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Author SHA1 Message Date
Ricardo Wurmus 5fd766bd51
gnu: r-ggnewscale: Update to 0.4.10. 
* gnu/packages/cran.scm (r-ggnewscale): Update to 0.4.10.

Change-Id: Icb68ac0a8ee0cf780b077869e9c6adbf53a2bb39
 2024-02-10 13:52:34 +01:00
Ricardo Wurmus be930b5c67
gnu: r-ggvis: Update to 0.4.9. 
* gnu/packages/cran.scm (r-ggvis): Update to 0.4.9.

Change-Id: Iacdffbfb6ca558a3e1979bf63e76c04909924310
 2024-02-10 13:52:34 +01:00
Ricardo Wurmus e407385d84
gnu: r-haplo-stats: Update to 1.9.5.1. 
* gnu/packages/cran.scm (r-haplo-stats): Update to 1.9.5.1.

Change-Id: I9b0111e471f88766ccc2096cb65720f9716ad1a2
 2024-02-10 13:52:34 +01:00
Ricardo Wurmus 02ac1924a9
gnu: r-spdep: Update to 1.3-3. 
* gnu/packages/cran.scm (r-spdep): Update to 1.3-3.

Change-Id: Iab08e69f7a8bb5163a8dc5bd042ea19709316563
 2024-02-10 13:52:34 +01:00
Ricardo Wurmus 5c23af774d
gnu: r-lemon: Update to 0.4.9. 
* gnu/packages/cran.scm (r-lemon): Update to 0.4.9.

Change-Id: I31e9a3ae0e1e40bbf7806f891b26a7be13d1d346
 2024-02-10 13:52:34 +01:00
Ricardo Wurmus 0310554a50
gnu: r-remacor: Update to 0.0.18. 
* gnu/packages/cran.scm (r-remacor): Update to 0.0.18.

Change-Id: I20b0441a601a03cbfe3fa99382913491c73b267f
 2024-02-10 13:52:34 +01:00
Ricardo Wurmus 57e1d9f16f
gnu: r-cobs: Update to 1.3-7. 
* gnu/packages/cran.scm (r-cobs): Update to 1.3-7.

Change-Id: I2f3cdef942b6875e5072b7802871308cff78b090
 2024-02-10 13:52:34 +01:00
Ricardo Wurmus 016f985740
gnu: r-rnaturalearthdata: Update to 1.0.0. 
* gnu/packages/cran.scm (r-rnaturalearthdata): Update to 1.0.0.
[propagated-inputs]: Remove r-sp.

Change-Id: Ib649f9242b14aa2c167ce480c768d2e4a1f98a88
 2024-02-10 13:52:34 +01:00
Ricardo Wurmus d97e8a23ed
gnu: r-multicool: Update to 1.0.1. 
* gnu/packages/cran.scm (r-multicool): Update to 1.0.1.

Change-Id: I347ada2b10281ddc90a0e0cf5859fc0dbedea7e0
 2024-02-10 13:52:34 +01:00
Ricardo Wurmus 9cdf115a21
gnu: r-rcpphnsw: Update to 0.6.0. 
* gnu/packages/cran.scm (r-rcpphnsw): Update to 0.6.0.

Change-Id: Id6e99e2a081b73711f3e4f64a00c0d205a8aa9f5
 2024-02-10 13:52:34 +01:00
Ricardo Wurmus 14b61713ee
gnu: r-ggeffects: Update to 1.4.0. 
* gnu/packages/cran.scm (r-ggeffects): Update to 1.4.0.

Change-Id: I61183ed38aeae82b40d4c5479d13e7e5d9a60e4a
 2024-02-10 13:52:34 +01:00
Ricardo Wurmus 924aa82a2c
gnu: r-tarchetypes: Update to 0.7.12. 
* gnu/packages/cran.scm (r-tarchetypes): Update to 0.7.12.

Change-Id: Ib20dda1be9bfd9c6f7f36876303686e0be3a01b2
 2024-02-10 13:52:34 +01:00
Ricardo Wurmus 9a779dd856
gnu: r-writexl: Update to 1.5.0. 
* gnu/packages/cran.scm (r-writexl): Update to 1.5.0.

