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52028 Commits (4ada4fb7453fbad4fb5acf90d966e111e6dda237)

Author SHA1 Message Date
Ricardo Wurmus 4ada4fb745
gnu: r-delayedarray: Update to 0.12.0. 
* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.12.0.
 2019-12-15 15:39:02 +01:00
Ricardo Wurmus 264db038c6
gnu: r-summarizedexperiment: Update to 1.16.0. 
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.16.0.
 2019-12-15 15:39:02 +01:00
Ricardo Wurmus 55e515d206
gnu: r-genomicalignments: Update to 1.22.1. 
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.22.1.
 2019-12-15 15:39:01 +01:00
Ricardo Wurmus 15187da9e7
gnu: r-rtracklayer: Update to 1.46.0. 
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.46.0.
 2019-12-15 15:39:01 +01:00
Ricardo Wurmus 9fec340391
gnu: r-genomicfeatures: Update to 1.38.0. 
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.38.0.
 2019-12-15 15:39:01 +01:00
Ricardo Wurmus 323f42b2ca
gnu: r-topgo: Update to 2.37.0. 
* gnu/packages/bioinformatics.scm (r-topgo): Update to 2.37.0.
 2019-12-15 15:39:01 +01:00
Ricardo Wurmus e3a2b96c80
gnu: r-bsgenome: Update to 1.54.0. 
* gnu/packages/bioinformatics.scm (r-bsgenome): Update to 1.54.0.
 2019-12-15 15:39:01 +01:00
Ricardo Wurmus bca1c45e4e
gnu: r-impute: Update to 1.60.0. 
* gnu/packages/bioinformatics.scm (r-impute): Update to 1.60.0.
 2019-12-15 15:39:01 +01:00
Ricardo Wurmus b590742362
gnu: r-seqpattern: Update to 1.18.0. 
* gnu/packages/bioinformatics.scm (r-seqpattern): Update to 1.18.0.
 2019-12-15 15:39:01 +01:00
Ricardo Wurmus e06b34e8c6
gnu: r-genomation: Update to 1.18.0. 
* gnu/packages/bioinformatics.scm (r-genomation): Update to 1.18.0.
 2019-12-15 15:39:01 +01:00
Ricardo Wurmus a9790190d1
gnu: r-seqlogo: Update to 1.52.0. 
* gnu/packages/bioinformatics.scm (r-seqlogo): Update to 1.52.0.
 2019-12-15 15:39:01 +01:00
Ricardo Wurmus a5f9b30338
gnu: r-motifrg: Update to 1.30.0. 
* gnu/packages/bioinformatics.scm (r-motifrg): Update to 1.30.0.
 2019-12-15 15:39:01 +01:00
Ricardo Wurmus 2f15045400
gnu: r-zlibbioc: Update to 1.32.0. 
* gnu/packages/bioinformatics.scm (r-zlibbioc): Update to 1.32.0.
 2019-12-15 15:39:01 +01:00
Ricardo Wurmus 108c03a8eb
gnu: r-rhtslib: Update to 1.18.0. 
* gnu/packages/bioinformatics.scm (r-rhtslib): Update to 1.18.0.
[propagated-inputs]: Add curl.
 2019-12-15 15:39:01 +01:00
Ricardo Wurmus 7b6c008960
gnu: r-bamsignals: Update to 1.18.0. 
* gnu/packages/bioinformatics.scm (r-bamsignals): Update to 1.18.0.
 2019-12-15 15:39:00 +01:00
Ricardo Wurmus f375d74072
gnu: r-rcas: Update to 1.12.0. 
* gnu/packages/bioinformatics.scm (r-rcas): Update to 1.12.0.
 2019-12-15 15:39:00 +01:00
Ricardo Wurmus 3964f2c24e
gnu: r-mutationalpatterns: Update to 1.12.0. 
* gnu/packages/bioinformatics.scm (r-mutationalpatterns): Update to 1.12.0.
 2019-12-15 15:39:00 +01:00
Ricardo Wurmus 3a0229eba0
gnu: r-tximport: Update to 1.14.0. 
