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3469 Commits (595b75e05c149f4c99a40fbf6b573cb9c54369f6)

Author SHA1 Message Date
Roel Janssen 416eaacbb1
gnu: Add r-locfdr. 
* gnu/packages/cran.scm (r-locfdr): New variable.
 2021-05-26 22:49:45 +02:00
Roel Janssen 84d551d45e
gnu: Add r-howmany. 
* gnu/packages/cran.scm (r-howmany): New variable.
 2021-05-26 22:46:06 +02:00
Roel Janssen b7664dfb78
gnu: Add r-rnexml. 
* gnu/packages/cran.scm (r-rnexml): New variable.
 2021-05-26 21:54:13 +02:00
Roel Janssen 4fa12759f5
gnu: Add r-visdat. 
* gnu/packages/cran.scm (r-visdat): New variable.
 2021-05-26 16:59:17 +02:00
Roel Janssen 315472eddd
gnu: Add r-heatmap3. 
* gnu/packages/cran.scm (r-heatmap3): New variable.
 2021-05-26 16:35:25 +02:00
Roel Janssen 64eda9c881
gnu: Add r-tree. 
* gnu/packages/cran.scm (r-tree): New variable.
 2021-05-26 16:32:25 +02:00
Roel Janssen d80cb98b86
gnu: Add r-rnmf. 
* gnu/packages/cran.scm (r-rnmf): New variable.
 2021-05-26 16:25:06 +02:00
Roel Janssen c662485287
gnu: Add r-depmixs4. 
* gnu/packages/cran.scm (r-depmixs4): New variable.
 2021-05-26 16:21:13 +02:00
Roel Janssen cd5d1df152
gnu: Add r-hiddenmarkov. 
* gnu/packages/cran.scm (r-hiddenmarkov): New variable.
 2021-05-26 16:17:06 +02:00
Roel Janssen f5282a1738
gnu: Add r-rcppnumerical. 
* gnu/packages/cran.scm (r-rcppnumerical): New variable.
 2021-05-26 15:37:43 +02:00
Lars-Dominik Braun fef452b13f
gnu: Add r-hypergeo. 
* gnu/packages/cran.scm (r-hypergeo): New variable.
 2021-05-26 14:05:15 +02:00
Lars-Dominik Braun 1af2da50bf
gnu: Add r-elliptic. 
* gnu/packages/cran.scm (r-elliptic): New variable.
 2021-05-26 14:05:15 +02:00
Lars-Dominik Braun 1ae67e6735
gnu: Add r-contfrac. 
* gnu/packages/cran.scm (r-contfrac): New variable.
 2021-05-26 14:05:15 +02:00
Roel Janssen 5aa68a9408
gnu: Add r-model4you. 
* gnu/packages/cran.scm (r-model4you): New variable.
 2021-05-26 10:00:51 +02:00
Roel Janssen 3f2a4b0980
gnu: Add r-pvclust. 
* gnu/packages/cran.scm (r-pvclust): New variable.
 2021-05-26 09:52:12 +02:00
Ricardo Wurmus cb0ea86dcb
gnu: r-pdftools: Update to 3.0.1. 
* gnu/packages/cran.scm (r-pdftools): Update to 3.0.1.
 2021-05-20 10:58:17 +02:00
Ricardo Wurmus 7361897630
gnu: r-textshaping: Update to 0.3.4. 
* gnu/packages/cran.scm (r-textshaping): Update to 0.3.4.
 2021-05-20 10:58:17 +02:00
Ricardo Wurmus 0df3c20243
gnu: r-seuratobject: Update to 4.0.1. 
* gnu/packages/cran.scm (r-seuratobject): Update to 4.0.1.
[propagated-inputs]: Remove r-sctransform.
 2021-05-20 10:58:17 +02:00
Ricardo Wurmus 428fda3587
gnu: r-rsample: Update to 0.1.0. 
* gnu/packages/cran.scm (r-rsample): Update to 0.1.0.
[propagated-inputs]: Add r-lifecycle.
 2021-05-20 10:58:17 +02:00
Ricardo Wurmus e033e7c7d4
gnu: r-clusterr: Update to 1.2.4. 
* gnu/packages/cran.scm (r-clusterr): Update to 1.2.4.
 2021-05-20 10:58:17 +02:00
Ricardo Wurmus 65c01f0abb
gnu: r-rfast: Update to 2.0.3. 
* gnu/packages/cran.scm (r-rfast): Update to 2.0.3.
