05-05 23:48:19 +02:00
3dcbcd4fa5
gnu: python-bcrypt: Update to 3.2.0.
...
* gnu/packages/python-crypto.scm (python-bcrypt): Update to 3.2.0.
2021-05-05 23:48:19 +02:00
5ede810185
gnu: python-django-auth-ldap: Update to 2.4.0.
...
* gnu/packages/django.scm (python-django-auth-ldap): Update to 2.4.0.
2021-05-05 23:48:19 +02:00
314f96421e
gnu: python-sqlparse: Update to 0.4.1.
...
* gnu/packages/databases.scm (python-sqlparse): Update to 0.4.1.
2021-05-05 23:48:19 +02:00
a1cd01e622
gnu: uBlock Origin: Update to 1.35.2.
...
* gnu/packages/browser-extensions.scm (uassets): Update to f52147302.
(ublock-origin): Update to 1.35.2.
2021-05-05 23:48:19 +02:00
1ca0a9a307
gnu: rasdaemon: Fix Texinfo syntax of description.
...
Regression introduced in 58805da44d
2021-05-05 23:42:57 +02:00
0e2251fcf8
gnu: linux-libre-headers: Remove rsync dependency.
...
The resulting packages are bit-identical, sans for a missing empty "uapi"
directory in versions < 5.3.
* gnu/packages/commencement.scm (rsync-boot0): Remove variable.
(linux-libre-headers-boot0)[native-inputs]: Remove RSYNC-BOOT0.
* gnu/packages/linux.scm (make-linux-libre-headers*)[native-inputs]: Remove
RSYNC.
[arguments]: For newer kernel versions, run "make headers" instead of
"make headers_check" before installing. Use FIND-FILES and INSTALL-FILE
instead of calling "make headers_install". Remove ".install" files workaround.
2021-05-05 23:29:36 +02:00
f47b8b332b
gnu: emacs-vertico: Update to 0.8.
...
* gnu/packages/emacs-xyz.scm (emacs-vertico): Update to 0.8.
Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-05-05 19:21:12 +02:00
de9c69516a
gnu: emacs-corfu: Update to 0.6.
...
* gnu/packages/emacs-xyz.scm (emacs-corfu): Update to 0.6.
Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-05-05 19:21:12 +02:00
d6104e3b85
gnu: libsoup: Disable ssl-test.
...
* gnu/packages/gnome.scm (libsoup)[phases](adjust-tests): Modify.
[native-inputs]: Remove gnutls.
2021-05-05 12:05:52 -04:00
0dd1a5c058
gnu: gtkmm@2: Override inheritance of certain changes from gtkmm.
...
Recent changes made to gtkmm (2a0d8cfaae
2021-05-05 11:35:29 -04:00
2a0d8cfaae
gnu: gtkmm: Change build-system and adjust arguments accordingly.
...
Switch to meson-build-system, as its preferred by the project.
Preserve building of documentation.
* gnu/packages/gtk.scm (gtkmm)[build-system]: Change from glib-or-gtk
to meson.
[configure-flags](build-documentation): New flag.
2021-05-05 11:33:34 -04:00
f30e8f2909
gnu: Add tla2tools.
...
This introduces tla2tools.jar, which contains the TLA+ model checker
and simulator (TLC); a TLA+ REPL; a semantic analyzer (SANY); the TLATeX
typesetting system; PlusCal translator; and more. I have added five
wrapper scripts for convenience, rather than invoking `java' manually.
The wrapper scripts are not comprehensive; users who are familiar with
tla2tools.jar, or have read the book Specifying Systems, may still
invoke the commands in the traditional way.
The minimum JDK version is 11. I chose to stick with that rather than
bumping it to 14 (which is the largest version currently in Guix)
because each OpenJDK version in Guix depends on the version before it,
and so it needlessly results in many 100s of MiB of unnecessary
dependencies.
Note that this is _not_ the TLA+ Toolbox, which is the GUI commonly used
with TLA+.
* gnu/packages/java.scm (tla2tools): New variable.
* gnu/packages/patches/tla2tools-build-xml.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:46 +02:00
674b4bd1a6
gnu: Add java-jline-reader.
...
This package is part of JLine 3.
* gnu/packages/java.scm (java-jline-reader): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:45 +02:00
1700dfefbe
gnu: Add java-jline-terminal.
...
This is part of JLine 3.
I was able to get this working properly under Guix by providing ncurses'
infocmp, as well as ensuring the *.caps files were present in the JAR,
but similar methods didn't work for the tests; if you have Java
knowledge, I'd appreciate the help getting those tests enabled.
* gnu/packages/java.scm (java-jline-terminal): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:45 +02:00
e28ea14693
gnu: Add java-eclipse-lsp4j packages.
...
All of these packages are components of java-eclipse-lsp4j, packaged
independently. This contains only what was needed for tla2tools, and so
there are parts of java-eclipse-lsp4j that are not packaged.
Note that this does not package the latest version (0.12.0 at the time
of writing)---it depends on the Xtend language, which is a huge
packaging effort. 0.10.0 is the version expected by tla2tools, for
which this dependency was introduced.
* gnu/packages/java.scm (java-eclipse-lsp4j-common): New variable.
(java-eclipse-lsp4j-jsonrpc): New variable.
(java-eclipse-lsp4j-jsonrpc-debug): New variable.
(java-eclipse-lsp4j-generator): New variable.
(java-eclipse-lsp4j-debug): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:45 +02:00
58b0258a20
gnu: Add java-eclipse-xtext-xbase-lib.
...
This package is a component of xtext-lib. The rest of xtext-lib was not
added.
* gnu/packages/java.scm (java-eclipse-xtext-xbase-lib): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:45 +02:00
45915d331a
gnu: Add java-gson-2.8.6.
...
This introduces a new package rather than upgrading the exist java-gson
package because it is built using OpenJDK11; I didn't want to have to
propagate that JDK dependency to the other packages that use it.
OpenJDK 11 was chosen becuase this dependency was introduced for
tla2tools.
* gnu/packages/java.scm (java-gson-2.8.6): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:45 +02:00
0ca37f3c7d
gnu: racket: Add aditional mirrors.
...
* gnu/packages/racket.scm (racket-minimal, racket)[source](uri): Lift
base urls into a new internal variable, '%installer-mirrors'.
Add mirrors at the University of Utah, Northwestern University,
the University of Waterloo, and Vrije Universiteit Brussel (Infogroep).
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:45 +02:00
93867cb3be
gnu: racket: Racket inherits racket-minimal, not vice versa.
...
By design, the `racket` package is equivalent to 'racket-minimal'
plus 'raco pkg install -i main-distribution'.
This switch brings the Guix packages a small step closer to that goal.
* gnu/packages/racket.scm (racket-minimal, racket): Change
'racket-minimal' to be the base package and 'racket' to inherit
from it. Move 'version', 'patches', 'home-page', 'build-system',
'arguments', and 'license' to 'racket-minimal'.
* gnu/packages/racket.scm (racket)[inputs]: Rather than copy and
pasting, use '(package-inputs racket-minimal)'.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:45 +02:00
cd9454f6ed
gnu: racket: Remove obsolete patch.
...
