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60635 Commits (4e9ded6d276bf488593f53a84b6e50771abac13f)

Author SHA1 Message Date
Ludovic Courtès e1bd62eb5c
gnu: slurm: Reintroduce version 19.05.
Partly fixes <https://bugs.gnu.org/44387>.

* gnu/packages/parallel.scm (slurm-19.05): New variable.
2020-11-02 14:59:34 +01:00
Ludovic Courtès c73496f433
gnu: mpich: Configure to use ucx.
Suggested by Maurice Brémond <Maurice.Bremond@inria.fr>.

Fixes bug when running test suites involving MPICH:
<https://issues.guix.gnu.org/39588#15>.

* gnu/packages/mpi.scm (mpich)[arguments]: Pass "--with-device=ch4:ucx".
2020-11-02 14:59:34 +01:00
Pierre Neidhardt 60a9f246fa
gnu: sbcl: Update to 2.0.10.
* gnu/packages/lisp.scm (sbcl): Update to 2.0.10.
2020-11-02 12:24:35 +01:00
Mathieu Othacehe 44daec7fa4
ci: Convert license to text.
This is a follow-up of 7c02eb6c8d.

* gnu/ci.scm (package->alist): Convert license to text.
2020-11-02 10:42:33 +01:00
Mathieu Othacehe 7c02eb6c8d
ci: Ignore package license.
Fixes: <https://issues.guix.gnu.org/44370>.

* gnu/ci.scm (package->alist): Ignore package license.
2020-11-02 10:34:39 +01:00
Michael Rohleder 48b00a4c7e
gnu: stumpish: Fix xprop call.
* gnu/packages/wm.scm (stumpish): Fix xprop call.
[inputs]: Add xprop.
[arguments]: Add substitution of xprop.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2020-11-02 09:59:09 +01:00
Leo Famulari e1f5c2292b
gnu: linux-libre 5.4: Update to 5.4.74.
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.74.
(linux-libre-5.4-pristine-source): Update hash.
2020-11-01 23:33:45 -05:00
Leo Famulari b04736dca8
gnu: linux-libre: Update to 5.9.3.
* gnu/packages/linux.scm (linux-libre-5.9-version): Update to 5.9.3.
(linux-libre-5.9-pristine-source): Update hash.
2020-11-01 23:33:41 -05:00
Miguel Ángel Arruga Vivas bc9e66f0fe
installer: Report to the user the formatted partitions.
* gnu/installer/newt/partitions.scm (define-module): Use (ice-9 format).
(draw-formatting-page): Add parameter partitions and provide the list of
formatted partitions to the user.
(run-partitioning-page): Provide user-partitions to draw-formatting-page.
2020-11-02 03:42:08 +01:00
Ludovic Courtès 8f71305e8f
installer: parted: Internationalize the partition handling code.
* gnu/installer/parted.scm (user-partition-description): Use 'format'
and 'G_' for i18n.
2020-11-01 23:56:29 +01:00
Ludovic Courtès 3ba0563645
gnu: skribilo: Update to 0.9.5.
* gnu/packages/skribilo.scm (skribilo): Update to 0.9.5.
[arguments]: Adjust 'pre-configure' phase to use the right effective
version.
[inputs]: Replace GUILE-2.2 with GUILE-3.0.
[propagated-inputs]: Adjust accordingly.
2020-11-01 23:56:29 +01:00
Arun Isaac 197c1676d3
gnu: avr-toolchain: Replace functions with package variables.
* gnu/packages/avr.scm (avr-gcc-7): Rename to avr-gcc.
(avr-libc): Replace function with variable.
(avr-toolchain): Replace function with variable.
2020-11-02 00:30:59 +05:30
Arun Isaac 5a3827d433
gnu: avr-gcc: Update to 7.5.0.
* gnu/packages/avr.scm (avr-gcc-7, avr-toolchain-7): New variables.
(avr-gcc-4.9, avr-gcc-5, avr-toolchain-4.9, avr-toolchain-5): Delete
variables.
(avr-libc)[arguments]: Remove custom fix-cpath phase.
2020-11-02 00:30:59 +05:30
Brett Gilio 8df89c4793
gnu: emacs-org-roam: Update to 1.2.2.
* gnu/packages/emacs-xyz.scm (emacs-org-roam): Update to 1.2.2.
2020-11-01 12:45:31 -06:00
Tobias Geerinckx-Rice eaae3e114a
gnu: krita: Update to 4.4.1.
* gnu/packages/kde.scm (krita): Update to 4.4.1.
2020-11-01 17:57:01 +01:00
Tobias Geerinckx-Rice a724e898b5
gnu: xfsprogs: Update to 5.9.0.
* gnu/packages/linux.scm (xfsprogs): Update to 5.9.0.
