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19411 Commits (649cf27c01748cbbea4d5410f860c559d2d3e62c)

Author SHA1 Message Date
Roel Janssen 325c039c1d
gnu: Add r-sparql.
* gnu/packages/bioinformatics.scm (r-sparql): New variable.
2017-09-05 11:02:03 +02:00
Tobias Geerinckx-Rice c0ac72e18c
gnu: epiphany: Update to 3.24.4.
* gnu/packages/gnome.scm (epiphany): Update to 3.24.4.
2017-09-05 05:44:27 +02:00
Tobias Geerinckx-Rice b8fb94d5b8
gnu: libvirt: Make selected inputs native-inputs.
* gnu/packages/virtualization.scm (libvirt)[inputs]: Move perl, polkit, and
python from here...
[native-inputs]: ...to here.
2017-09-05 05:27:41 +02:00
Tobias Geerinckx-Rice 2f110b32a4
gnu: libvirt: Update to 3.7.0.
* gnu/packages/virtualization.scm (libvirt): Update to 3.7.0.
[native-inputs]: Add libxslt for xsltproc.
2017-09-05 05:27:40 +02:00
Tobias Geerinckx-Rice 864f2f0ef0
gnu: python-libvirt: Update to 3.7.0.
* gnu/packages/virtualization.scm (python-libvirt): Update to 3.7.0.
2017-09-05 05:27:40 +02:00
Tobias Geerinckx-Rice b3fee5c141
gnu: Use HTTPS for libvirt.org.
* gnu/packages/virtualization.scm (libvirt, python-libvirt)[home-page]:
Use HTTPS.
2017-09-05 05:27:39 +02:00
Mark H Weaver b8b0f536a4
gnu: libidn2: Replace with 2.0.4 [security fixes].
* gnu/packages/libidn.scm (libidn2)[replacement]: New field.
(libidn2-2.0.4): New variable.
2017-09-04 20:39:20 -04:00
Ludovic Courtès a913d9d926
gnu: emacs-tiny: Fix typo.
* gnu/packages/emacs.scm (emacs-tiny)[description]: Fix typo.
2017-09-04 23:52:44 +02:00
Christopher Baines 26361de404
gnu: Add emacs-minitest.
* gnu/packages/emacs.scm (emacs-minitest): New variable.
2017-09-04 22:31:37 +01:00
Christopher Baines 4138e782dc
vm: Remove redundant conditional in system-disk-image.
* gnu/system/vm.scm (system-disk-image): Remove redundant conditional for
  #:file-system-type when calling qemu-image.
2017-09-04 22:30:04 +01:00
Marius Bakke c427fda233
gnu: classpath-devel: Fix build after d10092b849.
* gnu/packages/java.scm (classpath-devel)[arguments]: Actually run 'bootstrap'
phase.
2017-09-04 22:08:55 +02:00
Alex Kost 8505d34829
gnu: emacs-browse-at-remote: Simplify 'check' phase.
* gnu/packages/emacs.scm (emacs-browse-at-remote)[native-inputs]: Add
'ert-runner'.
[arguments]: Run it in the 'check' phase.
2017-09-04 22:44:59 +03:00
Efraim Flashner 77bb6c227b
gnu: gpm: Fix build.
* gnu/packages/linux.scm (gpm)[arguments]: Patch autogen.sh shebang
during the 'boottstrap phase.
2017-09-04 22:36:01 +03:00
Efraim Flashner b82c63d013
gnu: quassel: Update package definition.
* gnu/packages/irc.scm (quassel)[source]: Remove bundled scripts.
[arguments]: Update comments in 'configure-flags.
[inputs]: Remove oxygen-icons. Move extra-cmake-modules and qttools ...
[native-inputs]: ... to here.
2017-09-04 22:21:33 +03:00
Leo Famulari 4b1dd9ab31
gnu: i3-wm: Update to 4.14.
* gnu/packages/wm.scm (i3-wm): Update to 4.14.
2017-09-04 11:19:27 -04:00
Leo Famulari 6cdb0f4d12
gnu: mpd: Update to 0.20.10.
* gnu/packages/mpd.scm (mpd): Update to 0.20.10.
2017-09-04 11:19:23 -04:00
Maxim Cournoyer b9f67d6dda
services: Add auto-enable? parameter to the bluetooth-service.
* gnu/services/desktop.scm (bluetooth-configuration): New record.
(bluetooth-shepherd-service): Use it.
(bluetooth-directory): New method.
(bluetooth-service-type): Use it to extend the etc-service-type service.
(bluetooth-service): Add `auto-enable?' parameter.
* doc/guix.texi (Desktop Services): Document it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-09-04 15:41:24 +02:00
Oleg Pykhalov 65101a2596
gnu: Add python-ghp-import.
* gnu/packages/version-control.scm (python-ghp-import, python2-ghp-import):
New variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-09-04 15:24:04 +02:00
Oleg Pykhalov 6325309898
gnu: Add emacs-tiny.
* gnu/packages/emacs.scm (emacs-tiny): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-09-04 15:24:04 +02:00
Paul Garlick c4d4a77923
gnu: pt-scotch32: use keyword arguments from "scotch32"
*gnu/packages/maths.scm (pt-scotch32) [arguments]: substitute keyword
arguments from "scotch32" package, ensuring that the INTSIZE32 macro is
set

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-09-04 15:24:04 +02:00
Mark H Weaver 6bd1c41e87
gnu: linux-libre: Update to 4.13.
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.13.
(%linux-libre-hash): Update hash.
* gnu/packages/aux-files/linux-libre/4.12-i686.conf,
gnu/packages/aux-files/linux-libre/4.12-x86_64.conf: Delete files.
* gnu/packages/aux-files/linux-libre/4.13-i686.conf,
gnu/packages/aux-files/linux-libre/4.13-x86_64.conf: New files.
* Makefile.am (AUX_FILES): Adjust accordingly.
2017-09-04 05:31:07 -04:00
Efraim Flashner 709a3bb7b8
gnu: weechat: Change to cmake-build-system.
* gnu/packages/irc.scm (weechat)[build-system]: Switch to
cmake-build-system.
[arguments]: Remove configure-flags, disable tets, remove
'autogen phase.
[inputs]: Remove diffutils, libltdl, openssl, cyrus-sasl. Move gettext ...
[native-inputs]: ... to here. Remove autoconf, file, autogen, automake,
libtool.
2017-09-04 11:21:42 +03:00
Kei Kebreau d10092b849
gnu: Put autoconf-related phases immediately after the 'unpack phase.
* gnu/packages/audio.scm (audacity, rtmidi)[arguments]: Correct phases
accordingly.
* gnu/packages/bioinformatics.scm (mash, seek, vsearch, emboss,
htslib-for-sambamba)[arguments]: Likewise.
* gnu/packages/ci.scm (cuirass)[arguments]: Likewise.
* gnu/packages/compression.scm (minizip, xdelta)[arguments]: Likewise.
* gnu/packages/cpp.scm (libzen)[arguments]: Likewise.
* gnu/packages/crypto.scm (opendht)[arguments]: Likewise.
* gnu/packages/databases.scm (4store, mdbtools)[arguments]: Likewise.
* gnu/packages/debug.scm (stress-make)[arguments]: Likewise.
* gnu/packages/dns.scm (dnscrypt-proxy, dnscrypt-wrapper)[arguments]:
Likewise.
* gnu/packages/emacs.scm (emacs-pdf-tools)[arguments]: Likewise.
* gnu/packages/embedded.scm (libjaylink, openocd)[arguments]: Likewise.
* gnu/packages/engineering.scm (gerbv)[arguments]: Likewise.
* gnu/packages/erlang.scm (erlang)[arguments]: Likewise.
* gnu/packages/ftp.scm (weex)[arguments]: Likewise.
* gnu/packages/gnome.scm (dia)[arguments]: Likewise.
* gnu/packages/gnunet.scm (gnurl, guile-gnunet)[arguments]: Likewise.
* gnu/packages/gtk.scm (guile-rsvg, graphene)[arguments]: Likewise.
* gnu/packages/guile.scm (guildhall, guile-ics, guile-sqlite3)[arguments]:
Likewise.
* gnu/packages/ibus.scm (ibus-libpinyin)[arguments]: Likewise.
* gnu/packages/irc.scm (weechat)[arguments]: Likewise.
* gnu/packages/java.scm (classpath-devel)[arguments]: Likewise.
* gnu/packages/libreoffice.scm (libetonyek)[arguments]: Likewise.
* gnu/packages/libusb.scm (hidapi)[arguments]: Likewise.
* gnu/packages/linux.scm (gpm)[arguments]: Likewise.
* gnu/packages/logging.scm (glog)[arguments]: Likewise.
* gnu/packages/machine-learning.scm (ghmm)[arguments]: Likewise.
* gnu/packages/mail.scm (dovecot-trees, dovecot-libsodium-plugin, esmtp)
[arguments]: Likewise.
* gnu/packages/messaging.scm (freetalk, libmesode, libstrophe)[arguments]:
Likewise.
* gnu/packages/microcom.scm (microcom)[arguments]: Likewise.
* gnu/packages/ocaml.scm (ocaml-ssl)[arguments]: Likewise.
* gnu/packages/parallel.scm (slurm)[arguments]: Likewise.
* gnu/packages/pdf.scm (libharu)[arguments]: Likewise.
* gnu/packages/samba.scm (cifs-utils)[arguments]: Likewise.
* gnu/packages/serialization.scm (msgpack)[arguments]: Likewise.
* gnu/packages/shells.scm (scsh)[arguments]: Likewise.
* gnu/packages/telephony.scm (libiax2)[arguments]: Likewise.
* gnu/packages/textutils.scm (dotconf)[arguments]: Likewise.
* gnu/packages/version-control.scm (findnewest)[arguments]: Likewise.
* gnu/packages/video.scm (libmediainfo, mediainfo)[arguments]: Likewise.
2017-09-04 00:10:59 -04:00
Efraim Flashner 5804c7b616
gnu: libmateweather: Update inputs.
* gnu/packages/mate.scm (libmateweather)[inputs]: Remove gdk-pixpuf.
Move dconf ...
[native-inputs]: ... to here.
2017-09-03 18:01:12 +03:00
ng0 6a548c56ef
gnu: mate-desktop: Add 'gtk-doc' back to native-inputs.
* gnu/packages/mate.scm (mate-desktop)[native-inputs]: Uncomment
'gtk-doc' as input.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2017-09-03 16:18:15 +03:00
ng0 60692df286
gnu: mate-themes: Update to 3.22.13.
* gnu/packages/mate.scm (mate-themes): Update to 3.22.13.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2017-09-03 16:18:14 +03:00
ng0 68d2eea0b8
gnu: mate-themes: Update inputs.
* gnu/packages/mate.scm (mate-themes)[inputs]: Remove gtk+, gtk-engines,
murrine. Move gdk-pixbuf ...
[native-inputs]: ... to here. Add gtk+@2.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2017-09-03 16:18:11 +03:00
ng0 4915c51986
gnu: mate-icon-theme: Remove 'gtk+' from native-inputs.
* gnu/packages/mate.scm (mate-icon-theme)[native-inputs]: Remove 'gtk+'.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2017-09-03 16:18:08 +03:00
ng0 833b7e0af0
gnu: mate: Use https.
* gnu/packages/mate.scm (mate-icon-theme)[source, home-page]: Use https.
(mate-themes)[source, home-page]: Likewise.
(mate-desktop)[source, home-page]: Likewise.
(libmateweather)[source, home-page]: Likewise.
(mate-menus)[source, home-page]: Likewise.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2017-09-03 16:18:04 +03:00
Mark H Weaver 3c7c916161
gnu: icecat: Update to 52.3.0-gnu1 and add more upstream fixes.
* gnu/packages/gnuzilla.scm (icecat): Update to 52.3.0-gnu1.
[source]: Remove outdated patches and add more selected fixes from
upstream mozilla-esr52.
2017-09-02 19:50:58 -04:00
Ludovic Courtès 4110fbc6dd
services: '%desktop-services' uses NetworkManager instead of Wicd.
Discussed at
<https://lists.gnu.org/archive/html/guix-devel/2017-08/msg00277.html>.

