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Author SHA1 Message Date
Malte Frank Gerdes 504dd8b696
gnu: Add python-pyinstrument.
* gnu/packages/python-check.scm (python-pyinstrument): New variable.

Co-authored-by: Guillaume Le Vaillant <glv@posteo.net>
2022-04-07 18:35:38 +02:00
Malte Frank Gerdes 8d2493dda1
gnu: Add cura-binary-data.
* gnu/packages/engineering.scm (cura-binary-data): New variable.

Co-authored-by: Guillaume Le Vaillant <glv@posteo.net>
2022-04-07 15:54:02 +02:00
Malte Frank Gerdes 742a7d897f
gnu: Add cura-engine.
* gnu/packages/engineering.scm (cura-engine): New variable.

Co-authored-by: Guillaume Le Vaillant <glv@posteo.net>
2022-04-07 15:41:18 +02:00
Malte Frank Gerdes 390d68c956
gnu: Add libarcus.
* gnu/packages/engineering.scm (libarcus): New variable.

Co-authored-by: Guillaume Le Vaillant <glv@posteo.net>
2022-04-07 15:30:49 +02:00
André A. Gomes 7409f246e2
gnu: cl-slynk: Update to 1.0.43-6.4513c38.
* gnu/packages/lisp-xyz.scm (sbcl-slynk): Update to 1.0.43-6.4513c38.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-04-07 13:38:00 +02:00
André A. Gomes 68d7471cbd
gnu: emacs-sly: Update to 1.0.43-6.4513c38.
* gnu/packages/emacs-xyz.scm (emacs-sly): Update to 1.0.43-6.4513c38.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-04-07 13:34:45 +02:00
Peter Polidoro 90b5353132
gnu: kicad: Update to 6.0.4.
* gnu/packages/engineering.scm (kicad, kicad-doc, kicad-symbols,
  kicad-footprints, kicad-packages3d, kicad-templates): Update to 6.0.4.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-04-07 11:11:14 +02:00
jgart b94b334cb7
gnu: cl-sxql: Update to 0.1.0-3.cc3478c.
* gnu/packages/lisp-xyz.scm (sbcl-sxql): Update to 0.1.0-3.cc3478c and use
  revision variable in let block.
  [inputs]: Add missing sbcl-trivia input.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-04-07 10:23:15 +02:00
Ludovic Courtès 28b3763e33
secret-service: Allow cooperative scheduling when Fibers is used.
This lets the 'childhurd' service start in the background, letting
shepherd perform other tasks in the meantime, including serving
clients (such as the 'herd' command).