2020-11-01 17:57:01 +01:00
Tobias Geerinckx-Rice 6187e30b39
gnu: konversation: Update to 1.7.7.
* gnu/packages/kde-internet.scm (konversation): Update to 1.7.7.
2020-11-01 17:57:00 +01:00
Tobias Geerinckx-Rice 6e50c11699
gnu: fetchmail: Update to 6.4.13.
* gnu/packages/mail.scm (fetchmail): Update to 6.4.13.
2020-11-01 17:57:00 +01:00
Tobias Geerinckx-Rice 159099d10d
gnu: nftables: Update to 0.9.7.
* gnu/packages/linux.scm (nftables): Update to 0.9.7.
2020-11-01 17:56:59 +01:00
Tobias Geerinckx-Rice ee079952bb
gnu: libnftnl: Update to 1.1.8.
* gnu/packages/linux.scm (libnftnl): Update to 1.1.8.
2020-11-01 17:56:59 +01:00
Tobias Geerinckx-Rice 6547296b9d
gnu: usbutils: Update to 013.
* gnu/packages/linux.scm (usbutils): Update to 013.
[arguments]: Tweak ‘patch-bootstrap-scripts’ phase.
2020-11-01 17:56:59 +01:00
Tobias Geerinckx-Rice 6309f866f2
gnu: ipset: Update to 7.7.
* gnu/packages/linux.scm (ipset): Update to 7.7.
2020-11-01 17:56:58 +01:00
Tobias Geerinckx-Rice d29f0007cb
gnu: iptables: Update to 1.8.6.
* gnu/packages/linux.scm (iptables): Update to 1.8.6.
[arguments]: Remove obsolete #:phases.
2020-11-01 17:56:58 +01:00
Tobias Geerinckx-Rice 4c8a066074
gnu: btrfs-progs: Update to 5.9.
* gnu/packages/linux.scm (btrfs-progs): Update to 5.9.
2020-11-01 17:56:57 +01:00
Tobias Geerinckx-Rice f5503ac742
gnu: nvme-cli: Update to 1.13.
* gnu/packages/linux.scm (nvme-cli): Update to 1.13.
2020-11-01 17:56:57 +01:00
Tobias Geerinckx-Rice 379856813c
gnu: lxtask: Update to 0.1.10.
* gnu/packages/lxde.scm (lxtask): Update to 0.1.10.
2020-11-01 17:56:56 +01:00
Tobias Geerinckx-Rice c5bc3fde80
gnu: wolf-shaper: Update to 0.1.8.
* gnu/packages/music.scm (wolf-shaper): Update to 0.1.8.
2020-11-01 17:56:56 +01:00
Efraim Flashner 0fa9c4374d
gnu: eamcs-windsize: Declare a source file-name.
* gnu/packages/emacs-xyz.scm (emacs-windsize)[source]: Add file-name
field.
2020-11-01 17:00:57 +02:00
Tobias Geerinckx-Rice b3444c7ecd
gnu: yoshimi: Update to 1.7.3.
* gnu/packages/music.scm (yoshimi): Update to 1.7.3.
2020-11-01 14:45:49 +01:00
Tobias Geerinckx-Rice 98e159955a
gnu: blueman: Update to 2.1.4.
* gnu/packages/networking.scm (blueman): Update to 2.1.4.
2020-11-01 14:45:48 +01:00
Tobias Geerinckx-Rice 59baffced7
gnu: qtractor: Update to 0.9.18.
* gnu/packages/music.scm (qtractor): Update to 0.9.18.
2020-11-01 14:45:48 +01:00
Tobias Geerinckx-Rice 83ce5ca9bc
gnu: padthv1: Update to 0.9.18.
* gnu/packages/music.scm (padthv1): Update to 0.9.18.
2020-11-01 14:45:48 +01:00
Tobias Geerinckx-Rice 223abb3f8b
gnu: samplv1: Update to 0.9.18.
* gnu/packages/music.scm (samplv1): Update to 0.9.18.
2020-11-01 14:45:48 +01:00
Tobias Geerinckx-Rice 6c5db0fdb4
gnu: drumkv1: Update to 0.9.18.
* gnu/packages/music.scm (drumkv1): Update to 0.9.18.
2020-11-01 14:45:47 +01:00
Tobias Geerinckx-Rice adc036fe0a
gnu: synthv1: Update to 0.9.18.
* gnu/packages/music.scm (synthv1): Update to 0.9.18.
2020-11-01 14:45:47 +01:00
Tobias Geerinckx-Rice 088526f3bb
gnu: ncmpc: Update to 0.42.
* gnu/packages/mpd.scm (ncmpc): Update to 0.42.
2020-11-01 14:45:47 +01:00
Tobias Geerinckx-Rice 2d9e2267d7
gnu: mpd: Update to 0.22.2.
