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Author SHA1 Message Date
Maxim Cournoyer 6661e83a23
gnu: Add rust-arbitrary-1. 
* gnu/packages/crates-io.scm (rust-arbitrary-1): New variable.
(rust-arbitrary-0.4): Inherit from rust-arbitrary-1.
 2021-06-06 02:38:23 -04:00
Maxim Cournoyer e6c5d08479
gnu: Add rust-derive-arbitrary-1. 
* gnu/packages/crates-io.scm (rust-derive-arbitrary-1): New variable.
(rust-derive-arbitrary-0.4): Inherit from the above.
 2021-06-06 02:38:23 -04:00
Maxim Cournoyer 41e6f47071
gnu: Add rust-opener-0.4. 
* gnu/packages/crates-io.scm (rust-opener-0.4): New variable.
 2021-06-06 02:38:23 -04:00
Maxim Cournoyer 1c47e771a5
gnu: Add rust-rustc-workspace-hack-1. 
* gnu/packages/crates-io.scm (rust-rustc-workspace-hack-1): New variable.
 2021-06-06 02:38:23 -04:00
Maxim Cournoyer 7ea0a2ec97
gnu: Add rust-serde-ignored-0.1. 
* gnu/packages/crates-io.scm (rust-serde-ignored-0.1): New variable.
 2021-06-06 02:38:22 -04:00
Maxim Cournoyer be59ed491a
gnu: Add rust-rustfix-0.5. 
* gnu/packages/crates-io.scm (rust-rustfix-0.5): New variable.
(rust-rustfix-0.4): Inherit from the above.
 2021-06-06 02:38:22 -04:00
Maxim Cournoyer 3a9923d4b8
gnu: rust-v-frame-0.2: Update to 0.2.1. 
* gnu/packages/crates-io.scm (rust-v-frame-0.2): Update to 0.2.1.
[synopsis]: Fix capitalization lint warning.
[description]: Re-indent.
 2021-06-06 02:38:22 -04:00
Mădălin Ionel Patrașcu d1e7b50dbf
gnu: python-cooler: Update to 0.8.11. 
* gnu/packages/bioinformatics.scm (python-cooler): Update to 0.8.11.
[arguments]: Add build phase "patch-tests"; replace "check" phase.
[native-inputs]: Add python-codecov, python-pytest-cov, and
python-pytest-flake8.
[propagated-inputs]: Add python-six and python-sparse.
 2021-06-06 08:33:21 +02:00
Mădălin Ionel Patrașcu 78469645fd
gnu: Add python-sparse. 
* gnu/packages/python-xyz.scm(python-sparse): New variable.
 2021-06-06 08:33:21 +02:00
Maxim Cournoyer 63858f8c8b
gnu: gnutls: Update to 3.7.2. 
The 3.7 branch, while not considered the "stable" branch upstream, has been
adopted by most major GNU/Linux distributions such as Debian, Arch, openSUSE,
etc.  It has the benefit of receiving all the security fixes.

* gnu/packages/tls.scm (gnutls): Update to 3.7.2.  Remove trailing #t.
[source]: Remove the gnutls-CVE-2021-20231.patch and
gnutls-CVE-2021-20232.patch patches, now incorporated in the source.
* gnu/packages/patches/gnutls-CVE-2021-20231.patch: Delete file.
* gnu/packages/patches/gnutls-CVE-2021-20232.patch: Likewise.
* gnu/local.mk (dist_patch_DATA): De-register them.
 2021-06-06 00:50:16 -04:00
Guillaume Le Vaillant 9caf7112ee
gnu: gr-osmosdr: Add SoapySDR support. 
* gnu/packages/radio.scm (gr-osmosdr)[inputs]: Add soapysdr.
 2021-06-06 00:25:49 +02:00
Guillaume Le Vaillant 60cd50af43
gnu: rtl-433: Add SoapySDR support. 
* gnu/packages/radio.scm (rtl-433)[inputs]: Add soapysdr.
 2021-06-06 00:25:49 +02:00
Guillaume Le Vaillant 7a5d3976a2
gnu: welle-io: Add SoapySDR support. 
* gnu/packages/radio.scm (welle-io)[inputs]: Add soapysdr.
  [arguments]: Update 'configure-flags'.
 2021-06-06 00:25:49 +02:00
Guillaume Le Vaillant 0855fd3de5
gnu: Add soapyairspyhf. 
* gnu/packages/radio.scm (soapyairspyhf): New variable.
 2021-06-06 00:25:49 +02:00
Guillaume Le Vaillant ee586c9437
gnu: Add soapyrtlsdr. 
* gnu/packages/radio.scm (soapyrtlsdr): New variable.
 2021-06-06 00:25:49 +02:00
Guillaume Le Vaillant 59ce827618
gnu: Add soapyhackrf. 
* gnu/packages/radio.scm (soapyhackrf): New variable.
 2021-06-06 00:25:49 +02:00
Guillaume Le Vaillant 524c64152a
gnu: Add soapysdr. 
* gnu/packages/radio.scm (soapysdr): New variable.
 2021-06-06 00:25:49 +02:00
Marius Bakke f72a1253a1
gnu: hypre: Update to 2020.0. 
* gnu/packages/maths.scm (hypre): Update to 2020.0.
[source](modules, snippet): Remove.
