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Author SHA1 Message Date
Ludovic Courtès f518882725
tests: Add missing module imports for marionette-evaluated code. 
This missing imports became apparent with commit
a09c7da8f8, which runs the marionette
service in a fresh Guile process with fewer imports.

* gnu/tests/databases.scm (run-postgresql-test, run-timescaledb-test)
(run-mysql-test): Add missing module imports for code passed to
'marionette-eval'.
* gnu/tests/docker.scm (run-docker-test, run-docker-system-test): Likewise.
* gnu/tests/mail.scm (run-dovecot-test, run-getmail-test): Likewise.
* gnu/tests/monitoring.scm (run-zabbix-server-test): Likewise.
* gnu/tests/pam.scm (run-test-pam-limits): Likewise.
* gnu/tests/reconfigure.scm (run-switch-to-system-test)
(run-install-bootloader-test): Likewise.
* gnu/tests/security-token.scm (run-pcscd-test): Likewise.
* gnu/tests/install.scm (gui-test-program): Likewise.
* gnu/tests/telephony.scm (run-jami-test): Add modules to
the #:imported-modules argument of 'marionette-operating-system'.
[test]: Remove them from 'with-imported-modules'; remove
'with-extensions'.  Add "d-bus tooling loaded" test to set up %load-path
and %load-compiled-path so the marionette process can find
guile-ac-d-bus and guile-packrat.
 2023-05-06 17:12:45 +02:00
Christopher Baines 1cb0dee3a3
gnu: guile-irc: Fix build. 
* gnu/packages/guile-xyz.scm (guile-irc)[arguments]: Add 'fix-autogen.sh phase
to patch shebang removing leading space.
[inputs]: Add guile-gnutls.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2023-05-06 14:30:47 +01:00
Ricardo Wurmus 8294d5a641
gnu: ibus-libpinyin: Update to 1.15.2. 
* gnu/packages/ibus.scm (ibus-libpinyin): Update to 1.15.2.
 2023-05-06 14:39:04 +02:00
Ricardo Wurmus 7469c53b17
gnu: libpinyin: Update to 2.8.1. 
* gnu/packages/ibus.scm (libpinyin): Update to 2.8.1.
 2023-05-06 14:39:04 +02:00
Ricardo Wurmus 6dd13506dc
gnu: ibus-libpinyin: Wrap setup tool in full GI_TYPELIB_PATH. 
* gnu/packages/ibus.scm (ibus-libpinyin)[arguments]: Include GTK+ and its
dependencies in the effective GI_TYPELIB_PATH of the setup executable.
 2023-05-06 14:39:04 +02:00
Ricardo Wurmus 33d626da7d
gnu: ibus-libpinyin: Drop package labels and use G-exps. 
* gnu/packages/ibus.scm (ibus-libpinyin)[arguments]: Use G-expression.
[inputs]: Drop labels.
 2023-05-06 14:39:04 +02:00
Hilton Chain 40d6615ca2
gnu: libnode: Use node-lts as base. 
* gnu/packages/node.scm (libnode): Use node-lts as base.
* gnu/packages/cran.scm (r-v8)[arguments]<#:phases>: Adjusted accordingly.

Signed-off-by: Jelle Licht <jlicht@fsfe.org>
 2023-05-06 13:53:22 +02:00
Hilton Chain 8cc0ed4536
gnu: node-lts: Update to 18.16.0. 
* gnu/packages/node.scm (node-lts): Update to 18.16.0.
[snippet]: Keep file deps/openssl/nodejs-openssl.cnf.
[arguments]<#:configure-flags>: Enable v8 snapshot compression.
<#:phases>: Adjust problematic tests to delete accordingly.
Patch additional file with hardcoded references to /bin/sh.
[native-inputs,inputs]: Replace openssl-1.1 with openssl.
Replace libuv-for-node with libuv.
Replace nghttp2-for-node with nghttp2.