* gnu/services/desktop.scm (%desktop-services): Remove call to
'wicd-service'.  Add instances of NETWORK-MANAGER-SERVICE-TYPE and
WPA-SUPPLICANT-SERVICE-TYPE.
* doc/guix.texi (Networking Services): Document
'network-manager-service-type' as being part of '%desktop-services'.
(Desktop Services): Replace Wicd with NM.
2017-09-03 00:52:17 +02:00
Mark H Weaver 9a37764014
gnu: linux-libre@4.9: Update to 4.9.47.
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.47.
2017-09-02 17:46:22 -04:00
Mark H Weaver 3e51cd8c76
gnu: linux-libre@4.4: Update to 4.4.86.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.86.
2017-09-02 17:45:37 -04:00
Jelle Licht 448339709d
gnu: node: Update to 8.4.0.
* gnu/packages/patches/node-9077.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/node.scm (node): Update to 8.4.0.
(node)[arguments]: Removed broken linter test. Removed dns test.
2017-09-02 22:59:18 +02:00
ng0 4da9beab14
gnu: Add emacs-base16-theme.
* gnu/packages/emacs.scm (emacs-base16-theme): New variable.

Signed-off-by: Alex Kost <alezost@gmail.com>
2017-09-02 22:40:58 +03:00
Oleg Pykhalov eaf4ba6ef3
gnu: Add emacs-browse-at-remote.
* gnu/packages/emacs.scm (emacs-browse-at-remote): New variable.

Signed-off-by: Alex Kost <alezost@gmail.com>
2017-09-02 22:40:58 +03:00
Alex Kost 780162c797
gnu: emacs-guix: Update to 0.3.3.
* gnu/packages/emacs.scm (emacs-guix): Update to 0.3.3.
2017-09-02 22:40:58 +03:00
Andreas Enge c64692a72d
gnu: pari-gp: Update to 2.9.3.
* gnu/packages/algebra.scm (pari-gp): Update to 2.9.3.
2017-09-02 17:11:49 +02:00
Leo Famulari 7bac819614
gnu: rosegarden: Import bash and lirc modules.
This is a followup to commit 9bc38f2872.

* gnu/packages/music.scm (define-module): Import (gnu packages bash) and
(gnu packages lirc).
2017-09-02 11:07:57 -04:00
Leo Famulari 631c9f743f
gnu: net-tools: Build from a source archive instead of a Git checkout.
* gnu/packages/linux.scm (net-tools)[source]: Use url-fetch and adjust
the source URL accordingly.
[native-inputs]: Add UNZIP.
(net-tools-for-tests)[native-inputs]: Add field so that we can exclude UNZIP.
2017-09-02 11:07:56 -04:00
Kei Kebreau d536113df0
gnu: openjpeg: Fix CVE-2017-{14040,14041}.
* gnu/packages/image.scm (openjpeg)[source]: Add patches.
* gnu/packages/patches/openjpeg-CVE-2017-14040.patch,
gnu/packages/patches/openjpeg-CVE-2017-14041.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
2017-09-02 10:21:03 -04:00
宋文武 65e4109cdc
gnu: emacs-cider: Update to 0.15.0.
* gnu/packages/emacs.scm (emacs-cider): Update to 0.15.0.
2017-09-02 21:23:34 +08:00
Danny Milosavljevic 9bc38f2872
gnu: Add rosegarden.
* gnu/packages/music.scm (rosegarden): New variable.
2017-09-02 14:29:11 +02:00
Hartmut Goebel 7ae9542bf3
gnu: Add prison.
* gnu/packages/kde-frameworks.scm (prison): New variable.
2017-09-02 13:11:31 +02:00
Hartmut Goebel 7ade80220b
gnu: Add libdmtx.
* gnu/packages/aidc.scm (libdmtx): New variable.
2017-09-02 13:11:30 +02:00
Marius Bakke 3fe666aa29
gnu: perl-www-opensearch: Enable tests.
Fixes <https://bugs.gnu.org/28253>.

* gnu/packages/web.scm (perl-www-opensearch)[native-inputs]: Add
PERL-CLASS-ERRORHANDLER, PERL-DATETIME, PERL-DATETIME-FORMAT-MAIL,
PERL-DATETIME-FORMAT-W3CDTF, PERL-FEED-FIND, PERL-MODULE-PLUGGABLE,
PERL-URI-FETCH, PERL-TEST-SIMPLE, PERL-XML-ATOM and PERL-XML-RSS.
2017-09-02 12:32:51 +02:00
Marius Bakke 47111bb365
gnu: ffmpeg@2.8: Update to 2.8.13.
* gnu/packages/video.scm (ffmpeg-2.8): Update to 2.8.13.
2017-09-02 12:08:54 +02:00
Maxim Cournoyer f306825da8
gnu: exiv2: Update source checksum.
The source archive was updated in place; only a cleanup of non functional
files was done (see: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=28326).