[native-inputs]: Remove PERL, NETPBM and GHOSTSCRIPT.  Add PYTHON,
PYTHON-SPHINX and PYTHON-BREATHE.  Add TEXLIVE-ADJUSTBOX, TEXLIVE-AMSFONTS,
TEXLIVE-CAPTION, TEXLIVE-ETOOLBOX, TEXLIVE-JKNAPPEN, TEXLIVE-SECTSTY,
TEXLIVE-TEX-GYRE, TEXLIVE-WASY, TEXLIVE-XCOLOR, TEXLIVE-GENERIC-LISTOFITEMS,
TEXLIVE-GENERIC-ULEM, TEXLIVE-LATEX-CAPT-OF, TEXLIVE-LATEX-CMAP,
TEXLIVE-LATEX-COLORTBL, TEXLIVE-LATEX-ETOC, TEXLIVE-LATEX-FANCYHDR,
TEXLIVE-LATEX-FANCYVRB, TEXLIVE-LATEX-FLOAT, TEXLIVE-LATEX-FNCYCHAP,
TEXLIVE-LATEX-FRAMED, TEXLIVE-LATEX-GEOMETRY, TEXLIVE-LATEX-HANGING,
TEXLIVE-LATEX-MULTIROW, TEXLIVE-LATEX-NATBIB, TEXLIVE-LATEX-NEEDSPACE,
TEXLIVE-LATEX-NEWUNICODECHAR, TEXLIVE-LATEX-PARSKIP,
TEXLIVE-LATEX-STACKENGINE, TEXLIVE-LATEX-TABULARY, TEXLIVE-LATEX-TITLESEC,
TEXLIVE-LATEX-TOCLOFT, TEXLIVE-LATEX-UPQUOTE, TEXLIVE-LATEX-VARWIDTH,
TEXLIVE-LATEX-WASYSYM, and TEXLIVE-LATEX-WRAPFIG to TEXLIVE-UPDMAP.CFG.
[arguments]: Adjust doc build target and installation phase.  Remove trailing
 #t's.
 2021-06-06 00:12:53 +02:00
Marius Bakke bf84be15a8
gnu: texlive-latex-tools: Provide array-2016-10-06.sty. 
* gnu/packages/tex.scm (texlive-latex-tools)[arguments]: Add phase that makes
array.sty available with a different name.
 2021-06-06 00:12:53 +02:00
Marius Bakke 80c3374f05
gnu: Add texlive-latex-tocloft. 
* gnu/packages/tex.scm (texlive-latex-tocloft): New public variable.
 2021-06-06 00:12:53 +02:00
Marius Bakke b31730fec6
gnu: Add texlive-latex-stackengine. 
* gnu/packages/tex.scm (texlive-latex-stackengine): New public variable.
 2021-06-06 00:12:53 +02:00
Marius Bakke 29c5741ac1
gnu: Add texlive-latex-newunicodechar. 
* gnu/packages/tex.scm (texlive-latex-newunicodechar): New public variable.
 2021-06-06 00:12:53 +02:00
Marius Bakke 1f7018fbe1
gnu: Add texlive-latex-hanging. 
* gnu/packages/tex.scm (texlive-latex-hanging): New public variable.
 2021-06-06 00:12:53 +02:00
Marius Bakke 93b4299a78
gnu: Add texlive-latex-etoc. 
* gnu/packages/tex.scm (texlive-latex-etoc): New public variable.
 2021-06-06 00:12:53 +02:00
Marius Bakke 1612d88407
gnu: Add texlive-tex-gyre. 
* gnu/packages/tex.scm (texlive-tex-gyre): New public variable.
 2021-06-06 00:12:53 +02:00
Marius Bakke 5a69d3027c
gnu: dblatex: Remove unused TeX inputs. 
* gnu/packages/docbook.scm (dblatex)[inputs]: Remove TEXLIVE-LATEX-EEPIC,
TEXLIVE-LATEX-ESO-PIC, TEXLIVE-LATEX-OBERDIEK, TEXLIVE-LATEX-URL, and
TEXLIVE-FONTS-EC from updmap.cfg.
 2021-06-06 00:12:53 +02:00
Marius Bakke 00a2c472d0
gnu: texlive-graphics-def: Propagate missing dependency. 
* gnu/packages/tex.scm (texlive-graphics-def)[propagated-inputs]: New field.
Add TEXLIVE-LATEX-EPSTOPDF-PKG.
 2021-06-06 00:12:53 +02:00
Marius Bakke e3ce85725c
gnu: texlive-hyperref: Don't propagate texlive-oberdiek. 
* gnu/packages/tex.scm (texlive-hyperref)[propagated-inputs]: Remove
TEXLIVE-OBERDIEK.  Add TEXLIVE-GENERIC-ATBEGSHI, TEXLIVE-GENERIC-BITSET,
TEXLIVE-GENERIC-ETEXCMDS, TEXLIVE-GENERIC-GETTITLESTRING,
TEXLIVE-GENERIC-IFTEX, TEXLIVE-GENERIC-INFWARERR, TEXLIVE-GENERIC-INTCALC,
TEXLIVE-GENERIC-KVDEFINEKEYS, TEXLIVE-GENERIC-LTXCMDS,
TEXLIVE-GENERIC-PDFESCAPE, TEXLIVE-LATEX-AUXHOOK, TEXLIVE-LATEX-ATVERYEND,
TEXLIVE-LATEX-HYCOLOR, TEXLIVE-LATEX-KVOPTIONS, TEXLIVE-LATEX-LETLTXMACRO,
TEXLIVE-LATEX-PDFTEXCMDS, TEXLIVE-LATEX-REFCOUNT, and
TEXLIVE-LATEX-RERUNFILECHECK.