Signed-off-by: Jelle Licht <jlicht@fsfe.org>
Co-authored-by: Jelle Licht <jlicht@fsfe.org>
 2023-05-06 13:53:22 +02:00
Hilton Chain bd3f19c874
gnu: llhttp-bootstrap: Update to 6.0.10. 
* gnu/packages/node.scm (llhttp-bootstrap): Update to 6.0.10.
* gnu/packages/patches/llhttp-bootstrap-CVE-2020-8287.patch: Remove file.
* gnu/local.mk: Remove it.

Signed-off-by: Jelle Licht <jlicht@fsfe.org>
 2023-05-06 13:53:22 +02:00
Jelle Licht 6668e3a9ad
gnu: emacs-nodejs-repl: Build with node-lts. 
* gnu/packages/emacs-xyz.scm (emacs-nodejs-repl)[inputs]: Replace node by
node-lts.
 2023-05-06 13:53:22 +02:00
Jelle Licht f963ac4f63
gnu: node-openzwave-shared: Fix compilation for new versions of node 
* gnu/packages/zwave.scm (node-openzwave-shared)[arguments]<#:phases>: Add
patch-compiler phase to allow compilation with node versions 16 and up.
 2023-05-06 13:53:22 +02:00
Jelle Licht 2c8c582803
gnu: node-serialport: Avoid gyp rebuilds. 
* gnu/packages/node-xyz.scm (node-serialport)[arguments]<phases>: Explicitly
disable gyp recompilation.
 2023-05-06 13:53:22 +02:00
Jelle Licht 8b4c901ac8
gnu: node-uglify-js: Update to 3.14.2. 
* gnu/packages/uglifyjs.scm (node-uglify-js): Update to 3.14.2.
 2023-05-06 13:53:22 +02:00
Jelle Licht cfa2432ae2
gnu: node-yazl: Ignore development dependencies. 
* gnu/packages/node-xyz.scm (node-yazl)[arguments]<phases>: Explicitly patch
out development dependencies. Re-enable configure phase.
 2023-05-06 13:53:22 +02:00
Jelle Licht 8890e9e998
gnu: node-ieee754: Ignore development dependencies. 
* gnu/packages/node-xyz.scm (node-ieee754)[arguments]<phases>: Explicitly
patch out development dependencies. Re-enable configure phase.
 2023-05-06 13:53:22 +02:00
Jelle Licht 5133b8bfaa
gnu: node-resolve-protobuf-schema: Ignore development dependencies. 
* gnu/packages/node-xyz.scm (node-resolve-protobuf-schema)[arguments]<phases>:
Explicitly patch out development dependencies. Re-enable configure phase.
 2023-05-06 13:53:22 +02:00
Jelle Licht 0140e014aa
gnu: node-protocol-buffers-schema: Ignore development dependencies. 
* gnu/packages/node-xyz.scm (node-protocol-buffers-schema)[arguments]<phases>:
Explicitly patch out development dependencies. Re-enable configure phase.
 2023-05-06 13:53:21 +02:00
Jelle Licht 25a117bcd8
gnu: node-pbf: Ignore development dependencies. 
* gnu/packages/node-xyz.scm (node-pbf)[arguments]<phases>: Explicitly patch
out development dependencies. Re-enable configure phase.
 2023-05-06 13:53:21 +02:00
Jelle Licht 4c26ea1257
gnu: node-minimist: Ignore development dependencies. 
* gnu/packages/node-xyz.scm (node-minimist)[arguments]<phases>: Explicitly
patch out development dependencies. Re-enable configure phase.
 2023-05-06 13:53:21 +02:00
Jelle Licht 06be5228f0
gnu: node-crx3: Ignore development dependencies. 
* gnu/packages/node-xyz.scm (node-crx3)[arguments]<phases>: Explicitly patch
out development dependencies. Re-enable configure phase.
 2023-05-06 13:53:21 +02:00
Jelle Licht aa0dbc3170
gnu: node-buffer-crc32: Ignore development dependencies. 
* gnu/packages/node-xyz.scm (node-acorn)[arguments]<phases>: Explicitly patch
out development dependencies.  Re-enable configure phase.
 2023-05-06 13:53:21 +02:00
Jelle Licht 14821580f5
gnu: node-acorn: Fix broken transpilation. 
* gnu/packages/node-xyz.scm (node-acorn)[native-inputs]: Add `esbuild'.
[arguments]<phases>: Replace build phase by custom `esbuild' invocations.
 2023-05-06 13:53:21 +02:00
Jelle Licht 7a44c34f4a
gnu: node-acorn: Remove lifecycle script. 
* gnu/packages/node-xyz.scm (node-acorn)[arguments]<modules>: New argument.
<phases>: Patch out unused 'prepare' script that breaks dependents.
 2023-05-06 13:53:21 +02:00
Jelle Licht 00b2e16823
gnu: node-acorn: Disable tests. 
* gnu/packages/node-xyz.scm (node-acorn): Explicitly disable tests.
 2023-05-06 13:53:21 +02:00
Jelle Licht d8ce5e3297
build-system: node: Use `--install-links' with `npm install'. 
Later versions of npm need to explicitly install a copy of local dependencies,
instead of only a symlink.