* gnu/packages/image.scm (exiv2)[source]: Update hash.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-09-02 10:40:42 +02:00
Ethan R. Jones 7bd65a6304
gnu: swish-e: Work around compilation error and test failures.
* gnu/packages/search.scm (swish-e)[inputs]: Remove ZLIB and LIBXML2.
[arguments]: Add #:configure-flags.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2017-09-02 00:58:11 +02:00
Muriithi Frederick Muriuki 2038a48f4d
gnu: Add python-xenon.
* gnu/packages/python.scm (python-xenon, python2-xenon) New variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-09-02 00:58:11 +02:00
Tobias Geerinckx-Rice 6106d195a2
gnu: perl-html-tree: Update to 5.07.
* gnu/packages/web.scm (perl-html-tree): Update to 5.07.
2017-09-01 23:52:19 +02:00
Tobias Geerinckx-Rice 33fd32c285
gnu: youtube-dl: Update to 2017.09.02.
* gnu/packages/video.scm (youtube-dl): Update to 2017.09.02.
2017-09-01 23:52:19 +02:00
Tobias Geerinckx-Rice bbfc523d95
gnu: dub: Update to 1.5.0.
* gnu/packages/ldc.scm (dub): Update to 1.5.0.
2017-09-01 23:52:19 +02:00
Tobias Geerinckx-Rice def056d138
gnu: perl-context-preserve: Update source URL.
* gnu/packages/perl.scm (perl-context-preserve)[source]: Update CPAN author.
2017-09-01 23:52:18 +02:00
Tobias Geerinckx-Rice 0c3a1674e4
gnu: python-ruamel.yaml: Update to 0.15.33.
* gnu/packages/serialization.scm (python-ruamel.yaml): Update to 0.15.33.
2017-09-01 23:52:18 +02:00
Tobias Geerinckx-Rice d5909be93b
gnu: gparted: Update home page.
* gnu/packages/disk.scm (gparted)[home-page]: Use now-HTTPS gparted.org.
2017-09-01 23:52:18 +02:00
Ricardo Wurmus ebbb6301a3
gnu: r-minimal: Update to 3.4.1.
* gnu/packages/statistics.scm (r-minimal): Update to 3.4.1.
2017-09-01 22:05:39 +02:00
Leo Famulari 3bf0245bb8
gnu: vdirsyncer: Update to 0.16.2.
* gnu/packages/dav.scm (vdirsyncer): Update to 0.16.2.
2017-09-01 13:54:23 -04:00
Leo Famulari 3a91ac8378
gnu: python-click-log: Update to 0.2.0.
* gnu/packages/python.scm (python-click-log): Update to 0.2.0.
2017-09-01 13:54:23 -04:00
Leo Famulari 19ecdbedd3
gnu: python-click-threading: Update to 0.4.3.
* gnu/packages/python.scm (python-click-threading): Update to 0.4.3.
[source]: Use pypi-uri.
2017-09-01 13:54:20 -04:00
Leo Famulari 2da21e48a8
gnu: python-icalendar: Update to 3.11.7.
* gnu/packages/python.scm (python-icalendar): Update to 3.11.7.
2017-09-01 13:41:39 -04:00
Ricardo Wurmus 81195d139f
gnu: r-genomicalignments: Update to 1.12.2.
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.12.2.
2017-09-01 15:11:58 +02:00
Ricardo Wurmus 89b620e7ee
gnu: r-tidyr: Update to 0.7.0.
* gnu/packages/statistics.scm (r-tidyr): Update to 0.7.0.
[propagated-inputs]: Remove r-lazyeval; add r-glue, r-purrr, r-rlang, and
r-tidyselect.
2017-09-01 15:11:58 +02:00
Ricardo Wurmus c4a4ef39ed
gnu: Add r-tidyselect.
* gnu/packages/statistics.scm (r-tidyselect): New variable.
2017-09-01 15:11:58 +02:00
Ricardo Wurmus db2e43863c
gnu: r-vegan: Update to 2.4-4.
* gnu/packages/bioinformatics.scm (r-vegan): Update to 2.4-4.
[native-inputs]: Remove r-knitr.
2017-09-01 15:11:57 +02:00
Ricardo Wurmus 7b92acdf52
gnu: r-maldiquant: Update to 1.16.4.
* gnu/packages/bioinformatics.scm (r-maldiquant): Update to 1.16.4.
2017-09-01 15:11:57 +02:00
Ricardo Wurmus 6bd27981f6
gnu: r-bookdown: Update to 0.5.
* gnu/packages/bioinformatics.scm (r-bookdown): Update to 0.5.
2017-09-01 15:11:56 +02:00
Ricardo Wurmus c62276b2fa
gnu: r-ksamples: Update to 1.2-7.
* gnu/packages/cran.scm (r-ksamples): Update to 1.2-7.
2017-09-01 15:11:56 +02:00
Ricardo Wurmus 28f2f89391
gnu: r-distillery: Update to 1.0-4.
* gnu/packages/cran.scm (r-distillery): Update to 1.0-4.
2017-09-01 15:11:55 +02:00
Ricardo Wurmus f7b172187a
gnu: r-sp: Update to 1.2-5.
* gnu/packages/cran.scm (r-sp): Update to 1.2-5.
2017-09-01 15:11:55 +02:00
Ricardo Wurmus bf958fcd63
gnu: r-ggally: Update to 1.3.2.
* gnu/packages/cran.scm (r-ggally): Update to 1.3.2.
2017-09-01 15:11:55 +02:00
Ricardo Wurmus 38ea6cfab4
gnu: r-reshape: Update to 0.8.7.
* gnu/packages/cran.scm (r-reshape): Update to 0.8.7.
2017-09-01 15:11:54 +02:00
Ricardo Wurmus eeb5432802
gnu: r-powerlaw: Update to 0.70.1.
* gnu/packages/cran.scm (r-powerlaw): Update to 0.70.1.
2017-09-01 15:11:54 +02:00
Ricardo Wurmus a5c2980486
gnu: r-circlize: Update to 0.4.1.
* gnu/packages/cran.scm (r-circlize): Update to 0.4.1.
2017-09-01 15:11:54 +02:00
Ricardo Wurmus ea4d4f7616
gnu: r-shape: Update to 1.4.3.
* gnu/packages/cran.scm (r-shape): Update to 1.4.3.
2017-09-01 15:11:53 +02:00
Ricardo Wurmus 9077f6d9aa
gnu: r-tclust: Update to 1.3-1.
* gnu/packages/statistics.scm (r-tclust): Update to 1.3-1.
2017-09-01 15:11:53 +02:00
Ricardo Wurmus 347cab66b6
gnu: r-fastcluster: Update to 1.1.24.
* gnu/packages/statistics.scm (r-fastcluster): Update to 1.1.24.
2017-09-01 15:11:52 +02:00
Ricardo Wurmus d574d6bcc2
gnu: r-rcpparmadillo: Update to 0.7.960.1.2.
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.960.1.2.
2017-09-01 15:11:52 +02:00
Ricardo Wurmus 2dda8fca6f
gnu: r-plotrix: Update to 3.6-6.
* gnu/packages/statistics.scm (r-plotrix): Update to 3.6-6.
2017-09-01 15:11:51 +02:00
Ricardo Wurmus 7d60652ebe
gnu: r-httr: Update to 1.3.1.
* gnu/packages/statistics.scm (r-httr): Update to 1.3.1.
[propagated-inputs]: Remove r-digest and r-stringr.
2017-09-01 15:11:51 +02:00
Ricardo Wurmus e3323e0707
gnu: r-commonmark: Update to 1.4.
* gnu/packages/statistics.scm (r-commonmark): Update to 1.4.
2017-09-01 15:11:51 +02:00
Ricardo Wurmus 5d84369bda
gnu: r-ade4: Update to 1.7-8.
* gnu/packages/statistics.scm (r-ade4): Update to 1.7-8.
2017-09-01 15:11:50 +02:00
Ricardo Wurmus fb10c923b3
gnu: r-tibble: Update to 1.3.4.
* gnu/packages/statistics.scm (r-tibble): Update to 1.3.4.
2017-09-01 15:11:50 +02:00
Ricardo Wurmus edd5fd7208
gnu: r-rlang: Update to 0.1.2.
* gnu/packages/statistics.scm (r-rlang): Update to 0.1.2.
2017-09-01 15:11:49 +02:00
Ricardo Wurmus 5a00ef0950
gnu: r-knitr: Update to 1.17.
* gnu/packages/statistics.scm (r-knitr): Update to 1.17.
2017-09-01 15:11:49 +02:00
Ricardo Wurmus 3949aef601
gnu: r-bh: Update to 1.65.0-1.
* gnu/packages/statistics.scm (r-bh): Update to 1.65.0-1.
2017-09-01 15:11:49 +02:00
Ricardo Wurmus b93881b9c5
gnu: r-scales: Update to 0.5.0.
* gnu/packages/statistics.scm (r-scales): Update to 0.5.0.
[propagated-inputs]: Add r-r6 and r-viridislite.
2017-09-01 15:11:48 +02:00
Ricardo Wurmus 2d99a31607
gnu: r-mgcv: Update to 1.8-19.
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-19.
2017-09-01 15:11:48 +02:00
Ricardo Wurmus fefe9f4753
gnu: r-matrix: Update to 1.2-11.
* gnu/packages/statistics.scm (r-matrix): Update to 1.2-11.
2017-09-01 15:11:48 +02:00
Ricardo Wurmus 3c2a5bf299
gnu: r-servr: Update to 0.7.
* gnu/packages/web.scm (r-servr): Update to 0.7.
2017-09-01 15:11:47 +02:00
Julien Lepiller 1cf306639c
gnu: php: Update to 7.1.9.
* gnu/packages/php.scm (php): Update to 7.1.9.
2017-09-01 14:17:46 +02:00
Julien Lepiller dcf7a8a660
gnu: java-slf4j-api: Fix tests.
* gnu/packages/java.scm (java-slf4j-api)[arguments]: Enable tests
Adjust the jar content to prevent a test failure.
2017-09-01 14:17:24 +02:00
Z. Ren 5fe2a139df
gnu: djvulibre: Remove timestamps from .svgz files.
* gnu/packages/djvu.scm (djvulibre)[arguments]: New field.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-09-01 11:05:32 +02:00
Oleg Pykhalov 833ade67f1
gnu: Add emacs-tuareg.
* gnu/packages/ocaml.scm (emacs-tuareg): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-09-01 10:39:55 +02:00
ng0 4735393a76
gnu: emacs-ebuild-mode: Update to 1.37.
* gnu/packages/emacs.scm (emacs-ebuild-mode): Update to 1.37.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-09-01 10:34:50 +02:00
ng0 ab966b8f61
gnu: Add emacs-2048-game.
* gnu/packages/emacs.scm (emacs-2048-game): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-09-01 10:34:36 +02:00
Ludovic Courtès 5c5ae46c00
packages: 'fold-packages' takes an optional 'modules' parameter.
Suggested by Christopher Baines <mail@cbaines.net>.

* gnu/packages.scm (fold-packages): Add optional 'modules' parameter and
honor it.
2017-09-01 10:29:39 +02:00
Ricardo Wurmus 75690c9f6b
gnu: r-rcas: Correct license.
* gnu/packages/bioinformatics.scm (r-rcas)[license]: Use correct license.
2017-09-01 10:26:31 +02:00
Ricardo Wurmus eda8f36cd6
gnu: r-rcas: Update to 1.3.3.
* gnu/packages/bioinformatics.scm (r-rcas): Update to 1.3.3.
2017-09-01 10:26:30 +02:00
Efraim Flashner 7d099cbe13
gnu: mysql: Enable tests on aarch64.
* gnu/packages/databases.scm (mysql)[arguments]: Remove logic disabling
the tests on aarch64-linux.
2017-09-01 10:50:39 +03:00
Ben Woodcroft f4bf420c84
gnu: vsearch: Update to 2.4.4.
* gnu/packages/bioinformatics.scm (vsearch): Update to 2.4.4.
2017-09-01 14:45:57 +08:00
Ben Woodcroft 25bd1fc1c1
gnu: metabat: Update to 2.12.1.
* gnu/packages/patches/metabat-remove-compilation-date.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/bioinformatics.scm (metabat): Update to 2.12.1.
[source]: Remove it.  Use url-fetch.
2017-09-01 14:45:57 +08:00
Thomas Danckaert 43d01672a1
gnu: netcdf: Fix reproducibility issue; remove unneeded references.
* gnu/packages/maths.scm (netcdf) [arguments]: Add phase to fix the embedded
  'Configured On' date; truncate reference to compiler store item.
2017-09-01 08:34:32 +02:00
Thomas Danckaert e464b4550e
gnu: hdf4: Avoid unneeded store references to compilers.
* gnu/packages/maths.scm (hdf4) [arguments]: Add phase 'patch-settings to
  truncate hashes of compiler store items.
2017-09-01 08:34:32 +02:00
Thomas Danckaert fd0378a147
gnu: hdf5: Avoid unneeded store references to compilers.
* gnu/packages/maths.scm (hdf5) [arguments]: Add phase to patch
  "libhdf5.settings", removing references to the C/C++/Fortran compilers.
2017-09-01 08:34:31 +02:00
Thomas Danckaert e3a1a1deda
gnu: hdf5: Add output for fortran interface.
* gnu/packages/maths.scm (hdf5) [native-inputs]: Add gfortran.
  [outputs]: Add "fortran".
  [arguments]: Enable Fortran compilation; add "/lib" directory of the fortran
  output to the runpath of the Fortran libs; add a 'split phase to move
  all Fortran-related files to the the Fortran output store location.
2017-09-01 08:34:24 +02:00
Arun Isaac a0596a2f27
gnu: python2-larch: Enable tests.
* gnu/packages/patches/python2-larch-coverage-4.0a6-compatibility.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python2-larch)[source]: Use it.
[arguments]: Move 'check' phase to before 'build' phase.
2017-09-01 11:14:16 +05:30
Arun Isaac f618086220
gnu: python2-ttystatus: Enable tests.
* gnu/packages/python.scm (python2-ttystatus)[arguments]: Replace 'check'
phase with custom function.
2017-09-01 11:14:16 +05:30
Arun Isaac 689042e526
gnu: python2-cliapp: Enable tests.
* gnu/packages/python.scm (python2-cliapp)[arguments]: Replace 'check' phase
with custom function.
2017-09-01 11:14:16 +05:30
Mark H Weaver fe36ecf5c8
gnu: linux-libre: Update to 4.12.10.
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.12.10.
(%linux-libre-hash): Update hash.
2017-09-01 00:31:55 -04:00
Mark H Weaver 2131663a76
gnu: linux-libre@4.9: Update to 4.9.46.
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.46.
2017-09-01 00:31:16 -04:00
Mark H Weaver d215e41a26
gnu: linux-libre@4.4: Update to 4.4.85.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.85.
2017-09-01 00:30:17 -04:00
Marius Bakke 1b3f5fc387
gnu: libxml2/fixed: Use patches from inherited package.
This is a followup to 76fed2b3c4.