 2021-06-06 00:12:53 +02:00
Marius Bakke 7a06061662
gnu: texlive-base: Propagate texlive-kpathsea. 
* gnu/packages/tex.scm (texlive-base)[propagated-inputs]: Add
TEXLIVE-KPATHSEA.
 2021-06-06 00:12:53 +02:00
Marius Bakke ef52a9cad3
gnu: Add texlive-latex-rerunfilecheck. 
* gnu/packages/tex.scm (texlive-latex-rerunfilecheck): New public variable.
 2021-06-06 00:12:52 +02:00
Marius Bakke daf2e15187
gnu: Add texlive-generic-uniquecounter. 
* gnu/packages/tex.scm (texlive-generic-uniquecounter): New public variable.
 2021-06-06 00:12:52 +02:00
Marius Bakke 169060fe7c
gnu: Add texlive-generic-pdfescape. 
* gnu/packages/tex.scm (texlive-generic-pdfescape): New public variable.
 2021-06-06 00:12:52 +02:00
Marius Bakke a064a9152f
gnu: Add texlive-latex-kvoptions. 
* gnu/packages/tex.scm (texlive-latex-kvoptions): New public variable.
 2021-06-06 00:12:52 +02:00
Marius Bakke 29baa9290e
gnu: Add texlive-generic-kvsetkeys. 
* gnu/packages/tex.scm (texlive-generic-kvsetkeys): New public variable.
 2021-06-06 00:12:52 +02:00
Marius Bakke 4b439f07d6
gnu: Add texlive-generic-kvdefinekeys. 
* gnu/packages/tex.scm (texlive-generic-kvdefinekeys): New public variable.
 2021-06-06 00:12:52 +02:00
Marius Bakke e30373f8ac
gnu: Add texlive-generic-gettitlestring. 
* gnu/packages/tex.scm (texlive-generic-gettitlestring): New public variable.
 2021-06-06 00:12:52 +02:00
Marius Bakke 95e3a20985
gnu: Add texlive-generic-etexcmds. 
* gnu/packages/tex.scm (texlive-generic-etexcmds): New public variable.
 2021-06-06 00:12:52 +02:00
Marius Bakke d476433d70
gnu: Add texlive-generic-bitset. 
* gnu/packages/tex.scm (texlive-generic-bitset): New public variable.
 2021-06-06 00:12:52 +02:00
Marius Bakke 3e0dc201ec
gnu: Add texlive-generic-bigintcalc. 
* gnu/packages/tex.scm (texlive-generic-bigintcalc): New public variable.
 2021-06-06 00:12:52 +02:00
Marius Bakke 2d78486e60
gnu: Add texlive-generic-intcalc. 
* gnu/packages/tex.scm (texlive-generic-intcalc): New public variable.
 2021-06-06 00:12:52 +02:00
Marius Bakke e68df1408a
gnu: Add texlive-generic-atbegshi. 
* gnu/packages/tex.scm (texlive-generic-atbegshi): New public variable.
 2021-06-06 00:12:52 +02:00
Marius Bakke 935784ba34
gnu: Add texlive-latex-letltxmacro. 
* gnu/packages/tex.scm (texlive-latex-letltxmacro): New public variable.
 2021-06-06 00:12:51 +02:00
Marius Bakke 2c3c8ac45d
gnu: Add texlive-latex-pdftexcmds. 
* gnu/packages/tex.scm (texlive-latex-pdftexcmds): New public variable.
 2021-06-06 00:12:51 +02:00
Marius Bakke c1700a9bae
gnu: Add texlive-generic-ltxcmds. 
* gnu/packages/tex.scm (texlive-generic-ltxcmds): New public variable.
 2021-06-06 00:12:51 +02:00
Marius Bakke d136754211
gnu: Add texlive-generic-infwarerr. 
* gnu/packages/tex.scm (texlive-generic-infwarerr): New public variable.
 2021-06-06 00:12:51 +02:00
Marius Bakke df5569d514
gnu: Add texlive-latex-hycolor. 
* gnu/packages/tex.scm (texlive-latex-hycolor): New public variable.
 2021-06-06 00:12:51 +02:00
Marius Bakke 0a64d8e005
gnu: Add texlive-latex-epstopdf-pkg. 
* gnu/packages/tex.scm (texlive-latex-epstopdf-pkg): New public variable.
 2021-06-06 00:12:51 +02:00
Marius Bakke f2543d82ae
gnu: Add texlive-latex-auxhook. 
* gnu/packages/tex.scm (texlive-latex-auxhook): New public variable.
 2021-06-06 00:12:51 +02:00
Marius Bakke 25de551c26
gnu: Add texlive-latex-atveryend. 
* gnu/packages/tex.scm (texlive-latex-atveryend): New public variable.
 2021-06-06 00:12:51 +02:00
Marius Bakke 730e7fcb77
gnu: simple-texlive-package: Fix shebang patching. 
* gnu/packages/tex.scm (simple-texlive-package)[arguments]: Copy the working
directory instead of the source directory to the output.
 2021-06-06 00:12:51 +02:00
Marius Bakke 5e61abcaf6
gnu: dblatex: Update to 0.3.12. 
* gnu/packages/docbook.scm (dblatex): Update to 0.3.12.
[source](uri): Adjust file name.
