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109025 Commits (57495d063587e9301feddbe051abe2f97ca038be)

Author SHA1 Message Date
Ricardo Wurmus f72edb3937
gnu: r-tinytex: Update to 0.44.
* gnu/packages/cran.scm (r-tinytex): Update to 0.44.
2023-02-18 19:56:33 +01:00
Ricardo Wurmus f66564248c
gnu: r-vctrs: Update to 0.5.2.
* gnu/packages/cran.scm (r-vctrs): Update to 0.5.2.
2023-02-18 19:56:33 +01:00
Ricardo Wurmus 63aa70ffc4
gnu: r-utf8: Update to 1.2.3.
* gnu/packages/cran.scm (r-utf8): Update to 1.2.3.
2023-02-18 19:56:33 +01:00
Ricardo Wurmus 214346c609
gnu: r-xfun: Update to 0.37.
* gnu/packages/cran.scm (r-xfun): Update to 0.37.
2023-02-18 19:56:33 +01:00
Ricardo Wurmus 1113985a77
gnu: r-tsp: Update to 1.2-2.
* gnu/packages/cran.scm (r-tsp): Update to 1.2-2.
2023-02-18 19:56:33 +01:00
Ricardo Wurmus 7aaacd3f31
gnu: r-cli: Update to 3.6.0.
* gnu/packages/cran.scm (r-cli): Update to 3.6.0.
2023-02-18 19:56:32 +01:00
Ricardo Wurmus 0c6d303ae7
gnu: r-vcd: Update to 1.4-11.
* gnu/packages/cran.scm (r-vcd): Update to 1.4-11.
2023-02-18 19:56:32 +01:00
Ricardo Wurmus e9048fb209
gnu: r-smurf: Update to 1.1.4.
* gnu/packages/cran.scm (r-smurf): Update to 1.1.4.
2023-02-18 19:56:32 +01:00
Ricardo Wurmus e91463c9ac
gnu: r-ggrepel: Update to 0.9.3.
* gnu/packages/cran.scm (r-ggrepel): Update to 0.9.3.
[propagated-inputs]: Add r-withr.
2023-02-18 19:56:32 +01:00
Ricardo Wurmus 2a0d4733e3
gnu: r-recipes: Update to 1.0.4.
* gnu/packages/cran.scm (r-recipes): Update to 1.0.4.
2023-02-18 19:56:32 +01:00
Ricardo Wurmus b02c6d2583
gnu: r-broom: Update to 1.0.3.
* gnu/packages/cran.scm (r-broom): Update to 1.0.3.
2023-02-18 19:56:32 +01:00
Ricardo Wurmus 0114596dae
gnu: r-geometry: Update to 0.4.7.
* gnu/packages/cran.scm (r-geometry): Update to 0.4.7.
2023-02-18 19:56:32 +01:00
Ricardo Wurmus 61f15b7f48
gnu: r-rpostgres: Update to 1.4.5.
* gnu/packages/cran.scm (r-rpostgres): Update to 1.4.5.
2023-02-18 19:56:32 +01:00
Ricardo Wurmus 485bdfd7d0
gnu: r-timechange: Update to 0.2.0.
* gnu/packages/cran.scm (r-timechange): Update to 0.2.0.
2023-02-18 19:56:32 +01:00
Ricardo Wurmus 76f2fbeae0
gnu: r-progressr: Update to 0.13.0.
* gnu/packages/cran.scm (r-progressr): Update to 0.13.0.
2023-02-18 19:56:32 +01:00
Ricardo Wurmus 19353560c5
gnu: r-lpsolve: Update to 5.6.18.
* gnu/packages/cran.scm (r-lpsolve): Update to 5.6.18.
2023-02-18 19:56:31 +01:00
Ricardo Wurmus 82a684e538
gnu: r-sp: Update to 1.6-0.
* gnu/packages/cran.scm (r-sp): Update to 1.6-0.
2023-02-18 19:56:31 +01:00
Ricardo Wurmus 34be3e5a06
gnu: r-ff: Update to 4.0.9.
* gnu/packages/cran.scm (r-ff): Update to 4.0.9.
2023-02-18 19:56:31 +01:00
Ricardo Wurmus 0adddb6afd
gnu: r-rcpp: Update to 1.0.10.
* gnu/packages/cran.scm (r-rcpp): Update to 1.0.10.
2023-02-18 19:56:31 +01:00
Ricardo Wurmus b51965e445
gnu: r-colorspace: Update to 2.1-0.
* gnu/packages/cran.scm (r-colorspace): Update to 2.1-0.
2023-02-18 19:56:31 +01:00
Ricardo Wurmus 2674b55446
gnu: r-mapproj: Update to 1.2.11.
* gnu/packages/cran.scm (r-mapproj): Update to 1.2.11.
2023-02-18 19:56:31 +01:00
Ricardo Wurmus 8fadc29d3d
gnu: r-sass: Update to 0.4.5.
* gnu/packages/cran.scm (r-sass): Update to 0.4.5.
2023-02-18 19:56:31 +01:00
Ricardo Wurmus 3d3c264ac5
gnu: r-curl: Update to 5.0.0.
* gnu/packages/cran.scm (r-curl): Update to 5.0.0.
2023-02-18 19:56:31 +01:00
Ricardo Wurmus 9c308e864e
gnu: r-httpuv: Update to 1.6.8.
* gnu/packages/cran.scm (r-httpuv): Update to 1.6.8.
2023-02-18 19:56:31 +01:00
Ricardo Wurmus 31e137465d
gnu: r-astsa: Update to 2.0.