 2021-05-20 10:58:17 +02:00
Ricardo Wurmus 99bdcea1ea
gnu: r-oai: Update to 0.3.2. 
* gnu/packages/cran.scm (r-oai): Update to 0.3.2.
[native-inputs]: Add r-knitr.
 2021-05-20 10:58:17 +02:00
Ricardo Wurmus e928599671
gnu: r-proxyc: Update to 0.2.0. 
* gnu/packages/cran.scm (r-proxyc): Update to 0.2.0.
 2021-05-20 10:58:17 +02:00
Ricardo Wurmus 630239af23
gnu: r-caret: Update to 6.0-88. 
* gnu/packages/cran.scm (r-caret): Update to 6.0-88.
 2021-05-20 10:58:16 +02:00
Ricardo Wurmus 87bc2e125f
gnu: r-bio3d: Update to 2.4-2. 
* gnu/packages/cran.scm (r-bio3d): Update to 2.4-2.
[native-inputs]: Add r-knitr.
 2021-05-20 10:58:16 +02:00
Ricardo Wurmus 6d73b27e45
gnu: r-terra: Update to 1.2-10. 
* gnu/packages/cran.scm (r-terra): Update to 1.2-10.
 2021-05-20 10:58:16 +02:00
Ricardo Wurmus 1ab7a734ff
gnu: r-systemfonts: Update to 1.0.2. 
* gnu/packages/cran.scm (r-systemfonts): Update to 1.0.2.
 2021-05-20 10:58:16 +02:00
Ricardo Wurmus 3dc2e7b082
gnu: r-ibreakdown: Update to 2.0.1. 
* gnu/packages/cran.scm (r-ibreakdown): Update to 2.0.1.
 2021-05-20 10:58:16 +02:00
Ricardo Wurmus 8c1e07a266
gnu: r-ggplotify: Update to 0.0.7. 
* gnu/packages/cran.scm (r-ggplotify): Update to 0.0.7.
 2021-05-20 10:58:16 +02:00
Ricardo Wurmus 72a4b4e34f
gnu: r-msigdbr: Update to 7.4.1. 
* gnu/packages/cran.scm (r-msigdbr): Update to 7.4.1.
[propagated-inputs]: Add r-babelgene.
 2021-05-20 10:58:16 +02:00
Ricardo Wurmus 76cccb0971
gnu: r-pegas: Update to 1.0-1. 
* gnu/packages/cran.scm (r-pegas): Update to 1.0-1.
 2021-05-20 10:58:16 +02:00
Ricardo Wurmus da372ae603
gnu: r-valr: Update to 0.6.3. 
* gnu/packages/cran.scm (r-valr): Update to 0.6.3.
 2021-05-20 10:58:16 +02:00
Ricardo Wurmus bb5cc6548e
gnu: r-irkernel: Update to 1.2. 
* gnu/packages/cran.scm (r-irkernel): Update to 1.2.
 2021-05-20 10:58:16 +02:00
Ricardo Wurmus c787a71189
gnu: r-fields: Update to 12.3. 
* gnu/packages/cran.scm (r-fields): Update to 12.3.
[propagated-inputs]: Add r-viridis.
 2021-05-20 10:58:16 +02:00
Ricardo Wurmus c1648123c2
gnu: r-rnifti: Update to 1.3.1. 
* gnu/packages/cran.scm (r-rnifti): Update to 1.3.1.
 2021-05-20 10:58:16 +02:00
Ricardo Wurmus ecf62c7321
gnu: r-softimpute: Update to 1.4-1. 
* gnu/packages/cran.scm (r-softimpute): Update to 1.4-1.
[native-inputs]: Add r-knitr.
 2021-05-20 10:58:16 +02:00
Ricardo Wurmus ad88775716
gnu: r-fmsb: Update to 0.7.1. 
* gnu/packages/cran.scm (r-fmsb): Update to 0.7.1.
 2021-05-20 10:58:16 +02:00
Ricardo Wurmus 2620a65479
gnu: r-ouch: Update to 2.17. 
* gnu/packages/cran.scm (r-ouch): Update to 2.17.
 2021-05-20 10:58:16 +02:00
Ricardo Wurmus 4341da5882
gnu: r-biocmanager: Update to 1.30.15. 
* gnu/packages/cran.scm (r-biocmanager): Update to 1.30.15.
 2021-05-20 10:58:15 +02:00
Ricardo Wurmus cd488787af
gnu: r-rcppparallel: Update to 5.1.4. 