[inputs]: Add TEXLIVE-LATEX-BOOKMARK and TEXLIVE-LATEX-REFCOUNT.
[arguments]: Remove #:python.
 2021-06-06 00:12:51 +02:00
Marius Bakke 4d85dde0ef
gnu: Add texlive-latex-bookmark. 
* gnu/packages/tex.scm (texlive-latex-bookmark): New public variable.
 2021-06-06 00:12:51 +02:00
Marius Bakke a8e8c9e59c
gnu: Add texlive-latex-refcount. 
* gnu/packages/tex.scm (texlive-latex-refcount): New public variable.
 2021-06-06 00:12:50 +02:00
Marius Bakke 7747df1bc2
gnu: TeX Live: Update to 2020.0. 
* guix/build-system/texlive.scm (%texlive-tag): Set to 2020.0.
(%texlive-revision): Set to 54632.
* gnu/packages/tex.scm (texlive-extra-src, texlive-texmf-src, texlive-bin,
texlive-texmf, texlive): Update to 20200406.
(texlive-bin)[source](patches): Remove.
[arguments]: Adjust poppler compatibility phase for new upstream patches.
* gnu/packages/tex.scm (hyph-utf8-scripts, texlive-docstrip, texlive-unicode-data
texlive-hyphen-base, texlive-dvips, texlive-metafont-base, texlive-fontinst,
texlive-fontname, texlive-tex-plain, texlive-hyphen-bulgarian, texlive-hyphen-chinese,
texlive-hyphen-hungarian, texlive-hyphen-latin, texlive-hyphen-sanskrit,
texlive-hyphen-spanish, texlive-hyph-utf8, texlive-kpathsea,
texlive-latexconfig, texlive-latex-base, texlive-union,
texlive-latex-filecontents, texlive-latex-fancyvrb, texlive-graphics-def,
texlive-latex-graphics, texlive-latex-oberdiek, texlive-latex-tools,
texlive-latex-l3kernel, texlive-latex-l3packages, texlive-latex-fontspec,
texlive-latex-amsmath, texlive-latex-babel, texlive-latex-draftwatermark,
texlive-etoolbox, texlive-latex-geometry, texlive-latex-polyglossia,
texlive-latex-supertabular, texlive-tex-texinfo, texlive-latex-appendix,
texlive-latex-colortbl, texlive-latex-listings, texlive-inconsolata,
texlive-latex-enumitem, texlive-latex-multirow, texlive-latex-overpic,
texlive-latex-parskip, texlive-latex-pdfpages, texlive-libertine,
texlive-latex-titlesec, texlive-metapost, texlive-latex-acmart,
texlive-latex-wasysym, texlive-latex-preview, texlive-latex-acronym,
texlive-pdftex, texlive-latex-media9, texlive-latex-ocgx2, texlive-latex-ms,
texlive-generic-ulem, texlive-latex-pgf, texlive-latex-koma-script,
texlive-generic-listofitems, texlive-bibtex, texlive-context-base,
texlive-beamer, texlive-pstricks, texlive-marginnote, texlive-iftex,
texlive-tools, texlive-siunitx, texlive-booktabs, texlive-csquotes,
texlive-biblatex, texlive-microtype, texlive-caption, texlive-ydoc,
texlive-courier, texlive-hyperref, texlive-fontspec, texlive-l3build,
texlive-luaotfload, texlive-babel, texlive-tipa, texlive-jknappen,
texlive-wasy, texlive-context, texlive-cabin, texlive-fourier,
texlive-mweights, texlive-newtx, texlive-xcharter, texlive-tcolorbox): Update
hashes.
(texlive-hyphen-bulgarian): Don't include removed files.
(texlive-hyphen-hungarian, texlive-hyphen-sanskrit): Adjust for directory
rename.
(texlive-hyphen-chinese, texlive-hyphen-latin): Add more files.
(texlive-hyphen-macedonian): New public variable.
(texlive-metafont-base)[source]: Switch to SVN-MULTI-FETCH.
[arguments]: Adjust for extra source files.
(texlive-latex-base)[arguments]: Disable more formats.
[propagated-inputs]: Add TEXLIVE-HYPHEN-MACEDONIAN.
(texlive-fontinst): Don't include "scripts/texlive/fontinst.sh".
(texlive-generic-iftex): New public variable.
(texlive-iftex, texlive-generic-ifxetex): Deprecate in favor of
TEXLIVE-GENERIC-IFTEX.
(texlive-latex-oberdiek)[propagated-inputs]: Change from
TEXLIVE-GENERIC-IFXETEX to TEXLIVE-GENERIC-IFTEX.
(texlive-latex-xkeyval)[native-inputs]: Likewise.
(texlive-default-updmap.cfg): Remove variable.
* gnu/packages/patches/texlive-bin-poppler-0.83.patch,
gnu/packages/patches/texlive-bin-poppler-0.86.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
 2021-06-06 00:12:50 +02:00
Dion Mendel 08b55f1443
gnu: Add libdqlite. 
* gnu/packages/cluster.scm (libdqlite): New Variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-06-05 23:39:29 +02:00
Dion Mendel 404f6145ee
gnu: Add lxcfs. 
* gnu/packages/virtualization.scm (lxcfs): New Variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-06-05 23:39:29 +02:00
Brendan Tildesley 23ab8d417e
gnu: gparted: Update to 1.3.0. 
