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Author SHA1 Message Date
Ludovic Courtès 5f7f4e16d6
gnu: guile-json: Update to 4.5.1. 
Fixes <https://bugs.gnu.org/45615>.
Reported by Hartmut Goebel <h.goebel@crazy-compilers.com>.

* gnu/packages/guile.scm (guile-json-4): Update to 4.5.1.
 2021-01-21 11:22:08 +01:00
Ludovic Courtès 1278b157c0
gnu: guix: Update to d4a562b. 
* gnu/packages/package-management.scm (guix): Update to d4a562b.
 2021-01-21 11:22:07 +01:00
Pierre Langlois a1819473c3
gnu: dnsmasq: Update to 2.83 [security fixes]. 
Includes fixes for CVE-2020-25681, CVE-2020-25682, CVE-2020-25683,
CVE-2020-25684, CVE-2020-25685, CVE-2020-25686, CVE-2020-25687.

* gnu/packages/dns.scm (dnsmasq): Update to 2.83.
 2021-01-21 09:12:36 +00:00
Tobias Geerinckx-Rice 3bdd380ff0
gnu: bind: Update to 9.16.11. 
* gnu/packages/dns.scm (bind): Update to 9.16.11.
 2021-01-21 09:29:15 +01:00
Oleg Pykhalov c92590ca1d
gnu: Add emacs-jsonnet-mode. 
* gnu/packages/emacs-xyz.scm (emacs-jsonnet-mode): New variable.
 2021-01-21 06:12:09 +03:00
Leo Famulari 708d3ec0de
gnu: Mutt: Fix CVE-2021-3181. 
* gnu/packages/patches/mutt-CVE-2021-3181.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/mail.scm (mutt)[source]: Use it.
 2021-01-20 19:36:24 -05:00
zimoun 41134f915f
gnu: libnode: Fix regression in unused phases. 
Fixes regression introduced with commit
1d77141f6d.

Reported by Pierre-Antoine Bouttier
<pierre-antoine.bouttier@univ-grenoble-alpes.fr>.

* gnu/packages/node.scm (libnode)[arguments]: Delete phase
"patch-node-shebang".