* gnu/packages/xml.scm (libxml2/fixed)(patches): Inherit patches from LIBXML2.
2017-08-31 23:43:55 +02:00
Efraim Flashner 0ff44ba464
gnu: graphicsmagick: Fix CVE-2017-{13775,13776,13777}.
* gnu/packages/imagemagick.scm (graphicsmagick)[source]: Add patches.
* gnu/packages/patches/graphicsmagick-CVE-2017-13775.patch,
gnu/packages/patches/graphicsmagick-CVE-2017-13776+CVE-2017-13777.patch:
New files.
* gnu/local.mk (dist_patch_DATA): Register them.
2017-09-01 00:02:27 +03:00
Efraim Flashner d36212e94d
gnu: efl: Update to 1.20.3.
* gnu/packages/enlightenment.scm (efl): Update to 1.20.3.
2017-09-01 00:02:25 +03:00
Christopher Baines a9d5e4bed1
gnu: Fix current-guix.
Without this change, I get errors like:
  ERROR: In procedure string-drop:
  ERROR: Value out of range 0 to 35: 51

* gnu/packages/package-management.scm (current-guix): Pass exactly the same
  path to git-predicate and local-file, to ensure that the select? function is
  compatible.
2017-08-31 21:48:05 +01:00
Marius Bakke fa9f5222a9
gnu: sddm: Update to 0.15.0.
* gnu/packages/display-managers.scm (sddm): Update to 0.15.0.
[source]: Update tarball name.
[inputs]: Add ELOGIND.
[arguments]: Adjust #:configure-flags for elogind support. Add phase to
patch hard-coded loginctl reference.
2017-08-31 22:35:54 +02:00
Alex Vong 76fed2b3c4
gnu: libxml2: Fix CVE-2017-{0663,7375,7376,9047,9048,9049,9050}.
* gnu/packages/patches/libxml2-CVE-2017-0663.patch,
gnu/packages/patches/libxml2-CVE-2017-7375.patch,
gnu/packages/patches/libxml2-CVE-2017-7376.patch,
gnu/packages/patches/libxml2-CVE-2017-9047+CVE-2017-9048.patch,
gnu/packages/patches/libxml2-CVE-2017-9049+CVE-2017-9050.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/xml.scm (libxml2)[replacement]: New field.
(libxml2/fixed): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-08-31 21:45:36 +02:00
Marius Bakke ff54f194f3
gnu: postgresql: Update to 9.6.5.
* gnu/packages/databases.scm (postgresql): Update to 9.6.5.

Release-notes: https://www.postgresql.org/docs/9.6/static/release-9-6-5.html
2017-08-31 21:34:20 +02:00
Ricardo Wurmus 59ff96aafd
gnu: Remove python2-rpy2.
Python 2 is no longer supported.

* gnu/packages/python.scm (python2-rpy2): Remove variable.
2017-08-31 18:24:52 +02:00
Ricardo Wurmus deee5ddaf4
gnu: python-rpy2: Update to 2.9.0.
* gnu/packages/python.scm (python-rpy2): Update to 2.9.0.
[arguments]: Run tests before install phase; add build phase "fix-tests".
[propagated-inputs]: Add python-jinja2 and python-pytz.
[inputs]: Add r-ggplot2, r-rsqlite, r-dplyr, r-dbplyr, and python-numpy.
2017-08-31 18:24:51 +02:00
Ricardo Wurmus c92483bd63
gnu: python-rpy2: Update license.
* gnu/packages/python.scm (python-rpy2)[license]: Correct GPLv3+ to GPLv2+;
list additional licenses.
2017-08-31 18:24:51 +02:00
Ricardo Wurmus caa4e796e4
gnu: Add r-dbplyr.
* gnu/packages/statistics.scm (r-dbplyr): New variable.
2017-08-31 18:24:51 +02:00
Kei Kebreau 4eebfefe7e
gnu: retux: Update to 1.3.5.
* gnu/packages/games.scm (retux): Update to 1.3.5.
2017-08-31 11:38:00 -04:00
Kei Kebreau 95c1324adc
gnu: python-tmx: Update to 1.10.
* gnu/packages/game-development.scm (python-tmx): Update to 1.10.
2017-08-31 11:38:00 -04:00
Kei Kebreau b1d1a10c7c
gnu: python-sge-pygame: Update to 1.5.1.
* gnu/packages/game-development.scm (python-sge-pygame,
python2-sge-pygame): Update to 1.5.1.
2017-08-31 11:37:59 -04:00
Marius Bakke 7e31427ff0
gnu: python-pyjwt: Update to 1.5.2 [fixes CVE-2017-11424].
* gnu/packages/python.scm (python-pyjwt): Update to 1.5.2.
[source]: Add snippet to remove pre-compiled files.
[native-inputs]: Change PYTHON-PYTEST to PYTHON-PYTEST-3.0.
2017-08-31 15:45:43 +02:00
Peter Mikkelsen 5883bb76f8
gnu: Add emacs-idris-mode.
* gnu/packages/emacs.scm (emacs-idris-mode): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-08-31 14:58:34 +02:00
Peter Mikkelsen b9dcaced16
gnu: Add emacs-prop-menu.
* gnu/packages/emacs.scm (emacs-prop-menu): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-08-31 14:57:53 +02:00
Peter Mikkelsen b6dc69af1d
services: mpd: Remove the mpd-file field.
Since MPD switches user, the pid-file must be in a writable dir.  This
is now always /var/run/mpd/(user)/pid.

* gnu/services/audio.scm (mpd-service-type): Add a activation-service
extension.
(<mpd-configuration>)[pid-file]: Remove.
(mpd-service): Rename to...
(mpd-shepherd-service): ... this.
(mpd-file-name, mpd-service-activation): New procedure.
* doc/guix.texi (Audio Services): Document the changes.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-08-31 14:43:26 +02:00
Tobias Geerinckx-Rice 79ada57ba9
gnu: knot: Update to 2.5.4.
* gnu/packages/dns.scm (knot): Update to 2.5.4.
2017-08-31 13:53:04 +02:00
Paul Garlick 1c25a52c4a
gnu: Add pt-scotch32.
* gnu/packages/maths.scm (pt-scotch32): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-08-31 12:34:50 +02:00
Paul Garlick 1c39f3b877
gnu: Add "scotch32".
* gnu/packages/maths.scm (scotch32): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-08-31 12:34:50 +02:00
Ben Woodcroft 0691851a64
gnu: bioinformatics: Work around more "dotless @INC" build failures.
* gnu/packages/bioinformatics.scm (ncbi-vdb, sra-tools)[arguments]: Add
'set-perl-search-path' phase.
2017-08-31 12:37:05 +08:00
Ben Woodcroft c959e5a1dc
gnu: ruby-2.2.7: Fix CVE-2017-{0899,0900,0901,0902}.
* gnu/packages/patches/ruby-2.2.7-rubygems-2613-ruby22.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/ruby.scm (ruby-2.2.7)[source]: Use it.
2017-08-31 10:43:19 +08:00
Ben Woodcroft db542518b3
gnu: ruby-2.3.4: Fix CVE-2017-{0899,0900,0901,0902}.
* gnu/packages/patches/ruby-2.3.4-rubygems-2613-ruby23.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/ruby.scm (ruby-2.3.4)[source]: Use it.
2017-08-31 10:43:19 +08:00
Ben Woodcroft 9770cbf9e2
gnu: ruby-2.4.1: Fix CVE-2017-{0899,0900,0901,0902}.
* gnu/packages/patches/ruby-rubygems-2612-ruby24.patch,
gnu/packages/patches/ruby-rubygems-2613-ruby24.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/ruby.scm (ruby-2.4.1)[source]: Use them.
2017-08-31 10:43:19 +08:00
Ben Woodcroft 690a904ad7
gnu: metabat: Update to 2.11.3.
* gnu/packages/bioinformatics.scm (metabat): Update to 2.11.3.
[source]: Use git-fetch.  Remove boost-related patch.
* gnu/packages/patches/metabat-fix-boost-issue.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-08-31 10:43:18 +08:00
Marius Bakke 2d2e97bd71
gnu: vlc: Fix build and clean up expression.
Commit 3e0c54bf4d touches 'configure.ac' which
in turn regenerates 'po/Makefile.in.in' with the wrong SHELL and breaks
install.  While at it, consolidate the other patching phases and remove
unneeded inputs.

* gnu/packages/video.scm (vlc)[arguments]: Consolidate patching phases into a
'patch-source' phase and run it immediately after unpack.
[native-inputs]: Remove AUTOCONF, AUTOMAKE and LIBTOOL.
2017-08-31 03:43:54 +02:00
Marius Bakke 3e0c54bf4d
gnu: vlc: Recover lost phase.
This is a followup to eb1f2420d5.

* gnu/packages/video.scm (vlc)[arguments]: Run the fix-livemedia-utils-prefix
phase before configure.
2017-08-31 03:05:24 +02:00
Marius Bakke 4f68156140
gnu: gd: Replace with 2.2.5.
Fixes CVE-2017-6362 and CVE-2017-7890.