* gnu/packages/racket.scm (racket)[source](patches): Remove
"racket-store-checksum-override.patch", which is no longer needed since
we stopped injecting store paths into Racket files in commit 834aa48:
see <https://issues.guix.gnu.org/47180 >.
* gnu/packages/patches/racket-store-checksum-override.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:44 +02:00
3df04eb09f
gnu: racket: Move to (gnu packages racket).
...
* gnu/packages/scheme.scm (racket,racket-minimal): Move to ...
* gnu/packages/racket.scm: ... this new file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/racket.scm (racket)[synopsis]: Tweak.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:44 +02:00
3eec8cd31d
gnu: Add labplot.
...
* gnu/packages/kde.scm (labplot): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:44 +02:00
adc96e1db3
gnu: Add libcerf.
...
* gnu/packages/maths.scm (libcerf): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:44 +02:00
9661eb86e0
gnu: Add castget.
...
* gnu/packages/gpodder.scm (castget): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:44 +02:00
9c3986ffaf
gnu: Add xmlsec-openssl.
...
* gnu/packages/xml.scm (xmlsec-openssl): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:44 +02:00
561db254a5
gnu: xboard: Set default engine to gnuchess.
...
Fixes <https://issues.guix.gnu.org/45236 >.
* gnu/packages/games.scm (xboard): Set default engine to gnuchess.
[arguments]: Add phase 'patch-default-engine.
[inputs]: Add chess.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:43 +02:00
7b83f6b992
gnu: lepton-eda: Switch to Guile 3.0.
...
* gnu/packages/engineering.scm (lepton-eda)[inputs]: Replace GUILE-2.2
with GUILE-3.0.
2021-05-05 16:56:43 +02:00
da7f89c737
gnu: python-pybedtools: Update to 0.8.2.
...
* gnu/packages/bioinformatics.scm (python-pybedtools): Update to 0.8.2.
[arguments]: Remove outdated substitutions; simplify check phase.
2021-05-05 16:18:13 +02:00
75af43162e
gnu: python-nbconvert: Use patched texlive-amsfonts.
...
This is intended to fix a non-deterministic build error when xelatex inspects
the fonts directory and finds a broken font from texlive-amsfonts before the
correct font in texlive-cm.
* gnu/packages/python-xyz.scm (python-nbconvert)[native-inputs]: Replace
texlive-amsfonts with texlive-amsfonts/patched.
2021-05-05 15:28:14 +02:00
9db6798824
gnu: Add texlive-amsfonts/patched.
...
* gnu/packages/tex.scm (texlive-amsfonts/patched): New variable.
2021-05-05 15:28:06 +02:00
c1036042a5
gnu: crm114: Use emacs-build-system install phase.
...
* gnu/packages/mail.scm (crm114)[arguments]: Install the crm114 emacs mode
using the install phase from emacs-build-system, instead of in the custom
pre-install phase. Run the make-autoloads phase after this new
install-emacs-mode phase.
Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-05-05 10:01:48 +02:00
dd3e4fe6e7
gnu: guile2.2-guix: Add missing dependencies.
...
Reported by Maxime Devos <maximedevos@telenet.be>.
* gnu/packages/package-management.scm (guile2.2-guix)[inputs]
[propagated-inputs]: Add GUILE2.2-LIB, GUILE2.2-ZLIB, and
GUILE2.2-LZLIB.
2021-05-05 00:57:36 +02:00
2238bd8ddc
gnu: guile-lzlib: Add Guile 2.2 variant.
...
* gnu/packages/guile.scm (guile2.2-lzlib): New variable.
2021-05-05 00:57:36 +02:00
2a9af22540
gnu: guile-zlib: Add Guile 2.2 variant.
...
* gnu/packages/guile.scm (guile2.2-zlib): New variable.
2021-05-05 00:57:36 +02:00
c3f20a6678
gnu: guix: Phases refer to #:system, #:target, and #:native-inputs.
...
* gnu/packages/package-management.scm (guix)[arguments]: In
'copy-bootstrap-guile' and 'wrap-program' phases, refer to #:system,
#:native-inputs, and #:target instead of unquoting (%current-system)
and (%current-target-system).
2021-05-05 00:57:36 +02:00
e42bfd236e
gnu: guix: Avoid Bash wrapper.
...
The Bash wrapper created by 'wrap-program' creates an extra
indirection and may annoyingly emit locale warnings:
/gnu/store/…-bash-minimal-5.0.16/bin/bash: warning: setlocale: LC_ALL: cannot change locale (wtf)
This warning would typically show up when running Guix, as produced by
'guix pack guix', on a foreign distro, annihilating efforts made in
1d4ab335b28a973abc6f38b9af7c92
2021-05-05 00:57:35 +02:00
55f7cd701c
gnu: guix: Add run-time dependency on Guile-Lib.
...
This is a followup to 02e2e093e8
2021-05-05 00:57:35 +02:00
7593d1b4b8
gnu: lepton-eda: Update to 1.9.14-20210407.
...
* gnu/packages/engineering.scm (lepton-eda): Update to 1.9.14-20210407.
[arguments]: Adjust file names in 'fix-dynamic-link' phase.
2021-05-05 00:57:35 +02:00
2959adef94
gnu: Add node-once.
...
* gnu/packages/node-xyz.scm (node-once): New variable.
Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2021-05-04 23:10:03 +02:00
a6992b38e7
gnu: knockd: Omit duplicate COPYING copy.
...
* gnu/packages/networking.scm (knockd)[arguments]: Set the typical
‘--docdir’.
2021-05-04 22:48:34 +02:00
222e691666
gnu: knockd: Update to 0.8.
...
* gnu/packages/networking.scm (knockd): Update to 0.8.
2021-05-04 22:48:34 +02:00
763feb97cd
gnu: powertop: Update to 2.14.
...
* gnu/packages/linux.scm (powertop): Update to 2.14.
[source]: Use GIT-FETCH and GIT-FILE-NAME.
[arguments]: Add required #:configure-flags.
[native-inputs]: Add autoconf, automake, gettext, and libtool.
2021-05-04 22:48:34 +02:00
14173cf4e9
gnu: rasdaemon: Edit synopsis & description.
...
* gnu/packages/linux.scm (rasdaemon)[description]: Fix typo and edit.
2021-05-04 22:48:34 +02:00
27ee59d6a0
gnu: java-javaparser: Upgrade os.name to ‘Guix’.
...
* gnu/packages/java.scm (java-javaparser)[arguments]: Drop ‘SD’.
2021-05-04 22:48:34 +02:00
58f4b49a52
gnu: go-gopkg-in-go-playground-assert-v1: Fix typo in description.
...
* gnu/packages/golang.scm (go-gopkg-in-go-playground-assert-v1)
[description]: Fix typo.
2021-05-04 22:30:01 +02:00
aa7eeabe9a
gnu: Add r-naturalsort.
...
* gnu/packages/cran.scm (r-naturalsort): New variable.
2021-05-04 21:34:24 +02:00
4ca8a00263
gnu: Exim: Update to 4.94.2 [security fixes].
...
Fixes CVE-2020-{27216,28007,28008,28009,28010,28011,28012,28013,28014,28015,
28016,28017,28018,28019,28020,28021,28022,28023,28024,28025,28026}.