* gnu/packages/cran.scm (r-astsa): Update to 2.0.
2023-02-18 19:56:31 +01:00
Ricardo Wurmus e78754a7ca
gnu: r-ggpp: Update to 0.5.1.
* gnu/packages/cran.scm (r-ggpp): Update to 0.5.1.
2023-02-18 19:56:31 +01:00
Ricardo Wurmus 1ff96c7db3
gnu: r-ggalluvial: Update to 0.12.4.
* gnu/packages/cran.scm (r-ggalluvial): Update to 0.12.4.
2023-02-18 19:56:31 +01:00
Ricardo Wurmus d7ac85d4e3
gnu: r-fontawesome: Update to 0.5.0.
* gnu/packages/cran.scm (r-fontawesome): Update to 0.5.0.
2023-02-18 19:56:30 +01:00
Ricardo Wurmus 0b78144688
gnu: r-abn: Update to 2.7-3.
* gnu/packages/bioconductor.scm (r-abn): Update to 2.7-3.
2023-02-18 19:56:30 +01:00
Ricardo Wurmus 854fea4618
gnu: r-wgcna: Update to 1.72-1.
* gnu/packages/bioconductor.scm (r-wgcna): Update to 1.72-1.
2023-02-18 19:56:30 +01:00
Ricardo Wurmus 7d01489a9f
gnu: r-d3r: Update to 1.0.1.
* gnu/packages/cran.scm (r-d3r): Update to 1.0.1.
[source]: Delete minified JavaScript in snippet.
[arguments]: Do not delete minified JavaScript here.
[native-inputs]: Update hash for d3.v7.js.
2023-02-18 19:56:30 +01:00
Ricardo Wurmus 41c41e9f81
gnu: r-sendmailr: Update to 1.4-0.
* gnu/packages/statistics.scm (r-sendmailr): Update to 1.4-0.
[native-inputs]: Add r-knitr.
2023-02-18 19:56:30 +01:00
Ricardo Wurmus 6a3144bd27
gnu: Add r-gfonts.
* gnu/packages/cran.scm (r-gfonts): New variable.
2023-02-18 19:56:30 +01:00
Ricardo Wurmus 2b9cb13796
gnu: r-torch: Update to 0.9.1.
* gnu/packages/cran.scm (r-torch): Update to 0.9.1.
[propagated-inputs]: Add r-glue.
2023-02-18 19:56:30 +01:00
Ricardo Wurmus 344f448d1d
gnu: liblantern: Update to 0.9.1.
* gnu/packages/machine-learning.scm (liblantern): Update to 0.9.1.
2023-02-18 19:56:30 +01:00
Ricardo Wurmus 16e0c98df7
gnu: r-flexdashboard: Update to 0.6.1.
* gnu/packages/cran.scm (r-flexdashboard): Update to 0.6.1.
[source]: Simplify and reformat snippet.
[arguments]: Remove unnecessary module import; use esbuild in
'process-javascript phase.
[native-inputs]: Replace node-uglify-js with esbuild.
2023-02-18 19:56:30 +01:00
Ricardo Wurmus 8525c26499
import/cran: Remove directory-needs-zlib? in favor of needed-libraries-in-directory.
* guix/import/cran.scm (directory-needs-zlib?): Remove procedure.
(source-dir->dependencies): Use needed-libraries-in-directory instead of
directory-needs-zlib?.
2023-02-18 19:56:30 +01:00
Ricardo Wurmus 049cff91ac
import/cran: Add generic way to detect needed libraries.
* guix/import/cran.scm (needed-libraries-in-directory): New procedure.
(libraries-pattern, packages-for-matches): New variables.
2023-02-18 19:56:30 +01:00
Ricardo Wurmus 271c0bfcf2
import/cran: Process all vignette builders.
* guix/import/cran.scm (needs-knitr?): Remove procedure.
(vignette-builders): New procedure.
(description->package): Use vignette-builders instead of needs-knitr?.
2023-02-18 19:56:30 +01:00
Ricardo Wurmus c0507e9f1e
import/cran: Add name mapping for libjpeg.
* guix/import/cran.scm (transform-sysname): Add mapping from libjpeg to
libjpeg-turbo.
2023-02-18 19:56:29 +01:00
Ricardo Wurmus 6ce68a7a83
import/cran: Add directory-needs-esbuild?.
* guix/import/cran.scm (directory-needs-esbuild?): New procedure.
(source-dir->dependencies): Use it.
2023-02-18 19:56:29 +01:00
Ricardo Wurmus ce7e4b99f9
gnu: r-readods: Update to 1.8.0.
* gnu/packages/cran.scm (r-readods): Update to 1.8.0.
[propagated-inputs]: Add r-purrr.
[description]: Use complete sentences.
2023-02-18 19:56:29 +01:00
Ricardo Wurmus ab0e14c41a
gnu: r-liger: Rename to r-rliger.
Upstream changed the name to avoid a conflict with the liger package in CRAN.