* gnu/packages/mpd.scm (mpd): Update to 0.22.2.
2020-11-01 14:45:47 +01:00
Tobias Geerinckx-Rice 0886ff913b
gnu: batctl: Update to 2020.4.
* gnu/packages/networking.scm (batctl): Update to 2020.4.
2020-11-01 14:45:47 +01:00
Christopher Baines 5b98944d3d
gnu: ruby-libxml: Fix build.
rdoc fails to install the documentation, so disable rdoc for now, as I'm
unsure how to fix this.

* gnu/packages/ruby.scm (ruby-libxml)[arguments]: Add --no-document
to #:gem-flags.
2020-11-01 13:38:46 +00:00
Carlo Holl e6bfb02eb7
gnu: Add hledger.
* gnu/packages/finance.scm (hledger): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-11-01 13:34:46 +00:00
Carlo Holl d610896870
gnu: Add ghc-hledger-lib.
* gnu/packages/haskell-xyz.scm (ghc-hledger-lib): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-11-01 13:34:46 +00:00
Carlo Holl aa8f40097d
gnu: Add ghc-cassava-megaparsec.
* gnu/packages/haskell-xyz.scm (ghc-cassava-megaparsec): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-11-01 13:34:46 +00:00
Carlo Holl 1748f1b80a
gnu: Add ghc-cassava.
* gnu/packages/haskell-xyz.scm (ghc-cassava): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-11-01 13:34:46 +00:00
Carlo Holl f2a8aea14c
gnu: Add ghc-wizards.
* gnu/packages/haskell-xyz.scm (ghc-wizards): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-11-01 13:34:46 +00:00
Carlo Holl 3a09211c1b
gnu: Add ghc-uglymemo.
* gnu/packages/haskell-xyz.scm (ghc-uglymemo): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-11-01 13:34:46 +00:00
Carlo Holl 094a9d7ac4
gnu: Add ghc-tabular.
* gnu/packages/haskell-xyz.scm (ghc-tabular): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-11-01 13:34:45 +00:00
Carlo Holl aeb94a1fad
gnu: Add ghc-text-short.
* gnu/packages/haskell-xyz.scm (ghc-text-short): New variable.
2020-11-01 13:34:45 +00:00
Carlo Holl 21c211337f
gnu: Add ghc-only.
* gnu/packages/haskell-xyz.scm (ghc-only): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-11-01 13:34:45 +00:00
Carlo Holl 27baf2a137
gnu: Add ghc-lucid.
* gnu/packages/haskell-xyz.scm (ghc-lucid): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-11-01 13:34:45 +00:00
Carlo Holl e16f7de88f
gnu: Add ghc-hspec-megaparsec.
* gnu/packages/haskell-xyz.scm (ghc-hspec-megaparsec): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-11-01 13:34:45 +00:00
Carlo Holl 232eab1d30
gnu: ghc-doctest: Update to 0.16.3.
* gnu/packages/haskell-xyz.scm (ghc-doctest): Update to 0.16.3.
[inputs,native-inputs]: Replace with what is generated by guix import.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-11-01 13:34:45 +00:00
Carlo Holl 9b3b327a4a
gnu: Add ghc-decimal.
* gnu/packages/haskell-xyz.scm (ghc-decimal): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-11-01 13:34:44 +00:00
Carlo Holl 0ff9a717f6
gnu: Add ghc-csv.
* gnu/packages/haskell-xyz.scm (ghc-csv): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-11-01 13:34:44 +00:00
Carlo Holl 7f2a565070
gnu: Add ghc-control-monad-free.
* gnu/packages/haskell-xyz.scm (ghc-control-monad-free): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-11-01 13:34:44 +00:00
Tobias Geerinckx-Rice 9e775fa1a9
gnu: git: Update to 2.29.2.
* gnu/packages/version-control.scm (git): Update to 2.29.2.
2020-11-01 14:18:55 +01:00
Tobias Geerinckx-Rice c32bc7fe3b
gnu: tmux: Update to 3.1c.
* gnu/packages/tmux.scm (tmux): Update to 3.1c.
2020-11-01 14:18:55 +01:00
Tobias Geerinckx-Rice 55653859e4
gnu: youtube-dl: Fix hash.
* gnu/packages/video.scm (youtube-dl)[source]: Make hash less wrong.
2020-11-01 14:18:55 +01:00
Tobias Geerinckx-Rice df5fb63385
gnu: nginx-documentation: Update to 1.19.3-2603-3cb2736bb74c.
* gnu/packages/web.scm (nginx-documentation): Update to 1.19.3-2603-3cb2736bb74c.
2020-11-01 13:50:31 +01:00
Tobias Geerinckx-Rice ba1d3451c6
gnu: nginx: Update to 1.19.4.