* gnu/packages/cran.scm (r-rcppparallel): Update to 5.1.4.
 2021-05-20 10:58:15 +02:00
Ricardo Wurmus d381b1ac33
gnu: r-performance: Update to 0.7.2. 
* gnu/packages/cran.scm (r-performance): Update to 0.7.2.
 2021-05-20 10:58:15 +02:00
Ricardo Wurmus dd99de3f13
gnu: r-sandwich: Update to 3.0-1. 
* gnu/packages/cran.scm (r-sandwich): Update to 3.0-1.
 2021-05-20 10:58:15 +02:00
Ricardo Wurmus e35482dde9
gnu: r-flextable: Update to 0.6.6. 
* gnu/packages/cran.scm (r-flextable): Update to 0.6.6.
 2021-05-20 10:58:15 +02:00
Ricardo Wurmus 6ea508485b
gnu: r-sjmisc: Update to 2.8.7. 
* gnu/packages/cran.scm (r-sjmisc): Update to 2.8.7.
 2021-05-20 10:58:15 +02:00
Ricardo Wurmus f03f45c927
gnu: r-sjlabelled: Update to 1.1.8. 
* gnu/packages/cran.scm (r-sjlabelled): Update to 1.1.8.
 2021-05-20 10:58:15 +02:00
Ricardo Wurmus f2b9129d21
gnu: r-insight: Update to 0.14.0. 
* gnu/packages/cran.scm (r-insight): Update to 0.14.0.
 2021-05-20 10:58:15 +02:00
Ricardo Wurmus ada22a989c
gnu: r-overlap: Update to 0.3.4. 
* gnu/packages/cran.scm (r-overlap): Update to 0.3.4.
 2021-05-20 10:58:15 +02:00
Ricardo Wurmus 033977f7fb
gnu: r-arules: Update to 1.6-8. 
* gnu/packages/cran.scm (r-arules): Update to 1.6-8.
 2021-05-20 10:58:15 +02:00
Ricardo Wurmus 5072b7b42a
gnu: r-cubature: Update to 2.0.4.2. 
* gnu/packages/cran.scm (r-cubature): Update to 2.0.4.2.
 2021-05-20 10:58:15 +02:00
Ricardo Wurmus 1bccefef85
gnu: r-pillar: Update to 1.6.1. 
* gnu/packages/cran.scm (r-pillar): Update to 1.6.1.
 2021-05-20 10:58:15 +02:00
Ricardo Wurmus c479174108
gnu: r-xfun: Update to 0.23. 
* gnu/packages/cran.scm (r-xfun): Update to 0.23.
 2021-05-20 10:58:15 +02:00
Ricardo Wurmus 48024ed634
gnu: r-corrplot: Update to 0.88. 
* gnu/packages/cran.scm (r-corrplot): Update to 0.88.
[native-inputs]: Add r-knitr.
 2021-05-20 10:58:15 +02:00
Ricardo Wurmus 31d01cf1e1
gnu: r-inline: Update to 0.3.18. 
* gnu/packages/cran.scm (r-inline): Update to 0.3.18.
 2021-05-20 10:58:15 +02:00
Ricardo Wurmus 86ac5ac921
gnu: r-distillery: Update to 1.2-1. 
* gnu/packages/cran.scm (r-distillery): Update to 1.2-1.
 2021-05-20 10:58:15 +02:00
Ricardo Wurmus 263f122e34
gnu: r-dendextend: Update to 1.15.1. 
* gnu/packages/cran.scm (r-dendextend): Update to 1.15.1.
 2021-05-20 10:58:15 +02:00
Ricardo Wurmus 581835a323
gnu: r-shape: Update to 1.4.6. 
* gnu/packages/cran.scm (r-shape): Update to 1.4.6.
 2021-05-20 10:58:14 +02:00
Ricardo Wurmus 90f206cf96
gnu: r-colorspace: Update to 2.0-1. 
* gnu/packages/cran.scm (r-colorspace): Update to 2.0-1.
 2021-05-20 10:58:14 +02:00
Ricardo Wurmus a2621406a1
gnu: r-bslib: Update to 0.2.5.1. 
* gnu/packages/cran.scm (r-bslib): Update to 0.2.5.1.
[propagated-inputs]: Remove r-digest.
 2021-05-20 10:58:14 +02:00
Ricardo Wurmus 2bfe0f5fed
gnu: r-sass: Update to 0.4.0. 
* gnu/packages/cran.scm (r-sass): Update to 0.4.0.