* gnu/packages/gd.scm (gd)[replacement]: New field.
(gd-2.2.5): New variable.
* gnu/packages/php.scm (gd-for-php): Remove variable
(php)[inputs]: Replace GD-FOR-PHP with GD-2.2.5.
* gnu/packages/patches/gd-CVE-2017-7890.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-08-31 02:49:43 +02:00
Tobias Geerinckx-Rice cad88b8533
gnu: claws-mail: Update to 3.15.1.
* gnu/packages/mail.scm (claws-mail): Update to 3.15.1.
2017-08-31 00:57:46 +02:00
Ludovic Courtès 9ff7161a06
gnu: Add texlive-latex-acmart.
* gnu/packages/tex.scm (texlive-latex-acmart): New variable.
2017-08-31 00:03:20 +02:00
Marius Bakke 9749746544
gnu: mbedtls-apache: Update to 2.6.0 [fixes CVE-2017-14032].
* gnu/packages/tls.scm (mbedtls-apache): Update to 2.6.0.
2017-08-30 22:41:40 +02:00
Marius Bakke eb1f2420d5
gnu: vlc: Remove obsolete test workaround.
* gnu/packages/video.scm (vlc)[arguments]: Drop ac_cv_c_fast_math from
  #:configure-flags.  Remove related 'bootstrap' phase.
2017-08-30 22:35:45 +02:00
Marius Bakke 552c3e95f3
gnu: vlc: Build with modular qt.
* gnu/packages/video.scm (vlc)[inputs]: Remove QT.  Add QTBASE and QTX11EXTRAS.
[arguments]: Add CXXFLAGS=-std=gnu++11 to #:configure-flags.  Add
'fix-qt-include' phase.
2017-08-30 22:22:51 +02:00
Marius Bakke 2de7d137b3
gnu: qemu: Update to 2.10.0.
* gnu/packages/patches/qemu-CVE-2017-10664.patch,
gnu/packages/patches/qemu-CVE-2017-10806.patch,
gnu/packages/patches/qemu-CVE-2017-10911.patch,
gnu/packages/patches/qemu-CVE-2017-11334.patch,
gnu/packages/patches/qemu-CVE-2017-11434.patch,
gnu/packages/patches/qemu-CVE-2017-12809.patch:
gnu/packages/patches/qemu-CVE-2017-7493.patch,
gnu/packages/patches/qemu-CVE-2017-8112.patch,
gnu/packages/patches/qemu-CVE-2017-8309.patch,
gnu/packages/patches/qemu-CVE-2017-8379.patch,
gnu/packages/patches/qemu-CVE-2017-8380.patch,
gnu/packages/patches/qemu-CVE-2017-9524.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/virtualization.scm (qemu): Update to 2.10.0.
[source](patches): Remove.
2017-08-30 20:50:13 +02:00
Marius Bakke ffeeda6bab
gnu: jsoncpp: Update to 1.8.2.
* gnu/packages/serialization.scm (jsoncpp): Update to 1.8.2.
2017-08-30 20:36:40 +02:00
Ricardo Wurmus 799247d2d9
gnu: multiqc: Update to 1.2.
* gnu/packages/bioinformatics.scm (multiqc): Update to 1.2.
[source]: Remove patches.
[arguments]: Remove to enable tests.
[propagated-inputs]: Add python-spectra, python-requests, python-markdown,
python-lzstring.
* gnu/packages/patches/multiqc-fix-git-subprocess-error.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-08-30 17:32:00 +02:00
Ricardo Wurmus 4a7d2009c8
gnu: Add python-spectra.
* gnu/packages/python.scm (python-spectra, python2-spectra): New variables.
2017-08-30 17:32:00 +02:00
Ricardo Wurmus beed6abc1d
gnu: Add python-colormath.
* gnu/packages/python.scm (python-colormath, python2-colormath): New
variables.
2017-08-30 17:31:59 +02:00
Ricardo Wurmus bac5fd21a1
gnu: python-jinja2: Update to 2.9.6.
* gnu/packages/python.scm (python-jinja2): Update to 2.9.6.
[arguments]: Add build phase "delete-incompatible-files".
2017-08-30 17:31:59 +02:00
Ricardo Wurmus e7c76b0661
gnu: Add python-lzstring.
* gnu/packages/compression.scm (python-lzstring, python2-lzstring): New
variables.
2017-08-30 17:31:59 +02:00
Kei Kebreau b9319c1e22
gnu: hyperrogue: Update to 10.0g.
* gnu/packages/games.scm (hyperrogue): Update to 10.0g.
2017-08-30 07:43:24 -04:00
Arun Isaac a00379e7dc
gnu: Add linkchecker.
* gnu/packages/web.scm (linkchecker): New variable.
2017-08-30 12:53:39 +05:30
Thomas Danckaert c93ffc11d0
gnu: kdevelop: Update to 5.1.2.
* gnu/packages/kde.scm (kdevelop, kdevplatform): Update to 5.1.2.
2017-08-30 09:20:53 +02:00
Thomas Danckaert e0fbf37350
gnu: coda: Update to 2.18.2.
* gnu/packages/maths.scm (coda): Update to 2.18.2.
2017-08-30 09:20:52 +02:00
Stefan Reichör f3f82d1d1f
gnu: Add fzy.
* gnu/packages/shellutils.scm (fzy): New variable.
2017-08-30 09:20:52 +02:00
Rutger Helling 9dd14f1e08
gnu: wine: Update to 2.0.2.
* gnu/packages/wine.scm (wine): Update to 2.0.2.
2017-08-30 09:20:52 +02:00
Carlo Zancanaro 13035eb2de
gnu: electrum: Update to 2.9.3.
* gnu/packages/finance.scm (electrum): Update to 2.9.3.
[inputs]: Add python2-pyaes, python2-pysocks. Remove python2-slowaes.
2017-08-30 09:20:52 +02:00
Carlo Zancanaro 7a276cd945
gnu: Add python-pyaes.
* gnu/packages/python.scm (python-pyaes, python2-pyaes): New variables.
2017-08-30 09:20:52 +02:00
Carlo Zancanaro 07e62ae1c2
gnu: Add python-pysocks.
* gnu/packages/python.scm (python-pysocks, python2-pysocks): New variables.
2017-08-30 09:20:45 +02:00
Tobias Geerinckx-Rice b85a66b4d5
gnu: dtach: Install man page.
* gnu/packages/screen.scm (dtach)[arguments]: Install the dtach(1) man page.
2017-08-30 04:45:43 +02:00
Tobias Geerinckx-Rice 249ab8cc3e
gnu: nginx: Install man page.
* gnu/packages/web.scm (nginx)[arguments]: Install the nginx(8) man page,
and add a comment about the non-GNU configure script.
2017-08-30 03:24:19 +02:00
Kei Kebreau 3c8ba11a97
Update e-mail for Kei Kebreau.
* .mailmap: Map kei@openmailbox.org to current address.
* gnu/local.mk: Replace kei@openmailbox.org to current address.
* gnu/packages/backup.scm: Likewise.
* gnu/packages/calendar.scm: Likewise.
* gnu/packages/check.scm: Likewise.
* gnu/packages/compression.scm: Likewise.
* gnu/packages/documentation.scm: Likewise.
* gnu/packages/emacs.scm: Likewise.
* gnu/packages/fltk.scm: Likewise.
* gnu/packages/freedesktop.scm: Likewise.
* gnu/packages/game-development.scm: Likewise.
* gnu/packages/games.scm: Likewise.
* gnu/packages/gnome.scm: Likewise.
* gnu/packages/gnustep.scm: Likewise.
* gnu/packages/gtk.scm: Likewise.
* gnu/packages/hexedit.scm: Likewise.
* gnu/packages/image.scm: Likewise.
* gnu/packages/maths.scm: Likewise.
* gnu/packages/music.scm: Likewise.
* gnu/packages/xfce.scm: Likewise.
* gnu/packages/python.scm: Likewise.
* gnu/packages/tcl.scm: Likewise.
* gnu/packages/textutils.scm: Likewise.
* gnu/packages/video.scm: Likewise.
* gnu/packages/w3m.scm: Likewise.
* gnu/packages/web.scm: Likewise.
* gnu/packages/web-browsers.scm: Likewise.
* gnu/packages/patches/wmfire-update-for-new-gdk-versions.patch: Likewise.
2017-08-29 20:13:24 -04:00
Tobias Geerinckx-Rice b1c699c4c0
gnu: perl-tk: Update to 804.034.
* gnu/packages/tcl.scm (perl-tk): Update to 804.034.
2017-08-29 23:40:09 +02:00
Tobias Geerinckx-Rice 77217b4393
gnu: font-mathjax, js-mathjax: Remove hard-coded version.
* gnu/package-s/javascript.scm (font-mathjax, js-mathjax)[arguments]: Re-use
font-mathjax's ‘version’ field instead of duplicating the version number.
2017-08-29 23:40:09 +02:00
Tobias Geerinckx-Rice d6a7268bae
gnu: font-mathjax: Update to 2.7.2.
* gnu/packages/javascript.scm (font-mathjax): Update to 2.7.2.
2017-08-29 23:40:09 +02:00
Tobias Geerinckx-Rice d3f0e09882
gnu: tiled: Update to 1.0.3.
* gnu/packages/game-development.scm (tiled): Update to 1.0.3.
2017-08-29 23:40:08 +02:00
Efraim Flashner 08cba8cca4
gnu: libgcrypt: Fix CVE-2017-0379.
* gnu/packages/gnupg.scm (libgcrypt)[replacement]: New field.
(libgcrypt/fixed): New variable.
2017-08-29 23:32:16 +03:00
R H 0ae32da8d6
gnu: qtox: Update to 1.11.0.
* gnu/packages/messaging.scm (qtox): Update to 1.11.0.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2017-08-30 01:18:50 +05:30
Christopher Baines 02654c47b2
gnu: Escape @ in the perl-importer package description.
@EXPORT is interpreted as a texinfo command, therefore the @ needs
escaping. This was causing a test failure in the guix-package.sh file.

* gnu/packages/perl.scm (perl-importer)[description]: Escape @.
2017-08-29 20:15:46 +01:00
Andy Wingo 69dcad33c8
gnu: emacs-lua-mode: Update to current git.
* gnu/packages/emacs.scm (emacs-lua-mode): Update; fixes a very annoying bug
with syntax highlighting of multi-line strings.
2017-08-29 19:52:16 +02:00
Danny Milosavljevic 84d9abe450
gnu: Add python-pyalsaaudio.
* gnu/packages/audio.scm (python-pyalsaaudio, python2-pyalsaaudio): New
variables.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2017-08-29 20:06:12 +08:00
Efraim Flashner 47deafb81c
gnu: font-gnu-unifont: Update to 10.0.06.
* gnu/packages/fonts.scm (font-gnu-unifont): Update to 10.0.06.
2017-08-29 12:38:12 +03:00
Nicolas Goaziou 8b618c79e0
gnu: emacs-org: Update to 20170828
* gnu/packages/emacs.scm (emacs-org): Update to 20170828 (a.k.a. 9.0.10).
2017-08-28 16:37:12 +02:00
Efraim Flashner 92cc6a5801
gnu: gnupg: Clean up arguments.
* gnu/packages/gnupg.scm (gnupg)[arguments]: Shorten the
'patch-test-paths phase.
2017-08-28 17:25:00 +03:00
Efraim Flashner e184de5748
gnu: gnupg: Update to 2.2.0.
* gnu/packages/gnupg.scm (gnupg): Update to 2.2.0.
[arguments]: Add flag to run more tests.
2017-08-28 17:24:58 +03:00
Ricardo Wurmus 174fbd5f3b
gnu: r-minimal: Remove timestamp from man page.
* gnu/packages/statistics.scm (r-minimal)[arguments]: Adjust
"build-reproducibly" phase to prevent the bundled help2man script from
printing the current month and year.
2017-08-28 15:51:05 +02:00
Efraim Flashner af9bb4cab8
gnu: pspp: Update to 1.0.1.
* gnu/packages/statistics.scm (pspp): Update to 1.0.1.
2017-08-28 14:44:41 +03:00
Efraim Flashner 475b99fa5c
gnu: jemalloc: Update to 5.0.1.
* gnu/packages/jemalloc.scm (jemalloc): Update to 5.0.1.
[inputs]: Add perl.
2017-08-28 11:53:20 +03:00
Ludovic Courtès 7f090203d5
services: user-processes: Reap child processes.
Fixes <http://bugs.gnu.org/26931>.
Reported by Leo Famulari <leo@famulari.name>.

* gnu/services/base.scm (user-processes-service-type)[stop]: Add
'reap-children' loop.
* gnu/tests/base.scm (run-halt-test): New procedure.
(%test-halt): New variable.
2017-08-28 09:56:33 +02:00
Ludovic Courtès 06b8eae3d1
marionette: Augment the set of keystrokes.
* gnu/build/marionette.scm (%qwerty-us-keystrokes): Add ', ", and `.
2017-08-28 09:56:33 +02:00
Ludovic Courtès 0a80981178
marionette: Fix typing of capital letters.
Previously we'd use "sendkey P" instead of "sendkey shift-p", which had
no effect.

