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157 Commits (55544d6ec053bacff5ca2af6388924472deba103)

Author SHA1 Message Date
Marius Bakke edbacab995
gnu: Use old setuptools in packages that relies on use_2to3 conversion.
This fixes a regression since 520cdf8058 where
the use_2to3 functionality was removed from setuptools.

* gnu/packages/graph.scm (python-louvain)[native-inputs]: Change from
PYTHON-SETUPTOOLS to PYTHON-SETUPTOOLS-57.
* gnu/packages/python-check.scm (python-parameterizedtestcase)[native-inputs]:
Likewise.
* gnu/packages/python-xyz.scm (python-anyjson)[native-inputs]: Add
PYTHON-SETUPTOOLS-57.
* gnu/packages/bioinformatics.scm (python-pyvcf)[native-inputs]: Change from
PYTHON-SETUPTOOLS-FOR-TENSORFLOW to PYTHON-SETUPTOOLS-57.
2023-01-07 21:04:26 +01:00
jgart 510e4583e0
gnu: Add python-pytest-parawtf.
* gnu/packages/python-check.scm (python-pytest-parawtf): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-11-29 08:38:29 +02:00
Sharlatan Hellseher c697ff9641
gnu: Add pytest-socket.
* gnu/packages/python-check.scm (python-pytest-socket): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2022-11-07 20:29:21 +01:00
Vagrant Cascadian 15ff5eebb6
gnu: Fix various lint issues in synopsis and descriptions.
* gnu/packages/android.scm (etc1tool)[synopsis]: Drop trailing period.
* gnu/packages/bioinformatics.scm (mudskipper)[synopsis]: Likewise.
* gnu/packages/crates-io.scm (rust-async-log-attributes-1)[synopsis]: Likewise.
  (rust-atomic-polyfill-1)[synopsis]: Likewise.
  (rust-modifier-0.1)[synopsis]: Likewise.
  (rust-openssl-macros-0.1)[synopsis]: Likewise.
  (rust-syn-mid-0.5)[synopsis]: Likewise.
  (rust-toml-edit-0.14)[synopsis]: Likewise.
  (rust-valuable-derive-0.1)[synopsis]: Likewise.
  (rust-inflections-1)[synopsis]: Likewise.
* gnu/packages/databases.scm (python-databases)[synopsis]: Likewise.
* gnu/packages/games.scm (liquidwar6)[synopsis]: Likewise.
* gnu/packages/golang.scm (go-golang.org-x-sync-errgroup)[synopsis]: Likewise.
* gnu/packages/guile-xyz.scm (guile-config)[synopsis]: Likewise.
* gnu/packages/haskell-web.scm (ghc-hxt-xpath)[synopsis]: Likewise.
* gnu/packages/haskell-xyz.scm (ghc-string-qq)[synopsis]: Likewise.
* gnu/packages/machine-learning.scm (python-lap)[synopsis]: Likewise.
  (python-pyro-api)[synopsis]: Likewise.
* gnu/packages/messaging.scm (python-librecaptcha)[synopsis]: Likewise.
* gnu/packages/python-check.scm (python-pytest-cram)[synopsis]: Likewise.
* gnu/packages/python-web.scm (python-jschema-to-python)[synopsis]: Likewise.
  (python-sarif-om)[synopsis]: Likewise.
  (python-socksio)[synopsis]: Likewise.
  (python-msrest)[synopsis]: Likewise.
* gnu/packages/tor.scm (torsocks)[synopsis]: Likewise.
* gnu/packages/cran.scm (r-rlist)[synopsis]: Remove leading article.
* gnu/packages/crates-io.scm (rust-clippy-lints-0.0.153)[synopsis]: Likewise.
  (rust-simplelog-0.11)[synopsis]: Likewise.
* gnu/packages/samba.scm (wsdd)[synopsis]: Likewise.
* gnu/packages/crates-io.scm (rust-spki-0.4)[synopsis]: Remove trailing
  whitespace.
* gnu/packages/golang.scm (go-github-com-mattn-go-zglob)[description]: Remove
  leading whitespace.
* gnu/packages/haskell-check.scm (ghc-crypto-cipher-tests)[description]:
  Likewise.
* gnu/packages/lisp-xyz.scm (sbcl-ctype)[synopsis]: Remove trailing
  whitespace.
* gnu/packages/mpi.scm (openmpi-thread-multiple)[description]: Remove leading
  whitespace.
* gnu/packages/node-xyz.scm (node-string-decoder)[synopsis]: Remove trailing
  whitespace.
2022-10-31 18:13:48 -07:00
Sharlatan Hellseher dd69af5ddc
gnu: python-pytest-astropy-header: Update to 0.2.2.
* gnu/packages/python-check.scm (python-pytest-astropy-header): Update
to 0.2.2.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2022-10-22 13:50:50 +02:00
Sharlatan Hellseher 1eaacdb6ad
gnu: python-pytest-astropy: Update to 0.10.0.
* gnu/packages/python-check.scm (python-pytest-astropy): Update to 0.10.0.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2022-10-22 13:50:50 +02:00
Marius Bakke ac1aace34e
gnu: python-pytest-benchmark: Update to 3.4.1.
* gnu/packages/python-check.scm (python-pytest-benchmark): Update to 3.4.1.
[arguments]: Add #:test-target.
[native-inputs]: Remove PYTHON-PATHLIB2.
2022-09-09 23:00:21 +02:00
Nicolas Graves 58974e7b19
gnu: python-tox: Build with tests.
* gnu/packages/python-check.scm (python-tox)[arguments]: Convert to list of
G-Expressions.  Drop #:tests?.  Add #:phases.
[native-inputs]: Add python-flaky, python-pathlib2, python-pytest-freezegun,
and python-pytest-timeout.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2022-09-01 13:44:36 +02:00
Nicolas Graves 3bf5a19609
gnu: python-tox: Move to python-check.
* gnu/packages/python-xyz.scm (python-tox): Move from here...
* gnu/packages/python-check.scm (python-tox): ... to here.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2022-09-01 11:50:02 +02:00
Tomasz Jeneralczyk e1ea628776
gnu: Add python-xvfbwrapper.
* gnu/packages/python-check.scm (python-xvfbwrapper): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-08-30 00:40:05 +02:00
Marius Bakke 7e0116740b
gnu: python-mypy: Update to 0.971.
* gnu/packages/patches/python-mypy-12332.patch,
gnu/packages/patches/python-mypy-use-sys-path.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/python-check.scm (python-mypy): Update to 0.971.
[source](patches): Remove.
[arguments]: Skip one test.
2022-08-16 00:43:43 +02:00
Hartmut Goebel b4714ef05e
gnu: python-stestr: Update to 3.2.1.
* gnu/packages/python-check.scm (python-stestr): Update to 3.2.1.
2022-08-10 09:34:12 +02:00
Ricardo Wurmus e56b07663c
gnu: Add python-pytest-cram.
* gnu/packages/python-check.scm (python-pytest-cram): New variable.
2022-07-08 18:41:35 +02:00
Julien Lepiller 06902a6766
gnu: Add python-pycotap.
* gnu/packages/python-check.scm (python-pycotap): New variable.