* gnu/packages/bioinformatics.scm (r-tximport): Update to 1.14.0.
 2019-12-15 15:39:00 +01:00
Ricardo Wurmus 126539d1ae
gnu: r-rhdf5: Update to 2.30.1. 
* gnu/packages/bioinformatics.scm (r-rhdf5): Update to 2.30.1.
 2019-12-15 15:39:00 +01:00
Ricardo Wurmus 4e5c217684
gnu: r-pcamethods: Update to 1.78.0. 
* gnu/packages/bioinformatics.scm (r-pcamethods): Update to 1.78.0.
 2019-12-15 15:39:00 +01:00
Ricardo Wurmus 589939937d
gnu: r-msnbase: Update to 2.12.0. 
* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.12.0.
 2019-12-15 15:39:00 +01:00
Ricardo Wurmus 597aeb8a34
gnu: r-msnid: Update to 1.20.0. 
* gnu/packages/bioinformatics.scm (r-msnid): Update to 1.20.0.
 2019-12-15 15:39:00 +01:00
Ricardo Wurmus 3ccf1e3c20
gnu: r-aroma-light: Update to 3.16.0. 
* gnu/packages/bioinformatics.scm (r-aroma-light): Update to 3.16.0.
 2019-12-15 15:39:00 +01:00
Ricardo Wurmus 783bbe3ace
gnu: r-deseq: Update to 1.38.0. 
* gnu/packages/bioinformatics.scm (r-deseq): Update to 1.38.0.
 2019-12-15 15:39:00 +01:00
Ricardo Wurmus 0a6704e226
gnu: r-edaseq: Update to 2.20.0. 
* gnu/packages/bioinformatics.scm (r-edaseq): Update to 2.20.0.
 2019-12-15 15:38:59 +01:00
Ricardo Wurmus 2beffcb558
gnu: r-interactivedisplaybase: Update to 1.24.0. 
* gnu/packages/bioinformatics.scm (r-interactivedisplaybase): Update to 1.24.0.
 2019-12-15 15:38:59 +01:00
Ricardo Wurmus 6339ea22f1
gnu: r-annotationhub: Update to 2.18.0. 
* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.18.0.
[propagated-inputs]: Add r-biocversion.
 2019-12-15 15:38:59 +01:00
Ricardo Wurmus c21bf901e2
gnu: r-fastseg: Update to 1.32.0. 
* gnu/packages/bioinformatics.scm (r-fastseg): Update to 1.32.0.
 2019-12-15 15:38:59 +01:00
Ricardo Wurmus fedba48bb5
gnu: r-keggrest: Update to 1.26.1. 
* gnu/packages/bioinformatics.scm (r-keggrest): Update to 1.26.1.
 2019-12-15 15:38:59 +01:00
Ricardo Wurmus b342b20a24
gnu: r-gage: Update to 2.36.0. 
* gnu/packages/bioinformatics.scm (r-gage): Update to 2.36.0.
 2019-12-15 15:38:59 +01:00
Ricardo Wurmus 48c7ee93b7
gnu: r-genomicfiles: Update to 1.22.0. 
* gnu/packages/bioinformatics.scm (r-genomicfiles): Update to 1.22.0.
 2019-12-15 15:38:59 +01:00
Ricardo Wurmus dac706c322
gnu: r-complexheatmap: Update to 2.2.0. 
* gnu/packages/bioinformatics.scm (r-complexheatmap): Update to 2.2.0.
 2019-12-15 15:38:59 +01:00
Ricardo Wurmus 2edb116c1c
gnu: r-dirichletmultinomial: Update to 1.28.0. 
* gnu/packages/bioinformatics.scm (r-dirichletmultinomial): Update to 1.28.0.
 2019-12-15 15:38:59 +01:00
Ricardo Wurmus e107f3df54
gnu: r-ensembldb: Update to 2.10.2. 
* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.10.2.