* gnu/build/marionette.scm (character->keystroke): New procedure.
(string->keystroke-commands): Use it.
2017-08-28 09:56:33 +02:00
Ludovic Courtès 8bd5231485
marionette: 'wait-for-file' really raises an error when a file is missing.
* gnu/build/marionette.scm (wait-for-file): Arrange to call 'error' on
the host, not in the guest.
2017-08-28 09:56:33 +02:00
Ludovic Courtès a881a40cea
gnu: emacs-nix-mode: Move to package-management.scm.
Reported by Christopher Baines.
This fixes a top-level reference among mutually-dependent modules.

* gnu/packages/emacs.scm (emacs-nix-mode): Move to...
* gnu/packages/package-management.scm (emacs-nix-mode): ... here.
2017-08-28 09:56:33 +02:00
Ludovic Courtès 9e1fe3d0c3
bootloader: Emit warnings with 'warning'.
* gnu/bootloader.scm (bootloader-configuration-target): Use 'warning'
instead of 'issue-deprecation-warning'.
2017-08-28 09:56:33 +02:00
Efraim Flashner 15d61488a6
gnu: xf86-video-freedreno: Add missing input.
* gnu/packages/xorg.scm (xf86-video-freedreno)[inputs]: Add zlib.
2017-08-28 10:14:25 +03:00
Leo Famulari 9baa969758
gnu: libzip: Fix CVE-2017-12858.
* gnu/packages/patches/libzip-CVE-2017-12858.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/compression.scm (libzip)[source]: Use it.
2017-08-27 19:51:45 -04:00
Tobias Geerinckx-Rice 152fc9594e
gnu: srt2vtt: Update source URL.
* gnu/packages/video.scm (srt2vtt)[source]: Fetch sources from new URL.
2017-08-28 01:44:44 +02:00
Leo Famulari 51988e3a03
gnu: Give descriptive file-names for some Git sources.
* gnu/packages/java.scm (classpath-devel)[source]: Set the file-name.
* gnu/packages/guile.scm (guile-for-guile-emacs,
guile-syntax-highlight)[source]: Likewise.
2017-08-27 18:24:50 -04:00
Leo Famulari 5f13bf0972
gnu: Fetch several Git sources over HTTPS.
* gnu/packages/admin.scm (interrobang)[source]: Use HTTPS URL.
* gnu/packages/audio.scm (ardour)[source]: Likewise.
* gnu/packages/embedded.scm (libjaylink, openocd)[source]: Likewise.
* gnu/packages/gnome.scm (byzanz)[source]: Likewise.
* gnu/packages/gnunet.scm (guile-gnunet)[source]Likewise.
* gnu/packages/java.scm (classpath)[source]: Likewise.
* gnu/packages/microcom.scm (microcom)[source]: Likewise.
* gnu/packages/python.scm (python-axolotl-curve25519)[source]: Likewise.
* gnu/packages/rdesktop.scm (freerdp)[source]: Likewise.
* gnu/packages/shells.scm (rc)[source]: Likewise.
* gnu/packages/web.scm (libwebsockets)[source]: Use new source URL.
2017-08-27 18:24:49 -04:00
Tobias Geerinckx-Rice ad539230f1
gnu: youtube-dl: Update to 2017.08.27.1.
* gnu/packages/video.scm (youtube-dl): Update to 2017.08.27.1.
2017-08-27 22:58:19 +02:00
Tobias Geerinckx-Rice c10d502423
gnu: iodine: Fix path to ifconfig.
* gnu/packages/networking.scm (iodine)[arguments]: Fix path to ifconfig.
2017-08-27 22:23:51 +02:00
Leo Famulari 01f248b606
gnu: filezilla: Update to 3.27.1.
* gnu/packages/ftp.scm (filezilla): Update to 3.27.1.
2017-08-27 16:04:31 -04:00
Leo Famulari a9af060e5d
gnu: libfilezilla: Update to 0.10.1.
* gnu/packages/ftp.scm (libfilezilla): Update to 0.10.1.
[native-inputs]: Add pkg-config.
2017-08-27 16:04:30 -04:00
Leo Famulari 1c059a6e16
gnu: wxwidgets: Update to 3.0.3.
* gnu/packages/wxwidgets.scm (wxwidgets): Update to 3.0.3.
[source]: Remove 'wxwidgets-fix-windowGTK.patch'.
* gnu/packages/patches/wxwidgets-fix-windowGTK.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-08-27 16:04:25 -04:00
Andy Wingo 2999dcd5b7
gnu: gnome: Install some GStreamer plugins.
* gnu/packages/gnome.scm (gnome): Add gst-plugins-base and gst-plugins-good.
This will allow stock GNOME installs to play Ogg Vorbis files, among other
things.  It will also ensure that GST_PLUGIN_SYSTEM_PATH is set to a sensible
value when GNOME is installed to the system instead of the user profile.
2017-08-27 20:59:46 +02:00
Andy Wingo 39c853bd61
gnu: totem: Wrap environment for thumbnailer.
* gnu/packages/gnome.scm (totem): Wrap thumbnailer also in environment that
  sets GST_PLUGIN_SYSTEM_PATH.
2017-08-27 20:59:35 +02:00
Efraim Flashner ff16170ab9
gnu: nano: Update to 2.8.7.
* gnu/packages/nano.scm (nano): Update to 2.8.7.
2017-08-27 16:29:37 +03:00
Marius Bakke ebd181138e
gnu: perl: Work around more "dotless @INC" build failures.
* gnu/packages/perl.scm (perl-unicode-collate)[arguments]: Add
'set-perl-search-path' phase.
* gnu/packages/xorg.scm (perl-x11-xcb)[arguments]: Likewise.
2017-08-27 15:07:21 +02:00
Marius Bakke 88d5889c40
gnu: perl-www-opensearch: Provide Module::Install.
* gnu/packages/web.scm (perl-www-opensearch)[native-inputs]: Add PERL-MODULE-INSTALL.
2017-08-27 15:07:21 +02:00
Marius Bakke 522f199562
gnu: perl-xml-atom: Update to 0.42.
* gnu/packages/xml.scm (perl-xml-atom): Update to 0.42.
[arguments]: Add 'set-perl-search-path' phase.
[native-inputs]: Add PERL-HTML-TAGSET and PERL-MODULE-BUILD-TINY.
2017-08-27 15:07:21 +02:00
Marius Bakke 9978567460
gnu: babl: Update to 0.1.30.
* gnu/packages/gimp.scm (babl): Update to 0.1.30.
2017-08-27 15:07:21 +02:00
Marius Bakke b45c050545
gnu: Remove unneeded import.
* gnu/packages/engineering.scm: Don't import (srfi srfi-1) in top scope.
2017-08-27 15:07:21 +02:00
Marius Bakke fab46af832
gnu: tdb: Update to 1.3.15.
* gnu/packages/databases.scm (tdb): Update to 1.3.15.
2017-08-27 15:07:21 +02:00
Efraim Flashner 6909c24093
gnu: enlightenment: Update to 0.21.9.
* gnu/packages/enlightenment.scm (enlightenment): Update to 0.21.9.
2017-08-27 15:53:13 +03:00
Kei Kebreau ab11563797
gnu: xauth: Enable tests.
* gnu/packages/xorg.scm (xauth)[arguments]: Enable tests.
[native-inputs]: Add cmdtest.
2017-08-26 15:40:55 -04:00
Kei Kebreau cd669fdeb1
gnu: Add cmdtest.
* gnu/packages/check.scm (cmdtest): New variable.