Co-authored-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2022-06-23 22:45:07 -04:00
Hartmut Goebel 9ee6d9cb17
gnu: Add python-pytest-httpx.
* gnu/packages/python-check.scm (python-pytest-httpx): New variable.
2022-06-16 09:25:55 +02:00
Maxim Cournoyer 937094b75c
gnu: python-xunitparser: Update to 1.3.4.
* gnu/packages/python-check.scm (python-xunitparser): Update to 1.3.4.
2022-06-07 09:11:55 -04:00
Maxim Cournoyer 1475672e5f
gnu: Add python-avocado-framework.
* gnu/packages/python-check.scm (python-avocado-framework): New variable.
2022-05-31 14:53:40 -04:00
Ricardo Wurmus 04ed3821cc
gnu: Add python-test-utils.
* gnu/packages/python-check.scm (python-test-utils): New variable.
2022-05-20 10:06:36 +02:00
Lars-Dominik Braun ba4ed74f9e
gnu: python-pytest-sanic: Update to 1.9.1.
* gnu/packages/python-check.scm (python-pytest-sanic): Update to 1.9.1.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2022-05-12 12:46:13 -04:00
Maxim Cournoyer 4d62953573
gnu: Add python-nptyping.
* gnu/packages/python-check.scm (python-nptyping): New variable.
2022-05-12 12:46:09 -04:00
Maxim Cournoyer 50b620f119
gnu: Add python-beartype.
* gnu/packages/python-check.scm (python-beartype): New variable.
2022-05-12 12:46:09 -04:00
Maxim Cournoyer d72c53fa43
gnu: python-nbval: Fix build.
* gnu/packages/python-check.scm (python-nbval)
[phases]: Delete trailing #t.
{check}: Skip newly failing 'test_conf_ignore_stderr' test.  Remove INPUTS and
OUTPUTS arguments.  Add TESTS? and honor it.
2022-05-12 12:45:46 -04:00
Maxim Cournoyer 8194b36ddf
gnu: Add python-pytest-tornado.
* gnu/packages/python-check.scm (python-pytest-tornado): New variable.
2022-05-12 12:45:44 -04:00
Maxim Cournoyer f2be0c5b2b
gnu: python-pytest-shutil: Adjust to use python-path.
* gnu/packages/python-check.scm (python-pytest-shutil)
[phases]{use-path-instead-of-path.py}: New phase.
[propagated-inputs]: Replace python-path.py with python-path.
2022-05-12 12:45:36 -04:00
Maxim Cournoyer 529318bd22
gnu: python-pytest-checkdocs: Update to 2.7.1.
* gnu/packages/python-check.scm (python-pytest-checkdocs): Update to 2.7.1.
2022-05-12 12:45:31 -04:00
Maxim Cournoyer c29f9f72cd
gnu: python-mypy: Update to 0.942 and fix search path.
* gnu/packages/patches/python-mypy-use-sys-path.patch: New patch.
* gnu/local.mk: Register it.
* gnu/packages/python-check.scm (python-mypy): Update to 0.942.
[source]: Apply patch.
2022-05-12 12:45:30 -04:00
Felix Gruber 919fdd6fcc
gnu: Add python-sybil.
* gnu/packages/python-check.scm (python-sybil): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-02 15:14:45 +02:00
Ricardo Wurmus a5412de56e
gnu: Add python-parameterizedtestcase.
* gnu/packages/python-check.scm (python-parameterizedtestcase): New variable.
2022-04-11 15:39:29 +02:00
Malte Frank Gerdes 504dd8b696
gnu: Add python-pyinstrument.
* gnu/packages/python-check.scm (python-pyinstrument): New variable.