* gnu/packages/disk.scm (gparted): Update to 1.3.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-06-05 23:39:29 +02:00
Jonathan Brielmaier f1e0e5fde3
gnu: icedove: Update to 78.11.0 [fixes CVE-2021-29967]. 
* gnu/packages/gnuzilla.scm (icedove): Update to 78.11.0.
 2021-06-05 23:07:06 +02:00
Antero Mejr 7905b901a2
gnu: Add nitrocli. 
* gnu/packages/security-token.scm (nitrocli): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-05 22:17:50 +02:00
Antero Mejr 3463559d55
gnu: Add rust-base32-0.4. 
* gnu/packages/crates-io.scm (rust-base32-0.4): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-05 22:17:50 +02:00
Antero Mejr add0c5f2b1
gnu: Add rust-envy-0.4. 
* gnu/packages/crates-io.scm (rust-envy-0.4): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-05 22:17:49 +02:00
Antero Mejr 7b5f5aa82b
gnu: Add rust-merge-0.1. 
* gnu/packages/crates-io.scm (rust-merge-0.1): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-05 22:17:49 +02:00
Antero Mejr 9c92fb862d
gnu: Add rust-merge-derive-0.1. 
* gnu/packages/crates-io.scm (rust-merge-derive-0.1): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-05 22:12:01 +02:00
Antero Mejr ed30001472
gnu: Add rust-nitrokey-0.9. 
* gnu/packages/crates-io.scm (rust-nitrokey-0.9): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-05 22:11:53 +02:00
Antero Mejr 51f5292014
gnu: Add rust-progressing-3. 
* gnu/packages/crates-io.scm (rust-progressing-3): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-05 22:11:24 +02:00
Antero Mejr 38233e745e
gnu: rust-structopt-0.3: Update to 0.3.21. 
* gnu/packages/crates-io.scm (rust-structopt-0.3): Update to 0.3.21.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-05 22:10:41 +02:00
Antero Mejr febfd4ce0d
gnu: rust-structopt-derive-0.4: Update to 0.4.14. 
* gnu/packages/crates-io.scm (rust-structopt-derive-0.4): Update to 0.4.14.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-05 22:10:04 +02:00
Tobias Geerinckx-Rice bdd2970c08
gnu: wgetpaste: Update to 2.32. 
* gnu/packages/wget.scm (wgetpaste): Update to 2.32.
[source]: Remove patch.
* gnu/packages/patches/wgetpaste-update-bpaste.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2021-06-05 19:14:15 +02:00
Tobias Geerinckx-Rice 2e97761efe
gnu: wgetpaste: Build from Git. 
* gnu/packages/wget.scm (wgetpaste)[source]: Use GIT-FETCH and GIT-FILE-NAME.
 2021-06-05 19:14:14 +02:00
Tobias Geerinckx-Rice c107a30bb4
gnu: wgetpaste: Don't install LICENSE file twice. 
* gnu/packages/wget.scm (wgetpaste)[arguments]: Leave LICENSE file
installation to the aptly-named 'install-license-files default phase.
 2021-06-05 19:14:14 +02:00
Tobias Geerinckx-Rice a80cde0326
gnu: console-setup: Update to 1.203. 
* gnu/packages/xorg.scm (console-setup): Update to 1.203.
 2021-06-05 19:01:08 +02:00
Tobias Geerinckx-Rice cd6c61f8c8
gnu: nzbget: Update to 21.1. 
* gnu/packages/networking.scm (nzbget): Update to 21.1.
[source]: Remove upstreamed snippet.
 2021-06-05 19:01:08 +02:00
Tobias Geerinckx-Rice ddc9da2ba9
gnu: faudio: Update to 21.06. 
* gnu/packages/audio.scm (faudio): Update to 21.06.
 2021-06-05 18:29:56 +02:00
Tobias Geerinckx-Rice f1a4b85af1
gnu: wireshark: Inspect HTTP/2 headers. 
* gnu/packages/networking.scm (wireshark)[inputs]: Add nghttp2:lib.
 2021-06-05 18:29:56 +02:00
Tobias Geerinckx-Rice 0339829a63
gnu: wireshark: Support more compression algorithms. 
* gnu/packages/networking.scm (wireshark)[inputs]: Add google-brotli,
minizip, and zstd:lib.
 2021-06-05 18:29:56 +02:00
Tobias Geerinckx-Rice debcc760e8
gnu: qca: Update to 2.3.3. 
* gnu/packages/kde.scm (qca): Update to 2.3.3.
 2021-06-05 18:29:55 +02:00
Tobias Geerinckx-Rice d22b1b21f6
gnu: iperf: Update to 3.10.1. 
* gnu/packages/networking.scm (iperf): Update to 3.10.1.
 2021-06-05 18:29:55 +02:00
Tobias Geerinckx-Rice c6e36ee2dc
gnu: ispell: Update to 3.4.04. 
* gnu/packages/aspell.scm (ispell): Update to 3.4.04.
 2021-06-05 18:29:55 +02:00
Tobias Geerinckx-Rice 605a40b385
gnu: nnn: Remove marketing hyperbole. 
* gnu/packages/admin.scm (nnn)[description]: Gush less.
 2021-06-05 18:29:55 +02:00
Tobias Geerinckx-Rice 49dd606f57
gnu: nnn: Use #:make-flags over Makefile patching. 
* gnu/packages/admin.scm (nnn)[arguments]: Remove 'patch-pkg-config
phase.  Set PKG_CONFIG in #:make-flags instead.