Co-authored-by: Arun Isaac <arunisaac@systemreboot.net>
2017-08-26 15:26:45 -04:00
Marius Bakke 72e2815d18
Merge branch 'core-updates' 2017-08-26 15:15:49 +02:00
Andy Wingo c20cd0d24d
gnu: gnome: Depend on xdg-user-dirs.
* gnu/packages/gnome.scm (gnome): Add xdg-user-dirs dependency.  The presence
  of the autostart file in /run/current-system/profile/etc/xdg should cause
  xdg-user-dirs to be run when a user logs in, ensuring that they have
  ~/Pictures and other well-known user directories.
2017-08-26 13:37:30 +02:00
Andy Wingo b9bf08f058
gnu: Add xdg-user-dirs.
* gnu/packages/freedesktop.scm (xdg-user-dirs): New public variable.
2017-08-26 13:37:19 +02:00
Julien Lepiller 446695775d
gnu: Add radare2.
* gnu/packages/engineering.scm (radare2): New variable.
2017-08-26 13:01:36 +02:00
Julien Lepiller f70be0113f
gnu: Add python-capstone.
* gnu/packages/engineering.scm (python-capstone, python2-capstone): New
variables.
2017-08-26 13:01:32 +02:00
Julien Lepiller 6febda9443
gnu: Add capstone.
* gnu/packages/engineering.scm (capstone): New variable.
2017-08-26 13:01:11 +02:00
Oleg Pykhalov d987a006dc
gnu: youtube-dl: Update to 2017.08.23.
* gnu/packages/video.scm (youtube-dl): Update to 2017.08.23.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2017-08-26 13:35:44 +05:30
宋文武 acf7a958a6
gnu: pv: Update to 1.6.6.
* gnu/packages/pv.scm (pv): Update to 1.6.6.
2017-08-26 14:09:05 +08:00
Mark H Weaver 828f0109ee
gnu: linux-libre: Update to 4.12.9.
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.12.9.
(%linux-libre-hash): Update hash.
2017-08-25 23:53:32 -04:00
Mark H Weaver 50e34c608e
gnu: linux-libre@4.9: Update to 4.9.45.
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.45.
2017-08-25 23:52:58 -04:00
Mark H Weaver cd2247cccd
gnu: linux-libre@4.4: Update to 4.4.84.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.84.
2017-08-25 23:52:14 -04:00
Marius Bakke 2f837cf7fe
gnu: perl: Add more missing dependencies on Module::Install.
* gnu/packages/databases.scm (perl-dbix-class, perl-dbix-class-cursor-cached,
  perl-dbix-class-introspectablem2m,
  perl-dbix-class-schema-loader)[native-inputs]: Add PERL-MODULE-INSTALL.
* gnu/packages/web.scm (perl-catalyst-action-renderview,
  perl-catalyst-action-rest, perl-catalyst-authentication-store-dbix-class,
  perl-catalyst-component-instancepercontext, perl-catalyst-model-dbic-schema,
  perl-catalyst-plugin-authentication,
  perl-catalyst-plugin-authorization-roles, perl-catalyst-plugin-configloader,
  perl-catalyst-plugin-session, perl-catalyst-plugin-session-state-cookie,
  perl-catalyst-plugin-stacktrace, perl-catalyst-plugin-static-simple,
  perl-catalyst-traitfor-request-proxybase, perl-catalyst-view-download,
  perl-catalyst-view-json, perl-catalystx-script-server-starman,
  perl-test-www-mechanize, perl-test-www-mechanize-catalyst)[native-inputs]:
  Likewise.
* gnu/packages/xorg.scm (perl-x11-xcb)[native-inputs]: Likewise.
2017-08-25 22:24:10 +02:00
Marius Bakke a21db79e52
gnu: perl-catalyst-runtime: Update to 5.90115.
* gnu/packages/web.scm (perl-catalyst-runtime): Update to 5.90115.
[native-inputs]: Add PERL-MODULE-INSTALL.
2017-08-25 22:23:53 +02:00
Leo Famulari 35131babc1
gnu: go: Update to 1.9.
* gnu/packages/golang.scm (go-1.8): Replace with ...
(go-1.9): ... new variable.
[arguments]: Adjust the pre-build phase accordingly.
2017-08-25 12:28:58 -04:00
Andy Wingo 6e99c01b4d
gnu: Add draft of gdm service.
* gnu/services/xorg.scm (%gdm-accounts, <gdm-configuration>)
(gdm-etc-service, gdm-pam-service, gdm-shepherd-service, gdm-service-programs)
(gdm-service-type, gdm-service): New public variables.  Not yet working.
2017-08-25 16:01:56 +02:00
Andy Wingo b6d8066d4d
gnu: services: Log debug messages to /var/log/debug.
* gnu/services/base.scm (%default-syslog.conf): Create a /var/log/debug with
  messages logged to syslog at debug level.
2017-08-25 16:01:56 +02:00
Andy Wingo e0e6756fbd
gnu: gdm: Fix environment of worker processes and sessions.
* gnu/packages/gnome.scm (gdm): Get X server path from GDM_X_SERVER
environment variable, and make sure this variable is propagated to internal
sub-processes.  Launch sessions with a reasonable XDG_CONFIG_DIRS setting.
Get the custom GDM conf from the current system's profile.
2017-08-25 16:01:56 +02:00
Andy Wingo 957dbc0a4d
gnu: gdm: Use proper elogind check, and wrap environment.
* gnu/packages/gnome.scm (gdm): Use glib-or-gtk-build-system to make sure the
schemas are available to GDM.  Install gdm to /bin to make this happen.  Use a
proper elogind check.
2017-08-25 16:01:56 +02:00
Andy Wingo af37e6bbd4
gnu: gdm: Look for sessions in /run/current-system.
* gnu/packages/gnome.scm (gdm): Fix search paths for system sessions.  Use
  /var as localstatedir.  Set a more sensible default path for user sessions.
2017-08-25 16:01:56 +02:00
Andy Wingo 92753a8bad
gnu: services: Refactor to separate X and startx wrappers.
* gnu/services/xorg.scm (xorg-wrapper): New public function.
(xorg-start-command): Use xorg-wrapper.
2017-08-25 16:01:56 +02:00
Andy Wingo 063c608261
gnu: Add AccountsService service to desktop services.
* doc/guix.texi (Desktop Services): Add accountsservice-service.
* gnu/services/desktop.scm (%accountsservice-activation):
(accountsservice-service-type): New public variables.
(%desktop-services): Add accountsservice-service.
2017-08-25 16:01:56 +02:00
Andy Wingo e76008dbc8
gnu: accountsservice: Properly reference shadow.
* gnu/packages/freedesktop.scm (accountsservice): Fix references to binaries
  provided by the shadow package.
2017-08-25 16:01:45 +02:00
Efraim Flashner cb8b14f182
gnu: parallel: Update to 20170822.
* gnu/packages/parallel.scm (parallel): Update to 20170822.
2017-08-25 09:15:12 +03:00
Mark H Weaver 1934769ba1
gnu: libmikmod: Add fallback source URL, needed for older versions.
* gnu/packages/sdl.scm (libmikmod)[source]: Add a fallback source URL where
older versions are kept.
2017-08-25 02:08:52 -04:00
Ricardo Wurmus 0b4f40e4fa
gnu: yoshimi: Update to 1.5.3.
* gnu/packages/music.scm (yoshimi): Update to 1.5.3.
2017-08-25 04:55:05 +02:00
Ricardo Wurmus 5cff549c60
gnu: zynaddsubfx: Update to 3.0.2.
* gnu/packages/music.scm (zynaddsubfx): Update to 3.0.2.
2017-08-25 04:51:07 +02:00
Ricardo Wurmus 44aca1a3e5
gnu: guile-xcb: Update source URL.
* gnu/packages/guile-wm.scm (guile-xcb)[source]: Use archived tarball URL.
2017-08-25 02:15:14 +02:00
Ludovic Courtès 649c438c23
gnu: font-mathjax: Move to javascript.scm.
This avoids cross-module top-level references.

* gnu/packages/fonts.scm (font-mathjax): Move to...
* gnu/packages/javascript.scm (font-mathjax): ... here.  New variable.
2017-08-24 23:55:51 +02:00
Ludovic Courtès 87f057c46e
gnu: font-go: Remove reference to 'go-1.4'.
This avoids circular references at the top level.

* gnu/packages/fonts.scm (font-go)[license]: Remove reference to
GO-1.4.
2017-08-24 23:55:51 +02:00
Stefan Reichör 84342e2fa9
gnu: Add honcho.
* gnu/packages/python.scm (python-honcho, python2-honcho): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-08-24 21:27:23 +02:00
Marius Bakke a251838d67
gnu: maim: Update to 5.4.68.
* gnu/packages/xdisorg.scm (maim): Update to 5.4.68.
2017-08-24 21:21:04 +02:00
Marius Bakke 8752fa6cba
gnu: slop: Update to 7.3.49.
* gnu/packages/xdisorg.scm (slop): Update to 7.3.49.
2017-08-24 21:21:04 +02:00
Ricardo Wurmus 3f8efbb9a4
gnu: guile-wm: Update source URL.
* gnu/packages/guile-wm.scm (guile-wm)[source]: Use archived URL.
2017-08-24 20:42:45 +02:00
Thomas Danckaert 17e56dac12
gnu: libreoffice: Fix icons, enable liblangtag.
* gnu/packages/libreoffice.scm (libreoffice) [inputs]: Add liblangtag.
  [arguments]: Correct icon names in .desktop files; copy desktop files &
  icons for libreoffice-math and libreoffice-startcenter; enable parallel
  build; enable liblangtag.
2017-08-24 19:52:16 +02:00
Tobias Geerinckx-Rice 5cdb0cd380
gnu: dovecot: Update to 2.2.32.
* gnu/packages/mail.scm (dovecot): Update to 2.2.32.
2017-08-24 16:38:47 +02:00
Efraim Flashner 5fc9b6c108
gnu: lollypop: Use pseudo meson build system.
* gnu/packages/gnome.scm (lollypop)[arguments]: Disable tests. Delete
configure phase, replace build and install phase with custom phases.
[native-inputs]: Add ninja.
[propagated-inputs]: Move gst-plugins-base ...
[inputs]: ... to here. Add meson.
2017-08-24 15:33:13 +03:00
Hartmut Goebel e3c13d044f
gnu: libksysguard: Enable more tests (not all working yet).
* gnu/packages/kde.scm (libksysguard)[arguments]
  <#:phases>'check-setup': Set QT_QPA_PLATFORM=offscreen.
  <#:phases>'check': Enable all tests except of the failing one.
2017-08-24 12:32:34 +02:00
Arun Isaac 2d6da7942a
gnu: python2-ttystatus: Update to 0.35.
* gnu/packages/python.scm (python2-ttystatus): Update to 0.35.
2017-08-24 14:28:41 +05:30
Arun Isaac f6c5821530
gnu: cliapp: Update to 1.20170823.
* gnu/packages/python.scm (python2-cliapp): Update to 1.20170823.
2017-08-24 14:20:45 +05:30
Efraim Flashner c47048c328
gnu: datamash: Update to 1.2.
* gnu/packages/datamash.scm (datamash): Update to 1.2.
2017-08-24 10:35:00 +03:00
Andy Wingo 045ebb3e58
gnu: bootloader: Deprecate "device" field in favor of "target".
* gnu/bootloader.scm (<bootloader-configuration>): Deprecate "device" field in
favor of "target" field.  This is mostly a renaming but also a generalization
to support UEFI targets being paths to a mounted partition instead of a device
name.
* gnu/system/examples/bare-bones.tmpl:
* gnu/system/examples/desktop.tmpl:
* gnu/system/examples/lightweight-desktop.tmpl:
* gnu/system/examples/vm-image.tmpl:
* gnu/system/install.scm:
* gnu/tests.scm:
* gnu/tests/install.scm:
* gnu/tests/nfs.scm:
* tests/system.scm: Adapt all invocations of bootloader-configuration.
* guix/scripts/system.scm (perform-action): Rename device argument to
bootloader-target.
(process-action): Adapt caller.
* doc/guix.texi (Proceeding with the Installation):
* doc/guix.texi (Bootloader Configuration): Update documentation.
2017-08-23 22:23:19 +02:00
Efraim Flashner f81039058c
gnu: qemu: Fix CVE-2017-12809.
* gnu/packages/virtualization.scm (qemu)[source]: Add patch.
* gnu/packages/patches/qemu-CVE-2017-12809.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2017-08-23 21:56:55 +03:00
Efraim Flashner f00e328fd3
gnu: openjpeg: Fix CVE-2017-12982.
* gnu/packages/image.scm (openjepg)[source]: Add patch.
* gnu/packages/patches/openjpeg-CVE-2017-12982.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2017-08-23 21:07:07 +03:00
Ricardo Wurmus d7eea7d7ae
gnu: python-scikit-learn: Update to 0.19.0.
* gnu/packages/python.scm (python-scikit-learn): Update to 0.19.0.
2017-08-23 17:31:54 +02:00
Rutger Helling cc527b5048
gnu: xpra: Update to 2.1.1.
* gnu/packages/xorg.scm (xpra): Update to 2.1.1.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2017-08-23 20:38:09 +08:00
Rutger Helling 8a7f958ed9
gnu: higan: Update to 104.
* gnu/packages/games.scm (higan): Update to 104.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2017-08-23 20:24:15 +08:00
Rutger Helling 56cdca9537
gnu: retroarch: Update to 1.6.7.
* gnu/packages/games.scm (retroarch): Update to 1.6.7.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2017-08-23 20:13:41 +08:00
Thomas Danckaert 35e657017c
gnu: id3lib: Remove bundled zlib.
* gnu/packages/mp3.scm (id3lib)[source]: Remove bundled zlib.
[inputs]: Add zlib.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2017-08-23 19:58:26 +08:00
Christopher Baines c075c8fd0c
tests: Add 'libvirt-service-type' test.
* gnu/tests/virtualization.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2017-08-23 12:48:11 +01:00
Ryan Moe e6051057ab
services: Add libvirt services
* gnu/services/virtualization.scm: New file.
* doc/guix.texi (Virtualization Services): Document it.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2017-08-23 12:47:24 +01:00
Christopher Baines 903e051a71
gnu: libvirt: Wrap with iproute and qemu.
libvirtd runs qemu if it's configured to use it, and also uses the ip command.