Co-authored-by: Guillaume Le Vaillant <glv@posteo.net>
2022-04-07 18:35:38 +02:00
itd 2b315fe020
gnu: python-mypy: Fix test errors on i686-linux.
* gnu/packages/patches/python-mypy-12332.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python-check.scm (python-mypy)[source]<origin>: Use patch
"python-mypy-12332.patch" to avoid overflow issues resulting in test failures.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-03-19 23:08:57 +01:00
Leo Famulari 262a1734e2
gnu: python-pytest-qt: Remove a transitive dependency on QtWebKit.
See <https://issues.guix.gnu.org/53289> for more information about this change.

* gnu/packages/python-check.scm (python-pytest-qt)[propagated-inputs]:
Replace python-pyqt with python-pyqt-without-qtwebkit.
2022-01-28 14:03:03 -05:00
Marius Bakke 22acec0588
gnu: Add python-cucumber-tag-expressions.
* gnu/packages/python-check.scm (python-cucumber-tag-expressions): New variable.
2022-01-22 10:23:01 +01:00
Marius Bakke 36481d00de
gnu: Add python-pytest-metadata.
* gnu/packages/python-check.scm (python-pytest-metadata): New variable.
2022-01-22 10:23:01 +01:00
Marius Bakke 16f9ca544d
gnu: python-mypy: Update to 0.931.
* gnu/packages/python-check.scm (python-mypy): Update to 0.931.
[native-inputs]: Remove PYTHON-FLAKE8, PYTHON-FLAKE8-BUGBEAR,
PYTHON-FLAKE8-PYI, PYTHON-IMPORTLIB-METADATA, and PYTHON-PYTEST-COV.
[propagated-inputs]: Remove PYTHON-TYPED-AST.  Replace PYTHON-TOML with
PYTHON-TOMLI.
2022-01-22 10:23:00 +01:00
Vinicius Monego 8fdd984f9c
gnu: python-pytest-pycodestyle: Update to 2.2.0.
* gnu/packages/python-check.scm (python-pytest-pycodestyle): Update to 2.2.0.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2022-01-14 21:29:58 +01:00
Vinicius Monego 6aa5d54a1c
gnu: Add python-pytest-pydocstyle.
* gnu/packages/python-check.scm (python-pytest-pydocstyle): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2022-01-14 21:29:51 +01:00
Vinicius Monego 3d2ea6a50b
gnu: Add python-pytest-doctest-custom.
* gnu/packages/python-check.scm (python-pytest-doctest-custom): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2022-01-11 18:07:30 +01:00
Vagrant Cascadian 38376090c3
gnu: Remove trailing period from synopsis.
* gnu/packages/anddroid.scm (android-liblog, git-repo)[synopsis]: Remove
  trailing period.
* gnu/packages/audio.scm (audio-to-midi)[synopsis]: Likewise.
* gnu/packages/bioinformatics.scm (python-mygene, python-scanpy,
  nanosv)[synopsis]: Likewise.
* gnu/packages/cran.scm (r-gsubfn)[synopsis]: Likewise.
* gnu/packages/crates-io.scm (rust-ascii-1, rust-bindgen-0.59,
  rust-byte-unit-4, rust-clircle-0.3, rust-dashmap-4, rust-dhcp4r-0.2,
  rust-fast-float-0.2, rust-fst-0.4, rust-futures-core-preview-0.3,
  rust-http-types-2, rust-hyper-0.14, rust-indexmap-1,
  rust-minimal-lexical-0.1, rust-oorandom-11.1, rust-runtime-raw-0.3,
  rust-sharded-slab-0.1, rust-takeable-option-0.4, rust-tower-service-0.3,
  rust-ttf-parser-0.12)[synopsis]: Likewise.
* gnu/packages/disk.scm (f3)[synopsis]: Likewise.
* gnu/packages/emacs-xyz.scm (emacs-scribble-mode, emacs-psession)[synopsis]:
  Likewise.
* gnu/packages/golang.scm (go-github-com-kylelemons-godebug)[synopsis]:
  Likewise.
* gnu/packages/haskell-xyz.scm (ghc-fsnotify, ghc-libyaml, ghc-emojis,
  ghc-regex-tdfa, ghc-th-lift-instances, ghc-commonmark-pandoc)[synopsis]:
  Likewise.
* gnu/packages/java.scm (java-commons-jxpath, java-jakarta-regexp)[synopsis]:
  Likewise.
* gnu/packages/lisp-xyz.scm (sbcl-cl-annot, sbcl-envy)[synopsis]: Likewise.
* gnu/packages/mail.scm (go-gitlab.com-shackra-goimapnotify)[synopsis]:
  Likewise.
* gnu/packages/maven.scm (maven-wagon-http-shared,
  maven-surefire-plugin)[synopsis]: Likewise.
* gnu/packages/perl.scm (perl-text-soundex)[synopsis]: Likewise.
* gnu/packages/python-check.scm (python-httmock)[synopsis]: Likewise.
* gnu/packages/python-web.scm (python-bottle)[synopsis]: Likewise.
* gnu/packages/python-xyz.scm (python-olefile, python-tokenize-rt,
  python-pylzma)[synopsis]: Likewise.
* gnu/packages/tex.scm (texlive-docstrip)[synopsis]: Likewise.
2021-12-30 19:11:46 -08:00
Leo Famulari c9c7b0e127
Revert "gnu: Add python-pytest-rerunfailures."
This added a duplicate package definition.