 2021-06-05 18:29:55 +02:00
Tobias Geerinckx-Rice 1e1a274ffd
gnu: nnn: Update to 4.1.1. 
* gnu/packages/admin.scm (nnn): Update to 4.1.1.
 2021-06-05 18:29:55 +02:00
Tobias Geerinckx-Rice ddd871c18a
gnu: thermald: Compile with -Werror again. 
* gnu/packages/admin.scm (thermald)[arguments]: Remove substitution,
and a #t whilst we're here.
 2021-06-05 18:29:54 +02:00
Tobias Geerinckx-Rice 9412762f9b
gnu: thermald: Update to 2.4.5. 
* gnu/packages/admin.scm (thermald): Update to 2.4.5.
 2021-06-05 18:29:54 +02:00
Nicolas Goaziou de1b8f7143
gnu: wireshark: Update to 3.4.6. 
* gnu/packages/networking.scm (wireshark): Update to 3.4.6.
 2021-06-05 17:48:42 +02:00
Nicolas Goaziou 38eaba9a8e
gnu: giac: Update to 1.7.0-11. 
* gnu/packages/algebra.scm (giac): Update to 1.7.0-11.
 2021-06-05 17:24:13 +02:00
Carl Dong 20d9535e1b
gnu: nsis: Respect SOURCE-DATE-EPOCH for reproducibility 
* gnu/packages/patches/nsis-source-date-epoch.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/installers.scm (make-nsis)[source]: Apply it.
 2021-06-05 11:21:11 -04:00
Nicolas Goaziou 9da90938c6
gnu: rosegarden: Update to 21.06. 
* gnu/packages/music.scm (rosegarden): Update to 21.06.
 2021-06-05 16:08:34 +02:00
Nicolas Goaziou bb7706dcdd
gnu: emacs-undercover: Update to 0.8.1. 
* gnu/packages/emacs-xyz.scm (emacs-undercover): Update to 0.8.1.
 2021-06-05 15:57:59 +02:00
Nicolas Goaziou bdab742322
gnu: emacs-all-the-icons: Update to 5.0.0. 
* gnu/packages/emacs-xyz.scm (emacs-all-the-icons): Update to 5.0.0.
 2021-06-05 15:56:20 +02:00
Nicolas Goaziou fb41cc6c41
gnu: emacs-leaf: Update to 4.4.8. 
* gnu/packages/emacs-xyz.scm (emacs-leaf): Update to 4.4.8.
 2021-06-05 15:52:52 +02:00
Adam Kandur 11f18341db
gnu: Add emacs-vscode-dark-plus. 
* gnu/packages/emacs-xyz.scm (emacs-vscode-dark-plus): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-05 15:47:52 +02:00
Alexandr Vityazev 087fbcfe48
gnu: Add emacs-flymake-kondor. 
* gnu/packages/emacs-xyz.scm (emacs-flymake-kondor): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-05 14:25:30 +02:00
Alexandr Vityazev 00f8451ea1
gnu: Add emacs-flymake-quickdef. 
* gnu/packages/emacs-xyz.scm (emacs-flymake-quickdef): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-05 14:23:28 +02:00
Alexandr Vityazev 0a4b2da0ed
gnu: Add emacs-anakondo. 
* gnu/packages/emacs-xyz.scm (emacs-anakondo): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-05 14:10:54 +02:00
Alexandr Vityazev c6d4f974bc
gnu: Add emacs-clojure-snippets. 
* gnu/packages/emacs-xyz.scm (emacs-clojure-snippets): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-05 14:00:42 +02:00
Alexandr Vityazev fec881eac3
gnu: Add emacs-kibit-helper. 
* gnu/packages/emacs-xyz.scm (emacs-kibit-helper): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-05 13:50:10 +02:00
Xinglu Chen b61ee34c9d
gnu: Add emacs-djvu3. 
* gnu/packages/emacs-xyz.scm (emacs-djvu3): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-05 13:43:36 +02:00
Xinglu Chen 612e5b8528
gnu: Add emacs-hg-histedit. 
* gnu/packages/emacs-xyz.scm (emacs-hg-histedit): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-05 13:41:42 +02:00
Xinglu Chen bbf54272c6
gnu: Add emacs-hgignore-mode. 
* gnu/packages/emacs-xyz.scm (emacs-hgignore-mode): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-05 13:39:30 +02:00
Pierre Neidhardt ac9da35707
gnu: emacs-webfeeder: Update to 1.1.2. 
* gnu/packages/emacs-xyz.scm (emacs-webfeeder): Update to 1.1.2.
 2021-06-05 12:56:53 +02:00
Guillaume Le Vaillant f9a7a365ed
gnu: liquid-dsp: Remove unused input. 
* gnu/packages/radio.scm (liquid-dsp)[inputs]: Remove fftw.
 2021-06-05 11:45:47 +02:00
Guillaume Le Vaillant 3a8d0eff9e
gnu: liquid-dsp: Remove static library. 
* gnu/packages/radio.scm (liquid-dsp)[arguments]: Add 'delete-static-library'
  phase.
 2021-06-05 11:43:00 +02:00
Guillaume Le Vaillant 573f777495
gnu: liquid-dsp: Add support for more error correction codes. 
* gnu/packages/radio.scm (liquid-dsp)[inputs]: Add libfec.
 2021-06-05 11:38:09 +02:00
Guillaume Le Vaillant ba9cbb6612
gnu: Add libfec. 