[propagated-inputs]: Remove r-digest.
 2021-05-20 10:58:14 +02:00
Ricardo Wurmus a819f9c497
gnu: r-htmltable: Update to 2.2.1. 
* gnu/packages/cran.scm (r-htmltable): Update to 2.2.1.
 2021-05-20 10:58:14 +02:00
Ricardo Wurmus 1a2b94668e
gnu: r-httpuv: Update to 1.6.1. 
* gnu/packages/cran.scm (r-httpuv): Update to 1.6.1.
 2021-05-20 10:58:14 +02:00
Ricardo Wurmus 2a32b69ed3
gnu: r-cachem: Update to 1.0.5. 
* gnu/packages/cran.scm (r-cachem): Update to 1.0.5.
 2021-05-20 10:58:14 +02:00
Ricardo Wurmus c88e05b2db
gnu: Add r-babelgene. 
* gnu/packages/cran.scm (r-babelgene): New variable.
 2021-05-20 10:58:14 +02:00
Roel Janssen aa7eeabe9a
gnu: Add r-naturalsort. 
* gnu/packages/cran.scm (r-naturalsort): New variable.
 2021-05-04 21:34:24 +02:00
Ricardo Wurmus 8ddbf984a2
gnu: r-future-apply: Set HOME directory variable. 
* gnu/packages/cran.scm (r-future-apply)[arguments]: Add phase "set-HOME".
 2021-05-04 09:47:36 +02:00
Ricardo Wurmus 43a2eaad02
gnu: r-mlr3misc: Update to 0.9.1. 
* gnu/packages/cran.scm (r-mlr3misc): Update to 0.9.1.
 2021-05-04 07:27:49 +02:00
Ricardo Wurmus 065f3eac48
gnu: r-phangorn: Update to 2.7.0. 
* gnu/packages/cran.scm (r-phangorn): Update to 2.7.0.
 2021-05-04 07:27:49 +02:00
Ricardo Wurmus 9788d909ca
gnu: r-tidymodels: Update to 0.1.3. 
* gnu/packages/cran.scm (r-tidymodels): Update to 0.1.3.
[propagated-inputs]: Remove r-magrittr; add r-conflicted and r-workflowsets.
 2021-05-04 07:27:49 +02:00
Ricardo Wurmus 039c652a94
gnu: r-tidytext: Update to 0.3.1. 
* gnu/packages/cran.scm (r-tidytext): Update to 0.3.1.
 2021-05-04 07:27:49 +02:00
Ricardo Wurmus 0a7a9fd6a1
gnu: r-workflowsets: Update to 0.0.2. 
* gnu/packages/cran.scm (r-workflowsets): Update to 0.0.2.
[propagated-inputs]: Add r-generics.
 2021-05-04 07:27:49 +02:00
Ricardo Wurmus d14100cfea
gnu: r-tune: Update to 0.1.5. 
* gnu/packages/cran.scm (r-tune): Update to 0.1.5.
 2021-05-04 07:27:49 +02:00
Ricardo Wurmus 62824117c0
gnu: r-exactranktests: Update to 0.8-32. 
* gnu/packages/cran.scm (r-exactranktests): Update to 0.8-32.
 2021-05-04 07:27:49 +02:00
Ricardo Wurmus 205a03eb2c
gnu: r-transphylo: Update to 1.4.5. 
* gnu/packages/cran.scm (r-transphylo): Update to 1.4.5.
 2021-05-04 07:27:49 +02:00
Ricardo Wurmus 7fb817783d
gnu: r-muhaz: Update to 1.2.6.4. 
* gnu/packages/cran.scm (r-muhaz): Update to 1.2.6.4.
 2021-05-04 07:27:49 +02:00
Ricardo Wurmus 278a60cd56
gnu: r-clusterr: Update to 1.2.3. 
* gnu/packages/cran.scm (r-clusterr): Update to 1.2.3.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus 81e94675ff
gnu: r-spatstat-core: Update to 2.1-2. 
* gnu/packages/cran.scm (r-spatstat-core): Update to 2.1-2.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus 09a0040397
gnu: r-spatstat-geom: Update to 2.1-0. 
* gnu/packages/cran.scm (r-spatstat-geom): Update to 2.1-0.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus c5abf83937
gnu: r-lightgbm: Update to 3.2.1. 
* gnu/packages/cran.scm (r-lightgbm): Update to 3.2.1.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus 7ac6dd6403
gnu: r-scatterpie: Update to 0.1.6. 