This reverts commit 51e26b297c.
2021-12-26 18:38:11 -05:00
Vinicius Monego f6aa994a74
gnu: Add python-pytest-celery.
* gnu/packages/python-check.scm (python-pytest-celery): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-12-27 00:00:41 +01:00
Vinicius Monego 51e26b297c
gnu: Add python-pytest-rerunfailures.
* gnu/packages/python-check.scm (python-pytest-rerunfailures): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-12-27 00:00:20 +01:00
Vinicius Monego 9665660e4b
gnu: Add python-pytest-subtests.
* gnu/packages/python-check.scm (python-pytest-subtests): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-12-27 00:00:02 +01:00
Vinicius Monego 8923e7de0a
gnu: python-pytest-doctestplus: Honor #:tests?.
* gnu/packages/python-check.scm (python-pytest-doctestplus): Honor #:tests? in
the custom 'check phase.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-12-26 21:41:59 +01:00
Vinicius Monego b5f990da9c
gnu: python-pytest-doctestplus: Update to 0.11.2.
* gnu/packages/python-check.scm (python-pytest-doctestplus): Update to
0.11.2.
[arguments]<#:phases>: In the custom 'check phase, skip tests that require
remote data.
[native-inputs]: Add python-setuptools-scm.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-12-26 21:41:49 +01:00
Vinicius Monego 8a4d3bd91f
gnu: python-pytest-arraydiff: Fix 'sanity-check phase.
* gnu/packages/python-check.scm (python-pytest-arraydiff)[native-inputs]: Add
python-pytest.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-12-26 21:41:38 +01:00
Marius Bakke ee4561b08e
gnu: python-vcrpy: Fix test failure.
* gnu/packages/python-check.scm (python-vcrpy)[arguments]: Don't override
PYTHONPATH.
2021-12-16 22:21:13 +01:00
Ludovic Courtès e3196755e6
gnu: Further simplify package inputs.
This is the result of running:

  ./pre-inst-env guix style --input-simplification=safe

and manually undoing changes on a dozen of packages to reduce
rebuilds (derivations for emacs, icecat, and libreoffice are unchanged.)
2021-12-13 22:15:07 +01:00
Ludovic Courtès 8394619bac
gnu: Simplify package inputs.
This commit was obtained by running:

  ./pre-inst-env guix style

without any additional argument.
2021-12-13 17:48:25 +01:00
Ludovic Courtès 1052ae5f03
Merge branch 'master' into core-updates-frozen 2021-12-13 11:49:15 +01:00
Giacomo Leidi 7e9720eca4
gnu: python-vcrpy: Update to 4.1.1.
* gnu/packages/python-xyz.scm (python-vcrpy): Update to 4.1.1.
[arguments]: Replace 'check phase to run unit tests.
[native-inputs]: Add required dependencies.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-12-12 00:27:54 +01:00