* gnu/build/secret-service.scm (with-modules): New macro.
(wait-for-readable-fd): Add cooperative implementation when Fibers is in
use.
(secret-service-send-secrets): Define 'sleep' so that it cooperates when
Fibers is in use.
2022-04-07 00:08:56 +02:00
Ludovic Courtès 83121aa85a
secret-service: Abstract 'wait-for-readable-fd'.
* gnu/build/secret-service.scm (wait-for-readable-fd): New procedure.
(secret-service-send-secrets): Use it instead of 'select'.
2022-04-07 00:08:56 +02:00
Ludovic Courtès 808b9e8504
services: openssh: Start as an inetd service.
* gnu/services/ssh.scm (openssh-shepherd-service): Use
'make-inetd-constructor' when it is defined.
(<openssh-configuration>)[max-connections]: New field.
* gnu/tests/ssh.scm (run-ssh-test)["sshd PID"]: Adjust to cope with
PID-FILE being #f.
* gnu/tests/ssh.scm (%test-openssh): Pass #f as the 'pid-file'
argument.
* doc/guix.texi (Networking Services): Document 'max-connections'.
2022-04-07 00:08:56 +02:00
Ludovic Courtès 22ab901466
home: shepherd: Default to version 0.9.
* gnu/home/services/shepherd.scm (<home-shepherd-configuration>)[shepherd]:
Default to SHEPHERD-0.9.
(home-shepherd-configuration-file): Use 'start-in-the-background' when
it is defined.
2022-04-07 00:08:56 +02:00
Ludovic Courtès 400c9ed3d7
services: shepherd: Default to version 0.9.
* gnu/services/shepherd.scm (scm->go): Define 'shepherd&co' and pass it
to 'with-extensions'.
(shepherd-configuration-file): Call 'start-in-the-background' when it is
defined.
(<shepherd-configuration>)[shepherd]: Default to SHEPHERD-0.9.
* gnu/system.scm (hurd-default-essential-services): Use SHEPHERD-0.8.
2022-04-07 00:08:56 +02:00
Ludovic Courtès 938448bf40
shepherd: Adjust 'fork+exec-command/container' for the Shepherd 0.9.
* gnu/build/shepherd.scm (exec-command*): New procedure, with code
formerly...
(make-forkexec-constructor/container): ... here.  Use it.
(fork+exec-command/container): Use 'fork+exec-command' only when
CONTAINER-SUPPORT? is false or PID is the current process.
2022-04-07 00:08:55 +02:00
Ludovic Courtès d4172babe0
gnu: shepherd: Add 0.9.0.
* gnu/packages/admin.scm (shepherd): Rename to...
(shepherd-0.8): ... this.  New variable.
(shepherd): Define as an alias for SHEPHERD-0.8.
(shepherd-0.9): New variable.
(guile2.2-shepherd): Inherit from SHEPHERD-0.9 and adjust inputs
accordingly.
2022-04-07 00:08:55 +02:00
Efraim Flashner aacd44278b
gnu: lagrange: Update to 1.12.1.
* gnu/packages/web-browsers.scm (lagrange): Update to 1.12.1.
2022-04-06 23:33:28 +03:00
Efraim Flashner 00ce149606
gnu: keepassxc: Update to 2.7.1.
* gnu/packages/password-utils.scm (keepassxc): Update to 2.7.1.
2022-04-06 23:31:22 +03:00
Efraim Flashner 3ac90f92a0
gnu: vim: Update to 8.2.4701.
* gnu/packages/vim.scm (vim): Update to 8.2.4701.
[arguments]: Adjust custom 'skip-or-fix-failing-tests phase to skip
another test.
2022-04-06 22:57:48 +03:00
Mathieu Othacehe c2125e59d0
installer: user: Remove useless filtering.
* gnu/installer/user.scm (users->configuration): Remove root account filtering
that is now performed in the "run-user-add-page" procedure.
2022-04-06 21:19:08 +02:00
Mathieu Othacehe 2bfb27af56
installer: user: Forbid root user creation.
Forbid root user creation as it could lead to a system without any
non-priviledged user accouts.

Fixes: <https://issues.guix.gnu.org/54666>.

* gnu/installer/newt/user.scm (run-user-add-page): Forbid it.
2022-04-06 21:19:07 +02:00
Ricardo Wurmus 3b262b51fa
gnu: python-pybtex: Update to 0.24.0.
* gnu/packages/python-xyz.scm (python-pybtex): Update to 0.24.0.
[native-inputs]: Remove python-nose; add python-pytest.
[inputs]: Move python-latexcodec, python-pyyaml, and python-six from here...
[propagated-inputs]: ...to here.
[arguments]: Use pytest.
2022-04-06 12:37:33 +02:00
Ricardo Wurmus e1df15794b
gnu: python-latexcodec: Update to 2.0.1.
* gnu/packages/python-xyz.scm (python-latexcodec): Update to 2.0.1.
[inputs]: Move python-six from here...
[propagated-inputs]: ...to here.
2022-04-06 12:37:10 +02:00
Hong Li e3e3381fdb
gnu: Add r-rnaseqdtu.
* gnu/packages/bioinformatics.scm (r-rnaseqdtu): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-04-06 11:43:46 +02:00
Hong Li 730ac9ab85
gnu: Add r-stager.
* gnu/packages/bioconductor.scm (r-stager): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-04-06 11:43:46 +02:00
Hong Li a8182f386e
gnu: Add r-rafalib.
* gnu/packages/cran.scm (r-rafalib): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-04-06 11:43:46 +02:00
Mark H Weaver 3b3cc9dfed
gnu: icecat: Update to 91.8.0-guix0-preview1 [security fixes].
Includes fixes for CVE-2022-1097, CVE-2022-1196, CVE-2022-24713,
CVE-2022-28281, CVE-2022-28282, CVE-2022-28285, CVE-2022-28286, and
CVE-2022-28289.