* gnu/packages/web.scm (nginx): Update to 1.19.4.
2020-11-01 13:50:31 +01:00
Tobias Geerinckx-Rice 2a143b8e23
gnu: snd: Update to 20.8.
* gnu/packages/audio.scm (snd): Update to 20.8.
2020-11-01 13:43:27 +01:00
Tobias Geerinckx-Rice 2ddc43e93d
gnu: thunar: Update to 1.8.16.
* gnu/packages/xfce.scm (thunar): Update to 1.8.16.
2020-11-01 13:43:27 +01:00
Tobias Geerinckx-Rice f8b646b3fd
gnu: youtube-dl: Update to 2020.11.01.1.
* gnu/packages/video.scm (youtube-dl): Update to 2020.11.01.1.
2020-11-01 13:36:18 +01:00
Tobias Geerinckx-Rice 3b20642293
gnu: facter: Update to 4.0.44.
* gnu/packages/admin.scm (facter): Update to 4.0.44.
2020-11-01 13:36:18 +01:00
Tobias Geerinckx-Rice d0e9a2edbc
gnu: wimlib: Update to 1.13.3.
* gnu/packages/backup.scm (wimlib): Update to 1.13.3.
2020-11-01 13:36:17 +01:00
Efraim Flashner 1975baae51
gnu: mdk: Update to 1.3.0.
* gnu/packages/education.scm (mdk): Update to 1.3.0.
[home-page]: Update.
2020-11-01 09:45:37 +02:00
Leo Famulari 97aad938bd
gnu: python-dateparser: Use the test variant of tzdata.
* gnu/packages/python-xyz.scm (python-dateparser)[inputs]: Remove field.
[native-inputs]: Add tzdata-for-tests.
2020-10-31 22:58:57 -04:00
Miguel Ángel Arruga Vivas 582cf9257c
system: Add store-directory-prefix to boot-parameters.
Fixes <http://issues.guix.gnu.org/44196>

* gnu/machine/ssh.scm (roll-back-managed-host): Use
boot-parameters-store-directory-prefix.
* gnu/system.scm (define-module): Export
boot-parameters-store-directory-prefix.
(<boot-parameters>)[store-directory-prefix]: New field. It is used to
generate the correct paths when /gnu/store is installed on a btrfs
subvolume whose name doesn't match the final runtime path, as the
bootloader doesn't have knowledge about the final mounting points.
[boot-parameters-store-directory-prefix]: New accessor.
(read-boot-parameters): Read directory-prefix from store field.
(operating-system-boot-parameters-file): Add directory-prefix to
store field.
* guix/scripts/system.scm (reinstall-bootloader): Use
boot-parameters-store-directory-prefix.
* test/boot-parameters.scm (%default-btrfs-subvolume,
%default-store-directory-prefix): New variables.
(%grub-boot-parameters): Use %default-store-directory-prefix.
(%default-operating-system): Use %default-btrfs-subvolume.
(test-boot-parameters): Add directory-prefix.
(test optional fields): Add test for directory-prefix.
(test os store-directory-prefix): New test.
2020-11-01 02:28:38 +01:00
Miguel Ángel Arruga Vivas f445bc6576
system: Generate grub locale directory for grub.cfg.
* gnu/bootloader/grub.scm (grub-locale-directory): New function.
(grub-configuration-file)[locale-config]: Use grub-locale-directory and
avoid the extra search when eye-candy have performed it.
2020-11-01 01:14:36 +01:00
Tanguy Le Carrour 70876b0793
gnu: httpie: Update to 2.3.0.
* gnu/packages/python-web.scm (httpie): Update to 2.3.0.
[propagated-inputs]: Add python-requests-toolbelt.
[home-page]: Update URL.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-10-31 23:16:44 +01:00
Ryan Prior 1e0c382605
gnu: esbuild: Update to 0.8.0.
* gnu/packages/web.scm (esbuild): Update to 0.8.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-10-31 23:16:44 +01:00
Ludovic Courtès bfe82fe2f6
pack: Relocatable wrapper leaves root available to child processes.
Fixes <https://bugs.gnu.org/44261>.
Reported by Jan Nieuwenhuizen <janneke@gnu.org>.

* gnu/packages/aux-files/run-in-namespace.c (exec_in_user_namespace):
Add call to 'prctl'.  Call 'mount' for NEW_ROOT and define 'is_tmpfs'.
When IS_TMPFS is true, call 'umount' and 'rmdir' after 'waitpid';
otherwise, call 'rm_rf' only when 'waitpid' returns -1 the second time.
(exec_with_loader): Call 'prctl'.  Remove NEW_ROOT only when 'waitpid'
returns -1 the second time, otherwise leave it behind.