* gnu/packages/radio.scm (libfec): New variable.
 2021-06-05 11:23:10 +02:00
Ricardo Wurmus f9ef881e4d
gnu: python-pypandoc: Use patched texlive-amsfonts. 
* gnu/packages/python-xyz.scm (python-pypandoc)[native-inputs]: Use
texlive-amsfonts/patched.
 2021-06-05 09:26:14 +02:00
Ricardo Wurmus 45aae518e7
gnu: python-ipython-documentation: Use patched texlive-amsfonts. 
* gnu/packages/python-xyz.scm (python-ipython-documentation)[native-inputs]:
Use texlive-amsfonts/patched.
 2021-06-05 09:26:14 +02:00
Ricardo Wurmus ace97406f2
gnu: python-matplotlib-documentation: Use patched texlive-amsfonts. 
* gnu/packages/python-xyz.scm (python-matplotlib-documentation)[native-inputs]:
Use texlive-amsfonts/patched.
 2021-06-05 09:26:14 +02:00
Ricardo Wurmus d71751526f
gnu: python-numpy-documentation: Use patched texlive-amsfonts. 
* gnu/packages/python-xyz.scm (python-numpy-documentation)[native-inputs]: Use
texlive-amsfonts/patched.
 2021-06-05 09:26:14 +02:00
Ricardo Wurmus af8a5285d2
gnu: libosmo-dsp: Use patched texlive-amsfonts. 
* gnu/packages/radio.scm (libosmo-dsp)[native-inputs]: Use
texlive-amsfonts/patched.
 2021-06-05 09:26:14 +02:00
Ricardo Wurmus 232bdb900d
gnu: gnuradio: Use patched texlive-amsfonts. 
* gnu/packages/radio.scm (gnuradio)[native-inputs]: Use
texlive-amsfonts/patched.
 2021-06-05 09:26:14 +02:00
Ricardo Wurmus 41bbbd53d2
gnu: asymptote: Use patched texlive-amsfonts. 
Fixes <https://bugs.gnu.org/39101>.

* gnu/packages/plotutils.scm (asymptote)[native-inputs]: Use
texlive-amsfonts/patched.
 2021-06-05 09:26:14 +02:00
Ricardo Wurmus 11caa5f68a
gnu: emacs-auctex: Use patched texlive-amsfonts. 
* gnu/packages/emacs-xyz.scm (emacs-auctex)[inputs]: Use
texlive-amsfonts/patched.
 2021-06-05 09:26:14 +02:00
Ricardo Wurmus 701a115533
gnu: dblatex: Use patched texlive-amsfonts. 
* gnu/packages/docbook.scm (dblatex)[inputs]: Use texlive-amsfonts/patched.
 2021-06-05 09:26:14 +02:00
Ricardo Wurmus c2b6d36b66
gnu: pari-gp: Use patched texlive-amsfonts. 
* gnu/packages/algebra.scm (pari-gp)[native-inputs]: Use
texlive-amsfonts/patched.
 2021-06-05 09:26:13 +02:00
Pierre Neidhardt c128d4f931
gnu: sbcl-cmd: Update to 20210531. 
* gnu/packages/lisp-xyz.scm (sbcl-cmd): Update to 20210531.
 2021-06-05 09:24:59 +02:00
Ricardo Wurmus 8f12002f6e
gnu: r-sushi: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-sushi): Update to 1.30.0.
 2021-06-05 09:12:58 +02:00
Ricardo Wurmus abe7628a05
gnu: r-guitar: Update to 2.8.0. 
* gnu/packages/bioconductor.scm (r-guitar): Update to 2.8.0.
 2021-06-05 09:12:58 +02:00
Ricardo Wurmus 3a5642d72e
gnu: r-chromstar: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-chromstar): Update to 1.18.0.
 2021-06-05 09:12:58 +02:00
Ricardo Wurmus 3e2052e7da
gnu: r-snpstats: Update to 1.42.0. 
* gnu/packages/bioconductor.scm (r-snpstats): Update to 1.42.0.
 2021-06-05 09:12:58 +02:00
Ricardo Wurmus 8fa5a4d753
gnu: r-pathview: Update to 1.32.0. 
* gnu/packages/bioconductor.scm (r-pathview): Update to 1.32.0.
 2021-06-05 09:12:58 +02:00
Ricardo Wurmus b4cea45e7c
gnu: r-ldblock: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-ldblock): Update to 1.22.0.
 2021-06-05 09:12:58 +02:00
Ricardo Wurmus 2860208c42
gnu: r-kegggraph: Update to 1.52.0. 
* gnu/packages/bioconductor.scm (r-kegggraph): Update to 1.52.0.
[propagated-inputs]: Add r-rgraphviz.
 2021-06-05 09:12:58 +02:00
Ricardo Wurmus a06d13be09
gnu: r-gwascat: Update to 2.24.0. 
* gnu/packages/bioconductor.scm (r-gwascat): Update to 2.24.0.
[propagated-inputs]: Add r-annotationhub.
 2021-06-05 09:12:58 +02:00
Ricardo Wurmus bdfa1178b9
gnu: r-gviz: Update to 1.36.0. 
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.36.0.
 2021-06-05 09:12:57 +02:00
Ricardo Wurmus 46b7d19dcc
gnu: r-ggbio: Update to 1.40.0. 
* gnu/packages/bioconductor.scm (r-ggbio): Update to 1.40.0.