See the upstream security advisory for more information:
https://exim.org/static/doc/security/CVE-2020-qualys/21nails.txt
* gnu/packages/mail.scm (exim): Update to 4.94.2.
2021-05-04 11:42:07 -04:00
721c5a8709
gnu: s6-linux-init: Update to 1.0.6.3.
...
* gnu/packages/skarnet.scm (s6-linux-init): Update to 1.0.6.3.
2021-05-04 16:14:15 +02:00
9a12fbebb9
gnu: ethtool: Update to 5.12.
...
* gnu/packages/networking.scm (ethtool): Update to 5.12.
2021-05-04 16:12:44 +02:00
8ff0d32df6
gnu: gthumb: Update to 3.10.3.
...
* gnu/packages/gnome.scm (gthumb): Update to 3.10.3.
2021-05-04 16:09:03 +02:00
9432c40f8d
gnu: libhandy: Update to 1.2.2.
...
* gnu/packages/gnome.scm (libhandy): Update to 1.2.2.
2021-05-04 15:58:38 +02:00
06cf2fc01f
gnu: busybox: Update to 1.33.1.
...
* gnu/packages/busybox.scm (busybox): Update to 1.33.1.
[source]: Remove upstreamed patch.
* gnu/packages/patches/busybox-CVE-2021-28831.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2021-05-04 15:56:27 +02:00
a49a007328
gnu: indi: Stop returning #t from phases.
...
* gnu/packages/astronomy.scm (indi)[arguments]: Remove #t phase return values.
2021-05-04 15:40:33 +02:00
9a40c1d5bb
gnu: indi: Respect #:tests?.
...
* gnu/packages/astronomy.scm (indi)[arguments]: Respect #:tests? in the
'check phase.
2021-05-04 15:40:33 +02:00
7f540e3ce0
gnu: indi: Check slightly more functionally.
...
* gnu/packages/astronomy.scm (indi)[arguments]: Substitute
WITH-DIRECTORY-EXCURSION for double CHDIR.
2021-05-04 15:40:33 +02:00
ead465a312
gnu: indi: Update to 1.9.0.
...
* gnu/packages/astronomy.scm (indi): Update to 1.9.0.
2021-05-04 15:40:32 +02:00
abdb0210bd
gnu: bcachefs-tools: Prepare for cross-compilation.
...
* gnu/packages/file-systems.scm (bcachefs-tools)[arguments]:
Use CC-FOR-TARGET and PKG-CONFIG-FOR-TARGET.
2021-05-04 15:40:32 +02:00
3d25bc8ae4
gnu: bcachefs-tools: Update to 0.1-6.a14d39d.
...
* gnu/packages/file-systems.scm (bcachefs-tools): Update to 0.1-6.a14d39d.
2021-05-04 15:40:32 +02:00
71f15ca871
file-systems: Rewrite comment.
...
* gnu/build/file-systems.scm (read-bcachefs-superblock): Make comment
less damned negative.
2021-05-04 15:40:32 +02:00
b6269fb7bc
file-systems: Handle abnormal ‘bcachefs fsck’ exits.
...
* gnu/build/file-systems.scm (check-bcachefs-file-system): Handle a STATUS:EXIT-VAL of #F.
2021-05-04 15:40:32 +02:00
2fc9d51381
gnu: bitcoin-core@0.21: Update to 0.21.1.
...
* gnu/packages/finance.scm (bitcoin-core-0.21): Update to 0.21.1.
2021-05-04 15:40:31 +02:00
bee797fa93
gnu: Add r-guitar.
...
* gnu/packages/bioconductor.scm (r-guitar): New variable.
2021-05-04 15:37:04 +02:00
6cd9cb0e13
gnu: python-nbconvert: Simplify build phase.
...
* gnu/packages/python-xyz.scm (python-nbconvert)[arguments]: Simplify build
phase "fix-paths-and-tests" by using WHICH; remove final boolean and reindent.
2021-05-04 15:17:18 +02:00
82c5d929b9
gnu: python-nbconvert: Use modular texlive packages.
...
* gnu/packages/python-xyz.scm (python-nbconvert)[inputs]: Remove texlive.
[native-inputs]: Add texlive-union.
2021-05-04 15:17:18 +02:00
d7ef77c8ed
gnu: Add texlive-eurosym.
...
* gnu/packages/tex.scm (texlive-eurosym): New variable.
2021-05-04 15:17:17 +02:00
50bc363a76
gnu: Add texlive-tcolorbox.
...
* gnu/packages/tex.scm (texlive-tcolorbox): New variable.
2021-05-04 15:17:17 +02:00
be50619b30
gnu: Add texlive-adjustbox.
...
* gnu/packages/tex.scm (texlive-adjustbox): New variable.
2021-05-04 15:17:17 +02:00
9855f2b975
gnu: Add texlive-collectbox.
...
* gnu/packages/tex.scm (texlive-collectbox): New variable.
2021-05-04 15:17:17 +02:00
2f99cf3f38
gnu: Add texlive-storebox.
...
* gnu/packages/tex.scm (texlive-storebox): New variable.
2021-05-04 15:17:17 +02:00
8e92a17431
gnu: Add texlive-ifoddpage.
...
* gnu/packages/tex.scm (texlive-ifoddpage): New variable.
2021-05-04 15:17:17 +02:00
3c51abe059
gnu: Add texlive-titling.
...
* gnu/packages/tex.scm (texlive-titling): New variable.
2021-05-04 15:17:17 +02:00
7ca996c3f5
gnu: sbcl-trivial-backtrace: Move lift to native-inputs.
...
* gnu/packages/lisp-xyz.scm (sbcl-trivial-backtrace)[inputs]: Move lift to...
[native-inputs]: ... here.
2021-05-04 13:58:31 +02:00
4c2f810f97
gnu: sbcl-trivial-backtrace: Update to 1.1.0-1.6eb65bd
...
* gnu/packages/lisp-xyz.scm (sbcl-trivial-backtrace): Update
to 1.1.0-1.6eb65bd.
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-05-04 13:53:03 +02:00
f46b6d6487
gnu: sbcl-static-dispatch: Update to 0.5.
...
* gnu/packages/lisp-xyz.scm (sbcl-static-dispatch): Update to 0.5.
[version]: Use annotated tag of the latest release in upstream.
[native-inputs]: Remove prove, add fiveam.
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-05-04 13:43:02 +02:00
36d4877041
gnu: sbcl-cl-environments: Update to 0.4.
...
* gnu/package/lisp-xyz.scm (sbcl-cl-environments): Update to 0.4.
[version]: Use annotated tag instead of direct commit, there are
upstream releases available now.
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-05-04 13:36:55 +02:00
7694acebd1
gnu: r-summarizedexperiment: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Move variable from here...
* gnu/packages/bioconductor.scm (r-summarizedexperiment): ...to here.
2021-05-04 10:11:34 +02:00
b602ec9fba
gnu: r-mixomics: Update to 6.14.1.
...
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.14.1.
[propagated-inputs]: Add r-biocparallel.
2021-05-04 09:47:37 +02:00
4286233e77
gnu: r-catalyst: Update to 1.14.1.
...
* gnu/packages/bioconductor.scm (r-catalyst): Update to 1.14.1.