* tests/guix-pack-relocatable.sh (wait_for_file): New function.
Add test.
2020-10-31 23:16:43 +01:00
Lars-Dominik Braun 48dec2e04e
gnu: Add python-asyncssh.
* gnu/packages/ssh.scm (python-asyncssh): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-10-31 21:35:20 +00:00
Hendur Saga via Guix-patches via 17bc59898a
gnu: Add xstow.
* gnu/packages/package-management.scm (xstow): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-10-31 21:03:45 +00:00
nixo ce5740043f
gnu: Add font-openmoji
* gnu/packages/fonts.scm (font-openmoji): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-10-31 20:22:20 +00:00
Guillaume Le Vaillant c94367eaaf
gnu: sbcl-geco: Fix build.
* gnu/packages/patches/sbcl-geco-fix-organism-class.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/lisp-xyz.scm (sbcl-geco)[source]: Use it.
2020-10-31 18:01:00 +01:00
Leo Prikler 9c69fec08e
gnu: gnome-builder: Fix the build.
As reported in #43296, gnome-builder tries to be linked against the static
version of libselinux (propagated through glib/gio), failing to do so, as it
also wants to be a PIE.  To keep the PIE, link it against the dynamic library.

Fixes <https://bugs.gnu.org/43296>.

* gnu/packages/gnome.scm (gnome-builder)[arguments]: Add 'fix-ninja' phase.

Signed-off-by: Leo Famulari <leo@famulari.name>
2020-10-31 12:55:51 -04:00
Ricardo Wurmus d7e033b9a1
gnu: r-lme4: Update to 1.1-25.
* gnu/packages/statistics.scm (r-lme4): Update to 1.1-25.
2020-10-31 13:46:48 +01:00
Ricardo Wurmus 5e057bdd3f
gnu: r-quantreg: Update to 5.75.
* gnu/packages/statistics.scm (r-quantreg): Update to 5.75.
2020-10-31 13:46:48 +01:00
Ricardo Wurmus 1f5eb3bdad
gnu: r-vgam: Update to 1.1-4.
* gnu/packages/statistics.scm (r-vgam): Update to 1.1-4.
2020-10-31 13:46:48 +01:00
Ricardo Wurmus 97faa49f69
gnu: r-flexmix: Update to 2.3-17.
* gnu/packages/statistics.scm (r-flexmix): Update to 2.3-17.
2020-10-31 13:46:48 +01:00
Ricardo Wurmus 9bca3c82fb
gnu: r-statmod: Update to 1.4.35.
* gnu/packages/statistics.scm (r-statmod): Update to 1.4.35.
2020-10-31 13:46:48 +01:00
Ricardo Wurmus 6800d9bdf8
gnu: r-ztable: Update to 0.2.2.
* gnu/packages/statistics.scm (r-ztable): Update to 0.2.2.
[propagated-inputs]: Remove r-moonbook; add r-rstudioapi.
[native-inputs]: Add r-knitr.
2020-10-31 13:46:48 +01:00
Ricardo Wurmus 1b5ca298bc
gnu: r-e1071: Update to 1.7-4.
* gnu/packages/statistics.scm (r-e1071): Update to 1.7-4.
2020-10-31 13:46:48 +01:00
Ricardo Wurmus 20d86963b3
gnu: r-pkgmaker: Update to 0.32.2.
* gnu/packages/statistics.scm (r-pkgmaker): Update to 0.32.2.
[propagated-inputs]: Remove r-bibtex, r-magrittr, and r-stringi.
2020-10-31 13:46:48 +01:00
Ricardo Wurmus 398ef3dd01
gnu: r-dt: Update to 0.16.
* gnu/packages/statistics.scm (r-dt): Update to 0.16.
2020-10-31 13:46:48 +01:00
Ricardo Wurmus 4748a62a94
gnu: r-domc: Update to 1.3.7.
* gnu/packages/statistics.scm (r-domc): Update to 1.3.7.
2020-10-31 13:46:48 +01:00
Ricardo Wurmus 6b0a9017c4
gnu: r-doparallel: Update to 1.0.16.
* gnu/packages/statistics.scm (r-doparallel): Update to 1.0.16.
2020-10-31 13:46:48 +01:00
Ricardo Wurmus b93415c7c0
gnu: r-foreach: Update to 1.5.1.
* gnu/packages/statistics.scm (r-foreach): Update to 1.5.1.
2020-10-31 13:46:48 +01:00
Ricardo Wurmus 8d7adab7fd
gnu: r-iterators: Update to 1.0.13.
* gnu/packages/statistics.scm (r-iterators): Update to 1.0.13.
2020-10-31 13:46:48 +01:00
Ricardo Wurmus 84031ee8c1
gnu: r-segmented: Update to 1.3-0.