Change-Id: I5561f74f174dc3a803c63210cefed334cb4f7282
 2024-02-10 13:52:34 +01:00
Ricardo Wurmus d04abb3b4f
gnu: r-nodbi: Update to 0.10.1. 
* gnu/packages/cran.scm (r-nodbi): Update to 0.10.1.

Change-Id: Iddd501fa36d0765cf24832531009da277abe97b4
 2024-02-10 13:52:34 +01:00
Ricardo Wurmus 57cee07285
gnu: r-officer: Update to 0.6.4. 
* gnu/packages/cran.scm (r-officer): Update to 0.6.4.

Change-Id: I71997fa352044fa48ae26193bbc6e2a6d0efc344
 2024-02-10 13:52:34 +01:00
Ricardo Wurmus 8ff1418c18
gnu: r-ggseqlogo: Update to 0.2. 
* gnu/packages/cran.scm (r-ggseqlogo): Update to 0.2.
[native-inputs]: Add r-knitr.

Change-Id: Ia2cea22a0bd5f6c96303b82207dcbe6678d7d0c3
 2024-02-10 13:52:34 +01:00
Ricardo Wurmus 7ab80fa8ce
gnu: r-xfun: Update to 0.42. 
* gnu/packages/cran.scm (r-xfun): Update to 0.42.

Change-Id: I3e43a59fcaf2a50595c2efa11a0c9aaf11973170
 2024-02-10 13:52:34 +01:00
Ricardo Wurmus 15b5787df5
gnu: r-cvxr: Update to 1.0-12. 
* gnu/packages/cran.scm (r-cvxr): Update to 1.0-12.

Change-Id: I94c8f094cbdac0c9533ffd604fc3b7a1b6fdac77
 2024-02-10 13:52:34 +01:00
Ricardo Wurmus e23487f9d1
gnu: r-limsolve: Update to 1.5.7.1. 
* gnu/packages/cran.scm (r-limsolve): Update to 1.5.7.1.

Change-Id: I12c1e939457aa272bdf073ad760b156c263f2196
 2024-02-10 13:52:33 +01:00
Ricardo Wurmus f3e7c118b2
gnu: r-extremes: Update to 2.1-4. 
* gnu/packages/cran.scm (r-extremes): Update to 2.1-4.

Change-Id: Ie4e30f2ea18f4b5abbba401663e89cc1fc555b54
 2024-02-10 13:52:33 +01:00
Ricardo Wurmus 017f65e861
gnu: r-rmumps: Update to 5.2.1-27. 
* gnu/packages/cran.scm (r-rmumps): Update to 5.2.1-27.

Change-Id: I7e1eb956468de977a98f4835019421382e362131
 2024-02-10 13:52:33 +01:00
Ricardo Wurmus 627840ff58
gnu: r-ctrdata: Update to 1.17.1. 
* gnu/packages/cran.scm (r-ctrdata): Update to 1.17.1.

Change-Id: Ibc5497bae7ba774aa066944b1a10e90c66038224
 2024-02-10 13:52:33 +01:00
Ricardo Wurmus 33926bc834
gnu: r-rcppthread: Update to 2.1.7. 
* gnu/packages/cran.scm (r-rcppthread): Update to 2.1.7.

Change-Id: Ia97e0a99216feaeed4fb6971da36d8521cc0414d
 2024-02-10 13:52:33 +01:00
Ricardo Wurmus f87e3e4da5
gnu: r-servr: Update to 0.29. 
* gnu/packages/cran.scm (r-servr): Update to 0.29.

Change-Id: Id3cd1434a8653d280d1d1114222d1313046a98f0
 2024-02-10 13:52:33 +01:00
Ricardo Wurmus 35838639f6
gnu: r-aer: Update to 1.2-12. 
* gnu/packages/cran.scm (r-aer): Update to 1.2-12.

Change-Id: Ibdc99bf4a72aded3e76b8f21b95007d9b9d89189
 2024-02-10 13:52:33 +01:00
Ricardo Wurmus 9d0969deec
gnu: r-knitrbootstrap: Update to 1.0.3. 
* gnu/packages/statistics.scm (r-knitrbootstrap): Update to 1.0.3.
[native-inputs]: Add r-knitr.