2021-05-04 09:47:37 +02:00
2191a414ea
gnu: r-scran: Update to 1.18.7.
...
* gnu/packages/bioconductor.scm (r-scran): Update to 1.18.7.
2021-05-04 09:47:37 +02:00
3c59d34107
gnu: r-biocpkgtools: Update to 1.8.2.
...
* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.8.2.
2021-05-04 09:47:36 +02:00
b75b3ba2c7
gnu: r-experimenthub: Update to 1.16.1.
...
* gnu/packages/bioconductor.scm (r-experimenthub): Update to 1.16.1.
2021-05-04 09:47:36 +02:00
c1942727cf
gnu: r-bioassayr: Update to 1.28.3.
...
* gnu/packages/bioconductor.scm (r-bioassayr): Update to 1.28.3.
2021-05-04 09:47:36 +02:00
5bd5f755f2
gnu: r-universalmotif: Update to 1.8.5.
...
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.8.5.
2021-05-04 09:47:36 +02:00
b410f072b5
gnu: r-icobra: Update to 1.18.1.
...
* gnu/packages/bioconductor.scm (r-icobra): Update to 1.18.1.
2021-05-04 09:47:36 +02:00
b2bdc2f130
gnu: r-interactionset: Update to 1.18.1.
...
* gnu/packages/bioconductor.scm (r-interactionset): Update to 1.18.1.
2021-05-04 09:47:36 +02:00
390098ddd4
gnu: r-systempiper: Update to 1.24.6.
...
* gnu/packages/bioconductor.scm (r-systempiper): Update to 1.24.6.
2021-05-04 09:47:36 +02:00
fc1aef2ccd
gnu: r-genomeinfodb: Update to 1.26.7.
...
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.26.7.
2021-05-04 09:47:36 +02:00
8bd3170bcf
gnu: r-biocgenerics: Update to 0.36.1.
...
* gnu/packages/bioconductor.scm (r-biocgenerics): Update to 0.36.1.
2021-05-04 09:47:36 +02:00
d4051161e7
gnu: r-ensembldb: Update to 2.14.1.
...
* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.14.1.
2021-05-04 09:47:36 +02:00
7072dc8c53
gnu: r-gage: Update to 2.40.2.
...
* gnu/packages/bioinformatics.scm (r-gage): Update to 2.40.2.
2021-05-04 09:47:36 +02:00
3b002a49d4
gnu: r-annotationhub: Update to 2.22.1.
...
* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.22.1.
2021-05-04 09:47:36 +02:00
8ddbf984a2
gnu: r-future-apply: Set HOME directory variable.
...
* gnu/packages/cran.scm (r-future-apply)[arguments]: Add phase "set-HOME".
2021-05-04 09:47:36 +02:00
553767d02a
gnu: r-matrixstats: Set HOME directory variable.
...
* gnu/packages/statistics.scm (r-matrixstats)[arguments]: Add phase
"set-HOME".
2021-05-04 09:47:32 +02:00
ec4012c582
gnu: sequoia: Update to 1.1.0.
...
* gnu/packages/sequoia.scm (sequoia): Update to 1.1.0. [arguments]: Remove
phase "package", add phases "fix-rand-dependency" and "fix-permissions".
2021-05-04 09:44:14 +02:00
145eba0965
gnu: rust: Re-use llvm versions.
...
* gnu/packages/rust.scm (rust-1.35)[inputs]: Don't replace llvm.
(rust-1.38)[inputs]: Same.
(rust-1.44)[inputs]: Switch to llvm-10.
(rust-1.45)[inputs]: Don't replace llvm.
(rust-1.47)[inputs]: Same.
2021-05-04 10:07:35 +03:00
fcd002ccfa
gnu: r-pcapp: Update to 1.9-74.
...
* gnu/packages/statistics.scm (r-pcapp): Update to 1.9-74.
2021-05-04 07:27:51 +02:00
685f173894
gnu: r-sfsmisc: Update to 1.1-11.
...
* gnu/packages/statistics.scm (r-sfsmisc): Update to 1.1-11.
2021-05-04 07:27:51 +02:00
916477772e
gnu: r-tidyselect: Update to 1.1.1.
...
* gnu/packages/statistics.scm (r-tidyselect): Update to 1.1.1.
2021-05-04 07:27:51 +02:00
f5335bffe5
gnu: r-viridislite: Update to 0.4.0.
...
* gnu/packages/statistics.scm (r-viridislite): Update to 0.4.0.
2021-05-04 07:27:51 +02:00
0ad98a178b
gnu: r-viridis: Update to 0.6.0.
...
* gnu/packages/statistics.scm (r-viridis): Update to 0.6.0.
2021-05-04 07:27:51 +02:00
2fbdb15669
gnu: r-r-rsp: Add build phase to set HOME directory.
...
* gnu/packages/statistics.scm (r-r-rsp)[arguments]: Add build phase
"set-HOME".
2021-05-04 07:27:51 +02:00
2eab3898e1
gnu: r-r-cache: Update to 0.15.0.
...
* gnu/packages/statistics.scm (r-r-cache): Update to 0.15.0.
[arguments]: Add build phase "set-HOME".
2021-05-04 07:27:50 +02:00
3ff0d6f797
gnu: r-dt: Update to 0.18.
...
* gnu/packages/statistics.scm (r-dt): Update to 0.18.
2021-05-04 07:27:50 +02:00
45cdf3ad61
gnu: r-segmented: Update to 1.3-4.
...
* gnu/packages/statistics.scm (r-segmented): Update to 1.3-4.
2021-05-04 07:27:50 +02:00
c23b2fac17
gnu: r-rsqlite: Update to 2.2.7.
...
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.2.7.
[propagated-inputs]: Remove r-bh.
2021-05-04 07:27:50 +02:00
e94cf411f0
gnu: r-bitops: Update to 1.0-7.
...
* gnu/packages/statistics.scm (r-bitops): Update to 1.0-7.
2021-05-04 07:27:50 +02:00
866646194c
gnu: r-rcpparmadillo: Update to 0.10.4.0.0.
...
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.10.4.0.0.
2021-05-04 07:27:50 +02:00
883eab3ec6
gnu: r-withr: Update to 2.4.2.
...
* gnu/packages/statistics.scm (r-withr): Update to 2.4.2.
2021-05-04 07:27:50 +02:00
8530eaa5d6
gnu: r-devtools: Update to 2.4.0.
...
* gnu/packages/statistics.scm (r-devtools): Update to 2.4.0.
[propagated-inputs]: Remove r-covr and r-dt; add r-fs and r-lifecycle.
2021-05-04 07:27:50 +02:00
2666871c1b
gnu: r-openssl: Update to 1.4.4.
...
* gnu/packages/statistics.scm (r-openssl): Update to 1.4.4.
2021-05-04 07:27:50 +02:00
23a4436daf
gnu: r-tibble: Update to 3.1.1.
...
* gnu/packages/statistics.scm (r-tibble): Update to 3.1.1.
2021-05-04 07:27:50 +02:00
5c45c5adfa
gnu: r-rlang: Update to 0.4.11.
...
* gnu/packages/statistics.scm (r-rlang): Update to 0.4.11.