* gnu/packages/statistics.scm (r-segmented): Update to 1.3-0.
2020-10-31 13:46:48 +01:00
Ricardo Wurmus 111cdbba26
gnu: r-rmarkdown: Update to 2.5.
* gnu/packages/statistics.scm (r-rmarkdown): Update to 2.5.
[propagated-inputs]: Remove r-mime.
2020-10-31 13:46:48 +01:00
Ricardo Wurmus 698f5c0b03
gnu: r-rcpparmadillo: Update to 0.10.1.0.0.
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.10.1.0.0.
2020-10-31 13:46:47 +01:00
Ricardo Wurmus 966486cf04
gnu: r-ade4: Update to 1.7-16.
* gnu/packages/statistics.scm (r-ade4): Update to 1.7-16.
[propagated-inputs]: Add r-progress.
2020-10-31 13:46:47 +01:00
Ricardo Wurmus c06dc385bf
gnu: r-data-table: Update to 1.13.2.
* gnu/packages/statistics.scm (r-data-table): Update to 1.13.2.
2020-10-31 13:46:47 +01:00
Ricardo Wurmus dae8fb48ce
gnu: r-formula: Update to 1.2-4.
* gnu/packages/statistics.scm (r-formula): Update to 1.2-4.
2020-10-31 13:46:47 +01:00
Ricardo Wurmus 847ab02d4e
gnu: r-tibble: Update to 3.0.4.
* gnu/packages/statistics.scm (r-tibble): Update to 3.0.4.
2020-10-31 13:46:47 +01:00
Ricardo Wurmus 677f2ee69c
gnu: r-rlang: Update to 0.4.8.
* gnu/packages/statistics.scm (r-rlang): Update to 0.4.8.
2020-10-31 13:46:47 +01:00
Ricardo Wurmus 279941e087
gnu: r-r6: Update to 2.5.0.
* gnu/packages/statistics.scm (r-r6): Update to 2.5.0.
2020-10-31 13:46:47 +01:00
Ricardo Wurmus 45c6df5108
gnu: r-labeling: Update to 0.4.2.
* gnu/packages/statistics.scm (r-labeling): Update to 0.4.2.
2020-10-31 13:46:47 +01:00
Ricardo Wurmus f9e1561c46
gnu: r-digest: Update to 0.6.27.
* gnu/packages/statistics.scm (r-digest): Update to 0.6.27.
2020-10-31 13:46:47 +01:00
Ricardo Wurmus 92a837128c
gnu: r-nlme: Update to 3.1-150.
* gnu/packages/statistics.scm (r-nlme): Update to 3.1-150.
2020-10-31 13:46:47 +01:00
Ricardo Wurmus 0379e246d9
gnu: r-kernsmooth: Update to 2.23-18.
* gnu/packages/statistics.scm (r-kernsmooth): Update to 2.23-18.
2020-10-31 13:46:47 +01:00
Ricardo Wurmus e460ccba57
gnu: r-modeldata: Update to 0.1.0.
* gnu/packages/cran.scm (r-modeldata): Update to 0.1.0.
2020-10-31 13:46:47 +01:00
Ricardo Wurmus 548ada697a
gnu: r-parsnip: Update to 0.1.4.
* gnu/packages/cran.scm (r-parsnip): Update to 0.1.4.
2020-10-31 13:46:47 +01:00
Ricardo Wurmus aea98cea78
gnu: r-tidypredict: Update to 0.4.8.
* gnu/packages/cran.scm (r-tidypredict): Update to 0.4.8.
2020-10-31 13:46:46 +01:00
Ricardo Wurmus ceec32b92d
gnu: r-warp: Update to 0.2.0.
* gnu/packages/cran.scm (r-warp): Update to 0.2.0.
2020-10-31 13:46:46 +01:00
Ricardo Wurmus bbe6d41e3c
gnu: r-workflows: Update to 0.2.1.
* gnu/packages/cran.scm (r-workflows): Update to 0.2.1.
2020-10-31 13:46:46 +01:00
Ricardo Wurmus adf17f25f4
gnu: r-igraph: Update to 1.2.6.
* gnu/packages/cran.scm (r-igraph): Update to 1.2.6.
2020-10-31 13:46:46 +01:00
Ricardo Wurmus b0144e2d8a
gnu: r-rcppziggurat: Update to 0.1.6.
* gnu/packages/cran.scm (r-rcppziggurat): Update to 0.1.6.
2020-10-31 13:46:46 +01:00
Ricardo Wurmus 41a73262e2
gnu: r-cpp11: Update to 0.2.3.
* gnu/packages/cran.scm (r-cpp11): Update to 0.2.3.
2020-10-31 13:46:46 +01:00
Ricardo Wurmus a9b7c063ef
gnu: r-rismed: Update to 2.2.