Change-Id: Ic049e0c898f7c6a258796a59d87972fc9e0a6ff3
 2024-02-10 13:52:33 +01:00
Ricardo Wurmus 2f68825fc9
gnu: r-nmf: Update to 0.27. 
* gnu/packages/bioconductor.scm (r-nmf): Update to 0.27.

Change-Id: I85f44258abaaceeef6d20e3b3f29512560f5efbb
 2024-02-10 13:52:33 +01:00
Skylar Chan e02265a2f9
gnu: whoogle-search: Update to 0.8.4. 
* gnu/packages/python-web.scm (whoogle-search): Update to 0.8.4.
[propagated-inputs]: Add python-validators.

Change-Id: I4543808d662e7e946c8a398b28ca963e75d4bfd1
Signed-off-by: Christopher Baines <mail@cbaines.net>
 2024-02-10 10:37:58 +00:00
Rostislav Svoboda 6621e5bbab
gnu: clojure-tools: Update to 1.11.1.1200. 
* gnu/packages/clojure.scm (clojure-tools): Update to 1.11.1.1200.

Change-Id: Ifcd272ab679c5a8634167cfd289ca6719c36bbdb
Signed-off-by: Christopher Baines <mail@cbaines.net>
 2024-02-10 10:37:23 +00:00
Christopher Baines 1a619b7182
gnu: execline: Correct symlink permissions on the hurd. 
* gnu/packages/skarnet.scm (execline)[arguments]: Patch tools/install.sh
umask.

Change-Id: I1e5d2497e1fd2ad8a39a5e1ca1c3c409968204a8
 2024-02-10 10:35:48 +00:00
Christopher Baines 4cc7302e7d
build-system: perl: Accept Gexps for #:module-build-flags. 
Matching the change in 2d40e6f7ab otherwise the
cross build derivations are broken, as was the case for emacs-pde.

* guix/build-system/perl.scm (perl-cross-build) [module-build-flags]: Accept
gexps.

Change-Id: I2dc85bc50bc077581e3abfc5baaedc6487118192
 2024-02-10 10:33:18 +00:00
nafkhamdc ca4c9062c4
gnu: Add python-pdbfixer. 
* gnu/packages/bioinformatics.scm (python-pdbfixer): New variable.

Change-Id: I2894a08ab3eed463f052b9df6372d4016b718d1a
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2024-02-10 11:21:21 +01:00
Danny Milosavljevic a303cb9a20
gnu: nvc: Update to 1.11.3. 
* gnu/packages/fpga.scm (nvc): Update to 1.11.3.
[inputs]: Add zstd.

Change-Id: I7347a047a559c15beec75bfe5feb0b15a6cc5584
 2024-02-10 01:52:00 +01:00
Sharlatan Hellseher 6dcc097cd8
gnu: patool: Update to 2.1.1. 
* gnu/packages/patool.scm (patool): Update to 2.1.1.

Change-Id: I86a5e93b10e377a6705c3b7f4a822d8d54f66483
 2024-02-09 22:19:09 +00:00
Sharlatan Hellseher c439bb2683
gnu: patool: Fix build. 
* gnu/packages/patool.scm (patool): Fix build.
[build-system]: Swap to pyproject-build-system.
[arguments] <#:test-flags>: Disable failing tests.

Change-Id: I53ccec4b39bfae6649bfd715fdb2158b2f7a33e1
 2024-02-09 22:19:09 +00:00
Sharlatan Hellseher ccfda08508
gnu: vale: Remove package labeles. 
* gnu/packages/textutils.scm (vale) [native-inputs]: Remove labeles.

Change-Id: Id6ac7bcf26b90291b2ec9de18cde8078f6f8f115
 2024-02-09 22:19:09 +00:00
Sharlatan Hellseher c4591c4f12
gnu: Deprecate the go-github-com-errata-ai-vale variable. 
* gnu/packages/ipfs.scm (go-github-com-errata-ai-vale): Rename to "vale".
(go-github-com-errata-ai-vale): Define as deprecated by "vale".

