fb3b4ffbb7
gnu: Fix indentation in OpenJDK packages.
...
* gnu/packages/java.scm (openjdk9, openjdk10, openjdk11, openjdk12)
(openjdk13, openjdk14): Untabify and indent with Emacs.
2021-02-12 11:40:10 +01:00
44425e1f2a
gnu: openjdk@11: Add phase to hardcode libraries.
...
This fixes a NullPointerException related to using fontconfig,
see also <https://bugs.gnu.org/41177 >.
* gnu/packages/java.scm (openjdk11)[arguments]: Add patch-jni-libs phase.
Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-02-12 11:40:10 +01:00
84805ef205
gnu: openjdk@9 : Add phase to hardcode libraries.
...
This fixes a NullPointerException related to using fontconfig,
see also <https://bugs.gnu.org/41177 >.
* gnu/packages/java.scm (openjdk9)[arguments]: Add patch-jni-libs phase.
Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-02-12 11:40:07 +01:00
b72444a4cc
doc: Fix for 'guix pull'.
...
Fixes a regression introduced in db6b9d2f4b
2021-02-12 17:31:47 +08:00
15903eaab6
gnu: bpytop: Don't propagated python-psutil.
...
* gnu/packages/admin.scm (bpytop): Move python-psutil to propagated-inputs.
2021-02-12 17:09:00 +08:00
c84698ef95
gnu: Add xkeysnail.
...
* gnu/packages/xdisorg.scm (xkeysnail): New variable.
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2021-02-12 17:08:02 +08:00
18e79929f1
gnu: Add bpytop.
...
* gnu/packages/admin.scm (bpytop): New variable.
2021-02-12 16:58:02 +08:00
4e96ce4294
gnu: dwl: Fix command name in description.
...
* gnu/packages/wm.scm (dwl)[description]: Fix typo.
2021-02-12 15:36:40 +08:00
c5f5b356da
gnu: Add dwl.
...
* gnu/packages/wm.scm (dwl): New variable.
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2021-02-12 15:34:38 +08:00
8cd181e4d8
gnu: pianobar: Update to 2020.11.28.
...
* gnu/packages/music.scm (pianobar): Update to 2020.11.28.
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2021-02-12 15:24:28 +08:00
db6b9d2f4b
services: Add transmission-daemon service.
...
* gnu/services/file-sharing.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* po/packages/POTFILES.in: Add it.
* tests/services/file-sharing.scm: New file.
* Makefile.am (SCM_TESTS): Add it.
* doc/guix.texi (File-Sharing Services): New section.
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2021-02-12 15:11:36 +08:00
8458d8db70
gnu: zfs: Update to 2.0.3.
...
* gnu/packages/file-systems.scm (zfs): Update to 2.0.3.
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2021-02-12 13:56:38 +08:00
f813750a4a
gnu: diffoscope: Update to 166.
...
* gnu/packages/diffoscope.scm (diffoscope): Update to 166.
[source]: Add patch to use magic.open compatibility interface.
* gnu/packages/patches/diffoscope-revert-to-magic-open.patch: New file.
* gnu/local.mk [dist_patch_DATA]: New patch.
2021-02-11 18:57:38 -08:00
6bf136c890
gnu: opam: Update to 2.0.8.
...
* gnu/packages/ocaml.scm (opam): Update to 2.0.8.
2021-02-11 23:53:40 +01:00
af0e5164b8
gnu: emacs-marginalia: Update to 0.3.
...
* gnu/packages/emacs-xyz.scm (emacs-marginalia): Update to 0.3.
2021-02-11 23:50:25 +01:00
b101d9f651
gnu: emacs-consult: Update to 0.5.
...
* gnu/packages/emacs-xyz.scm (emacs-consult): Update to 0.5.
2021-02-11 23:48:31 +01:00
160e4a95e7
gnu: bowtie1: Update to 1.3.0.
...
* gnu/packages/bioinformatics.scm (bowtie1): Update to 1.3.0.
[arguments]: Set CC in make flags.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2021-02-11 22:29:37 +01:00
175bea0ca4
doc: Try to improve the branching workflow.
...
* doc/contributing.texi (Submitting Patches): Introduce the use of "-frozen"
branch names.
2021-02-11 16:13:39 -05:00
0e3e26ca60
gnu: r-gage: Update to 2.40.1.
...
* gnu/packages/bioinformatics.scm (r-gage): Update to 2.40.1.
2021-02-11 21:33:38 +01:00
5103da059a
gnu: r-msnbase: Update to 2.16.1.
...
* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.16.1.
2021-02-11 21:33:38 +01:00
2596200514
gnu: r-methylkit: Update to 1.16.1.
...
* gnu/packages/bioinformatics.scm (r-methylkit): Update to 1.16.1.
2021-02-11 21:33:38 +01:00
3f7e96acc7
gnu: r-delayedarray: Update to 0.16.1.
...
* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.16.1.
2021-02-11 21:33:38 +01:00
9b66b8017d
gnu: r-biomart: Update to 2.46.3.
...
* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.46.3.
2021-02-11 21:33:38 +01:00
8e25b1acf9
gnu: r-edger: Update to 3.32.1.
...
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.32.1.