2021-05-04 07:27:50 +02:00
fe41452faf
gnu: r-knitr: Update to 1.33.
...
* gnu/packages/statistics.scm (r-knitr): Update to 1.33.
2021-05-04 07:27:50 +02:00
dfafea7951
gnu: r-highr: Update to 0.9.
...
* gnu/packages/statistics.scm (r-highr): Update to 0.9.
[propagated-inputs]: Add r-xfun.
2021-05-04 07:27:50 +02:00
d1f236045b
gnu: r-formatr: Update to 1.9.
...
* gnu/packages/statistics.scm (r-formatr): Update to 1.9.
2021-05-04 07:27:50 +02:00
321fc2e752
gnu: r-survival: Update to 3.2-11.
...
* gnu/packages/statistics.scm (r-survival): Update to 3.2-11.
2021-05-04 07:27:50 +02:00
db1323aaa8
gnu: r-spatial: Update to 7.3-14.
...
* gnu/packages/statistics.scm (r-spatial): Update to 7.3-14.
2021-05-04 07:27:50 +02:00
9015ae66d3
gnu: r-nnet: Update to 7.3-16.
...
* gnu/packages/statistics.scm (r-nnet): Update to 7.3-16.
2021-05-04 07:27:49 +02:00
88bf883bc5
gnu: r-mgcv: Update to 1.8-35.
...
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-35.
2021-05-04 07:27:49 +02:00
9042db14b9
gnu: r-lattice: Update to 0.20-44.
...
* gnu/packages/statistics.scm (r-lattice): Update to 0.20-44.
2021-05-04 07:27:49 +02:00
50c7032eef
gnu: r-kernsmooth: Update to 2.23-20.
...
* gnu/packages/statistics.scm (r-kernsmooth): Update to 2.23-20.
2021-05-04 07:27:49 +02:00
27e873a5e3
gnu: r-cluster: Update to 2.1.2.
...
* gnu/packages/statistics.scm (r-cluster): Update to 2.1.2.
2021-05-04 07:27:49 +02:00
01f58c6270
gnu: r-class: Update to 7.3-19.
...
* gnu/packages/statistics.scm (r-class): Update to 7.3-19.
2021-05-04 07:27:49 +02:00
73efca4064
gnu: r-mass: Update to 7.3-54.
...
* gnu/packages/statistics.scm (r-mass): Update to 7.3-54.
2021-05-04 07:27:49 +02:00
3cf8eab28f
gnu: r-boot: Update to 1.3-28.
...
* gnu/packages/statistics.scm (r-boot): Update to 1.3-28.
2021-05-04 07:27:49 +02:00
43a2eaad02
gnu: r-mlr3misc: Update to 0.9.1.
...
* gnu/packages/cran.scm (r-mlr3misc): Update to 0.9.1.
2021-05-04 07:27:49 +02:00
065f3eac48
gnu: r-phangorn: Update to 2.7.0.
...
* gnu/packages/cran.scm (r-phangorn): Update to 2.7.0.
2021-05-04 07:27:49 +02:00
9788d909ca
gnu: r-tidymodels: Update to 0.1.3.
...
* gnu/packages/cran.scm (r-tidymodels): Update to 0.1.3.
[propagated-inputs]: Remove r-magrittr; add r-conflicted and r-workflowsets.
2021-05-04 07:27:49 +02:00
039c652a94
gnu: r-tidytext: Update to 0.3.1.
...
* gnu/packages/cran.scm (r-tidytext): Update to 0.3.1.
2021-05-04 07:27:49 +02:00
0a7a9fd6a1
gnu: r-workflowsets: Update to 0.0.2.
...
* gnu/packages/cran.scm (r-workflowsets): Update to 0.0.2.
[propagated-inputs]: Add r-generics.
2021-05-04 07:27:49 +02:00
d14100cfea
gnu: r-tune: Update to 0.1.5.
...
* gnu/packages/cran.scm (r-tune): Update to 0.1.5.
2021-05-04 07:27:49 +02:00
62824117c0
gnu: r-exactranktests: Update to 0.8-32.
...
* gnu/packages/cran.scm (r-exactranktests): Update to 0.8-32.
2021-05-04 07:27:49 +02:00
205a03eb2c
gnu: r-transphylo: Update to 1.4.5.
...
* gnu/packages/cran.scm (r-transphylo): Update to 1.4.5.
2021-05-04 07:27:49 +02:00
7fb817783d
gnu: r-muhaz: Update to 1.2.6.4.
...
* gnu/packages/cran.scm (r-muhaz): Update to 1.2.6.4.
2021-05-04 07:27:49 +02:00
278a60cd56
gnu: r-clusterr: Update to 1.2.3.
...
* gnu/packages/cran.scm (r-clusterr): Update to 1.2.3.
2021-05-04 07:27:48 +02:00
81e94675ff
gnu: r-spatstat-core: Update to 2.1-2.
...
* gnu/packages/cran.scm (r-spatstat-core): Update to 2.1-2.
2021-05-04 07:27:48 +02:00
09a0040397
gnu: r-spatstat-geom: Update to 2.1-0.
...
* gnu/packages/cran.scm (r-spatstat-geom): Update to 2.1-0.
2021-05-04 07:27:48 +02:00
c5abf83937
gnu: r-lightgbm: Update to 3.2.1.
...
* gnu/packages/cran.scm (r-lightgbm): Update to 3.2.1.
2021-05-04 07:27:48 +02:00
7ac6dd6403
gnu: r-scatterpie: Update to 0.1.6.
...
* gnu/packages/cran.scm (r-scatterpie): Update to 0.1.6.
2021-05-04 07:27:48 +02:00
73f7bcf280
gnu: r-bridgesampling: Update to 1.1-2.
...
* gnu/packages/cran.scm (r-bridgesampling): Update to 1.1-2.
2021-05-04 07:27:48 +02:00
d7cdf463e9
gnu: r-keyring: Update to 1.2.0.
...
* gnu/packages/cran.scm (r-keyring): Update to 1.2.0.
[propagated-inputs]: Remove r-getpass; add r-askpass.
2021-05-04 07:27:48 +02:00
df9774306a
gnu: r-rsconnect: Update to 0.8.17.
...
* gnu/packages/cran.scm (r-rsconnect): Update to 0.8.17.
2021-05-04 07:27:48 +02:00
6d2b288e24
gnu: r-tam: Update to 3.6-45.
...
* gnu/packages/cran.scm (r-tam): Update to 3.6-45.
2021-05-04 07:27:48 +02:00
2dc5918ef9
gnu: r-bdgraph: Update to 2.64.
...
* gnu/packages/cran.scm (r-bdgraph): Update to 2.64.
2021-05-04 07:27:48 +02:00
094341c4bf
gnu: r-openmx: Update to 2.19.5.
...
* gnu/packages/cran.scm (r-openmx): Update to 2.19.5.
2021-05-04 07:27:48 +02:00
ecba34b7d1
gnu: r-rpf: Update to 1.0.7.
...
* gnu/packages/cran.scm (r-rpf): Update to 1.0.7.
2021-05-04 07:27:48 +02:00
ee70707e99
gnu: r-rsvg: Update to 2.1.2.
...
* gnu/packages/cran.scm (r-rsvg): Update to 2.1.2.