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2021-01-20 22:34:04 +01:00
Pierre Neidhardt 683154166d
gnu: lisp-repl-core-dumper: Patch path to `cat'. 
* gnu/packages/lisp.scm (lisp-repl-core-dumper)[arguments]: Substitute calls
to `cat' with full store path.
 2021-01-20 20:39:36 +01:00
Nicolas Goaziou 2ec30608b2
gnu: Add solarus-quest-editor. 
* gnu/packages/games.scm (solarus-quest-editor): New variable.
(solarus): Add a comment about linked updates.
 2021-01-20 19:14:31 +01:00
Nicolas Goaziou 60f0ab5fce
gnu: solarus: Remove ".git" suffix from URL. 
* gnu/packages/games.scm (solarus)[source]: Remove ".git" suffix from URL.
 2021-01-20 18:39:03 +01:00
Nicolas Goaziou f866d59115
gnu: Add solarus. 
* gnu/packages/games.scm (solarus): New variable.
 2021-01-20 18:37:09 +01:00
Ricardo Wurmus ee3bae282b
gnu: r-fdrtool: Update to 1.2.16. 
* gnu/packages/statistics.scm (r-fdrtool): Update to 1.2.16.
 2021-01-20 17:19:10 +01:00
Ricardo Wurmus d964fb5f98
gnu: r-pbkrtest: Update to 0.5-0.1. 
* gnu/packages/statistics.scm (r-pbkrtest): Update to 0.5-0.1.
[propagated-inputs]: Add r-broom, r-dplyr, and r-numderiv.
[native-inputs]: Add r-knitr.
 2021-01-20 17:19:10 +01:00
Ricardo Wurmus 0d04f1e2b2
gnu: r-quantreg: Update to 5.82. 
* gnu/packages/statistics.scm (r-quantreg): Update to 5.82.
 2021-01-20 17:19:10 +01:00
Ricardo Wurmus 1ebff06434
gnu: r-rcppeigen: Update to 0.3.3.9.1. 
* gnu/packages/statistics.scm (r-rcppeigen): Update to 0.3.3.9.1.
 2021-01-20 17:19:10 +01:00
Ricardo Wurmus 125c65d729
gnu: r-vgam: Update to 1.1-5. 
* gnu/packages/statistics.scm (r-vgam): Update to 1.1-5.
 2021-01-20 17:19:10 +01:00
Ricardo Wurmus 4f8bfe296b
gnu: r-robustbase: Update to 0.93-7. 
* gnu/packages/statistics.scm (r-robustbase): Update to 0.93-7.
 2021-01-20 17:19:09 +01:00
Ricardo Wurmus 98794aef67
gnu: r-cowplot: Update to 1.1.1. 
* gnu/packages/statistics.scm (r-cowplot): Update to 1.1.1.
 2021-01-20 17:19:09 +01:00
Ricardo Wurmus 376f322988
gnu: r-sfsmisc: Update to 1.1-8. 
* gnu/packages/statistics.scm (r-sfsmisc): Update to 1.1-8.
 2021-01-20 17:19:09 +01:00
Ricardo Wurmus 04de103591
gnu: r-plotly: Update to 4.9.3. 
* gnu/packages/statistics.scm (r-plotly): Update to 4.9.3.
[propagated-inputs]: Remove r-hexbin; add r-vctrs.
 2021-01-20 17:19:09 +01:00
Ricardo Wurmus 8bcffe0c46
gnu: r-hexbin: Update to 1.28.2. 
* gnu/packages/statistics.scm (r-hexbin): Update to 1.28.2.
 2021-01-20 17:19:09 +01:00
Ricardo Wurmus ef921c3db7
gnu: r-glmnet: Update to 4.1. 
* gnu/packages/statistics.scm (r-glmnet): Update to 4.1.
 2021-01-20 17:19:09 +01:00
Ricardo Wurmus 770cf0759c
gnu: r-dt: Update to 0.17. 
* gnu/packages/statistics.scm (r-dt): Update to 0.17.
 2021-01-20 17:19:09 +01:00
Ricardo Wurmus 27edbeadb8
gnu: r-segmented: Update to 1.3-1. 
* gnu/packages/statistics.scm (r-segmented): Update to 1.3-1.
 2021-01-20 17:19:09 +01:00
Ricardo Wurmus a28aa533ba
gnu: r-rsqlite: Update to 2.2.2. 
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.2.2.
 2021-01-20 17:19:09 +01:00
Ricardo Wurmus 7a5adb9714
gnu: r-rmarkdown: Update to 2.6. 
* gnu/packages/statistics.scm (r-rmarkdown): Update to 2.6.
 2021-01-20 17:19:08 +01:00
Ricardo Wurmus b6958fdbfc
gnu: r-catools: Update to 1.18.1. 
* gnu/packages/statistics.scm (r-catools): Update to 1.18.1.
 2021-01-20 17:19:08 +01:00
Ricardo Wurmus 0ae1c85266
gnu: r-rcpparmadillo: Update to 0.10.1.2.2. 
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.10.1.2.2.