* guix/build/node-build-system.scm (configure): Add `--install-links' to npm
install invocation.
(install): Ditto.
 2023-05-06 13:53:21 +02:00
Christopher Baines c229937c6a
services: guix-build-coordinator: Simpify service startup. 
Take advantage of changes in the build coordinator to reduce the complexity of
the service startup script.

* gnu/services/guix.scm (make-guix-build-coordinator-start-script): Remove the
metrics registry and datastore.
 2023-05-06 12:51:51 +01:00
Christopher Baines 7b1b43a27a
gnu: guix-build-coordinator: Update to 0-80.d030cac. 
* gnu/packages/package-management.scm (guix-build-coordinator): Update to
0-80.d030cac.
 2023-05-06 12:51:51 +01:00
Christopher Baines 99bcf7ce98
gnu: guix-data-service: Update to 0.0.1-40.3734a85 
* gnu/packages/web.scm (guix-data-service): Update to 0.0.1-40.3734a85.
 2023-05-06 12:51:51 +01:00
宋文武 7368020bef
gnu: rizin: Fix build. 
* gnu/packages/engineering.scm (rizin)[arguments]: Skip failing tests.
 2023-05-06 18:49:13 +08:00
Timotej Lazar 64086a4fa4
gnu: mupdf: Simplify snippet. 
* gnu/packages/pdf.scm (mupdf)[source]: Simplify code to remove unused
thirdparty libs.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-05-06 00:01:56 +02:00
Timotej Lazar c106baed62
gnu: mupdf: Update to 1.22.0. 
* gnu/packages/pdf.scm (mupdf): Update to 1.22.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-05-06 00:01:50 +02:00
Sergey Trofimov 71a438dcba
gnu: git-crypt: Fix build issues on OpenSSL 3. 
* gnu/packages/version-control.scm (git-crypt)[arguments]: In 'build'
phase, set 'CXXFLAGS'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-05-05 23:59:52 +02:00
Olivier Dion ecb2710353
gnu: lttng-tools: Fix build failure. 
* gnu/packages/instrumentation.scm (lttng-tools)
[native-inputs]: Add autoconf, automake, libtool.
[arguments]: Add 'autoreconf build phase before 'configure.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-05-05 23:56:04 +02:00
Andrew Whatson 61775aad6f
gnu: bear: Build against 'abseil-cpp-cxxstd11'. 
Fixes a linker error when building bear, caused by incompatibility
between abseil-cpp used by bear and abseil-cpp-cxxstd11 used by grpc.

* gnu/packages/build-tools.scm (bear)[native-inputs]: Use
ABSEIL-CPP-CXXSTD11.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-05-05 23:50:32 +02:00
Ludovic Courtès 69a65335f9
gnu: guile2.0-shepherd: Remove. 
Version 0.9.x of the Shepherd requires Guile >= 2.2.