* gnu/packages/cran.scm (r-rismed): Update to 2.2.
2020-10-31 13:46:46 +01:00
Ricardo Wurmus 6058241bf4
gnu: r-brms: Update to 2.14.0.
* gnu/packages/cran.scm (r-brms): Update to 2.14.0.
2020-10-31 13:46:46 +01:00
Ricardo Wurmus d13123aac1
gnu: r-iheatmapr: Update to 0.5.1.
* gnu/packages/cran.scm (r-iheatmapr): Update to 0.5.1.
2020-10-31 13:46:45 +01:00
Ricardo Wurmus cc30f144d7
gnu: r-acet: Update to 1.8.1.
* gnu/packages/cran.scm (r-acet): Update to 1.8.1.
2020-10-31 13:46:45 +01:00
Ricardo Wurmus 88c75556de
gnu: r-rgdal: Update to 1.5-18.
* gnu/packages/cran.scm (r-rgdal): Update to 1.5-18.
2020-10-31 13:46:45 +01:00
Ricardo Wurmus fa1a4b66c1
gnu: r-parameters: Update to 0.9.0.
* gnu/packages/cran.scm (r-parameters): Update to 0.9.0.
2020-10-31 13:46:45 +01:00
Ricardo Wurmus 79291c5cd3
gnu: r-graphlayouts: Update to 0.7.1.
* gnu/packages/cran.scm (r-graphlayouts): Update to 0.7.1.
2020-10-31 13:46:45 +01:00
Ricardo Wurmus f213968976
gnu: r-leiden: Update to 0.3.4.
* gnu/packages/cran.scm (r-leiden): Update to 0.3.4.
[native-inputs]: Add r-knitr.
2020-10-31 13:46:45 +01:00
Ricardo Wurmus 20bfb71102
gnu: r-kableextra: Update to 1.3.1.
* gnu/packages/cran.scm (r-kableextra): Update to 1.3.1.
2020-10-31 13:46:45 +01:00
Ricardo Wurmus 1479a53a75
gnu: r-dalex: Update to 2.0.1.
* gnu/packages/cran.scm (r-dalex): Update to 2.0.1.
2020-10-31 13:46:45 +01:00
Ricardo Wurmus 31841386ea
gnu: r-batchtools: Update to 0.9.14.
* gnu/packages/cran.scm (r-batchtools): Update to 0.9.14.
2020-10-31 13:46:44 +01:00
Ricardo Wurmus cd98078c75
gnu: r-sctransform: Update to 0.3.1.
* gnu/packages/cran.scm (r-sctransform): Update to 0.3.1.
[propagated-inputs]: Remove r-rcppeigen; add r-matrixstats and r-rcpparmadillo.
2020-10-31 13:46:44 +01:00
Ricardo Wurmus 4788286556
gnu: r-bookdown: Update to 0.21.
* gnu/packages/cran.scm (r-bookdown): Update to 0.21.
[propagated-inputs]: Add r-yaml.
2020-10-31 13:46:44 +01:00
Ricardo Wurmus 61d420311d
gnu: r-ldheatmap: Update to 1.0-4.
* gnu/packages/cran.scm (r-ldheatmap): Update to 1.0-4.
2020-10-31 13:46:44 +01:00
Ricardo Wurmus 5619d9ddf5
gnu: r-haplo-stats: Update to 1.8.6.
* gnu/packages/cran.scm (r-haplo-stats): Update to 1.8.6.
2020-10-31 13:46:44 +01:00
Ricardo Wurmus 7028e6331d
gnu: r-seqinr: Update to 4.2-4.
* gnu/packages/cran.scm (r-seqinr): Update to 4.2-4.
2020-10-31 13:46:44 +01:00
Ricardo Wurmus cfbbcbd84a
gnu: r-valr: Update to 0.6.2.
* gnu/packages/cran.scm (r-valr): Update to 0.6.2.
2020-10-31 13:46:44 +01:00
Ricardo Wurmus 1beed5b82f
gnu: r-pbdzmq: Update to 0.3-3.1.
* gnu/packages/cran.scm (r-pbdzmq): Update to 0.3-3.1.
2020-10-31 13:46:44 +01:00
Ricardo Wurmus caec927852
gnu: r-globals: Update to 0.13.1.
* gnu/packages/cran.scm (r-globals): Update to 0.13.1.
2020-10-31 13:46:44 +01:00
Ricardo Wurmus 50110d8bb1
gnu: r-fields: Update to 11.6.
* gnu/packages/cran.scm (r-fields): Update to 11.6.
2020-10-31 13:46:43 +01:00
Ricardo Wurmus 7ec575fa39
gnu: r-rnifti: Update to 1.2.3.