2021-05-04 07:27:48 +02:00
5aa13eeb6d
gnu: r-qqman: Update to 0.1.8.
...
* gnu/packages/cran.scm (r-qqman): Update to 0.1.8.
[native-inputs]: Add r-knitr.
2021-05-04 07:27:48 +02:00
570a872ad8
gnu: r-anthropometry: Update to 1.15.
...
* gnu/packages/cran.scm (r-anthropometry): Update to 1.15.
2021-05-04 07:27:48 +02:00
9c6148d3e5
gnu: r-adagio: Update to 0.8.4.
...
* gnu/packages/cran.scm (r-adagio): Update to 0.8.4.
[propagated-inputs]: Add r-lpsolve.
[native-inputs]: Remove gfortran.
2021-05-04 07:27:48 +02:00
12d5937160
gnu: r-qgam: Update to 1.3.3.
...
* gnu/packages/cran.scm (r-qgam): Update to 1.3.3.
2021-05-04 07:27:48 +02:00
eda03d2462
gnu: r-emojifont: Update to 0.5.5.
...
* gnu/packages/cran.scm (r-emojifont): Update to 0.5.5.
[native-inputs]: Add r-knitr.
2021-05-04 07:27:47 +02:00
deb085d8bc
gnu: r-parameters: Update to 0.13.0.
...
* gnu/packages/cran.scm (r-parameters): Update to 0.13.0.
2021-05-04 07:27:47 +02:00
d25069df0b
gnu: r-terra: Update to 1.2-5.
...
* gnu/packages/cran.scm (r-terra): Update to 1.2-5.
2021-05-04 07:27:47 +02:00
8bf6516ff9
gnu: r-xgboost: Update to 1.4.1.1.
...
* gnu/packages/cran.scm (r-xgboost): Update to 1.4.1.1.
[propagated-inputs]: Add r-jsonlite.
2021-05-04 07:27:47 +02:00
e0121c91fd
gnu: r-ingredients: Update to 2.2.0.
...
* gnu/packages/cran.scm (r-ingredients): Update to 2.2.0.
2021-05-04 07:27:47 +02:00
4cfd543cc1
gnu: r-dqrng: Update to 0.3.0.
...
* gnu/packages/cran.scm (r-dqrng): Update to 0.3.0.
[native-inputs]: Add r-knitr.
2021-05-04 07:27:47 +02:00
aca781b9a4
gnu: r-clue: Update to 0.3-59.
...
* gnu/packages/cran.scm (r-clue): Update to 0.3-59.
2021-05-04 07:27:47 +02:00
abc63422de
gnu: r-ggplotify: Update to 0.0.6.
...
* gnu/packages/cran.scm (r-ggplotify): Update to 0.0.6.
2021-05-04 07:27:47 +02:00
da1f80f1e1
gnu: r-svmisc: Update to 1.1.4.
...
* gnu/packages/cran.scm (r-svmisc): Update to 1.1.4.
[native-inputs]: Add r-knitr.
2021-05-04 07:27:47 +02:00
5d670caf8f
gnu: r-rjava: Update to 1.0-4.
...
* gnu/packages/cran.scm (r-rjava): Update to 1.0-4.
[inputs]: Remove pcre.
2021-05-04 07:27:47 +02:00
8b5eeb9f96
gnu: r-bookdown: Update to 0.22.
...
* gnu/packages/cran.scm (r-bookdown): Update to 0.22.
2021-05-04 07:27:47 +02:00
bacfd45f67
gnu: r-pegas: Update to 1.0.
...
* gnu/packages/cran.scm (r-pegas): Update to 1.0.
2021-05-04 07:27:47 +02:00
4ab5855f39
gnu: r-rsvd: Update to 1.0.5.
...
* gnu/packages/cran.scm (r-rsvd): Update to 1.0.5.
2021-05-04 07:27:47 +02:00
e2a1a68e60
gnu: r-future: Add build phase to set HOME directory.
...
* gnu/packages/cran.scm (r-future)[arguments]: Add build phase "set-HOME".
2021-05-04 07:27:47 +02:00
1b7948536b
gnu: r-parallelly: Update to 1.25.0.
...
* gnu/packages/cran.scm (r-parallelly): Update to 1.25.0.
2021-05-04 07:27:47 +02:00
8c89cc7edb
gnu: r-listenv: Add phase to set HOME directory.
...
* gnu/packages/cran.scm (r-listenv)[arguments]: Add build phase "set-HOME".
2021-05-04 07:27:47 +02:00
2ac230527b
gnu: r-rmpfr: Update to 0.8-4.
...
* gnu/packages/cran.scm (r-rmpfr): Update to 0.8-4.
2021-05-04 07:27:47 +02:00
81e81183a6
gnu: r-ouch: Update to 2.16.
...
* gnu/packages/cran.scm (r-ouch): Update to 2.16.
2021-05-04 07:27:46 +02:00
fbe71c6c90
gnu: r-rgl: Update to 0.106.8.
...
* gnu/packages/cran.scm (r-rgl): Update to 0.106.8.
2021-05-04 07:27:46 +02:00
75a461aa74
gnu: r-rcppparallel: Update to 5.1.3.
...
* gnu/packages/cran.scm (r-rcppparallel): Update to 5.1.3.
2021-05-04 07:27:46 +02:00
3dbd04d7ca
gnu: r-gh: Update to 1.3.0.
...
* gnu/packages/cran.scm (r-gh): Update to 1.3.0.
2021-05-04 07:27:46 +02:00
47a15ac7d0
gnu: r-ggeffects: Update to 1.1.0.
...
* gnu/packages/cran.scm (r-ggeffects): Update to 1.1.0.
2021-05-04 07:27:46 +02:00
363a669276
gnu: r-performance: Update to 0.7.1.
...
* gnu/packages/cran.scm (r-performance): Update to 0.7.1.
2021-05-04 07:27:46 +02:00
787a0b26e1
gnu: r-bayestestr: Update to 0.9.0.
...
* gnu/packages/cran.scm (r-bayestestr): Update to 0.9.0.
2021-05-04 07:27:46 +02:00
da20f1f0b2
gnu: r-tmb: Update to 1.7.20.
...
* gnu/packages/cran.scm (r-tmb): Update to 1.7.20.
2021-05-04 07:27:46 +02:00
3e4baacd91
gnu: r-emmeans: Update to 1.6.0.
...
* gnu/packages/cran.scm (r-emmeans): Update to 1.6.0.
2021-05-04 07:27:46 +02:00
795516ff57
gnu: r-multcomp: Update to 1.4-17.
...
* gnu/packages/cran.scm (r-multcomp): Update to 1.4-17.
2021-05-04 07:27:46 +02:00
94080fc0aa
gnu: r-magick: Update to 2.7.2.
...
* gnu/packages/cran.scm (r-magick): Update to 2.7.2.
2021-05-04 07:27:46 +02:00
799e6b1b20
gnu: r-svdialogs: Update to 1.0.3.
...
* gnu/packages/cran.scm (r-svdialogs): Update to 1.0.3.
[native-inputs]: Add r-knitr.
2021-05-04 07:27:46 +02:00
c4300dc298
gnu: r-svgui: Update to 1.0.1.