* gnu/packages/gnuzilla.scm (%icecat-version, %icecat-build-id): Update.
(icecat-source): Update gnuzilla commit, base version, and hashes.
2022-04-05 18:12:15 -04:00
Liliana Marie Prikler 4bfb75531c
gnu: poco: Make description a full sentence.
* gnu/packages/cpp.scm (poco)[description]: Expand into a full sentence.
2022-04-05 21:17:59 +02:00
Ricardo Wurmus d643ef38ed
gnu: u-boot-rockpro64-rk3399: Add support for booting from SCSI/SATA.
* gnu/packages/bootloaders.scm (u-boot-rockpro64-rk3399)[arguments]: Add
  'patch-config phase to support SCSI/SATA disks.

Signed-off-by: Vagrant Cascadian <vagrant@debian.org>
2022-04-05 12:05:28 -07:00
Vagrant Cascadian 4a0d045990
gnu: u-boot: Update to 2022.04.
* gnu/packages/bootloaders.scm (u-boot): Update to 2022.01.
  [native-inputs]: Add gnutls, tinfo, libuuid.
  (u-boot-qemu-riscv64-smode): Drop custom
  patches.
* gnu/packages/patches/u-boot-allow-disabling-openssl.patch: Refresh patch.
* gnu/packages/patches/u-boot-riscv64-fix-extlinux.patch: Remove patch,
  applied upstream.
* gnu/local.mk (dist_patch_DATA): Update with removed patches.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2022-04-05 12:05:22 -07:00
Vagrant Cascadian 20302e0b16
gnu: Add ncurses-with-tinfo.
* gnu/packages/ncurses.scm (ncurses/tinfo): New variable.
2022-04-05 12:05:19 -07:00
Andrew Tropin e777c3e34c
gnu: l2md: Update to 9db252bc.
[[PGP Signed Part:No public key for 2208D20958C1DEB0 created at 2022-03-28T11:03:48+0200 using RSA]]

* gnu/packages/mail.scm (l2md): Update to 9db252bc.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05 20:41:41 +02:00
Attila Lendvai 9ef6d80ef4
services: messaging: Fix two copy-paste mistakes; avoid warnings.
* gnu/services/messaging.scm (file-name-list, file-object-list): Fix
name in 'define-maybe' instances.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05 20:41:41 +02:00
ykonai 84e0cbbc9c
gnu: plocate: Build with "--sharedstatedir=/var".
Current plocate package sets the --sharedstatedir to a store directory, which
causes updatedb and plocate to fail by default since the store is immutable.
This will set the default database path to /var/cache/plocate.db instead.

* gnu/packages/search.scm (plocate): Change build options.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05 20:41:41 +02:00
Leo Nikkilä d15a601a85
gnu: phodav: Use libsoup 2 instead of libsoup 3.
Looks like phodav requires libsoup 2. Example of failing build logs,
wanting libsoup 2.4: <https://ci.guix.gnu.org/build/584454/log/raw>

After swapping the dependency, tests were failing due to HOME not being
writable. I added a new build phase to account for this. I also removed
the start-virtual-dir-server phase which no longer seems required, the
tests pass without it.

* gnu/packages/gnome.scm (phodav): Fix build, tests.
[inputs]: Replace libsoup 3 with libsoup 2.
[arguments]<#:phases>[set-temporary-home]: New phase.
[arguments]<#:phases>[start-virtual-dir-server]: Remove phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05 20:41:40 +02:00
jgart 86ee397e26
gnu: pantheon-calculator: Update to 1.7.2.
* gnu/packages/pantheon.scm (pantheon-calculator): Update to 1.7.2.
[arguments]: Remove trailing boolean.
[inputs]: Use guix style and add libhandy input.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05 20:41:40 +02:00
Felix Gruber c9cca908fa
gnu: python-w3lib: Fix build.
* gnu/packages/python-web.scm (python-w3lib): Fix build.
  [source]: Add python-w3lib-fix-test-failure.patch.
  [arguments]: Use pytest in the 'check phase.
  [native-inputs]: Add python-pytest.
* gnu/packages/patches/python-w3lib-fix-test-failure.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05 20:41:40 +02:00
Zhu Zihao 27a6e8501f
gnu: python-gst: Fix the concatenation of install path.
Fixes a regression introduced in a5c2e7961c.