* gnu/packages/cran.scm (r-scatterpie): Update to 0.1.6.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus 73f7bcf280
gnu: r-bridgesampling: Update to 1.1-2. 
* gnu/packages/cran.scm (r-bridgesampling): Update to 1.1-2.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus d7cdf463e9
gnu: r-keyring: Update to 1.2.0. 
* gnu/packages/cran.scm (r-keyring): Update to 1.2.0.
[propagated-inputs]: Remove r-getpass; add r-askpass.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus df9774306a
gnu: r-rsconnect: Update to 0.8.17. 
* gnu/packages/cran.scm (r-rsconnect): Update to 0.8.17.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus 6d2b288e24
gnu: r-tam: Update to 3.6-45. 
* gnu/packages/cran.scm (r-tam): Update to 3.6-45.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus 2dc5918ef9
gnu: r-bdgraph: Update to 2.64. 
* gnu/packages/cran.scm (r-bdgraph): Update to 2.64.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus 094341c4bf
gnu: r-openmx: Update to 2.19.5. 
* gnu/packages/cran.scm (r-openmx): Update to 2.19.5.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus ecba34b7d1
gnu: r-rpf: Update to 1.0.7. 
* gnu/packages/cran.scm (r-rpf): Update to 1.0.7.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus ee70707e99
gnu: r-rsvg: Update to 2.1.2. 
* gnu/packages/cran.scm (r-rsvg): Update to 2.1.2.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus 5aa13eeb6d
gnu: r-qqman: Update to 0.1.8. 
* gnu/packages/cran.scm (r-qqman): Update to 0.1.8.
[native-inputs]: Add r-knitr.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus 570a872ad8
gnu: r-anthropometry: Update to 1.15. 
* gnu/packages/cran.scm (r-anthropometry): Update to 1.15.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus 9c6148d3e5
gnu: r-adagio: Update to 0.8.4. 
* gnu/packages/cran.scm (r-adagio): Update to 0.8.4.
[propagated-inputs]: Add r-lpsolve.
[native-inputs]: Remove gfortran.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus 12d5937160
gnu: r-qgam: Update to 1.3.3. 
* gnu/packages/cran.scm (r-qgam): Update to 1.3.3.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus eda03d2462
gnu: r-emojifont: Update to 0.5.5. 
* gnu/packages/cran.scm (r-emojifont): Update to 0.5.5.
[native-inputs]: Add r-knitr.
 2021-05-04 07:27:47 +02:00
Ricardo Wurmus deb085d8bc
gnu: r-parameters: Update to 0.13.0. 
* gnu/packages/cran.scm (r-parameters): Update to 0.13.0.
 2021-05-04 07:27:47 +02:00
Ricardo Wurmus d25069df0b
gnu: r-terra: Update to 1.2-5. 
* gnu/packages/cran.scm (r-terra): Update to 1.2-5.
 2021-05-04 07:27:47 +02:00
Ricardo Wurmus 8bf6516ff9
gnu: r-xgboost: Update to 1.4.1.1. 
* gnu/packages/cran.scm (r-xgboost): Update to 1.4.1.1.
[propagated-inputs]: Add r-jsonlite.
 2021-05-04 07:27:47 +02:00
Ricardo Wurmus e0121c91fd
gnu: r-ingredients: Update to 2.2.0. 
* gnu/packages/cran.scm (r-ingredients): Update to 2.2.0.
 2021-05-04 07:27:47 +02:00
Ricardo Wurmus 4cfd543cc1
gnu: r-dqrng: Update to 0.3.0. 
* gnu/packages/cran.scm (r-dqrng): Update to 0.3.0.
[native-inputs]: Add r-knitr.
 2021-05-04 07:27:47 +02:00
Ricardo Wurmus aca781b9a4
gnu: r-clue: Update to 0.3-59. 
* gnu/packages/cran.scm (r-clue): Update to 0.3-59.
 2021-05-04 07:27:47 +02:00
Ricardo Wurmus abc63422de
gnu: r-ggplotify: Update to 0.0.6. 
* gnu/packages/cran.scm (r-ggplotify): Update to 0.0.6.
 2021-05-04 07:27:47 +02:00
Ricardo Wurmus da1f80f1e1
gnu: r-svmisc: Update to 1.1.4. 
* gnu/packages/cran.scm (r-svmisc): Update to 1.1.4.
[native-inputs]: Add r-knitr.
 2021-05-04 07:27:47 +02:00