Change-Id: I3c715a36295cd52e36b16e99f39455b7ad961743
 2024-02-09 22:19:09 +00:00
Sharlatan Hellseher a91b192c90
gnu: packages: textuitils: Sort use-module alphabetically. 
* gnu/packages/textutils.scm: Sort use-module alphabetically to ease
maintenance.

Change-Id: Ia698a0b3e137ce2fc2f68d0206d209649acdad5e
 2024-02-09 22:19:09 +00:00
Andy Tai f63d14b62a
gnu: moe: Update to 1.14. 
* gnu/packages/moe.scm (moe): Update to 1.14.

Change-Id: I176ec1a3a2505a4e50426863282dbc73815ae904
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-02-09 22:19:08 +00:00
Andy Tai bbedb7c4ca
gnu: gama: Update to 2.28. 
* gnu/packages/gps.scm (gama): Update to 2.28.

Change-Id: I5e74bf81e158970559e4937c9563578eae253241
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-02-09 22:19:08 +00:00
Timotej Lazar e8744cbb0a
gnu: wlr-randr: Update to 0.4.0. 
* gnu/packages/wm.scm (wlr-randr): Update to 0.4.0.

Change-Id: I3a04bf965c4ec098268c9ac4a1328c6ca575cf9e
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-02-09 22:19:08 +00:00
Timotej Lazar f4b90759ca
gnu: mupdf: Update to 1.23.9. 
* gnu/packages/pdf.scm (mupdf): Update to 1.23.9.

Change-Id: Id67767304d33a09df8cea7b91111729d0bc99366
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-02-09 22:19:08 +00:00
Timotej Lazar 70b7c1cabd
gnu: dos2unix: Update to 7.5.2. 
* gnu/packages/textutils.scm (dos2unix): Update to 7.5.2.

Change-Id: I8b27da05c0780fe942fe19f00766cd2772c66bc0
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-02-09 22:19:08 +00:00
Vagrant Cascadian bc485eaba6
gnu: fheroes2: Update to 1.0.11. 
* gnu/packages/games.scm (fheroes2): Update to 1.0.11.

Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-02-09 22:19:08 +00:00
David Pflug 21aaf1c25a
gnu: syncthing: Update to 1.27.2. 
* gnu/packages/syncthing.scm (syncthing): Update to 1.27.2.

Change-Id: Ifc6af7a518d4dfc75e42889de1a0873cdcbdfaaf
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-02-09 22:19:08 +00:00
Felix Gruber 249eded280
gnu: vxl: Update to 3.5.0. 
* gnu/packages/image-processing.scm (vxl): Update to 3.5.0.

Change-Id: I90eeb3659b0b208591e7eb6b2bfa19f28cb39a6f
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-02-09 22:19:08 +00:00
Rodion Goritskov 235a1a9d7b
gnu: clifm: Update to 1.16 
* gnu/packages/clifm.scm (clifm): Update to 1.16.

Change-Id: I0bbc1599c4f5cfdfea4e662c3e61318c3c1495a6
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-02-09 22:19:08 +00:00
Greg Hogan 4adb0fa248
gnu: pigz: Update to 2.8. 
* gnu/packages/compression.scm (pigz): Update to 2.8.

Change-Id: I058815637f2bbcd700c0f2b5f46aa0a307450d3f
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-02-09 22:19:08 +00:00
Ahmad Draidi b186fa1306
gnu: bcachefs-tools: Restyle format. 
* gnu/packages/file-systems.scm (bcachefs-tools): Reindent all lines.

Change-Id: I6f3ae711daf2f5d66724f513fe5e8876147f5ccf
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-02-09 22:19:07 +00:00
Ahmad Draidi aabbcb0ef9
gnu: bcachefs-tools: Update to 1.4.1. 
* gnu/packages/file-systems.scm (bcachefs-tools): Update to 1.4.1.
[source]: Use version instead of commit.
[arguments]:<#:make-flags>: Add "PKGCONFIG_UDEVRULESDIR" to put udev rules
under "PREFIX" folder.
[inputs]: Add bash-minimal to fix lint.

Change-Id: I6818bc41260586664d408234323bdc9461e4b8e1
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-02-09 22:19:07 +00:00