* gnu/packages/gstreamer.scm (python-gst):
[arguments]:
<configure-flags>: Add missing leading slash.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05 20:41:40 +02:00
jgart 9d25dab4db
gnu: python-dotenv: Update to 0.20.0.
* gnu/packages/python-xyz.scm (python-dotenv): Update to 0.20.0.
[home-page]: Update home page.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05 20:41:40 +02:00
antlers 0748d3febd
gnu: linux: Allow kconfig options to be strings
* gnu/packages/linux.scm (config->string): add a clause handling strings

Allows for the declarative configuration of kconfig options which accept
strings, such as CONFIG_MODULE_SIG_KEY.

I've enclosed the given string in quotes, but don't do any kind of
escaping. See the kernel mailing list for the current state of escaped
strings upstream:

https://patchwork.kernel.org/project/linux-kbuild/patch/1431003982-992-1-git-send-email-sr@denx.de/

Apologies to those with double-quotes or backslashes in their
CONFIG_SYSTEM_*_KEYS.

Signed-off-by: antlers <autumnalantlers@gmail.com>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05 20:41:40 +02:00
Michael Rohleder 3e599b99da
gnu: celluloid: Update to 0.23.
* gnu/packages/video.scm (celluloid): Update to 0.23.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05 20:41:39 +02:00
Aleksandr Vityazev 1e0cd871b8
doc: Update the sample yggdrasil-private.conf.
* doc/guix.texi (Networking Services): Update the sample yggdrasil-private.conf.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05 20:41:39 +02:00
Imran Iqbal 1fed7ab09e
gnu: curlie: Update to 1.6.9
* gnu/packages/curl.scm (curlie): Update to 1.6.9

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05 20:41:39 +02:00
Daniel Meißner 2a70e7922c
gnu: xmonad-next: Change #:phases to gexp.
* gnu/packages/wm.scm (xmonad-next)[arguments]: Use #$output, #$name
and #$synopsis instead of %output, name and synopsis.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05 20:41:39 +02:00
Ricardo Wurmus 66177c2b87
Merge branch 'wip-pyyaml' 2022-04-05 19:03:57 +02:00
Ricardo Wurmus df2dc0c416
gnu: pigx-scrnaseq: Set NUMBA_CACHE_DIR.
This is needed since the update of python-loompy.

* gnu/packages/bioinformatics.scm (pigx-scrnaseq)[arguments]: Rename
'set-PYTHONPATH to 'set-additional-environment-variables and set
NUMBA_CACHE_DIR.
2022-04-05 18:40:48 +02:00
Ricardo Wurmus e721122069
gnu: pigx-scrnaseq: Use new inputs style.
* gnu/packages/bioinformatics.scm (pigx-scrnaseq)[inputs]: Use plain list.
2022-04-05 18:40:48 +02:00
Ricardo Wurmus 5d1c9fcdcf
gnu: pigx-scrnaseq: Update to 1.1.8.
* gnu/packages/bioinformatics.scm (pigx-scrnaseq): Update to 1.1.8.
[patches]: Remove.
[native-inputs]: Remove.
* gnu/packages/patches/pigx-scrnaseq-no-citeproc.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2022-04-05 18:40:48 +02:00
Florian Pelz 029cb8c95f
news: Add 'de' translation.
* etc/news.scm: Add German translation of 'guix shell --export-manifest' entry.
2022-04-05 16:28:48 +02:00
Ricardo Wurmus 860010ac2a
gnu: r-with-tests: Update to 4.1.3.
* gnu/packages/statistics.scm (r-with-tests): Update to 4.1.3.
2022-04-05 15:14:41 +02:00
Greg Hogan 78e8c20179
gnu: git: Update to 2.35.1.
* gnu/packages/version-control.scm (git): Update to 2.35.1.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2022-04-05 08:48:47 -04:00