* gnu/packages/virtualization.scm (libvirt)[arguments]: Add wrap-libvirtd
  phase.
2017-08-23 12:44:21 +01:00
Christopher Baines 0577a3fd92
gnu: Build the shared library for yaml-cpp.
* gnu/packages/serialization.scm (yaml-cpp)[arguments]: Add
  -DBUILD_SHARED_LIBS=ON to #:configure-flags.
2017-08-23 10:07:22 +01:00
Ludovic Courtès 7d14082d56
services: herd: Actions return a list of results.
Fixes a regression introduced in
0642838b2e.

* gnu/services/herd.scm (invoke-action): Explain that we get a list of
results.
(current-services): Expect a list of result and use the first one.
(unload-service, %load-file, eval-there): Likewise.
2017-08-23 00:29:22 +02:00
Marius Bakke 4e58740aff
gnu: whois: Update to 5.2.18.
* gnu/packages/networking.scm (whois): Update to 5.2.18.
2017-08-22 23:17:14 +02:00
Marius Bakke 2e4569829e
gnu: Add f2fs-tools.
* gnu/packages/linux.scm (f2fs-tools): New variable.
2017-08-22 23:13:42 +02:00
Marius Bakke 7ac2cab8c9
gnu: Add icedtea-web.
* gnu/packages/java.scm (icedtea-web): New variable.
2017-08-22 23:02:13 +02:00
ng0 77a0354a36
gnu: gnurl: Update to 7.55.1-3.
* gnu/packages/gnunet.scm (gnurl): Update to 7.55.1-3.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2017-08-22 21:52:05 +02:00
Christopher Baines 39fc3004be
web: Remove the nginx-service procedure.
Now that the service-type has a default value, and configuration record is
accessible.

* gnu/services/web.scm (nginx-service): Remove procedure.
* doc/guix.texi (Web Services): Update and improve NGinx documentation.
2017-08-22 17:49:05 +01:00
Christopher Baines ad4cc435e8
web: Add default-value for the nginx-service-type.
* gnu/services/web.scm (nginx-service-type)[default-value]:
  Use (nginx-configuration).
2017-08-22 17:49:00 +01:00
Christopher Baines e4b729f89c
web: Export more nginx related procedures, macros and record types.
This makes it possible to work with the configuration of the NGinx service
programatically.

* gnu/services/web.scm (<nginx-configuration>, <nginx-server-configuration>,
  <nginx-upstream-configuration>, <nginx-location-configuration>,
  <nginx-named-location-configuration>): Export NGinx related record
  types.
  (nginx-configuration-*, nginx-server-configuration-*,
  nginx-upstream-configuration-*, nginx-location-configuration-*,
  nginx-named-location-configuration-*): Export NGinx related record
  procedures.
  (nginx-configuration): Export NGinx related record macro.
2017-08-22 17:48:54 +01:00
Ricardo Wurmus bd3a184613
gnu: r-minimal: Do not compress serialized files.
* gnu/packages/statistics.scm (r-minimal)[arguments]: Replace build phase
"patch-which" with "do-not-compress-serialized-files".
[propagated-inputs]: Move "which" from here...
[inputs]: ...to here.

Fixes <https://bugs.gnu.org/28157>.
2017-08-22 16:24:24 +02:00
Ricardo Wurmus 6be54a8751
gnu: Add rmath-standalone.
* gnu/packages/statistics.scm (rmath-standalone): New variable.
2017-08-22 16:24:24 +02:00
Efraim Flashner 94b179c675
gnu: gst-plugins-bad: Build with wayland support.
* gnu/packages/gstreamer.scm (gst-plugins-bad)[inputs]: Add wayland.
2017-08-22 17:04:39 +03:00
Efraim Flashner fe535d81ae
gnu: libraw: Update to 0.18.2.
* gnu/packages/photo.scm (libraw): Update to 0.18.2.
[source, home-page]: Use https.
2017-08-22 16:57:59 +03:00
Z. Ren 0e4d822e3f
gnu: skalibs: Build reproducibly.
* gnu/packages/skarnet.scm (skalibs)[arguments]: Add #:phases.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-08-22 15:19:49 +02:00
Ludovic Courtès c15374e03d
gnu: libjpeg-turbo: Build reproducibly.
* gnu/packages/image.scm (libjpeg-turbo)[arguments]: Add #:configure-flags.

Co-authored-by: Z. Ren <zren@dlut.edu.cn>
2017-08-22 15:19:49 +02:00
Thomas Danckaert 1206c95a49
gnu: python-netcdf4: Update to 1.2.9.
* gnu/packages/python.scm (python-netcdf4): Update to 1.2.9.
2017-08-22 09:02:32 +02:00
Thomas Danckaert 5c78db6222
gnu: python-h5py: Update to 2.7.0.
* gnu/packages/python.scm (python-h5py): Update to 2.7.0.
2017-08-22 09:02:24 +02:00
Efraim Flashner 285e18e9ae
gnu: terminology: Update to 1.1.0.
* gnu/packages/enlightenment.scm (terminology): Update to 1.1.0.
[source]: Remove bundled fonts and references to them.
[native-inputs]: Add gettext-minimal.
2017-08-22 09:49:27 +03:00
Oleg Pykhalov 61b31ac46f
gnu: Update emacs-rainbow-mode to 0.13.
* gnu/packages/emacs.scm (emacs-rainbow-mode): Update to 0.13.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-08-22 00:00:56 +02:00
Oleg Pykhalov 86a9b1633c
gnu: python-internetarchive: Update to 1.7.1.
* gnu/packages/web.scm (python-internetarchive): Update to 1.7.1.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-08-22 00:00:56 +02:00
Tobias Geerinckx-Rice 58f3d45996
gnu: python-marshmallow: Update to 3.0.0b3.
* gnu/packages/python.scm (python-marshmallow): Update to 3.0.0b3.
2017-08-21 22:54:38 +02:00
Tobias Geerinckx-Rice 4ecab114fd
gnu: python-pylast: Update to 1.9.0.
* gnu/packages/python.scm (python-pylast): Update to 1.9.0.
2017-08-21 22:54:38 +02:00
Tobias Geerinckx-Rice 3592a57255
gnu: lollypop: Update to 0.9.244.
* gnu/packages/gnome.scm (lollypop): Update to 0.9.244.
2017-08-21 22:54:37 +02:00
Tobias Geerinckx-Rice 9f9d2a723f
gnu: gspell: Update to 1.4.2.
* gnu/packages/gnome.scm (gspell): Update to 1.4.2.
2017-08-21 22:54:37 +02:00
Marius Bakke 3ce16aeac5
gnu: imagemagick: Update to 6.9.9-9.
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.9-9.
2017-08-21 22:48:44 +02:00
Marius Bakke 51eecee7b9
gnu: feh: Update to 2.19.3.
* gnu/packages/image-viewers.scm (feh): Update to 2.19.3.
2017-08-21 22:48:44 +02:00
Tobias Geerinckx-Rice 88648855f8
gnu: perl-net-dns: Update to 1.12.
* gnu/packages/networking.scm (perl-net-dns): Update to 1.12.
2017-08-21 17:38:08 +02:00
Tobias Geerinckx-Rice 46057c0a3f
gnu: zstd: Update to 1.3.1.
* gnu/packages/compression.scm (zstd): Update to 1.3.1.
2017-08-21 17:38:07 +02:00
Dave Love 6c171ff47c
gnu: openmpi: Configure without vampirtrace.
VT is obsoleted by scorep (not currently packaged) and disabling it reduces
the closure considerably.

* mpi.scm (openmpi)[arguments]: Configure without vampirtrace.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-08-21 17:04:54 +02:00
Dave Love df981d8b36
gnu: openmpi: Modify configuration to reduce closure.
devel-headers are only for building MCA components, produce a large
closure and aren't normally packaged.  Only the affinity component of
mpi-ext is useful.

* gnu/packages/mpi.scm (openmpi)[arguments]: Don't configure
--with-devel-headers and --enable-mpi-ext=all.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-08-21 17:04:54 +02:00
Dave Love 0d97d3cbff
gnu: openmpi: Remove references to compiler pathnames in "_info" programs.
This reduces the closure greatly, but note that the Fortran .mod files are
gfortran version-specific, so there should probably be development packages
for each incompatible version.  (The runtime is supposed to be more-or-less
version-independent unless the libgfortran soname changes.)  There may still
be a case for a separate runtime output.

* gnu/packages/mpi.scm (openmpi)[arguments]: Add "remove-absolute" phase.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2017-08-21 17:04:54 +02:00
Dave Love 84bf845abc
gnu: valgrind: Add separate "doc" output.
* gnu/packages/valgrind.scm (valgrind)[outputs]: New field.
[arguments]: Add 'install-doc' phase.

Co-authored-by: Ludovic Courtès <ludovic.courtes@inria.fr>
2017-08-21 17:04:54 +02:00
Dave Love 327404aeaa
gnu: openmpi: Remove "static" output.
--enable-static removes dynamically-loaded MCA components.

* gnu/packages/mpi.scm (openmpi)[outputs]: Remove field.
[arguments]: Don't configure with --enable-static; remove
'move-static-libraries' phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-08-21 17:04:54 +02:00
Dave Love 685bef2bd1
gnu: openmpi: Add separate variant with thread-multiple support.
* gnu/packages/mpi.scm (openmpi)[arguments]: Remove
"--enable-mpi-thread-multiple".
(openmpi-thread-multiple): New variable.

Signed-off-by: Ludovic Courtès <ludovic.courtes@inria.fr>
2017-08-21 17:04:54 +02:00
Theodoros Foradis cf684d87d7
gnu: z3: Build Python bindings.
* gnu/packages/maths.scm (z3): Add python bindings.
[build-system]: Change to cmake-build-system.
[arguments]: Remove "changedir" phase.  Add "bootstrap" and
"make-test-z3" phases; replace the "check" phase.
Add #:configure-flags.  Remove #:test-target.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-08-21 17:04:53 +02:00
Efraim Flashner bd2e321061
gnu: augeas: Update to 1.8.1. Fixes CVE-2017-7555.
* gnu/packages/augeas.scm (augeas): Update to 1.8.1.
2017-08-21 16:02:23 +03:00
Marius Bakke 2718a9cd09
Merge branch 'master' into core-updates 2017-08-21 02:40:37 +02:00
ng0 e904de7ec1
gnu: gnurl: Update to 7.55.1.
* gnu/packages/gnunet.scm (gnurl): Update to 7.55.1.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2017-08-21 01:05:06 +02:00
Efraim Flashner 1dbd34329b
gnu: vifm: Update to 0.9.
* gnu/packages/vim.scm (vifm): Update to 0.9.
[source]: Add alternate uri.
[arguments]: Remove build timestamp. Add phase to install vim plugins
into vim plugin directory. Patch more shebangs.
2017-08-20 23:23:17 +03:00
Efraim Flashner bda6c35093
gnu: pspp: Update to 1.0.0.
* gnu/packages/statistics.scm (pspp): Update to 1.0.0.
2017-08-20 21:44:47 +03:00