 2019-12-15 15:38:59 +01:00
Ricardo Wurmus e89032667d
gnu: r-organismdbi: Update to 1.28.0. 
* gnu/packages/bioinformatics.scm (r-organismdbi): Update to 1.28.0.
 2019-12-15 15:38:59 +01:00
Ricardo Wurmus 866810e686
gnu: r-biovizbase: Update to 1.34.1. 
* gnu/packages/bioinformatics.scm (r-biovizbase): Update to 1.34.1.
 2019-12-15 15:38:59 +01:00
Ricardo Wurmus 81600df302
gnu: r-ggbio: Update to 1.34.0. 
* gnu/packages/bioinformatics.scm (r-ggbio): Update to 1.34.0.
 2019-12-15 15:38:58 +01:00
Ricardo Wurmus 89a41696ab
gnu: r-gqtlbase: Update to 1.18.0. 
* gnu/packages/bioinformatics.scm (r-gqtlbase): Update to 1.18.0.
 2019-12-15 15:38:58 +01:00
Ricardo Wurmus 67d4fd523d
gnu: r-erma: Update to 1.2.0. 
* gnu/packages/bioinformatics.scm (r-erma): Update to 1.2.0.
 2019-12-15 15:38:58 +01:00
Ricardo Wurmus 14eb0978a8
gnu: r-snpstats: Update to 1.36.0. 
* gnu/packages/bioinformatics.scm (r-snpstats): Update to 1.36.0.
 2019-12-15 15:38:58 +01:00
Ricardo Wurmus 6fff104191
gnu: r-ldblock: Update to 1.16.0. 
* gnu/packages/bioinformatics.scm (r-ldblock): Update to 1.16.0.
[propagated-inputs]: Remove r-go-db and r-homo-sapiens.
 2019-12-15 15:38:58 +01:00
Ricardo Wurmus cfa93a30b4
gnu: r-gqtlstats: Update to 1.18.0. 
* gnu/packages/bioinformatics.scm (r-gqtlstats): Update to 1.18.0.
 2019-12-15 15:38:58 +01:00
Ricardo Wurmus d57b6b4bae
gnu: r-gviz: Update to 1.30.0. 
* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.30.0.
 2019-12-15 15:38:58 +01:00
Ricardo Wurmus 2e13f10e89
gnu: r-sushi: Update to 1.24.0. 
* gnu/packages/bioinformatics.scm (r-sushi): Update to 1.24.0.
 2019-12-15 15:38:58 +01:00
Ricardo Wurmus 28329991b0
gnu: r-gwascat: Update to 2.18.0. 
* gnu/packages/bioinformatics.scm (r-gwascat): Update to 2.18.0.
 2019-12-15 15:38:58 +01:00
Ricardo Wurmus 0a16021241
gnu: r-hitc: Update to 1.30.0. 
* gnu/packages/bioinformatics.scm (r-hitc): Update to 1.30.0.
 2019-12-15 15:38:58 +01:00
Ricardo Wurmus 8db2915900
gnu: r-fithic: Update to 1.12.0. 
* gnu/packages/bioinformatics.scm (r-fithic): Update to 1.12.0.
 2019-12-15 15:38:58 +01:00
Ricardo Wurmus 7557bd0cce
gnu: r-hdf5array: Update to 1.14.1. 
* gnu/packages/bioinformatics.scm (r-hdf5array): Update to 1.14.1.
[propagated-inputs]: Add r-matrix.
 2019-12-15 15:38:57 +01:00
Ricardo Wurmus 1f5d262cfd
gnu: r-rhdf5lib: Update to 1.8.0. 
* gnu/packages/bioinformatics.scm (r-rhdf5lib): Update to 1.8.0.
[arguments]: Update patches.
 2019-12-15 15:38:57 +01:00
Ricardo Wurmus 8804e4b48e
gnu: r-beachmat: Update to 2.2.1. 
* gnu/packages/bioinformatics.scm (r-beachmat): Update to 2.2.1.
[propagated-inputs]: Add r-matrix.
 2019-12-15 15:38:57 +01:00