* gnu/packages/cran.scm (r-rnifti): Update to 1.2.3.
2020-10-31 13:46:43 +01:00
Ricardo Wurmus f1e8076b99
gnu: r-nlp: Update to 0.2-1.
* gnu/packages/cran.scm (r-nlp): Update to 0.2-1.
2020-10-31 13:46:43 +01:00
Ricardo Wurmus a40c6998e1
gnu: r-feature: Update to 1.2.14.
* gnu/packages/cran.scm (r-feature): Update to 1.2.14.
[propagated-inputs]: Remove r-misc3d and r-rgl.
[native-inputs]: Add r-knitr.
2020-10-31 13:46:43 +01:00
Ricardo Wurmus 8c2febd8d0
gnu: r-lmertest: Update to 3.1-3.
* gnu/packages/cran.scm (r-lmertest): Update to 3.1-3.
2020-10-31 13:46:43 +01:00
Ricardo Wurmus 4adef5cb84
gnu: r-sjplot: Update to 2.8.6.
* gnu/packages/cran.scm (r-sjplot): Update to 2.8.6.
2020-10-31 13:46:43 +01:00
Ricardo Wurmus 430760f345
gnu: r-effectsize: Update to 0.4.0.
* gnu/packages/cran.scm (r-effectsize): Update to 0.4.0.
2020-10-31 13:46:43 +01:00
Ricardo Wurmus d423381e77
gnu: r-performance: Update to 0.5.1.
* gnu/packages/cran.scm (r-performance): Update to 0.5.1.
2020-10-31 13:46:43 +01:00
Ricardo Wurmus 61dfc06583
gnu: r-bayestestr: Update to 0.7.5.
* gnu/packages/cran.scm (r-bayestestr): Update to 0.7.5.
2020-10-31 13:46:42 +01:00
Ricardo Wurmus a3bc425c02
gnu: r-emmeans: Update to 1.5.2-1.
* gnu/packages/cran.scm (r-emmeans): Update to 1.5.2-1.
2020-10-31 13:46:42 +01:00
Ricardo Wurmus da1c6af00d
gnu: r-magick: Update to 2.5.0.
* gnu/packages/cran.scm (r-magick): Update to 2.5.0.
2020-10-31 13:46:42 +01:00
Ricardo Wurmus 7fba2d41f5
gnu: r-furrr: Update to 0.2.1.
* gnu/packages/cran.scm (r-furrr): Update to 0.2.1.
[propagated-inputs]: Add r-ellipsis, r-lifecycle, and r-vctrs.
2020-10-31 13:46:42 +01:00
Ricardo Wurmus cb58ec5143
gnu: r-deriv: Update to 4.1.1.
* gnu/packages/cran.scm (r-deriv): Update to 4.1.1.
2020-10-31 13:46:42 +01:00
Ricardo Wurmus e5eb63fa60
gnu: r-argparse: Update to 2.0.3.
* gnu/packages/cran.scm (r-argparse): Update to 2.0.3.
[native-inputs]: Add r-knitr.
2020-10-31 13:46:42 +01:00
Ricardo Wurmus 10849c6b22
gnu: r-insight: Update to 0.10.0.
* gnu/packages/cran.scm (r-insight): Update to 0.10.0.
2020-10-31 13:46:42 +01:00
Ricardo Wurmus d97f947094
gnu: r-abn: Update to 2.3-0.
* gnu/packages/cran.scm (r-abn): Update to 2.3-0.
[propagated-inputs]: Remove r-boot, r-brglm, r-entropy, r-mass, and r-moments.
2020-10-31 13:46:42 +01:00
Ricardo Wurmus dd01a9afe7
gnu: r-brglm: Update to 0.7.1.
* gnu/packages/cran.scm (r-brglm): Update to 0.7.1.
2020-10-31 13:46:41 +01:00
Ricardo Wurmus 6b53fac81b
gnu: r-rdpack: Update to 2.0.
* gnu/packages/cran.scm (r-rdpack): Update to 2.0.
[propagated-inputs]: Remove r-bibtex; add r-rbibutils.
2020-10-31 13:46:41 +01:00
Ricardo Wurmus 8f19d93b8b
gnu: r-reticulate: Update to 1.18.
* gnu/packages/cran.scm (r-reticulate): Update to 1.18.
2020-10-31 13:46:41 +01:00
Ricardo Wurmus 815c38ca2f
gnu: r-dosnow: Update to 1.0.19.
* gnu/packages/cran.scm (r-dosnow): Update to 1.0.19.
2020-10-31 13:46:41 +01:00
Ricardo Wurmus ba79efee02
gnu: r-openxlsx: Update to 4.2.3.
* gnu/packages/cran.scm (r-openxlsx): Update to 4.2.3.
2020-10-31 13:46:41 +01:00