...
* gnu/packages/cran.scm (r-svgui): Update to 1.0.1.
[native-inputs]: Add r-knitr.
2021-05-04 07:27:46 +02:00
0ef00dd7f6
gnu: r-raster: Update to 3.4-10.
...
* gnu/packages/cran.scm (r-raster): Update to 3.4-10.
2021-05-04 07:27:46 +02:00
ea359fb92f
gnu: r-doby: Update to 4.6.10.
...
* gnu/packages/cran.scm (r-doby): Update to 4.6.10.
[propagated-inputs]: Add r-curry and r-microbenchmark.
2021-05-04 07:27:46 +02:00
b30b025c6f
gnu: r-writexl: Update to 1.4.0.
...
* gnu/packages/cran.scm (r-writexl): Update to 1.4.0.
2021-05-04 07:27:45 +02:00
2f88711ce3
gnu: r-flextable: Update to 0.6.5.
...
* gnu/packages/cran.scm (r-flextable): Update to 0.6.5.
2021-05-04 07:27:45 +02:00
8067bcdf53
gnu: r-entropy: Update to 1.3.0.
...
* gnu/packages/cran.scm (r-entropy): Update to 1.3.0.
2021-05-04 07:27:45 +02:00
070b766127
gnu: r-brglm: Update to 0.7.2.
...
* gnu/packages/cran.scm (r-brglm): Update to 0.7.2.
2021-05-04 07:27:45 +02:00
d11b3f575f
gnu: r-rbibutils: Update to 2.1.1.
...
* gnu/packages/cran.scm (r-rbibutils): Update to 2.1.1.
2021-05-04 07:27:45 +02:00
58327ba184
gnu: r-reticulate: Update to 1.20.
...
* gnu/packages/cran.scm (r-reticulate): Update to 1.20.
[propagated-inputs]: Add r-png and r-withr.
2021-05-04 07:27:45 +02:00
c2cc32c88a
gnu: r-rastervis: Update to 0.50.2.
...
* gnu/packages/cran.scm (r-rastervis): Update to 0.50.2.
2021-05-04 07:27:45 +02:00
0161d0bcf0
gnu: r-later: Update to 1.2.0.
...
* gnu/packages/cran.scm (r-later): Update to 1.2.0.
[propagated-inputs]: Remove r-bh.
2021-05-04 07:27:45 +02:00
22778956e8
gnu: r-parsedate: Update to 1.2.1.
...
* gnu/packages/cran.scm (r-parsedate): Update to 1.2.1.
2021-05-04 07:27:45 +02:00
f65d223eec
gnu: r-pillar: Update to 1.6.0.
...
* gnu/packages/cran.scm (r-pillar): Update to 1.6.0.
2021-05-04 07:27:45 +02:00
329bd33fb8
gnu: r-vctrs: Update to 0.3.8.
...
* gnu/packages/cran.scm (r-vctrs): Update to 0.3.8.
2021-05-04 07:27:45 +02:00
13ec1ba40c
gnu: r-processx: Update to 3.5.2.
...
* gnu/packages/cran.scm (r-processx): Update to 3.5.2.
2021-05-04 07:27:45 +02:00
b7d7add1ad
gnu: r-cli: Update to 2.5.0.
...
* gnu/packages/cran.scm (r-cli): Update to 2.5.0.
2021-05-04 07:27:45 +02:00
57273b958c
gnu: r-hardyweinberg: Update to 1.7.2.
...
* gnu/packages/cran.scm (r-hardyweinberg): Update to 1.7.2.
2021-05-04 07:27:45 +02:00
df5518d5fa
gnu: r-recipes: Update to 0.1.16.
...
* gnu/packages/cran.scm (r-recipes): Update to 0.1.16.
[propagated-inputs]: Add r-ellipsis.
2021-05-04 07:27:45 +02:00
cf712682cc
gnu: r-inum: Update to 1.0-4.
...
* gnu/packages/cran.scm (r-inum): Update to 1.0-4.
2021-05-04 07:27:45 +02:00
3008d477b5
gnu: r-pkgload: Update to 1.2.1.
...
* gnu/packages/cran.scm (r-pkgload): Update to 1.2.1.
[propagated-inputs]: Remove r-pkgbuild.
2021-05-04 07:27:44 +02:00
b840705278
gnu: r-ape: Update to 5.5.
...
* gnu/packages/cran.scm (r-ape): Update to 5.5.
2021-05-04 07:27:44 +02:00
c6c214e3a3
gnu: r-haven: Update to 2.4.1.
...
* gnu/packages/cran.scm (r-haven): Update to 2.4.1.
[propagated-inputs]: Remove r-rcpp; add r-cpp11.
2021-05-04 07:27:44 +02:00
f8203363a7
gnu: r-jquerylib: Update to 0.1.4.
...
* gnu/packages/cran.scm (r-jquerylib): Update to 0.1.4.
[source]: Update snippet.
[arguments]: Update build phase "process-javascript".
2021-05-04 07:27:44 +02:00
7e3542600d
gnu: r-curl: Update to 4.3.1.
...
* gnu/packages/cran.scm (r-curl): Update to 4.3.1.
[native-inputs]: Add r-knitr.
2021-05-04 07:27:44 +02:00
9afef02ebd
gnu: r-servr: Update to 0.22.
...
* gnu/packages/cran.scm (r-servr): Update to 0.22.
2021-05-04 07:27:44 +02:00
912a8a2ece
gnu: r-httpuv: Update to 1.6.0.
...
* gnu/packages/cran.scm (r-httpuv): Update to 1.6.0.
[propagated-inputs]: Remove r-bh.
2021-05-04 07:27:44 +02:00
2e59bab732
gnu: r-callr: Update to 3.7.0.
...
* gnu/packages/cran.scm (r-callr): Update to 3.7.0.
2021-05-04 07:27:44 +02:00
2a5c02e172
gnu: r-tidyverse: Update to 1.3.1.
...
* gnu/packages/cran.scm (r-tidyverse): Update to 1.3.1.
[propagated-inputs]: Add r-dtplyr, r-googledrive, and r-googlesheets4.
[native-inputs]: Add r-knitr.
2021-05-04 07:27:44 +02:00
9aa1bde3b1
gnu: r-shadowtext: Update to 0.0.8.
...
* gnu/packages/cran.scm (r-shadowtext): Update to 0.0.8.
2021-05-04 07:27:44 +02:00
b9c5f17d23
gnu: r-mboost: Update to 2.9-5.
...
* gnu/packages/cran.scm (r-mboost): Update to 2.9-5.
2021-05-04 07:27:44 +02:00
a297fc6f74
gnu: r-ellipsis: Update to 0.3.2.
...
* gnu/packages/cran.scm (r-ellipsis): Update to 0.3.2.
2021-05-04 07:27:44 +02:00
e68e3f68a5
gnu: r-v8: Update to 3.4.2.
...
* gnu/packages/cran.scm (r-v8): Update to 3.4.2.
[inputs]: Add zlib.
2021-05-04 07:27:44 +02:00
14356d23be
gnu: r-brio: Update to 1.1.2.
...
* gnu/packages/cran.scm (r-brio): Update to 1.1.2.