 2021-06-05 09:12:57 +02:00
Ricardo Wurmus bd6d0007d9
gnu: r-erma: Update to 1.8.0. 
* gnu/packages/bioconductor.scm (r-erma): Update to 1.8.0.
 2021-06-05 09:12:57 +02:00
Ricardo Wurmus 8ad54dc134
gnu: r-catalyst: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-catalyst): Update to 1.16.0.
 2021-06-05 09:12:57 +02:00
Ricardo Wurmus 2fe8673263
gnu: r-msmstests: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-msmstests): Update to 1.30.0.
 2021-06-05 09:12:57 +02:00
Ricardo Wurmus e501608db3
gnu: r-msmseda: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-msmseda): Update to 1.30.0.
 2021-06-05 09:12:57 +02:00
Ricardo Wurmus b5a387745a
gnu: r-biocio: Update to 1.2.0. 
* gnu/packages/bioconductor.scm (r-biocio): Update to 1.2.0.
[propagated-inputs]: Remove r-genomicranges and r-rcurl.
 2021-06-05 09:12:57 +02:00
Ricardo Wurmus aaf095825b
gnu: r-mscoreutils: Update to 1.4.0. 
* gnu/packages/bioconductor.scm (r-mscoreutils): Update to 1.4.0.
[propagated-inputs]: Add r-clue.
 2021-06-05 09:12:57 +02:00
Ricardo Wurmus 47e291df84
gnu: r-delayedmatrixstats: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.14.0.
[propagated-inputs]: Remove r-biocparallel and r-hdf5array.
 2021-06-05 09:12:57 +02:00
Ricardo Wurmus 360477c202
gnu: r-sparsematrixstats: Update to 1.4.0. 
* gnu/packages/bioconductor.scm (r-sparsematrixstats): Update to 1.4.0.
 2021-06-05 09:12:57 +02:00
Ricardo Wurmus 015ba64bc0
gnu: r-scran: Update to 1.20.1. 
* gnu/packages/bioconductor.scm (r-scran): Update to 1.20.1.
[propagated-inputs]: Remove r-biocneighbors; add r-metapod.
 2021-06-05 09:12:57 +02:00
Ricardo Wurmus d9755a22f6
gnu: r-scater: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-scater): Update to 1.20.0.
[propagated-inputs]: Add r-beachmat, r-rcolorbrewer, and r-rtsne.
 2021-06-05 09:12:57 +02:00
Ricardo Wurmus 851894f8da
gnu: r-scuttle: Update to 1.2.0. 
* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.2.0.
 2021-06-05 09:12:57 +02:00
Ricardo Wurmus b21a73c00b
gnu: r-singlecellexperiment: Update to 1.14.1. 
* gnu/packages/bioconductor.scm (r-singlecellexperiment): Update to 1.14.1.
[propagated-inputs]: Add r-delayedarray and r-genomicranges.
 2021-06-05 09:12:57 +02:00
Ricardo Wurmus 71e392966a
gnu: r-chromvar: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-chromvar): Update to 1.14.0.
 2021-06-05 09:12:56 +02:00
Ricardo Wurmus 56a2dcfdc7
gnu: r-motifmatchr: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-motifmatchr): Update to 1.14.0.
 2021-06-05 09:12:56 +02:00
Ricardo Wurmus 0b6b42b6c4
gnu: r-tfbstools: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-tfbstools): Update to 1.30.0.
 2021-06-05 09:12:56 +02:00
Ricardo Wurmus a92a277873
gnu: r-cner: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-cner): Update to 1.28.0.
 2021-06-05 09:12:56 +02:00
Ricardo Wurmus 370d020e88
gnu: r-beachmat: Update to 2.8.0. 
* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.8.0.
[propagated-inputs]: Add r-rcpp.
 2021-06-05 09:12:56 +02:00
Ricardo Wurmus dbb929bf4a
gnu: r-hitc: Update to 1.36.0. 
* gnu/packages/bioconductor.scm (r-hitc): Update to 1.36.0.
 2021-06-05 09:12:56 +02:00
Ricardo Wurmus 914bd41da9
gnu: r-fithic: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-fithic): Update to 1.18.0.
 2021-06-05 09:12:56 +02:00
Ricardo Wurmus 64b03c66ad
gnu: r-rgraphviz: Update to 2.36.0. 
* gnu/packages/bioconductor.scm (r-rgraphviz): Update to 2.36.0.
 2021-06-05 09:12:56 +02:00
Ricardo Wurmus 5565b8bada
gnu: r-s4vectors: Update to 0.30.0. 
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.30.0.
 2021-06-05 09:12:56 +02:00
Ricardo Wurmus a78daaa572
gnu: r-preprocesscore: Update to 1.54.0. 
* gnu/packages/bioconductor.scm (r-preprocesscore): Update to 1.54.0.
 2021-06-05 09:12:56 +02:00
Ricardo Wurmus a9f203ba6c
gnu: r-icens: Update to 1.64.0. 
* gnu/packages/bioconductor.scm (r-icens): Update to 1.64.0.
 2021-06-05 09:12:56 +02:00
Ricardo Wurmus 3b19239c0f
gnu: r-m3c: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-m3c): Update to 1.14.0.
 2021-06-05 09:12:56 +02:00
Ricardo Wurmus 06dd2fd625
gnu: r-rgreat: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-rgreat): Update to 1.24.0.
 2021-06-05 09:12:56 +02:00