* gnu/packages/admin.scm (guile2.0-shepherd): Remove.
 2023-05-05 23:47:49 +02:00
Ludovic Courtès 75a25d9c2a
read-print: Recognize 'wrap-program' and 'wrap-script' as special forms. 
* guix/read-print.scm (%special-forms): Add 'wrap-program' and
'wrap-script'.
 2023-05-05 23:47:48 +02:00
Ludovic Courtès 8749f31485
read-print: Correctly read "(. x)". 
* guix/read-print.scm (read-with-comments): Check whether REST is a pair
before calling 'set-cdr!'.
* tests/read-print.scm ("read-with-comments: half dot notation"): New test.
 2023-05-05 23:47:48 +02:00
Ricardo Wurmus 94d0efffb3
Revert "gnu: Add python-gimmemotifs." 
This reverts commit dc8b3ebe5d.

python-gimmemotifs is not usable without proprietary third-party tools.
 2023-05-05 22:34:30 +02:00
Christopher Baines 6922069bcb
gnu: gcc-11: Fix patch-hurd-libpthread phase. 
It didn't work when it was introduced in
08acdd0765.

* gnu/packages/gcc.scm (gcc-11)[arguments]: Remove the procedure arguments,
and use %build-inputs rather than inputs.
* gnu/packages/commencement.scm (gcc-boot0)[native-inputs]: Add hurd-patch, as
this package inherits from gcc-11.
 2023-05-05 14:57:29 +01:00
Ricardo Wurmus dc8b3ebe5d
gnu: Add python-gimmemotifs. 
* gnu/packages/bioinformatics.scm (python-gimmemotifs): New variable.
 2023-05-05 15:39:29 +02:00
Ricardo Wurmus adbd97cbb0
gnu: Add python-norns. 
* gnu/packages/python-xyz.scm (python-norns): New variable.
 2023-05-05 15:39:29 +02:00
Ricardo Wurmus fcd397e4a6
gnu: Add python-xdg. 
* gnu/packages/python-xyz.scm (python-xdg): New variable.
 2023-05-05 15:39:29 +02:00
Ricardo Wurmus 25623a3b34
gnu: Add python-qnorm. 
* gnu/packages/python-xyz.scm (python-qnorm): New variable.
 2023-05-05 15:39:29 +02:00
Ricardo Wurmus 931650212a
gnu: Add python-biofluff. 
* gnu/packages/bioinformatics.scm (python-biofluff): New variable.
 2023-05-05 15:39:29 +02:00
Ricardo Wurmus 0b5088a2a3
gnu: Add python-genomepy. 
* gnu/packages/bioinformatics.scm (python-genomepy): New variable.
 2023-05-05 15:39:29 +02:00
Ricardo Wurmus 5eac2bbb71
gnu: Add python-filelock-3.5. 
* gnu/packages/python-xyz.scm (python-filelock-3.5): New variable.
 2023-05-05 15:39:29 +02:00
Ricardo Wurmus 181714e5f8
gnu: Add python-logomaker. 
* gnu/packages/bioinformatics.scm (python-logomaker): New variable.
 2023-05-05 15:39:29 +02:00
Ricardo Wurmus f41c9409f2
gnu: Add python-mysql-connector-python. 
* gnu/packages/python-xyz.scm (python-mysql-connector-python): New variable.
 2023-05-05 15:39:28 +02:00
Ricardo Wurmus 484b843c2e
gnu: Add protobuf-3.20. 
* gnu/packages/protobuf.scm (protobuf-3.20): New variable.
 2023-05-05 15:39:28 +02:00
Ricardo Wurmus 99627b86c8
gnu: Add python-palettable. 
* gnu/packages/python-xyz.scm (python-palettable): New variable.
 2023-05-05 15:39:28 +02:00