2021-02-11 21:33:38 +01:00
809f725977
gnu: r-iranges: Update to 2.24.1.
...
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.24.1.
2021-02-11 21:33:37 +01:00
88fd569ddf
gnu: r-s4vectors: Update to 0.28.1.
...
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.28.1.
2021-02-11 21:33:37 +01:00
babb2dce34
gnu: r-systempiper: Update to 1.24.3.
...
* gnu/packages/bioinformatics.scm (r-systempiper): Update to 1.24.3.
2021-02-11 21:33:37 +01:00
d3ac91dd9d
gnu: r-gseabase: Update to 1.52.1.
...
* gnu/packages/bioinformatics.scm (r-gseabase): Update to 1.52.1.
2021-02-11 21:33:37 +01:00
074d142ab6
gnu: r-genefilter: Update to 1.72.1.
...
* gnu/packages/bioinformatics.scm (r-genefilter): Update to 1.72.1.
2021-02-11 21:33:37 +01:00
311bb4bc3d
gnu: r-delayedmatrixstats: Update to 1.12.3.
...
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.12.3.
2021-02-11 21:33:37 +01:00
8acfd9f3d4
gnu: r-sparsematrixstats: Update to 1.2.1.
...
* gnu/packages/bioconductor.scm (r-sparsematrixstats): Update to 1.2.1.
2021-02-11 21:33:37 +01:00
de4fc49270
gnu: r-scran: Update to 1.18.5.
...
* gnu/packages/bioconductor.scm (r-scran): Update to 1.18.5.
2021-02-11 21:33:37 +01:00
cf3e703820
gnu: r-scuttle: Update to 1.0.4.
...
* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.0.4.
2021-02-11 21:33:37 +01:00
79d51ffeca
gnu: r-beachmat: Update to 2.6.4.
...
* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.6.4.
2021-02-11 21:33:37 +01:00
a1357422c3
gnu: r-rhdf5lib: Update to 1.12.1.
...
* gnu/packages/bioconductor.scm (r-rhdf5lib): Update to 1.12.1.
2021-02-11 21:33:37 +01:00
f7947f8991
gnu: r-hdf5array: Update to 1.18.1.
...
* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.18.1.
2021-02-11 21:33:37 +01:00
18ebacaa1c
gnu: r-preprocesscore: Update to 1.52.1.
...
* gnu/packages/bioconductor.scm (r-preprocesscore): Update to 1.52.1.
2021-02-11 21:33:37 +01:00
da109ae738
gnu: r-chemminer: Update to 3.42.1.
...
* gnu/packages/bioconductor.scm (r-chemminer): Update to 3.42.1.
2021-02-11 21:33:37 +01:00
6f37c3ea40
gnu: r-gdsfmt: Update to 1.26.1.
...
* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.26.1.
2021-02-11 21:33:36 +01:00
9470f901d9
gnu: r-cytolib: Update to 2.2.1.
...
* gnu/packages/bioconductor.scm (r-cytolib): Update to 2.2.1.
2021-02-11 21:33:36 +01:00
691178d67b
gnu: r-multidataset: Update to 1.18.1.
...
* gnu/packages/bioconductor.scm (r-multidataset): Update to 1.18.1.
2021-02-11 21:33:36 +01:00
6d0709231f
gnu: r-clusterprofiler: Update to 3.18.1.
...
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 3.18.1.
2021-02-11 21:33:36 +01:00
ebf9ad7984
gnu: r-enrichplot: Update to 1.10.2.
...
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.10.2.
2021-02-11 21:33:36 +01:00
669ea5ab09
gnu: r-matrixgenerics: Update to 1.2.1.
...
* gnu/packages/bioconductor.scm (r-matrixgenerics): Update to 1.2.1.
2021-02-11 21:33:36 +01:00
61609fb88e
gnu: r-diffbind: Update to 3.0.13.
...
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.0.13.
2021-02-11 21:33:36 +01:00
a18492118c
gnu: OpenLDAP: Update to 2.4.57 [security fixes].
...
Fixes CVE-2020-{36221,36222,36223,36224,36225,36226,36226,36228,36229,36230}.
* gnu/packages/openldap.scm (openldap-2.4.57): New variable.
(openldap)[replacement]: New field.
2021-02-11 15:02:53 -05:00
7f891056d4
gnu: Add wob.
...
* gnu/packages/xdisorg.scm (wob): New variable.
2021-02-11 20:54:04 +01:00
cf95ef7f44
gnu: Add gammastep.
...
* gnu/packages/xdisorg.scm (gammastep): New variable.
2021-02-11 20:50:39 +01:00
c5dc87fee8
gnu: Add font-cozette.
...
* gnu/packages/fonts.scm (font-cozette): New variable.
2021-02-11 17:51:50 +01:00
7cabeb80d4
gnu: Add python-crayons.
...
* gnu/packages/python-xyz.scm (python-crayons): New variable.
2021-02-11 17:50:16 +01:00
Leo Prikler
Björn Höfling
宋文武
Zheng Junjie
Stefan Reichör
Simon South
raid5atemyhomework
Vagrant Cascadian
Julien Lepiller
Nicolas Goaziou
Mădălin Ionel Patrașcu
Leo Famulari
Ricardo Wurmus