 2021-01-20 17:19:08 +01:00
Ricardo Wurmus 6dda661388
gnu: r-hms: Update to 1.0.0. 
* gnu/packages/statistics.scm (r-hms): Update to 1.0.0.
[propagated-inputs]: Add r-ellipsis and r-lifecycle.
 2021-01-20 17:19:08 +01:00
Ricardo Wurmus 1a1dfc99c8
gnu: r-withr: Update to 2.4.0. 
* gnu/packages/statistics.scm (r-withr): Update to 2.4.0.
 2021-01-20 17:19:08 +01:00
Ricardo Wurmus e25b88ab2e
gnu: r-git2r: Update to 0.28.0. 
* gnu/packages/statistics.scm (r-git2r): Update to 0.28.0.
 2021-01-20 17:19:08 +01:00
Ricardo Wurmus bf3979cb10
gnu: r-backports: Update to 1.2.1. 
* gnu/packages/statistics.scm (r-backports): Update to 1.2.1.
 2021-01-20 17:19:08 +01:00
Ricardo Wurmus 89000790ae
gnu: r-data-table: Update to 1.13.6. 
* gnu/packages/statistics.scm (r-data-table): Update to 1.13.6.
 2021-01-20 17:19:08 +01:00
Ricardo Wurmus 3204b481f7
gnu: r-dplyr: Update to 1.0.3. 
* gnu/packages/statistics.scm (r-dplyr): Update to 1.0.3.
 2021-01-20 17:19:08 +01:00
Ricardo Wurmus d266d87f6a
gnu: r-tibble: Update to 3.0.5. 
* gnu/packages/statistics.scm (r-tibble): Update to 3.0.5.
 2021-01-20 17:19:08 +01:00
Ricardo Wurmus 521b7db252
gnu: r-rlang: Update to 0.4.10. 
* gnu/packages/statistics.scm (r-rlang): Update to 0.4.10.
 2021-01-20 17:19:08 +01:00
Ricardo Wurmus cee5a27529
gnu: r-testthat: Update to 3.0.1. 
* gnu/packages/statistics.scm (r-testthat): Update to 3.0.1.
 2021-01-20 17:19:08 +01:00
Ricardo Wurmus a76d4f182a
gnu: r-bh: Update to 1.75.0-0. 
* gnu/packages/statistics.scm (r-bh): Update to 1.75.0-0.
 2021-01-20 17:19:07 +01:00
Ricardo Wurmus 132c91c433
gnu: r-dbi: Update to 1.1.1. 
* gnu/packages/statistics.scm (r-dbi): Update to 1.1.1.
[native-inputs]: Add r-knitr.
 2021-01-20 17:19:07 +01:00
Ricardo Wurmus aed08f62d9
gnu: r-gdtools: Update to 0.2.3. 
* gnu/packages/statistics.scm (r-gdtools): Update to 0.2.3.
 2021-01-20 17:19:07 +01:00
Ricardo Wurmus a7c27124eb
gnu: r-ggplot2: Update to 3.3.3. 
* gnu/packages/statistics.scm (r-ggplot2): Update to 3.3.3.
 2021-01-20 17:19:07 +01:00
Ricardo Wurmus 1e1edda31c
gnu: r-nlme: Update to 3.1-151. 
* gnu/packages/statistics.scm (r-nlme): Update to 3.1-151.
 2021-01-20 17:19:07 +01:00
Ricardo Wurmus 33184efac8
gnu: r-matrix: Update to 1.3-2. 
* gnu/packages/statistics.scm (r-matrix): Update to 1.3-2.
 2021-01-20 17:19:07 +01:00
Ricardo Wurmus 5f40f3edc8
gnu: r-mlr3misc: Update to 0.7.0. 
* gnu/packages/cran.scm (r-mlr3misc): Update to 0.7.0.
 2021-01-20 17:19:07 +01:00
Ricardo Wurmus 8eee252011
gnu: r-mlr3measures: Update to 0.3.1. 
* gnu/packages/cran.scm (r-mlr3measures): Update to 0.3.1.
 2021-01-20 17:19:07 +01:00
Ricardo Wurmus cf40cb0cc4
gnu: r-lgr: Update to 0.4.2. 
* gnu/packages/cran.scm (r-lgr): Update to 0.4.2.
[native-inputs]: Add r-knitr.
 2021-01-20 17:19:07 +01:00
Ricardo Wurmus 958b735189
gnu: r-calculus: Update to 0.3.0. 
* gnu/packages/cran.scm (r-calculus): Update to 0.3.0.
[native-inputs]: Add r-knitr.
 2021-01-20 17:19:07 +01:00
Ricardo Wurmus 6dacb2eee2
gnu: r-seurat: Update to 3.2.3. 
* gnu/packages/cran.scm (r-seurat): Update to 3.2.3.
[propagated-inputs]: Add r-scattermore.
 2021-01-20 17:19:07 +01:00
Ricardo Wurmus a0f9ce93b9
gnu: r-qtl2: Update to 0.24. 
* gnu/packages/cran.scm (r-qtl2): Update to 0.24.
 2021-01-20 17:19:07 +01:00
Ricardo Wurmus 8f7e204995
gnu: r-qtl: Update to 1.47-9. 
* gnu/packages/cran.scm (r-qtl): Update to 1.47-9.
 2021-01-20 17:19:07 +01:00