* gnu/packages/cran.scm (r-liger): Define as a deprecated alias for...
(r-rliger): ...this new variable.
2023-02-18 19:56:29 +01:00
Tobias Geerinckx-Rice b795976778
gnu: bcachefs-tools: Update to 0.1-16.46a6b92.
* gnu/packages/file-systems.scm (bcachefs-tools):
Update to 0.1-16.46a6b92.
2023-02-12 01:00:00 +01:00
Tobias Geerinckx-Rice 0fbff222c4
gnu: julia: Fix build.
This follows up on commit 8d8e1438ae.

* gnu/packages/julia.scm (julia)[arguments]: Substitute* libgit2 version.

Reported by francismb <francismb@email.de>.
2023-02-12 01:00:00 +01:00
Tobias Geerinckx-Rice 7ce9fe86a2
gnu: corefreq: Update to 1.95.2.
* gnu/packages/linux.scm (corefreq): Update to 1.95.2.
2023-02-12 01:00:00 +01:00
Liliana Marie Prikler 2fb42567eb
gnu: komikku: Update to 1.11.1.
* gnu/packages/gnome.scm (komikku): Update to 1.11.1.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-02-18 12:36:11 +01:00
Michael Rohleder d292a63cdb
gnu: distrobox: Skip substitution in man pages.
* gnu/packages/containers.scm (distrobox)[arguments]: Change refer-to-inputs
phase to not substitute in man pages.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-02-18 12:36:11 +01:00
Yovan Naumovski a4b5876a77
gnu: openttd-engine: Update to 13.0.
* gnu/packages/games.scm (openttd-engine): Update to 13.0.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-02-18 12:36:10 +01:00
Sughosha via Guix-patches via 39c50eb495
gnu: Add nwg-launchers.
* gnu/packages/xdisorg.scm (nwg-launchers): New variable.

Co-authored-by: florhizome <florhizome@posteo.net>
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-02-18 12:36:10 +01:00