2021-05-04 07:27:44 +02:00
6c07e74106
gnu: Add r-curry.
...
* gnu/packages/cran.scm (r-curry): New variable.
2021-05-04 07:27:44 +02:00
946f1608ae
gnu: Add r-googlesheets4.
...
* gnu/packages/cran.scm (r-googlesheets4): New variable.
2021-05-04 07:27:44 +02:00
4c2826df65
gnu: Add r-ids.
...
* gnu/packages/cran.scm (r-ids): New variable.
2021-05-04 07:27:44 +02:00
11108a9ab4
gnu: Add r-googledrive.
...
* gnu/packages/cran.scm (r-googledrive): New variable.
2021-05-04 07:27:43 +02:00
fadf5765c1
gnu: Add r-dtplyr.
...
* gnu/packages/cran.scm (r-dtplyr): New variable.
2021-05-04 07:27:43 +02:00
8a3766e1d3
gnu: Add r-conflicted.
...
* gnu/packages/cran.scm (r-conflicted): New variable.
2021-05-04 07:27:43 +02:00
aa9a94bba9
gnu: r-abn: Update to 2.5-0.
...
* gnu/packages/cran.scm (r-abn): Move from here...
* gnu/packages/bioconductor.scm (r-abn): ...to here; update to 2.5-0.
[propagated-inputs]: Add r-rgraphviz.
2021-05-04 07:27:43 +02:00
d260bd51b5
gnu: emacs-yasnippet-snippets: Update to 0.24.
...
* gnu/packages/emacs-xyz.scm (emacs-yasnippet-snippets): Update to 0.24.
[propagated-inputs]: Remove emacs-s.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-04 01:05:23 +02:00
8a934d856f
gnu: emacs-rg: Update to 2.0.3.
...
* gnu/packages/emacs-xyz.scm (emacs-rg): Update to 2.0.3.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-04 01:03:58 +02:00
3f90245d91
gnu: emacs-org-roam: Update to 1.2.4.
...
* gnu/packages/emacs-xyz.scm (emacs-org-roam): Update to 1.2.4.
[native-inputs]: Add texinfo.
[arguments]: Install image and Texinfo documentation.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-04 01:02:32 +02:00
1d5560494b
gnu: chess: Fix paths in installed shell scripts.
...
* gnu/packages/games.scm (chess)[arguments]: Add a 'fix-shell-scripts phase.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-04 00:59:40 +02:00
cc7c1f904e
gnu: Add julia-gumbo.
...
* gnu/packages/julia-xyz.scm (julia-gumbo): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-03 23:10:02 +02:00
74a7bb81f9
gnu: Add julia-gumbo-jll.
...
* gnu/packages/julia-xyz.scm (julia-gumbo-jll): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-03 23:10:02 +02:00
64c1c49787
gnu: Add julia-abstracttrees.
...
* gnu/packages/julia-xyz.scm (julia-abstracttrees): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-03 23:10:02 +02:00
cd95cb287e
gnu: Add git-filter-repo.
...
* gnu/packages/version-control.scm (git-filter-repo): New variable.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2021-05-03 23:10:01 +02:00
817f40d0ac
gnu: git: add a comment on why we don't build manpages
...
* gnu/packages/version-control.scm (git)[native-inputs]:
add back comment skipped by commit
d1cada0450
2021-05-03 23:10:01 +02:00
71a4e26093
gnu: python-asdf: Update to 2.7.4.
...
* gnu/packages/astronomy.scm (python-asdf): Update to 2.7.4.
2021-05-03 22:27:30 +02:00
6332ad5470
gnu: dico: Omit static libraries.
...
* gnu/packages/dico.scm (dico)[arguments]: Add ‘--disable-static’ to
the #:configure-flags.
2021-05-03 22:27:30 +02:00
dbfe885e11
gnu: dico: Update to 2.11.
...
* gnu/packages/dico.scm (dico): Update to 2.11.
2021-05-03 22:27:30 +02:00
6e43922f35
gnu: oath-toolkit: Update to 2.6.7.
...
* gnu/packages/authentication.scm (oath-toolkit): Update to 2.6.7.
2021-05-03 22:23:59 +02:00
2c09755a7a
gnu: vcsh: Update to 1.20190621.
...
* gnu/packages/version-control.scm (vcsh): Update to 1.20190621.
[arguments]: Add an 'install-bash-completion phase.
Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2021-05-03 22:23:59 +02:00
9ffa81fe64
gnu: blender: Update to 2.92.0.
...
* gnu/packages/graphics.scm (blender): Update to 2.92.0.
[arguments]: Set the NumPy header include path in #:configure-flags.
Signed-off-by: Leo Famulari <leo@famulari.name>
2021-05-03 13:04:55 -04:00
88156c603a
gnu: public-inbox: Update to 1.6.1.
...
* gnu/packages/mail.scm (public-inbox)[version]: Update to 1.6.1.
[inputs]: Add optional dependencies. ‘perl-filesys-notify-simple’ has been
superseded by ‘perl-linux-inotify2’ by upstream.
[synopsis]: Capitalize “git”.
[description]: Likewise. Mention IMAP support.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-03 18:26:50 +02:00
66f309a553
gnu: Add perl-linux-inotify2.
...
* gnu/packages/perl.scm (perl-linux-inotify2): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-03 18:26:50 +02:00
319e0e0aeb
gnu: odamex: Update to 0.9.0.
...
* gnu/packages/games.scm (odamex): Update to 0.9.0.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-03 18:26:50 +02:00
36252dff9b
gnu: octave, octave-cli: Explain difference.
...
* gnu/packages/maths.scm (octave-cli, octave): Extended synopsis.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-03 18:26:49 +02:00
62b4cc14f8
gnu: chessx: Disable online version check by default.
...
* gnu/packages/games.scm (chessx)[arguments]: Add phase to disable
the online version check by default.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-03 18:26:49 +02:00
8e637fb548
gnu: git-modes: Update to 1.3.0.
...
* gnu/packages/emacs-xyz.scm (git-modes): Update to 1.3.0.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-03 18:26:49 +02:00
fa7dc25c2f
gnu: pioneers: Patch path to beep.
...
Fixes <https://issues.guix.gnu.org/47131 >
* gnu/packages/games.scm (pioneers): Patch path to beep.
[inputs]: Add beep.
[arguments]: Add phase patch-beep-path.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-03 18:26:49 +02:00
55b6e1a7ad
gnu: xboard: Patch path to aplay.
...
Fixes <http://issues.guix.gnu.org/47195 >.
* gnu/packages/games.scm (xboard): Patch path to aplay.
[inputs]: Add alsa-utils.
[arguments]: Add phase patch-aplay-path.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-03 18:26:49 +02:00
Marius Bakke
Ludovic Courtès
Xinglu Chen
Raghav Gururajan
Mike Gerwitz
Philip McGrath
Vinicius Monego
Stefan Reichör
Simon Josefsson
Michael Rohleder
Ricardo Wurmus
Arun Isaac
Ron Nazarov
Tobias Geerinckx-Rice
Roel Janssen
Leo Famulari
Guillaume Le Vaillant
Sharlatan Hellseher
Hartmut Goebel
Efraim Flashner
nixo
François J
raingloom
David Pflug
Konrad Hinsen